ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469815.1| Oryza sativa (japonica cultivar-group), mRNA 682 0.0
2ref|XM_507071.1| PREDICTED Oryza sativa (japonica cultivar-group... 682 0.0
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 682 0.0
4gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom... 682 0.0
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 682 0.0
6dbj|AK111668.1| Oryza sativa (japonica cultivar-group) cDNA clon... 682 0.0
7gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 648 0.0
8ref|XM_479065.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-16
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
10dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
11dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
12dbj|AK100000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
13ref|XM_806015.1| Trypanosoma cruzi strain CL Brener serine/threo... 54 6e-04
14ref|XM_807774.1| Trypanosoma cruzi strain CL Brener serine/threo... 54 6e-04
15gb|AY687390.1| Glycine max putative receptor-like protein kinase... 44 0.54
16gb|AC163657.3| Mus musculus BAC clone RP24-302A24 from chromosom... 42 2.1
17gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, com... 42 2.1
18gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, comp... 42 2.1
19gb|AC099776.2| Homo sapiens chromosome 3 clone RP11-280I3, compl... 42 2.1
20gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 42 2.1
21ref|XM_466142.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
22ref|XM_476509.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
23gb|BT018976.1| Zea mays clone Contig405.F mRNA sequence 40 8.4
24gb|AF016686.1| Caenorhabditis elegans cosmid R07C3, complete seq... 40 8.4
25gb|AY295076.1| Beta vulgaris subsp. vulgaris mitogen-activated p... 40 8.4
26gb|AC140329.3| Mus musculus BAC clone RP23-404O10 from chromosom... 40 8.4
27gb|AC134573.5| Mus musculus BAC clone RP23-460N10 from chromosom... 40 8.4
28gb|AF121229.1| Botryotinia fuckeliana aspartic proteinase precur... 40 8.4
29ref|XR_002698.1| PREDICTED: Mus musculus similar to Heat shock p... 40 8.4
30ref|XR_004922.1| PREDICTED: Mus musculus similar to Heat shock p... 40 8.4
31gb|AY352047.1| Catharanthus roseus 10-hydroxygeraniol oxidoreduc... 40 8.4
32emb|AL451072.14| Human DNA sequence from clone RP1-236H13 on chr... 40 8.4
33gb|AC145203.1| Homo sapiens chromosome 19 clone XXfos-800752H11,... 40 8.4
34emb|CR559943.6| Zebrafish DNA sequence from clone CH211-200O8 in... 40 8.4
35gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, complet... 40 8.4
36ref|NM_061448.2| Caenorhabditis elegans R07C3.8 (R07C3.8) mRNA, ... 40 8.4
37emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, ... 40 8.4
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
43gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complet... 40 8.4
44gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D14... 40 8.4
45dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
46dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
47dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
48dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
49dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
50dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
52dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
53dbj|AK100955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
54dbj|AK069491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
55gb|AY109898.1| Zea mays CL11607_1 mRNA sequence 40 8.4
56dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
57emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on ch... 40 8.4
58gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
59emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.4
60gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipie... 40 8.4

>ref|XM_469815.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3744

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Plus

                                                                        
Query: 11   caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 2229 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 2288

                                                                        
Query: 71   tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
            |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2289 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 2348

                                                                        
Query: 131  aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
            |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 2349 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 2408

                                                                        
Query: 191  aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
            ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 2409 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 2468

                                                                        
Query: 251  tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
            |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2469 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 2528

                                                                        
Query: 311  caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
             |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 2529 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 2588

                                                                        
Query: 371  tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
            ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 2589 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 2648

                                                                        
Query: 431  tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
            |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 2649 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 2708

                                                                        
Query: 491  caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
             ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 2709 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 2767

                                                                        
Query: 551  aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
            |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 2768 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 2825



to top

>ref|XM_507071.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0081K01.8
            patrial mRNA
          Length = 4315

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Plus

                                                                        
Query: 11   caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 2229 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 2288

                                                                        
Query: 71   tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
            |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2289 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 2348

                                                                        
Query: 131  aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
            |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 2349 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 2408

                                                                        
Query: 191  aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
            ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 2409 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 2468

                                                                        
Query: 251  tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
            |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2469 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 2528

                                                                        
Query: 311  caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
             |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 2529 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 2588

                                                                        
Query: 371  tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
            ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 2589 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 2648

                                                                        
Query: 431  tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
            |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 2649 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 2708

                                                                        
Query: 491  caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
             ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 2709 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 2767

                                                                        
Query: 551  aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
            |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 2768 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 2825



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Minus

                                                                            
Query: 11       caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
                |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 30906105 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 30906046

                                                                            
Query: 71       tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
                |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 30906045 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 30905986

                                                                            
Query: 131      aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
                |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 30905985 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 30905926

                                                                            
Query: 191      aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
                ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 30905925 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 30905866

                                                                            
Query: 251      tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
                |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 30905865 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 30905806

                                                                            
Query: 311      caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
                 |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 30905805 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 30905746

                                                                            
Query: 371      tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
                ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 30905745 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 30905686

                                                                            
Query: 431      tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
                |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 30905685 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 30905626

                                                                            
Query: 491      caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
                 ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 30905625 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 30905567

                                                                            
Query: 551      aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
                |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 30905566 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 30905509



to top

>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
             sequence
          Length = 122496

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Plus

                                                                         
Query: 11    caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
             |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 36985 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 37044

                                                                         
Query: 71    tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
             |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 37045 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 37104

                                                                         
Query: 131   aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
             |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 37105 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 37164

                                                                         
Query: 191   aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
             ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 37165 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 37224

                                                                         
Query: 251   tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
             |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 37225 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 37284

                                                                         
Query: 311   caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
              |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 37285 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 37344

                                                                         
Query: 371   tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
             ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 37345 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 37404

                                                                         
Query: 431   tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
             |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 37405 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 37464

                                                                         
Query: 491   caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
              ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 37465 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 37523

                                                                         
Query: 551   aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
             |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 37524 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 37581



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Minus

                                                                            
Query: 11       caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
                |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 30996628 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 30996569

                                                                            
Query: 71       tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
                |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 30996568 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 30996509

                                                                            
Query: 131      aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
                |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 30996508 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 30996449

                                                                            
Query: 191      aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
                ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 30996448 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 30996389

                                                                            
Query: 251      tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
                |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 30996388 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 30996329

                                                                            
Query: 311      caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
                 |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 30996328 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 30996269

                                                                            
Query: 371      tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
                ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 30996268 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 30996209

                                                                            
Query: 431      tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
                |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 30996208 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 30996149

                                                                            
Query: 491      caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
                 ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 30996148 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 30996090

                                                                            
Query: 551      aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
                |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 30996089 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 30996032



to top

>dbj|AK111668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153P21, full
            insert sequence
          Length = 4499

 Score =  682 bits (344), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 3/600 (0%)
 Strand = Plus / Plus

                                                                        
Query: 11   caggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgt 70
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 2389 caggagaagggaagtgactgtttttgtggatattggtgctccattgacgtatgagactgt 2448

                                                                        
Query: 71   tgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagc 130
            |||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2449 tgtacgtgctacggggagttttaatgcaagcaattgtattggaagtggtggctttggagc 2508

                                                                        
Query: 131  aacatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgg 190
            |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || |||||
Sbjct: 2509 aacatacaaagctgagattgcacctggagttctggtggcgataaagaggcttgcgattgg 2568

                                                                        
Query: 191  aaggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggca 250
            ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 2569 aaggttccaaggtattcagcaattccaagcagaggtaaaaactcttgggaggtgccgcca 2628

                                                                        
Query: 251  tgacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatata 310
            |  ||||||||| ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2629 tcccaatcttgtgacactcataggataccatctcagtgattcagagatgtttcttatata 2688

                                                                        
Query: 311  caattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgat 370
             |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||
Sbjct: 2689 taattttcttcctggtggtaatttggaaagatttatacaagaaagggctaagagacctat 2748

                                                                        
Query: 371  tgattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttca 430
            ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||
Sbjct: 2749 tgactggagaatgcttcacaaaattgctctagatattgcacgtgcacttggattccttca 2808

                                                                        
Query: 431  tgataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcga 490
            |||||  ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 2809 tgatagctgtgtcccacgcattctgcaccgagacgtgaaaccaagcaacattttacttga 2868

                                                                        
Query: 491  caatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcag 550
             ||||| |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 2869 taatgaatacaatgcatacctttctga-ttttggattagcaagactactcgggaattcag 2927

                                                                        
Query: 551  aaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgc 610
            |||| || |||| || | ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 2928 aaacacacgcaa-caactggtgtagcaggtactttt-ggatatgttgctccagagtatgc 2985



to top

>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score =  648 bits (327), Expect = 0.0
 Identities = 537/603 (89%), Gaps = 3/603 (0%)
 Strand = Plus / Minus

                                                                         
Query: 12    aggagaagggaagtgactgtttttgtggatattggtgctcctttgacatatgagaccgtt 71
             |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| |||
Sbjct: 74914 aggagaagggaagtcactgtttttgttgatatcggtgctcccttgacatatgagactgtt 74855

                                                                         
Query: 72    gtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggtggctttggagca 131
              |||| ||   ||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 74854 ttacgtgccagtggaagcttcaatgcaagtaattgcattggaagtggtggctttggagca 74795

                                                                         
Query: 132   acatacaaagctgagattgcaccaggcattctggtggcaataaagaggctcgctattgga 191
             || |||||||||||| | |||||||| |   ||||||||||||||||||| |||||||||
Sbjct: 74794 acgtacaaagctgaggtcgcaccaggaaaattggtggcaataaagaggcttgctattgga 74735

                                                                         
Query: 192   aggttccaaggtattcagcagttccaagcagaggtgaaaactcttggaaggtgtcggcat 251
             || |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 74734 agattccaaggcattcagcagttccaagcagaggtcaaaacacttgggaggtgtcgccat 74675

                                                                         
Query: 252   gacaatcttgtaacactcatagggtaccacctcagtgattcagagatgttcctaatatac 311
               ||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| 
Sbjct: 74674 cccaatcttgtaacactcataggataccatctcagcgattcagagatgtttctaatatat 74615

                                                                         
Query: 312   aattttctgcctggtggtaacttggaaaggttcatacaagaaaggacaaagagaccgatt 371
             ||||||||||||||||| || |||||||||||||||||||||||||  |||||||| |||
Sbjct: 74614 aattttctgcctggtggcaatttggaaaggttcatacaagaaaggagtaagagaccaatt 74555

                                                                         
Query: 372   gattggagaatgcttcacaaaattgctctagatgttgcacgtgcacttgcatatcttcat 431
             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 74554 gattggagaatgcttcacaaaattgctctagatgttgcgcgtgcacttgcatatctccat 74495

                                                                         
Query: 432   gataattgtgtcccacgcattctgcaccgggatgtgaagccaagcaacatcttgctcgac 491
             || |||||||||||||||||  ||||| ||||||| || ||||| ||||| ||||| |||
Sbjct: 74494 gacaattgtgtcccacgcatcttgcacagggatgtcaaaccaagtaacatattgcttgac 74435

                                                                         
Query: 492   aatgagtacactgcatacctttctgatttttgggttagcaagactacttgggaattcaga 551
             |||||  ||||||||||||||||||| |||||| |||||||| || ||||| ||||||||
Sbjct: 74434 aatgatcacactgcatacctttctga-ttttggattagcaaggctgcttggaaattcaga 74376

                                                                         
Query: 552   aactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccagagtatgcg 611
             ||| |||||||||| | || || || |||||||||||| ||||| |||||||||||||||
Sbjct: 74375 aacacatgcaacca-ctggcgtggcaggtacttttggg-tatgtagctccagagtatgcg 74318

                
Query: 612   atg 614
             |||
Sbjct: 74317 atg 74315



to top

>ref|XM_479065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3665

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                        
Query: 60   tatgagaccgttgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggt 119
            |||||||| ||||| || ||  |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 2569 tatgagactgttgttcgagcaactgggagtttcaatgcgagcaattgcattggaagtggg 2628

                                                                        
Query: 120  ggctttggagcaacatacaaagctgagattgcaccaggcattctggtggcaataaagagg 179
            ||||||||||| || || |||||||| ||| |||| ||  |  |||| || |||||||||
Sbjct: 2629 ggctttggagccacttataaagctgaaatttcacctggagtgttggtagctataaagagg 2688

                                                                    
Query: 180  ctcgctattggaaggttccaaggtattcagcagttccaagcagaggtgaaaactct 235
            ||| || |||| || ||||||||| |||| ||||| || || ||| | ||||||||
Sbjct: 2689 ctctctgttgggagattccaaggtgttcaacagtttcatgctgagattaaaactct 2744



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 414  gcacttgcatatcttcatgataattgtgtcccacgcattctgcaccgggatgtgaagcca 473
            |||||||| ||||| ||||||| |||||| || || || || ||||| |||||||| |||
Sbjct: 2923 gcacttgcttatctgcatgatacttgtgttcctcgtatccttcaccgtgatgtgaaacca 2982

                    
Query: 474  agcaacat 481
            ||||||||
Sbjct: 2983 agcaacat 2990



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                        
Query: 544  aattcagaaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccag 603
            ||||||||||| |||||||||||  ||||| || || |||||||| ||||||||||||||
Sbjct: 3052 aattcagaaacccatgcaaccact-ggtgtagctgggacttttgg-atatgttgctccag 3109

                   
Query: 604  agtatgc 610
            | |||||
Sbjct: 3110 aatatgc 3116



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                            
Query: 60       tatgagaccgttgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggt 119
                |||||||| ||||| || ||  |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 24570051 tatgagactgttgttcgagcaactgggagtttcaatgcgagcaattgcattggaagtggg 24570110

                                                                            
Query: 120      ggctttggagcaacatacaaagctgagattgcaccaggcattctggtggcaataaagagg 179
                ||||||||||| || || |||||||| ||| |||| ||  |  |||| || |||||||||
Sbjct: 24570111 ggctttggagccacttataaagctgaaatttcacctggagtgttggtagctataaagagg 24570170

                                                                        
Query: 180      ctcgctattggaaggttccaaggtattcagcagttccaagcagaggtgaaaactct 235
                ||| || |||| || ||||||||| |||| ||||| || || ||| | ||||||||
Sbjct: 24570171 ctctctgttgggagattccaaggtgttcaacagtttcatgctgagattaaaactct 24570226



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 414      gcacttgcatatcttcatgataattgtgtcccacgcattctgcaccgggatgtgaagcca 473
                |||||||| ||||| ||||||| |||||| || || || || ||||| |||||||| |||
Sbjct: 24570405 gcacttgcttatctgcatgatacttgtgttcctcgtatccttcaccgtgatgtgaaacca 24570464

                        
Query: 474      agcaacat 481
                ||||||||
Sbjct: 24570465 agcaacat 24570472



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                            
Query: 544      aattcagaaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccag 603
                ||||||||||| |||||||||||  ||||| || || |||||||| ||||||||||||||
Sbjct: 24570534 aattcagaaacccatgcaaccact-ggtgtagctgggacttttgg-atatgttgctccag 24570591

                       
Query: 604      agtatgc 610
                | |||||
Sbjct: 24570592 aatatgc 24570598



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     gatgtgaagccaagcaacat 481
               ||||||||||||||||||||
Sbjct: 1616357 gatgtgaagccaagcaacat 1616338



to top

>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                         
Query: 60    tatgagaccgttgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggt 119
             |||||||| ||||| || ||  |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 26118 tatgagactgttgttcgagcaactgggagtttcaatgcgagcaattgcattggaagtggg 26177

                                                                         
Query: 120   ggctttggagcaacatacaaagctgagattgcaccaggcattctggtggcaataaagagg 179
             ||||||||||| || || |||||||| ||| |||| ||  |  |||| || |||||||||
Sbjct: 26178 ggctttggagccacttataaagctgaaatttcacctggagtgttggtagctataaagagg 26237

                                                                     
Query: 180   ctcgctattggaaggttccaaggtattcagcagttccaagcagaggtgaaaactct 235
             ||| || |||| || ||||||||| |||| ||||| || || ||| | ||||||||
Sbjct: 26238 ctctctgttgggagattccaaggtgttcaacagtttcatgctgagattaaaactct 26293



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 414   gcacttgcatatcttcatgataattgtgtcccacgcattctgcaccgggatgtgaagcca 473
             |||||||| ||||| ||||||| |||||| || || || || ||||| |||||||| |||
Sbjct: 26472 gcacttgcttatctgcatgatacttgtgttcctcgtatccttcaccgtgatgtgaaacca 26531

                     
Query: 474   agcaacat 481
             ||||||||
Sbjct: 26532 agcaacat 26539



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                         
Query: 544   aattcagaaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccag 603
             ||||||||||| |||||||||||  ||||| || || |||||||| ||||||||||||||
Sbjct: 26601 aattcagaaacccatgcaaccact-ggtgtagctgggacttttgg-atatgttgctccag 26658

                    
Query: 604   agtatgc 610
             | |||||
Sbjct: 26659 aatatgc 26665



to top

>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018H10
          Length = 135879

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                         
Query: 60    tatgagaccgttgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggt 119
             |||||||| ||||| || ||  |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 63345 tatgagactgttgttcgagcaactgggagtttcaatgcgagcaattgcattggaagtggg 63404

                                                                         
Query: 120   ggctttggagcaacatacaaagctgagattgcaccaggcattctggtggcaataaagagg 179
             ||||||||||| || || |||||||| ||| |||| ||  |  |||| || |||||||||
Sbjct: 63405 ggctttggagccacttataaagctgaaatttcacctggagtgttggtagctataaagagg 63464

                                                                     
Query: 180   ctcgctattggaaggttccaaggtattcagcagttccaagcagaggtgaaaactct 235
             ||| || |||| || ||||||||| |||| ||||| || || ||| | ||||||||
Sbjct: 63465 ctctctgttgggagattccaaggtgttcaacagtttcatgctgagattaaaactct 63520



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 414   gcacttgcatatcttcatgataattgtgtcccacgcattctgcaccgggatgtgaagcca 473
             |||||||| ||||| ||||||| |||||| || || || || ||||| |||||||| |||
Sbjct: 63699 gcacttgcttatctgcatgatacttgtgttcctcgtatccttcaccgtgatgtgaaacca 63758

                     
Query: 474   agcaacat 481
             ||||||||
Sbjct: 63759 agcaacat 63766



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                         
Query: 544   aattcagaaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccag 603
             ||||||||||| |||||||||||  ||||| || || |||||||| ||||||||||||||
Sbjct: 63828 aattcagaaacccatgcaaccact-ggtgtagctgggacttttgg-atatgttgctccag 63885

                    
Query: 604   agtatgc 610
             | |||||
Sbjct: 63886 aatatgc 63892



to top

>dbj|AK100000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N21, full
            insert sequence
          Length = 3666

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                        
Query: 60   tatgagaccgttgtacgcgctgctggcagttttaatgcaagcaattgcattggaagtggt 119
            |||||||| ||||| || ||  |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 2569 tatgagactgttgttcgagcaactgggagtttcaatgcgagcaattgcattggaagtggg 2628

                                                                        
Query: 120  ggctttggagcaacatacaaagctgagattgcaccaggcattctggtggcaataaagagg 179
            ||||||||||| || || |||||||| ||| |||| ||  |  |||| || |||||||||
Sbjct: 2629 ggctttggagccacttataaagctgaaatttcacctggagtgttggtagctataaagagg 2688

                                                                    
Query: 180  ctcgctattggaaggttccaaggtattcagcagttccaagcagaggtgaaaactct 235
            ||| || |||| || ||||||||| |||| ||||| || || ||| | ||||||||
Sbjct: 2689 ctctctgttgggagattccaaggtgttcaacagtttcatgctgagattaaaactct 2744



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 414  gcacttgcatatcttcatgataattgtgtcccacgcattctgcaccgggatgtgaagcca 473
            |||||||| ||||| ||||||| |||||| || || || || ||||| |||||||| |||
Sbjct: 2923 gcacttgcttatctgcatgatacttgtgttcctcgtatccttcaccgtgatgtgaaacca 2982

                    
Query: 474  agcaacat 481
            ||||||||
Sbjct: 2983 agcaacat 2990



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                        
Query: 544  aattcagaaactcatgcaaccacccggtgtcgcgggtacttttgggatatgttgctccag 603
            ||||||||||| |||||||||||  ||||| || || |||||||| ||||||||||||||
Sbjct: 3052 aattcagaaacccatgcaaccact-ggtgtagctgggacttttgg-atatgttgctccag 3109

                   
Query: 604  agtatgc 610
            | |||||
Sbjct: 3110 aatatgc 3116



to top

>ref|XM_806015.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase
           (Tc00.1047053511395.90) partial mRNA
          Length = 1686

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 454 tgcaccgggatgtgaagccaagcaacatctt 484
           ||||||||||||||||||| |||||||||||
Sbjct: 362 tgcaccgggatgtgaagcccagcaacatctt 392



to top

>ref|XM_807774.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase
           (Tc00.1047053505071.30) partial mRNA
          Length = 1686

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 454 tgcaccgggatgtgaagccaagcaacatctt 484
           ||||||||||||||||||| |||||||||||
Sbjct: 362 tgcaccgggatgtgaagcccagcaacatctt 392



to top

>gb|AY687390.1| Glycine max putative receptor-like protein kinase 3 mRNA, complete
            cds
          Length = 2085

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Plus

                                              
Query: 577  gggtacttttgggatatgttgctccagagtatgc 610
            |||||||||||| ||||||||||||||| |||||
Sbjct: 1251 gggtacttttgg-atatgttgctccagaatatgc 1283



to top

>gb|AC163657.3| Mus musculus BAC clone RP24-302A24 from chromosome 1, complete sequence
          Length = 197913

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 540    tgggaattcagaaactcatgc 560
              |||||||||||||||||||||
Sbjct: 179054 tgggaattcagaaactcatgc 179074



to top

>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 540   tgggaattcagaaactcatgc 560
             |||||||||||||||||||||
Sbjct: 36653 tgggaattcagaaactcatgc 36673



to top

>gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, complete sequence
          Length = 247848

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     aacaggagaagggaagtgact 29
             |||||||||||||||||||||
Sbjct: 70852 aacaggagaagggaagtgact 70872



to top

>gb|AC099776.2| Homo sapiens chromosome 3 clone RP11-280I3, complete sequence
          Length = 171347

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    ttaatgcaagcaattgcattg 111
             |||||||||||||||||||||
Sbjct: 68931 ttaatgcaagcaattgcattg 68911



to top

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 494    tgagtacactgcatacctttc 514
              |||||||||||||||||||||
Sbjct: 850388 tgagtacactgcatacctttc 850368



to top

>ref|XM_466142.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2039

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  tatgttgctccagagtatgc 610
            ||||||||||||||||||||
Sbjct: 1327 tatgttgctccagagtatgc 1346



to top

>ref|XM_476509.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 462  gatgtgaagccaagcaacat 481
            ||||||||||||||||||||
Sbjct: 1426 gatgtgaagccaagcaacat 1445



to top

>gb|BT018976.1| Zea mays clone Contig405.F mRNA sequence
          Length = 1524

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 tatgttgctccagagtatgc 610
           ||||||||||||||||||||
Sbjct: 337 tatgttgctccagagtatgc 356



to top

>gb|AF016686.1| Caenorhabditis elegans cosmid R07C3, complete sequence
          Length = 40254

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  agtggtggctttggagcaac 133
            ||||||||||||||||||||
Sbjct: 8399 agtggtggctttggagcaac 8418



to top

>gb|AY295076.1| Beta vulgaris subsp. vulgaris mitogen-activated protein kinase
           mRNA, partial cds
          Length = 337

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 451 ttctgcaccgggatgtgaagccaagcaa 478
           |||||||||||||| |||| ||||||||
Sbjct: 194 ttctgcaccgggatctgaaaccaagcaa 221



to top

>gb|AC140329.3| Mus musculus BAC clone RP23-404O10 from chromosome 14, complete
             sequence
          Length = 202811

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ctcagtgattcagagatgtt 301
             ||||||||||||||||||||
Sbjct: 59022 ctcagtgattcagagatgtt 59003



to top

>gb|AC134573.5| Mus musculus BAC clone RP23-460N10 from chromosome 7, complete sequence
          Length = 177808

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    agggaagtgactgtttttgt 37
             ||||||||||||||||||||
Sbjct: 84438 agggaagtgactgtttttgt 84457



to top

>gb|AF121229.1| Botryotinia fuckeliana aspartic proteinase precursor (AP1) gene,
           complete cds
          Length = 2076

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 ttgcattggaagtggtggctttgg 127
           ||||||||||||| ||||||||||
Sbjct: 646 ttgcattggaagttgtggctttgg 623



to top

>ref|XR_002698.1| PREDICTED: Mus musculus similar to Heat shock protein HSP 90-beta
            (HSP 84) (Tumor-specific transplantation 84 kDa antigen)
            (TSTA) (LOC629758), mRNA
          Length = 2222

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  ttggagaatgcttcacaaaa 393
            ||||||||||||||||||||
Sbjct: 1350 ttggagaatgcttcacaaaa 1331



to top

>ref|XR_004922.1| PREDICTED: Mus musculus similar to Heat shock protein HSP 90-beta
            (HSP 84) (Tumor-specific transplantation 84 kDa antigen)
            (TSTA) (LOC676452), mRNA
          Length = 2225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  ttggagaatgcttcacaaaa 393
            ||||||||||||||||||||
Sbjct: 1350 ttggagaatgcttcacaaaa 1331



to top

>gb|AY352047.1| Catharanthus roseus 10-hydroxygeraniol oxidoreductase mRNA,
           complete cds
          Length = 1324

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  tggatattggtgctcctttg 56
           ||||||||||||||||||||
Sbjct: 533 tggatattggtgctcctttg 552



to top

>emb|AL451072.14| Human DNA sequence from clone RP1-236H13 on chromosome 6, complete
            sequence
          Length = 4913

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  agaatgcttcacaaaattgc 397
            ||||||||||||||||||||
Sbjct: 2564 agaatgcttcacaaaattgc 2583



to top

>gb|AC145203.1| Homo sapiens chromosome 19 clone XXfos-800752H11, complete sequence
          Length = 41422

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   aaagctgagattgcaccagg 157
             ||||||||||||||||||||
Sbjct: 38814 aaagctgagattgcaccagg 38795



to top

>emb|CR559943.6| Zebrafish DNA sequence from clone CH211-200O8 in linkage group 13,
             complete sequence
          Length = 147505

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   agccaagcaacatcttgctc 488
             ||||||||||||||||||||
Sbjct: 31991 agccaagcaacatcttgctc 31972



to top

>gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, complete sequence
          Length = 192059

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gaagggaagtgactgttttt 35
             ||||||||||||||||||||
Sbjct: 45326 gaagggaagtgactgttttt 45345



to top

>ref|NM_061448.2| Caenorhabditis elegans R07C3.8 (R07C3.8) mRNA, complete cds
          Length = 1184

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 agtggtggctttggagcaac 133
           ||||||||||||||||||||
Sbjct: 389 agtggtggctttggagcaac 408



to top

>emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, complete sequence
          Length = 169110

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    agccaagcaacatcttgctc 488
              ||||||||||||||||||||
Sbjct: 133447 agccaagcaacatcttgctc 133466



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 468      aagccaagcaacatcttgctcgac 491
                ||||||||||||||| ||||||||
Sbjct: 25744789 aagccaagcaacatcatgctcgac 25744766



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 468      aagccaagcaacatcttgctcgac 491
                ||||||||||||||| ||||||||
Sbjct: 10428522 aagccaagcaacatcatgctcgac 10428545



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 468      aagccaagcaacatcttgctcgac 491
                ||||||||||||||| ||||||||
Sbjct: 10103889 aagccaagcaacatcatgctcgac 10103912



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ctcatgcaaccacccggtgt 573
              ||||||||||||||||||||
Sbjct: 232030 ctcatgcaaccacccggtgt 232011



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 591      tatgttgctccagagtatgc 610
                ||||||||||||||||||||
Sbjct: 20644511 tatgttgctccagagtatgc 20644530



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 554      ctcatgcaaccacccggtgt 573
                ||||||||||||||||||||
Sbjct: 36892455 ctcatgcaaccacccggtgt 36892474



to top

>gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complete sequence
          Length = 183783

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    cactgcatacctttctgatt 519
              ||||||||||||||||||||
Sbjct: 103975 cactgcatacctttctgatt 103956



to top

>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence
          Length = 44117

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 395   tgctctagatgttgcacgtgcacttgca 422
             ||||||||||||||||  ||||||||||
Sbjct: 21518 tgctctagatgttgcagttgcacttgca 21491



to top

>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1096A10
          Length = 150976

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    ctcatgcaaccacccggtgt 573
              ||||||||||||||||||||
Sbjct: 108033 ctcatgcaaccacccggtgt 108052



to top

>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1104_G11
          Length = 140093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 468    aagccaagcaacatcttgctcgac 491
              ||||||||||||||| ||||||||
Sbjct: 136227 aagccaagcaacatcatgctcgac 136250



to top

>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0448B03
          Length = 147748

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 468   aagccaagcaacatcttgctcgac 491
             ||||||||||||||| ||||||||
Sbjct: 28901 aagccaagcaacatcatgctcgac 28924



to top

>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0466E03
          Length = 138343

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 468    aagccaagcaacatcttgctcgac 491
              ||||||||||||||| ||||||||
Sbjct: 133193 aagccaagcaacatcatgctcgac 133216



to top

>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0015C07
          Length = 149079

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ctcatgcaaccacccggtgt 573
              ||||||||||||||||||||
Sbjct: 147365 ctcatgcaaccacccggtgt 147346



to top

>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0088O14
          Length = 179483

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   gatgtgaagccaagcaacat 481
             ||||||||||||||||||||
Sbjct: 85012 gatgtgaagccaagcaacat 84993



to top

>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1253_E02
          Length = 166645

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 468   aagccaagcaacatcttgctcgac 491
             ||||||||||||||| ||||||||
Sbjct: 63567 aagccaagcaacatcatgctcgac 63590



to top

>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0040I22
          Length = 134273

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   tatgttgctccagagtatgc 610
             ||||||||||||||||||||
Sbjct: 41366 tatgttgctccagagtatgc 41385



to top

>dbj|AK100955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140A19, full
            insert sequence
          Length = 3427

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 468  aagccaagcaacatcttgctcgac 491
            ||||||||||||||| ||||||||
Sbjct: 2659 aagccaagcaacatcatgctcgac 2682



to top

>dbj|AK069491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025B09, full
            insert sequence
          Length = 2039

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  tatgttgctccagagtatgc 610
            ||||||||||||||||||||
Sbjct: 1327 tatgttgctccagagtatgc 1346



to top

>gb|AY109898.1| Zea mays CL11607_1 mRNA sequence
          Length = 1000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 tatgttgctccagagtatgc 610
           ||||||||||||||||||||
Sbjct: 244 tatgttgctccagagtatgc 263



to top

>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0483E09
          Length = 69300

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   gatgtgaagccaagcaacat 481
             ||||||||||||||||||||
Sbjct: 25510 gatgtgaagccaagcaacat 25491



to top

>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete
             sequence
          Length = 230213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ctttggagcaacatacaaag 141
             ||||||||||||||||||||
Sbjct: 72802 ctttggagcaacatacaaag 72821



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 468      aagccaagcaacatcttgctcgac 491
                ||||||||||||||| ||||||||
Sbjct: 25672965 aagccaagcaacatcatgctcgac 25672942



to top

>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 468    aagccaagcaacatcttgctcgac 491
              ||||||||||||||| ||||||||
Sbjct: 112027 aagccaagcaacatcatgctcgac 112004



to top

>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940122D9, complete sequence
          Length = 114898

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   gaagccaagcaacatcttgc 486
             ||||||||||||||||||||
Sbjct: 27247 gaagccaagcaacatcttgc 27266


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,522,157
Number of Sequences: 3902068
Number of extensions: 5522157
Number of successful extensions: 122762
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 122199
Number of HSP's gapped (non-prelim): 539
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top