>MYO9B_MOUSE (Q9QY06) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
Length = 2114
Score = 46.2 bits (108), Expect = 8e-05
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRR 588
L QAAV QAA+RGYL R+A+ + IIRLQ+L RGHL RR
Sbjct: 999 LERTQAAVYLQAAWRGYLQRQAYHHQRHSIIRLQSLCRGHLQRR 1042
Score = 33.5 bits (75), Expect = 0.55
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 397 NGSAMENMVRIGSDVQISPEK---LREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALI 567
+G + ++++ S ++ E+ ++ + AA+ QA +R Y RRA + + LQA
Sbjct: 953 HGEVLRRILQLQSWFRMVLERKHFVQMKHAALTIQACWRSYRVRRALERTQAAVYLQAAW 1012
Query: 568 RGHLVRRQAVSTLRATWLIVKFQAL 642
RG+L +RQA R + I++ Q+L
Sbjct: 1013 RGYL-QRQAYHHQRHS--IIRLQSL 1034
>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
Length = 2158
Score = 44.3 bits (103), Expect = 3e-04
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRR 588
L QAAV QAA+RGY R+ +R K IIRLQ+L RGHL R+
Sbjct: 999 LERTQAAVYLQAAWRGYWQRKLYRHQKQSIIRLQSLCRGHLQRK 1042
Score = 33.5 bits (75), Expect = 0.55
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGH----LVRRQAVSTLR 609
L+ ++AAV QA +R Y RRA + + LQA RG+ L R Q S +R
Sbjct: 977 LQMKRAAVTIQACWRSYRVRRALERTQAAVYLQAAWRGYWQRKLYRHQKQSIIR 1030
>ASPM_SAGLB (P62295) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 1527
Score = 38.1 bits (87), Expect = 0.022
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVSTLRATWLI 624
LR+ +AV QAAFRG RR +++ +R+Q+ R LVRR+ +S +A I
Sbjct: 975 LRQRHSAVILQAAFRGMKTRRHLKSMHSSAVRIQSRFRSLLVRRRFISLKKAAIFI 1030
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 475 AAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGHLVRRQAVSTLRATWLIVK 630
AAVK Q+AFRGY R +++ L+ II++Q R + + +S +R +L K
Sbjct: 420 AAVKIQSAFRGYSKRVRYQSVLQSIIKIQRWYRAY----KTLSDIRTHFLKTK 468
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
L+ ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 392 LQVKKAATCLQAAYRGYKVRQLIKQQSIAAVKIQSAFRGYSKRVRYQSVLQS---IIKIQ 448
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 3371
Score = 37.0 bits (84), Expect = 0.049
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 445 ISPEKLRE-EQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWL 621
I K RE + + +K QA +R + AR+ R +K R+QA R RR+ ++ LRA +
Sbjct: 2839 IQKRKFRELKDSTIKIQAVWRRHKARKYLREVKAACRIQAWYRCWKARREYLAVLRAVRI 2898
Query: 622 I 624
I
Sbjct: 2899 I 2899
Score = 34.7 bits (78), Expect = 0.25
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 12/56 (21%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGI------------IRLQALIRGHLVRRQ 591
LR ++A VK Q+ R LAR+ + L+ I I+LQA +RG+LVR+Q
Sbjct: 1608 LRLKKATVKLQSIVRMKLARKQYLHLRAIAQQREEHRRASCIKLQAFLRGYLVRKQ 1663
Score = 32.3 bits (72), Expect = 1.2
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 442 QISPEKLREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWL 621
++ + +E +AAVK Q+AFR A++ FR LK ++I+ HL R A R +
Sbjct: 1805 KVRKQMRKEHEAAVKIQSAFRTARAQKEFRVLK---TAASVIQQHLRARAAGRRQRTEYT 1861
Query: 622 IVKFQAL 642
++ A+
Sbjct: 1862 ALRRAAV 1868
Score = 31.6 bits (70), Expect = 2.1
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
++ AA+K QAAFRGY R +++ L+ +++Q R H + VS +R+ + + A
Sbjct: 1739 QQSAAALKIQAAFRGYRQRTKYQSVLQSALKIQRWYRTH----KTVSAIRSHFFKTRTAA 1794
Query: 640 L 642
+
Sbjct: 1795 I 1795
Score = 31.6 bits (70), Expect = 2.1
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
L++ AA++ QAAFRG AR R +K LQ+ R +R+ + L I++ QA
Sbjct: 1467 LQKRAAAIRLQAAFRGRRARNLCRQIKAACVLQSYWR---MRQDRLRFLNLKKNIIRLQA 1523
Score = 30.8 bits (68), Expect = 3.5
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 454 EKLREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRA 612
E+ + +AAV Q AFR + RR + + +R+Q+ ++ + RR+ + RA
Sbjct: 2725 EQHSQRKAAVTIQKAFRKMVTRRLEKQRRAAVRIQSFLQMAVYRRRFLQQKRA 2777
Score = 30.4 bits (67), Expect = 4.6
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 454 EKLREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVR 585
++LR ++AA+K Q+ +RG++ R+ + + + LQA R H R
Sbjct: 2223 QQLRLQKAAIKIQSWYRGWMVRKKIQEMRRAATVLQAAFRRHRTR 2267
>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein|
homolog
Length = 3479
Score = 36.2 bits (82), Expect = 0.084
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRL-QALIRGHLVRRQAVSTLRAT 615
LR+ ++AV QAAFRG RR +++ L Q+ R LVRR+ +S +AT
Sbjct: 2382 LRQRRSAVILQAAFRGVKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKAT 2434
Score = 30.4 bits (67), Expect = 4.6
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
LR ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 1799 LRVKKAATCLQAAYRGYKVRQLIKQQSIAALKIQSAFRGYNKRVKYQSVLQS---IIKIQ 1855
>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein|
homolog
Length = 3476
Score = 36.2 bits (82), Expect = 0.084
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRL-QALIRGHLVRRQAVSTLRAT 615
LR+ ++AV QAAFRG RR +++ L Q+ R LVRR+ +S +AT
Sbjct: 2382 LRQRRSAVILQAAFRGVKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKAT 2434
Score = 30.4 bits (67), Expect = 4.6
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
LR ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 1799 LRVKKAATCLQAAYRGYKVRQLIKQQSIAALKIQSAFRGYNKRVKYQSVLQS---IIKIQ 1855
>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein|
homolog
Length = 3469
Score = 35.8 bits (81), Expect = 0.11
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVSTLRATWLI 624
LR+ +AV QAAFRG RR +++ I +Q+ R LVRR+ +S +A I
Sbjct: 2373 LRQRHSAVILQAAFRGMETRRRLKSMHSSAILIQSRFRSLLVRRRFISLKKAAIFI 2428
Score = 30.4 bits (67), Expect = 4.6
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGH 576
++ AAVK Q+AFRGY R +++ L+ II++Q R +
Sbjct: 1814 QQSVAAVKIQSAFRGYSKRVKYQSVLQSIIKIQRWYRAY 1852
Score = 29.6 bits (65), Expect = 7.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAF-RALKGIIRLQALIRGHLV-RRQAVSTLRATWLIVKF 633
++ QAA QA FRGY R+ F R + +Q IR RR+ + + V
Sbjct: 3019 IQRHQAACLIQAHFRGYKGRQVFLRQKSAALNIQKYIRAREAGRRERIKYIELKKSTVTL 3078
Query: 634 QAL 642
QAL
Sbjct: 3079 QAL 3081
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
L+ ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 1790 LQVKKAATCLQAAYRGYKVRQLIKQQSVAAVKIQSAFRGYSKRVKYQSVLQS---IIKIQ 1846
>ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associated protein|
homolog
Length = 3477
Score = 35.8 bits (81), Expect = 0.11
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRL-QALIRGHLVRRQAVSTLRAT 615
LR+ +AV QAAFRG RR +++ L Q+ R LVRR+ +S +AT
Sbjct: 2382 LRQRHSAVILQAAFRGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKAT 2434
Score = 30.4 bits (67), Expect = 4.6
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
LR ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 1799 LRVKKAATCLQAAYRGYKIRQLIKQQSIAAVKIQSAFRGYNKRVKYQSVLQS---IIKIQ 1855
Score = 29.6 bits (65), Expect = 7.9
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 475 AAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGH 576
AAVK Q+AFRGY R +++ L+ II++Q R +
Sbjct: 1827 AAVKIQSAFRGYNKRVKYQSVLQSIIKIQRWYRAY 1861
>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein|
homolog
Length = 3473
Score = 35.8 bits (81), Expect = 0.11
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVSTLRATWLI 624
LR+ +AV QAAFRG RR +++ I +Q+ R LVRR+ +S +A I
Sbjct: 2378 LRQRHSAVILQAAFRGMKTRRHLKSMHSSAILIQSRFRSLLVRRRFISLKKAAIFI 2433
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 475 AAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGHLVRRQAVSTLRATWLIVK 630
AAVK Q+AFRGY R +++ L+ II++Q R + + +S +R +L K
Sbjct: 1823 AAVKIQSAFRGYRKRVKYQSVLQSIIKIQRWYRAY----KTLSDIRTHFLKTK 1871
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
L+ ++AA QAA+RGY R+ + +++Q+ RG+ R + S L++ I+K Q
Sbjct: 1795 LQVKKAATCLQAAYRGYKVRQLIKQQSIAAVKIQSAFRGYRKRVKYQSVLQS---IIKIQ 1851
>ASPM_SHEEP (P62297) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 3374
Score = 35.0 bits (79), Expect = 0.19
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 445 ISPEKLRE-EQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWL 621
I K R+ + + +K QA +R + AR+ R +K R+QA R R++ ++ LRA +
Sbjct: 2842 IQKRKFRKLKDSTIKIQAVWRRHKARKYLREVKAACRIQAWYRCRKARKEYLAVLRAVRI 2901
Query: 622 I 624
I
Sbjct: 2902 I 2902
Score = 33.1 bits (74), Expect = 0.71
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGI------------IRLQALIRGHLVRRQAVST 603
LR ++A VK Q+ R AR+ + L+ I I+LQA +RG+LVR+Q
Sbjct: 1611 LRLKKATVKLQSIVRMKQARKQYLHLRAIAQQREEHLRASCIKLQAFLRGYLVRKQVRLQ 1670
Query: 604 LRATWLIVKF 633
+A L+ +
Sbjct: 1671 RKAAVLLQSY 1680
Score = 32.7 bits (73), Expect = 0.93
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
Frame = +1
Query: 442 QISPEKLREEQAAVKAQAAFRGYLARRAFRALK---GIIR--LQALIRG------HLVRR 588
++ + +E +AAVK Q+AFR A++ FR LK +I+ L+A G ++ R
Sbjct: 1808 KVRKQMRKEHEAAVKIQSAFRTARAQKEFRLLKTAASVIQQHLRARATGLRQRTEYMALR 1867
Query: 589 QAVSTLRATW 618
+A TL++ W
Sbjct: 1868 RAAVTLQSAW 1877
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAFRA-LKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
++ AA+K QAAFRGY R +++ L+ +++Q R R+ VS LR+ + + A
Sbjct: 1742 QQSAAALKIQAAFRGYRQRTKYQSMLQSALKIQRWYR----TRKMVSALRSHFFKTRTAA 1797
Query: 640 L 642
+
Sbjct: 1798 I 1798
Score = 30.4 bits (67), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 472 QAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLI 624
QAA+ Q+ FRG+ ARR + + R+Q+ R H R + RA +I
Sbjct: 2585 QAAICIQSCFRGFKARRGIQGMHLAATRIQSCYRRHRARADYQAKKRAVVVI 2636
Score = 30.4 bits (67), Expect = 4.6
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 454 EKLREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVSTLRATWLI 624
++L+ ++AA+K Q+ +RG++ R+ + + + LQA R H R + + RA+ +I
Sbjct: 2226 QQLQLQKAAIKIQSWYRGWMVRKKTQEMRRAATVLQAAFRRHRARARYQAWRRASQVI 2283
>ASPM_ATEGE (P62284) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 1564
Score = 34.7 bits (78), Expect = 0.25
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLI 624
LR+ +AV QAAFRG RR +++ I +Q+ R LVRR+ +S +A I
Sbjct: 1020 LRQRYSAVILQAAFRGMKTRRHLKSMYFSAILIQSRFRSLLVRRRFISLKKAAIFI 1075
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
LR ++AA QAA+RGY R+ + +++Q+ RG+ R + +S L++ I+K Q
Sbjct: 437 LRVKKAATCLQAAYRGYKVRQLIKQQSVAAVKIQSAFRGYSKRVKYLSVLQS---IIKIQ 493
Score = 30.0 bits (66), Expect = 6.0
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAFRALKGII-----RLQALIRGHLVR------RQAVSTLR 609
RE QAA+K Q+AFR A++ FR K L+A I G R R +V L+
Sbjct: 534 REHQAAMKIQSAFRMAKAQKQFRLFKTAALVIQQHLRAWIAGRKQRMEYIELRHSVLMLQ 593
Query: 610 ATW 618
+ W
Sbjct: 594 SMW 596
Score = 29.6 bits (65), Expect = 7.9
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLAR-RAFRALKGIIRLQALIRGH 576
++ AAVK Q+AFRGY R + L+ II++Q R +
Sbjct: 461 QQSVAAVKIQSAFRGYSKRVKYLSVLQSIIKIQRWYRAY 499
>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 3461
Score = 32.7 bits (73), Expect = 0.93
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 469 EQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWLI 624
+ + +K QAA+R Y AR+ +K ++QA R R++ ++ L+A +I
Sbjct: 2934 KDSTIKIQAAWRSYKARKYLCKVKAACKIQAWYRSWKARKEYLAILKAVKVI 2985
Score = 32.7 bits (73), Expect = 0.93
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVSTLRA 612
LR+ +A+ QAAFR ARR + + + +Q+ RG +VR++ VS +A
Sbjct: 2384 LRQRHSALILQAAFRSMKARRHLKMMHSSAVLIQSRFRGLVVRKRFVSLKKA 2435
Score = 32.7 bits (73), Expect = 0.93
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAF-RALKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
+ A + Q+A+RG ARR F L II++Q+ R ++ R++ + AT VK Q+
Sbjct: 1632 KTRSAVIVLQSAYRGMQARRKFIHILTSIIKIQSYYRAYISRKKFLRLKHAT---VKLQS 1688
Query: 640 L 642
+
Sbjct: 1689 I 1689
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
L++ AA++ QAAFRG AR R ++ Q+ R +RR L + +K QA
Sbjct: 1536 LQKRAAAIQLQAAFRGMKARNLHRQIRAACVFQSYWR---MRRDRFRFLNLKKITIKLQA 1592
>ASPM_MOUSE (Q8CJ27) Abnormal spindle-like microcephaly-associated protein|
homolog (Calmodulin-binding protein 1) (Spindle and
hydroxyurea checkpoint abnormal protein)
(Calmodulin-binding protein Sha1)
Length = 3122
Score = 32.3 bits (72), Expect = 1.2
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 28/90 (31%)
Frame = +1
Query: 454 EKLREEQAAVKAQAAFRGYLARRAF--------------RAL--------------KGII 549
E L+ +AA QA FRGY AR++F RA+ K +
Sbjct: 2670 ENLKRHRAACVIQAHFRGYQARQSFLQQRSAVLIIQRHVRAMVAAKQERIKYIKLKKSTV 2729
Query: 550 RLQALIRGHLVRRQAVSTLRATWLIVKFQA 639
+QAL+RG LVR++ VS +A + F A
Sbjct: 2730 VVQALVRGWLVRKR-VSEQKAKTRLFHFTA 2758
Score = 30.8 bits (68), Expect = 3.5
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKG-IIRLQALIRGHLVRRQAVSTLRATWLIVKFQ 636
L++ A ++ QAAFRG AR ++R G LQ+ R +R++ V L +++K Q
Sbjct: 1502 LQKRAATIRLQAAFRGMKARHSYRLQIGAACVLQSYWR---MRQERVRFLNLKKMVIKLQ 1558
Query: 637 A 639
A
Sbjct: 1559 A 1559
Score = 29.6 bits (65), Expect = 7.9
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 439 VQISPEKLREEQAAVKAQAAFRGYLARRAFRALKGIIRL-QALIRGHLVRRQAVSTLRAT 615
V + E R++ AAV QAA RG R + + L Q+ R +VRR+ ++ +A
Sbjct: 2334 VHTAAELQRQKHAAVILQAAVRGMKTRSHLKTMHSSATLIQSQFRAFIVRRRFIALRKAA 2393
Query: 616 WLIV-KFQA 639
+ KF+A
Sbjct: 2394 IFVQRKFRA 2402
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 442 QISPEK--LREEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRGHLVRRQAVSTLRA 612
QIS K L+ ++AA+ QAA+RG RR + + +Q + RGH R + + L++
Sbjct: 1759 QISQRKNFLQVKRAAICLQAAYRGCKVRRQIKQQSTAAVTIQRVFRGHSQRMKYQTMLQS 1818
>ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associated protein|
homolog (Fragment)
Length = 3452
Score = 31.2 bits (69), Expect = 2.7
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Frame = +1
Query: 463 REEQAAVKAQAAFRGYLARRAFRALK-GIIRLQALIRG----------HLVRRQAVSTLR 609
RE QAAV+ Q+AFR A++ F+ LK + +Q +R ++ R+A L+
Sbjct: 1888 RERQAAVRIQSAFRMAKAQKQFKLLKTAALVIQQHLRAWTAGKRQRMEYIELREAALRLQ 1947
Query: 610 ATW 618
+TW
Sbjct: 1948 STW 1950
Score = 30.0 bits (66), Expect = 6.0
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 460 LREEQAAVKAQAAFRGYLARRAFRALKGIIRL-QALIRGHLVRRQAVSTLRAT 615
L++ +A+ QAAFRG AR + + L Q+ R +VR++ +S RAT
Sbjct: 2375 LQQRHSALILQAAFRGMKARGHLKNMHSSATLIQSTFRSLVVRKRFISLKRAT 2427
>INVS_CANFA (Q6JAN1) Inversin (Inversion of embryo turning protein)|
(Nephrocystin-2)
Length = 1081
Score = 29.6 bits (65), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 466 EEQAAVKAQAAFRGYLARRAFRALKGIIRLQALIR 570
++ AA K QA ++GY R+AFR K ++ +R
Sbjct: 555 QDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLR 589
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,033,008
Number of Sequences: 219361
Number of extensions: 2234998
Number of successful extensions: 7533
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 6814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7511
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)