ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 7e-50
2dbj|AK068678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 7e-50
3dbj|AK066955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
4gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 2e-22
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7ref|XM_816900.1| Trypanosoma cruzi strain CL Brener mucin-associ... 52 0.003
8gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, comp... 44 0.62
9emb|BX548050.11| Zebrafish DNA sequence from clone DKEY-267D18 i... 44 0.62
10gb|AC109631.4| Homo sapiens chromosome , clone RP11-9J12, comple... 44 0.62
11emb|AL603747.5| Zebrafish DNA sequence from clone BUSM1-22B13 Co... 44 0.62
12ref|XM_363962.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.5
13gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence 42 2.5
14emb|CR394556.10| Zebrafish DNA sequence from clone DKEY-79P17 in... 42 2.5
15emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromo... 42 2.5
16emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chro... 42 2.5
17emb|AL596172.1| Listeria innocua Clip11262 complete genome, segm... 42 2.5
18gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance... 42 2.5
19emb|AJ324228.1|HSA324228 Homo sapiens genomic sequence surroundi... 42 2.5
20ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependen... 40 9.7
21gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
22ref|XM_640287.1| Dictyostelium discoideum hypothetical protein (... 40 9.7
23ref|XM_635886.1| Dictyostelium discoideum hypothetical protein (... 40 9.7
24gb|AC102458.8| Mus musculus chromosome 1, clone RP24-312N11, com... 40 9.7
25gb|AF236106.1| Drosophila melanogaster receptor protein tyrosine... 40 9.7
26emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in... 40 9.7
27ref|XM_537233.2| PREDICTED: Canis familiaris similar to CG5986-P... 40 9.7
28gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, comp... 40 9.7
29emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L... 40 9.7
30emb|BX914198.13| Zebrafish DNA sequence from clone DKEY-7I21 in ... 40 9.7
31gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, com... 40 9.7
32gb|AC155291.3| Mus musculus BAC clone RP24-439M20 from chromosom... 40 9.7
33dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 9.7
34gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, comp... 40 9.7
35gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, comple... 40 9.7
36gb|AC083755.10| Homo sapiens chromosome 11, clone RP11-175E18, c... 40 9.7
37ref|XM_624436.1| PREDICTED: Apis mellifera similar to NSD1 (LOC5... 40 9.7
38ref|XM_395687.2| PREDICTED: Apis mellifera similar to NSD1 (LOC4... 40 9.7
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
40gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098... 40 9.7
41gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, compl... 40 9.7
42dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.7
43dbj|AB013393.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.7
44dbj|AK101531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
45dbj|AK101190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
46gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, comple... 40 9.7
47gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-3... 40 9.7
48gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, com... 40 9.7
49gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) g... 40 9.7 
>dbj|AK104839.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F01, full
           insert sequence
          Length = 1335

 Score =  206 bits (104), Expect = 7e-50
 Identities = 245/292 (83%)
 Strand = Plus / Plus

                                                                       
Query: 175 gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
           |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 679 gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 738

                                                                       
Query: 235 ttccctatgttacagaaaaacgaactacaatccttcaagctcccacgccctgccctttgc 294
           ||||| ||||| ||| |||| |  ||||||||||||||||| || ||||| | |||||||
Sbjct: 739 ttccccatgttgcaggaaaatgtgctacaatccttcaagcttccgcgcccagtcctttgc 798

                                                                       
Query: 295 attggtggtgtgttgatgattgaactcttgggcagagtacagaaacaagaagcagatgat 354
           ||||||||| |  ||| | ||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 799 attggtggtatagtgaaggttgaactattgggcagagtacaaaaacaggaagcagatgat 858

                                                                       
Query: 355 atgtactacatatgtgtttgccatgttcaagtgttgggccgttcactctccccacttttc 414
           | ||||||||||||| | ||||||| |||||||   || |||||||| || ||| |||||
Sbjct: 859 aggtactacatatgtatctgccatgctcaagtgagagggcgttcactttctccagttttc 918

                                                               
Query: 415 atggttgacatctcggatcctgaaggtcattcaatcctcaagtacttaccgg 466
           |||||||| | ||| |||||||  ||| ||||| ||||||||||||| ||||
Sbjct: 919 atggttgatacctctgatcctgctggttattcagtcctcaagtacttgccgg 970



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 107/132 (81%)
 Strand = Plus / Plus

                                                                       
Query: 12  gtacaggctcaactctgacatctgcgttgtcgatgagattagggtgcggccgtaccaagc 71
           |||||||||||||| ||| || ||| | ||||||||||| | | ||| ||| | | ||||
Sbjct: 516 gtacaggctcaactgtgatatgtgcatcgtcgatgagatcaagctgcagccattcaaagc 575

                                                                       
Query: 72  cttttttcaggatgatgaccctatatactcttcaaagacggtgcgatttcggatgggcca 131
            | ||||||| |||   | |||||||||||||||||| | ||  |||| |||||||||||
Sbjct: 576 ttattttcagtatggacatcctatatactcttcaaaggcagtcagattccggatgggcca 635

                       
Query: 132 ttacaagcttcc 143
           || |||||||||
Sbjct: 636 ttccaagcttcc 647



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 517  tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
            |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 1021 tcgctggagtggcactcacttgttgctaggtacaggcggatga 1063
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>dbj|AK068678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158H22, full
           insert sequence
          Length = 997

 Score =  206 bits (104), Expect = 7e-50
 Identities = 245/292 (83%)
 Strand = Plus / Minus

                                                                       
Query: 175 gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
           |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 690 gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 631

                                                                       
Query: 235 ttccctatgttacagaaaaacgaactacaatccttcaagctcccacgccctgccctttgc 294
           ||||| ||||| ||| |||| |  ||||||||||||||||| || ||||| | |||||||
Sbjct: 630 ttccccatgttgcaggaaaatgtgctacaatccttcaagcttccgcgcccagtcctttgc 571

                                                                       
Query: 295 attggtggtgtgttgatgattgaactcttgggcagagtacagaaacaagaagcagatgat 354
           ||||||||| |  ||| | ||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 570 attggtggtatagtgaaggttgaactattgggcagagtacaaaaacaggaagcagatgat 511

                                                                       
Query: 355 atgtactacatatgtgtttgccatgttcaagtgttgggccgttcactctccccacttttc 414
           | ||||||||||||| | ||||||| |||||||   || |||||||| || ||| |||||
Sbjct: 510 aggtactacatatgtatctgccatgctcaagtgagagggcgttcactttctccagttttc 451

                                                               
Query: 415 atggttgacatctcggatcctgaaggtcattcaatcctcaagtacttaccgg 466
           |||||||| | ||| |||||||  ||| ||||| ||||||||||||| ||||
Sbjct: 450 atggttgatacctctgatcctgctggttattcagtcctcaagtacttgccgg 399



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 107/132 (81%)
 Strand = Plus / Minus

                                                                       
Query: 12  gtacaggctcaactctgacatctgcgttgtcgatgagattagggtgcggccgtaccaagc 71
           |||||||||||||| ||| || ||| | ||||||||||| | | ||| ||| | | ||||
Sbjct: 853 gtacaggctcaactgtgatatgtgcatcgtcgatgagatcaagctgcagccattcaaagc 794

                                                                       
Query: 72  cttttttcaggatgatgaccctatatactcttcaaagacggtgcgatttcggatgggcca 131
            | ||||||| |||   | |||||||||||||||||| | ||  |||| |||||||||||
Sbjct: 793 ttattttcagtatggacatcctatatactcttcaaaggcagtcagattccggatgggcca 734

                       
Query: 132 ttacaagcttcc 143
           || |||||||||
Sbjct: 733 ttccaagcttcc 722



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 517 tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
           |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 348 tcgctggagtggcactcacttgttgctaggtacaggcggatga 306
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>dbj|AK066955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C10, full
            insert sequence
          Length = 1478

 Score =  198 bits (100), Expect = 2e-47
 Identities = 244/292 (83%)
 Strand = Plus / Plus

                                                                        
Query: 175  gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
            |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 800  gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 859

                                                                        
Query: 235  ttccctatgttacagaaaaacgaactacaatccttcaagctcccacgccctgccctttgc 294
            ||||| ||||| ||| |||| |  ||||||||||||||||| || ||||| | |||||||
Sbjct: 860  ttccccatgttgcaggaaaatgtgctacaatccttcaagcttccgcgcccagtcctttgc 919

                                                                        
Query: 295  attggtggtgtgttgatgattgaactcttgggcagagtacagaaacaagaagcagatgat 354
            ||||||||| |  ||| | ||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 920  attggtggtatagtgaaggttgaactattgggcagagtacaaaaacaggaagcagatgat 979

                                                                        
Query: 355  atgtactacatatgtgtttgccatgttcaagtgttgggccgttcactctccccacttttc 414
            |  |||||||||||| | ||||||| |||||||   || |||||||| || ||| |||||
Sbjct: 980  agatactacatatgtatctgccatgctcaagtgagagggcgttcactttctccagttttc 1039

                                                                
Query: 415  atggttgacatctcggatcctgaaggtcattcaatcctcaagtacttaccgg 466
            |||||||| | ||| |||||||  ||| ||||| ||||||||||||| ||||
Sbjct: 1040 atggttgatacctctgatcctgctggttattcagtcctcaagtacttgccgg 1091



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 107/132 (81%)
 Strand = Plus / Plus

                                                                       
Query: 12  gtacaggctcaactctgacatctgcgttgtcgatgagattagggtgcggccgtaccaagc 71
           |||||||||||||| ||| || ||| | ||||||||||| | | ||| ||| | | ||||
Sbjct: 637 gtacaggctcaactgtgatatgtgcatcgtcgatgagatcaagctgcagccattcaaagc 696

                                                                       
Query: 72  cttttttcaggatgatgaccctatatactcttcaaagacggtgcgatttcggatgggcca 131
            | ||||||| |||   | |||||||||||||||||| | ||  |||| |||||||||||
Sbjct: 697 ttattttcagtatggacatcctatatactcttcaaaggcagtcagattccggatgggcca 756

                       
Query: 132 ttacaagcttcc 143
           || |||||||||
Sbjct: 757 ttccaagcttcc 768



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 517  tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
            |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 1142 tcgctggagtggcactcacttgttgctaggtacaggcggatga 1184
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>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0056G13, complete sequence
          Length = 148011

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 259   ctacaatccttcaagctcccacgccctgccctttgcattggtggtgtgttgatgattgaa 318
             ||||||||||||||||| || ||||| | |||||||||||||||| |  ||| | |||||
Sbjct: 82776 ctacaatccttcaagcttccgcgcccagtcctttgcattggtggtatagtgaaggttgaa 82835

                                                               
Query: 319   ctcttgggcagagtacagaaacaagaagcagatgatatgtactacatatg 368
             || |||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 82836 ctattgggcagagtacaaaaacaggaagcagatgataggtactacatatg 82885



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                         
Query: 373   tgccatgttcaagtgttgggccgttcactctccccacttttcatggttgacatctcggat 432
             ||||||| |||||||   || |||||||| || ||| ||||||||||||| | ||| |||
Sbjct: 83383 tgccatgctcaagtgagagggcgttcactttctccagttttcatggttgatacctctgat 83442

                                               
Query: 433   cctgaaggtcattcaatcctcaagtacttaccgg 466
             ||||  ||| ||||| ||||||||||||| ||||
Sbjct: 83443 cctgctggttattcagtcctcaagtacttgccgg 83476



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 91    cctatatactcttcaaagacggtgcgatttcggatgggccattacaagcttcc 143
             |||||||||||||||||| | ||  |||| ||||||||||||| |||||||||
Sbjct: 81826 cctatatactcttcaaaggcagtcagattccggatgggccattccaagcttcc 81878



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 175   gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
             |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 81910 gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 81969

                        
Query: 235   ttccctatgtt 245
             ||||| |||||
Sbjct: 81970 ttccccatgtt 81980



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 517   tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
             |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 83527 tcgctggagtggcactcacttgttgctaggtacaggcggatga 83569
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                          
Query: 259    ctacaatccttcaagctcccacgccctgccctttgcattggtggtgtgttgatgattgaa 318
              ||||||||||||||||| || ||||| | |||||||||||||||| |  ||| | |||||
Sbjct: 927579 ctacaatccttcaagcttccgcgcccagtcctttgcattggtggtatagtgaaggttgaa 927638

                                                                
Query: 319    ctcttgggcagagtacagaaacaagaagcagatgatatgtactacatatg 368
              || |||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 927639 ctattgggcagagtacaaaaacaggaagcagatgataggtactacatatg 927688



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                          
Query: 373    tgccatgttcaagtgttgggccgttcactctccccacttttcatggttgacatctcggat 432
              ||||||| |||||||   || |||||||| || ||| ||||||||||||| | ||| |||
Sbjct: 928186 tgccatgctcaagtgagagggcgttcactttctccagttttcatggttgatacctctgat 928245

                                                
Query: 433    cctgaaggtcattcaatcctcaagtacttaccgg 466
              ||||  ||| ||||| ||||||||||||| ||||
Sbjct: 928246 cctgctggttattcagtcctcaagtacttgccgg 928279



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 91     cctatatactcttcaaagacggtgcgatttcggatgggccattacaagcttcc 143
              |||||||||||||||||| | ||  |||| ||||||||||||| |||||||||
Sbjct: 926629 cctatatactcttcaaaggcagtcagattccggatgggccattccaagcttcc 926681



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                          
Query: 175    gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
              |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 926713 gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 926772

                         
Query: 235    ttccctatgtt 245
              ||||| |||||
Sbjct: 926773 ttccccatgtt 926783



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 517    tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
              |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 928330 tcgctggagtggcactcacttgttgctaggtacaggcggatga 928372
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                          
Query: 259    ctacaatccttcaagctcccacgccctgccctttgcattggtggtgtgttgatgattgaa 318
              ||||||||||||||||| || ||||| | |||||||||||||||| |  ||| | |||||
Sbjct: 927577 ctacaatccttcaagcttccgcgcccagtcctttgcattggtggtatagtgaaggttgaa 927636

                                                                
Query: 319    ctcttgggcagagtacagaaacaagaagcagatgatatgtactacatatg 368
              || |||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 927637 ctattgggcagagtacaaaaacaggaagcagatgataggtactacatatg 927686



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                          
Query: 373    tgccatgttcaagtgttgggccgttcactctccccacttttcatggttgacatctcggat 432
              ||||||| |||||||   || |||||||| || ||| ||||||||||||| | ||| |||
Sbjct: 928184 tgccatgctcaagtgagagggcgttcactttctccagttttcatggttgatacctctgat 928243

                                                
Query: 433    cctgaaggtcattcaatcctcaagtacttaccgg 466
              ||||  ||| ||||| ||||||||||||| ||||
Sbjct: 928244 cctgctggttattcagtcctcaagtacttgccgg 928277



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 91     cctatatactcttcaaagacggtgcgatttcggatgggccattacaagcttcc 143
              |||||||||||||||||| | ||  |||| ||||||||||||| |||||||||
Sbjct: 926627 cctatatactcttcaaaggcagtcagattccggatgggccattccaagcttcc 926679



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                          
Query: 175    gatgagaataagatggtaaatgctgaggaaaagtacatgtggacttacacttcgccagag 234
              |||||||||  ||||| || |||||| || || ||  |||||||||||||||| ||||||
Sbjct: 926711 gatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagag 926770

                         
Query: 235    ttccctatgtt 245
              ||||| |||||
Sbjct: 926771 ttccccatgtt 926781



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 517    tcgctggagtggcaccatcttgttgctagatacaggcagatga 559
              |||||||||||||||   ||||||||||| ||||||| |||||
Sbjct: 928328 tcgctggagtggcactcacttgttgctaggtacaggcggatga 928370
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>ref|XM_816900.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508221.210) partial mRNA
          Length = 876

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 630 agacgatgatcatgaagatgatgcaggtgg 659
           |||||||||| |||||||||||||||||||
Sbjct: 237 agacgatgatgatgaagatgatgcaggtgg 266



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 666 agacgatgatcatgaagatgatgtaggtgg 695
           |||||||||| |||||||||||| ||||||
Sbjct: 237 agacgatgatgatgaagatgatgcaggtgg 266
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>gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, complete sequence
          Length = 159236

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 290   tttgcattggtggtgtgttgat 311
             ||||||||||||||||||||||
Sbjct: 33137 tttgcattggtggtgtgttgat 33116
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>emb|BX548050.11| Zebrafish DNA sequence from clone DKEY-267D18 in linkage group 10,
              complete sequence
          Length = 208578

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 600    acattacatgcatgatgtgggt 621
              ||||||||||||||||||||||
Sbjct: 190813 acattacatgcatgatgtgggt 190792
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>gb|AC109631.4| Homo sapiens chromosome , clone RP11-9J12, complete sequence
          Length = 172321

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 290   tttgcattggtggtgtgttgat 311
             ||||||||||||||||||||||
Sbjct: 67458 tttgcattggtggtgtgttgat 67479
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>emb|AL603747.5| Zebrafish DNA sequence from clone BUSM1-22B13 Contains part of a novel
             gene for a lysophosphatidic acid receptor, a putative
             novel gene and a CpG island, complete sequence
          Length = 93867

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 600   acattacatgcatgatgtgggt 621
             ||||||||||||||||||||||
Sbjct: 61758 acattacatgcatgatgtgggt 61779
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>ref|XM_363962.1| Magnaporthe grisea 70-15 hypothetical protein (MG01889.4) partial
            mRNA
          Length = 3003

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 670  gatgatcatgaagatgatgta 690
            |||||||||||||||||||||
Sbjct: 1041 gatgatcatgaagatgatgta 1021
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>gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence
          Length = 118381

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    tatgttacagaaaaacgaact 260
              |||||||||||||||||||||
Sbjct: 116801 tatgttacagaaaaacgaact 116821
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>emb|CR394556.10| Zebrafish DNA sequence from clone DKEY-79P17 in linkage group 9, complete
              sequence
          Length = 136863

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 205    aagtacatgtggacttacact 225
              |||||||||||||||||||||
Sbjct: 125671 aagtacatgtggacttacact 125691
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>emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromosome 7, complete
             sequence
          Length = 141597

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   gatggtaaatgctgaggaaaa 206
             |||||||||||||||||||||
Sbjct: 53908 gatggtaaatgctgaggaaaa 53928
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>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part
             of the CRSP8 gene for subunit 8 of a cofactor required for
             Sp1 transcriptional activation and a CpG island, complete
             sequence
          Length = 77621

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 647   atgatgcaggtggcatctcag 667
             |||||||||||||||||||||
Sbjct: 63015 atgatgcaggtggcatctcag 62995
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>emb|AL596172.1| Listeria innocua Clip11262 complete genome, segment 10/12
          Length = 248050

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 338    aacaagaagcagatgatatgt 358
              |||||||||||||||||||||
Sbjct: 209743 aacaagaagcagatgatatgt 209723
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>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152599

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 566    gagcagcagtagtgagtgcacttct 590
              ||||||||||||||||||| |||||
Sbjct: 105244 gagcagcagtagtgagtgctcttct 105268
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>emb|AJ324228.1|HSA324228 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZG16C
          Length = 767

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 gaaggtcattcaatcctcaag 456
           |||||||||||||||||||||
Sbjct: 705 gaaggtcattcaatcctcaag 685
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>ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/
           nucleoside-triphosphatase/ nucleotide binding /
           serine-type endopeptidase/ serine-type p> AT5G47040
           mRNA, complete cds
          Length = 2704

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 668 acgatgatcatgaagatgatgtag 691
           |||||||| |||||||||||||||
Sbjct: 921 acgatgatgatgaagatgatgtag 944
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>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 596   ctgtacattacatgcatgatgtgg 619
             ||||| ||||||||||||||||||
Sbjct: 61476 ctgtatattacatgcatgatgtgg 61499
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>ref|XM_640287.1| Dictyostelium discoideum hypothetical protein (DDB0168617), partial
           mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 670 gatgatcatgaagatgatgtaggt 693
           |||||| |||||||||||||||||
Sbjct: 653 gatgatgatgaagatgatgtaggt 630
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>ref|XM_635886.1| Dictyostelium discoideum hypothetical protein (DDB0218270), partial
            mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  tttataattgatgatgatga 179
            ||||||||||||||||||||
Sbjct: 1235 tttataattgatgatgatga 1216
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>gb|AC102458.8| Mus musculus chromosome 1, clone RP24-312N11, complete sequence
          Length = 167263

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 671   atgatcatgaagatgatgta 690
             ||||||||||||||||||||
Sbjct: 22348 atgatcatgaagatgatgta 22329
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>gb|AF236106.1| Drosophila melanogaster receptor protein tyrosine kinase ALK splice
            variant A mRNA, complete cds
          Length = 8435

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 350  atgatatgtactacatatgtgttt 373
            |||||||||||||||||| |||||
Sbjct: 8325 atgatatgtactacatatatgttt 8348
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>emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in linkage group 17,
              complete sequence
          Length = 171764

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    tttataattgatgatgatga 179
              ||||||||||||||||||||
Sbjct: 147636 tttataattgatgatgatga 147655
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>ref|XM_537233.2| PREDICTED: Canis familiaris similar to CG5986-PA (LOC480111), mRNA
          Length = 1405

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 410 ttttcatggttgacatctcg 429
           ||||||||||||||||||||
Sbjct: 390 ttttcatggttgacatctcg 371
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>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence
          Length = 170074

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   gctggagtggcaccatcttg 538
             ||||||||||||||||||||
Sbjct: 20061 gctggagtggcaccatcttg 20080
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>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the
             5' end of the C20orf23 gene for a novel protein similar to
             KIF1 type and other kinesin-like proteins, the RPLP0P1
             gene for ribosomal protein large P0 pseudogene 1 and a CpG
             island, complete sequence
          Length = 119696

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gatgatgagaataagatggt 191
             ||||||||||||||||||||
Sbjct: 85601 gatgatgagaataagatggt 85582
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>emb|BX914198.13| Zebrafish DNA sequence from clone DKEY-7I21 in linkage group 3,
             complete sequence
          Length = 119178

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 634   gatgatcatgaagatgatgc 653
             ||||||||||||||||||||
Sbjct: 78579 gatgatcatgaagatgatgc 78598
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>gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, complete sequence
          Length = 176063

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   gctggagtggcaccatcttg 538
             ||||||||||||||||||||
Sbjct: 89060 gctggagtggcaccatcttg 89041
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>gb|AC155291.3| Mus musculus BAC clone RP24-439M20 from chromosome 12, complete
             sequence
          Length = 185156

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tttttcaggatgatgaccct 93
             ||||||||||||||||||||
Sbjct: 63354 tttttcaggatgatgaccct 63335
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 639     tcatgaagatgatgcaggtg 658
               ||||||||||||||||||||
Sbjct: 2962806 tcatgaagatgatgcaggtg 2962787
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>gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, complete sequence
          Length = 143494

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   agcagtagtgagtgcacttc 589
             ||||||||||||||||||||
Sbjct: 57735 agcagtagtgagtgcacttc 57754
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>gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, complete sequence
          Length = 173940

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tgatgatgatgagaataaga 187
             ||||||||||||||||||||
Sbjct: 84236 tgatgatgatgagaataaga 84255
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>gb|AC083755.10| Homo sapiens chromosome 11, clone RP11-175E18, complete sequence
          Length = 161755

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    atgatatgtactacatatgt 369
              ||||||||||||||||||||
Sbjct: 136616 atgatatgtactacatatgt 136635
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>ref|XM_624436.1| PREDICTED: Apis mellifera similar to NSD1 (LOC552057), partial mRNA
          Length = 1860

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 attgatgatgatgagaataa 185
           ||||||||||||||||||||
Sbjct: 87  attgatgatgatgagaataa 106
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>ref|XM_395687.2| PREDICTED: Apis mellifera similar to NSD1 (LOC412225), partial mRNA
          Length = 3088

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  attgatgatgatgagaataa 185
            ||||||||||||||||||||
Sbjct: 1342 attgatgatgatgagaataa 1361
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 596      ctgtacattacatgcatgatgtgg 619
                ||||| ||||||||||||||||||
Sbjct: 26680479 ctgtatattacatgcatgatgtgg 26680502
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>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4,
             complete sequence
          Length = 125623

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 670   gatgatcatgaagatgatgtaggt 693
             |||||| |||||||||||||||||
Sbjct: 98461 gatgatgatgaagatgatgtaggt 98484
to top
>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence
          Length = 116899

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 631   gacgatgatcatgaagatga 650
             ||||||||||||||||||||
Sbjct: 89586 gacgatgatcatgaagatga 89567



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 667   gacgatgatcatgaagatga 686
             ||||||||||||||||||||
Sbjct: 89586 gacgatgatcatgaagatga 89567
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>dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD22
          Length = 85661

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 668   acgatgatcatgaagatgatgtag 691
             |||||||| |||||||||||||||
Sbjct: 65006 acgatgatgatgaagatgatgtag 64983
to top
>dbj|AB013393.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE4
          Length = 63989

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    tttcaggatgatgaccctatatac 99
             |||||||||||||||| |||||||
Sbjct: 29523 tttcaggatgatgaccgtatatac 29500
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>dbj|AK101531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048A09, full
            insert sequence
          Length = 2378

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 596  ctgtacattacatgcatgatgtgg 619
            ||||| ||||||||||||||||||
Sbjct: 2316 ctgtatattacatgcatgatgtgg 2339
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>dbj|AK101190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F10, full
            insert sequence
          Length = 2378

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 596  ctgtacattacatgcatgatgtgg 619
            ||||| ||||||||||||||||||
Sbjct: 2316 ctgtatattacatgcatgatgtgg 2339
to top
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence
          Length = 163871

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    atatgtgtttgccatgttca 383
              ||||||||||||||||||||
Sbjct: 133310 atatgtgtttgccatgttca 133291
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>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete
             sequence
          Length = 93219

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   tgatgatgatgagaataaga 187
             ||||||||||||||||||||
Sbjct: 89573 tgatgatgatgagaataaga 89554
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>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence
          Length = 242324

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    agtggcaccatcttgttgct 543
              ||||||||||||||||||||
Sbjct: 146794 agtggcaccatcttgttgct 146775
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>gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) gene, complete cds
          Length = 6848

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 668  acgatgatcatgaagatgatgtag 691
            |||||||| |||||||||||||||
Sbjct: 3406 acgatgatgatgaagatgatgtag 3429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,453,959
Number of Sequences: 3902068
Number of extensions: 6453959
Number of successful extensions: 133399
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133130
Number of HSP's gapped (non-prelim): 269
length of query: 711
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 688
effective length of database: 17,143,297,704
effective search space: 11794588820352
effective search space used: 11794588820352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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