ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branche... 615 e-173
2emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (dr... 446 e-122
3ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 272 1e-69
4dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
5dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 151 3e-33
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
8gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
9gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
10ref|XM_467440.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.57
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
12dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
13dbj|AK107391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
14gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 42 2.3
15gb|AF547699.1| Lysimachia heterogenea internal transcribed space... 42 2.3
16emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 42 2.3
17gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 42 2.3
18gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 42 2.3
19gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, com... 42 2.3
20gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, com... 42 2.3
21gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, part... 42 2.3
22gb|AY048850.1| Halobacterium salinarum strain J7 plasmid pHH205,... 42 2.3
23gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete s... 42 2.3
24gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 42 2.3
25gb|AE004988.1| Halobacterium sp. NRC-1 section 19 of 170 of the ... 42 2.3
26gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, co... 40 8.9
27ref|XM_480381.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
28ref|XM_466433.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
29gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H1... 40 8.9
30gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 8.9
31gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.9
32gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, comple... 40 8.9
33ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase cla... 40 8.9
34gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complet... 40 8.9
35ref|XM_750819.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.9
36emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 8.9
37gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.9
38emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22... 40 8.9
39emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 40 8.9
40emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.9
41emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on ch... 40 8.9
42emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 ... 40 8.9
43gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 8.9
44gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 8.9
45gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 40 8.9
46gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete g... 40 8.9
47gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.9
48gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.9
49gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.9
50gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, compl... 40 8.9
51gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.9
52dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
53gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosom... 40 8.9
54gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complet... 40 8.9
55emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 40 8.9
56gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 8.9
57dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
58dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
59gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.9
60emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.9
61emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 40 8.9
62gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Canc... 40 8.9
63gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, co... 40 8.9
64gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 40 8.9
65dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
66gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, co... 40 8.9
67emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the... 40 8.9 
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  615 bits (310), Expect = e-173
 Identities = 310/310 (100%)
 Strand = Plus / Plus

                                                                        
Query: 334  aggcacgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcaca 393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 aggcacgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcaca 3979

                                                                        
Query: 394  tcgatccagatggggctggcagaggacaagaaaggatggacggtagcgattgattgattg 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3980 tcgatccagatggggctggcagaggacaagaaaggatggacggtagcgattgattgattg 4039

                                                                        
Query: 454  attaggaaaagagcatgggcgcatgcagcgccagaagcatccagtattgttttagtatta 513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4040 attaggaaaagagcatgggcgcatgcagcgccagaagcatccagtattgttttagtatta 4099

                                                                        
Query: 514  tctttgcaaatgtgaataattatcatggtgatcatatctcgcgctagaatttgaaagtta 573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 tctttgcaaatgtgaataattatcatggtgatcatatctcgcgctagaatttgaaagtta 4159

                                                                        
Query: 574  cgtgccccggtcatcagcggcttcaaatttgggcacggaaagaaatcgatctgcttgaca 633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 cgtgccccggtcatcagcggcttcaaatttgggcacggaaagaaatcgatctgcttgaca 4219

                      
Query: 634  cttatttgcc 643
            ||||||||||
Sbjct: 4220 cttatttgcc 4229



 Score =  396 bits (200), Expect = e-107
 Identities = 214/216 (99%), Gaps = 2/216 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagccgcagnatggacgcgaaa-gcaaggggttcgcggacgtgctgtacctggacgcggt 71
            ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3398 aagccgcag-atggacgcgaaaagcaaggggttcgcggacgtgctgtacctggacgcggt 3456

                                                                        
Query: 72   ccacaagaggtacgtcgaggaggcctcctcctgcaacctcttcgtcgtcaagggcggcgc 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 ccacaagaggtacgtcgaggaggcctcctcctgcaacctcttcgtcgtcaagggcggcgc 3516

                                                                        
Query: 132  cgtcgcgacgccggcgacgacggcagggaccatcctgccgggtgtcacgcgcaggagcat 191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 cgtcgcgacgccggcgacgacggcagggaccatcctgccgggtgtcacgcgcaggagcat 3576

                                                
Query: 192  catcgagctcgccagggatgacggctaccaggtcga 227
            ||||||||||||||||||||||||||||||||||||
Sbjct: 3577 catcgagctcgccagggatgacggctaccaggtcga 3612



 Score =  232 bits (117), Expect = 1e-57
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                        
Query: 220  caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3702 caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 3761

                                                                     
Query: 280  acgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggacaagg 336
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3762 acgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggacaagg 3818
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>emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (drg3 gene)
          Length = 469

 Score =  446 bits (225), Expect = e-122
 Identities = 284/303 (93%), Gaps = 3/303 (0%)
 Strand = Plus / Plus

                                                                       
Query: 34  agcaaggggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggag 93
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 170 agcaaggggttcgcggacgtgctgtacctggactcggtccacaagaggtacgtggaggag 229

                                                                       
Query: 94  gcctcctcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacg 153
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |
Sbjct: 230 gcctcctcctgcaacctcttcgtcgtgaagggcggcgccgtcgcgacgccggcgacggag 289

                                                                       
Query: 154 gcagggaccatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccagggatgac 213
           |   |||||||||||||||| ||||||||  |||||||||||||||||||||| ||   |
Sbjct: 290 g---ggaccatcctgccgggggtcacgcgtcggagcatcatcgagctcgccagagacagc 346

                                                                       
Query: 214 ggctaccaggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtg 273
           ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 347 ggctaccaggtcgaagagcgcctcgtctccatcgacgatctcgtcagtgccgacgaagtg 406

                                                                       
Query: 274 ttctgcacgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggaca 333
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 407 ttctgcacgggaacggccgtcggcgtcaccccggtgtccaccatcacctaccaagggaca 466

              
Query: 334 agg 336
           |||
Sbjct: 467 agg 469
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>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  272 bits (137), Expect = 1e-69
 Identities = 331/395 (83%), Gaps = 3/395 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
            |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 841  gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 900

                                                                        
Query: 100  tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
            ||||||||||||||| ||||||||| ||||| |||||| |||||||| ||   || |   
Sbjct: 901  tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccggccaccgtggga--- 957

                                                                        
Query: 160  accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccagggatgacggctac 219
            ||||||||||||||  ||||||||| |||| |||||||||||||||||||   |||||| 
Sbjct: 958  accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccagggaccgcggctat 1017

                                                                        
Query: 220  caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
            ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1018 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 1077

                                                                        
Query: 280  acgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggacaaggcac 339
            || ||||| || || | |||  |||| || ||||   | || ||||| |||  |||| ||
Sbjct: 1078 accggaacagcggtggtcgttgccccagtatcgagtgttacttaccatgggcaaaggtac 1137

                                                                        
Query: 340  gagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcgatc 399
            ||||||||||||||  | |||||||| |||  || | || |||||||||| || || |||
Sbjct: 1138 gagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtccatc 1197

                                               
Query: 400  cagatggggctggcagaggacaagaaaggatggac 434
            |||||||| ||||| ||||||||||||||||||||
Sbjct: 1198 cagatgggcctggctgaggacaagaaaggatggac 1232
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>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
            insert sequence
          Length = 1738

 Score =  272 bits (137), Expect = 1e-69
 Identities = 331/395 (83%), Gaps = 3/395 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
            |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 961  gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 1020

                                                                        
Query: 100  tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
            ||||||||||||||| ||||||||| ||||| |||||| |||||||| ||   || |   
Sbjct: 1021 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccggccaccgtggga--- 1077

                                                                        
Query: 160  accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccagggatgacggctac 219
            ||||||||||||||  ||||||||| |||| |||||||||||||||||||   |||||| 
Sbjct: 1078 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccagggaccgcggctat 1137

                                                                        
Query: 220  caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
            ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1138 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 1197

                                                                        
Query: 280  acgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggacaaggcac 339
            || ||||| || || | |||  |||| || ||||   | || ||||| |||  |||| ||
Sbjct: 1198 accggaacagcggtggtcgttgccccagtatcgagtgttacttaccatgggcaaaggtac 1257

                                                                        
Query: 340  gagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcgatc 399
            ||||||||||||||  | |||||||| |||  || | || |||||||||| || || |||
Sbjct: 1258 gagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtccatc 1317

                                               
Query: 400  cagatggggctggcagaggacaagaaaggatggac 434
            |||||||| ||||| ||||||||||||||||||||
Sbjct: 1318 cagatgggcctggctgaggacaagaaaggatggac 1352
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>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
            insert sequence
          Length = 1577

 Score =  272 bits (137), Expect = 1e-69
 Identities = 331/395 (83%), Gaps = 3/395 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
            |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 956  gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 1015

                                                                        
Query: 100  tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
            ||||||||||||||| ||||||||| ||||| |||||| |||||||| ||   || |   
Sbjct: 1016 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccggccaccgtggga--- 1072

                                                                        
Query: 160  accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccagggatgacggctac 219
            ||||||||||||||  ||||||||| |||| |||||||||||||||||||   |||||| 
Sbjct: 1073 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccagggaccgcggctat 1132

                                                                        
Query: 220  caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
            ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1133 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 1192

                                                                        
Query: 280  acgggaacggccgtcggcgtcaccccggtgtcgaccatcacctaccaagggacaaggcac 339
            || ||||| || || | |||  |||| || ||||   | || ||||| |||  |||| ||
Sbjct: 1193 accggaacagcggtggtcgttgccccagtatcgagtgttacttaccatgggcaaaggtac 1252

                                                                        
Query: 340  gagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcgatc 399
            ||||||||||||||  | |||||||| |||  || | || |||||||||| || || |||
Sbjct: 1253 gagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtccatc 1312

                                               
Query: 400  cagatggggctggcagaggacaagaaaggatggac 434
            |||||||| ||||| ||||||||||||||||||||
Sbjct: 1313 cagatgggcctggctgaggacaagaaaggatggac 1347
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  151 bits (76), Expect = 3e-33
 Identities = 147/170 (86%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                           
Query: 40      gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
               |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 6919519 gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 6919578

                                                                           
Query: 100     tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
               ||||||||||||||| ||||||||| ||||| |||||| |||||||   | || |  || 
Sbjct: 6919579 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccgg---ccaccgtggga 6919635

                                                                 
Query: 160     accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccaggga 209
               ||||||||||||||  ||||||||| |||| |||||||||||||||||||
Sbjct: 6919636 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccaggga 6919685



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                           
Query: 220     caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
               ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 6919848 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 6919907

                       
Query: 280     acgggaac 287
               || |||||
Sbjct: 6919908 accggaac 6919915



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                           
Query: 338     acgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcga 397
               ||||||||||||||||  | |||||||| |||  || | || |||||||||| || || |
Sbjct: 6920066 acgagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtcca 6920125

                                                    
Query: 398     tccagatggggctggcagaggacaagaaaggatggac 434
               |||||||||| ||||| ||||||||||||||||||||
Sbjct: 6920126 tccagatgggcctggctgaggacaagaaaggatggac 6920162
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  151 bits (76), Expect = 3e-33
 Identities = 147/170 (86%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                           
Query: 40      gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
               |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 6917414 gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 6917473

                                                                           
Query: 100     tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
               ||||||||||||||| ||||||||| ||||| |||||| |||||||   | || |  || 
Sbjct: 6917474 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccgg---ccaccgtggga 6917530

                                                                 
Query: 160     accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccaggga 209
               ||||||||||||||  ||||||||| |||| |||||||||||||||||||
Sbjct: 6917531 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccaggga 6917580



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                           
Query: 220     caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
               ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 6917743 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 6917802

                       
Query: 280     acgggaac 287
               || |||||
Sbjct: 6917803 accggaac 6917810



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                           
Query: 338     acgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcga 397
               ||||||||||||||||  | |||||||| |||  || | || |||||||||| || || |
Sbjct: 6917961 acgagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtcca 6918020

                                                    
Query: 398     tccagatggggctggcagaggacaagaaaggatggac 434
               |||||||||| ||||| ||||||||||||||||||||
Sbjct: 6918021 tccagatgggcctggctgaggacaagaaaggatggac 6918057
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score =  151 bits (76), Expect = 3e-33
 Identities = 147/170 (86%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                          
Query: 40     gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
              |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 115452 gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 115511

                                                                          
Query: 100    tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
              ||||||||||||||| ||||||||| ||||| |||||| |||||||   | || |  || 
Sbjct: 115512 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccgg---ccaccgtggga 115568

                                                                
Query: 160    accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccaggga 209
              ||||||||||||||  ||||||||| |||| |||||||||||||||||||
Sbjct: 115569 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccaggga 115618



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                          
Query: 220    caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
              ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 115781 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 115840

                      
Query: 280    acgggaac 287
              || |||||
Sbjct: 115841 accggaac 115848



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                          
Query: 338    acgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcga 397
              ||||||||||||||||  | |||||||| |||  || | || |||||||||| || || |
Sbjct: 115999 acgagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtcca 116058

                                                   
Query: 398    tccagatggggctggcagaggacaagaaaggatggac 434
              |||||||||| ||||| ||||||||||||||||||||
Sbjct: 116059 tccagatgggcctggctgaggacaagaaaggatggac 116095
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score =  151 bits (76), Expect = 3e-33
 Identities = 147/170 (86%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                         
Query: 40    gggttcgcggacgtgctgtacctggacgcggtccacaagaggtacgtcgaggaggcctcc 99
             |||||| | |||||||||||||| |||||||| ||||||| |||| | ||||||||||||
Sbjct: 86116 gggttcactgacgtgctgtacctcgacgcggtgcacaagacgtacctggaggaggcctcc 86175

                                                                         
Query: 100   tcctgcaacctcttcgtcgtcaagggcggcgccgtcgcgacgccggcgacgacggcaggg 159
             ||||||||||||||| ||||||||| ||||| |||||| |||||||   | || |  || 
Sbjct: 86176 tcctgcaacctcttcatcgtcaaggacggcgtcgtcgccacgccgg---ccaccgtggga 86232

                                                               
Query: 160   accatcctgccgggtgtcacgcgcaggagcatcatcgagctcgccaggga 209
             ||||||||||||||  ||||||||| |||| |||||||||||||||||||
Sbjct: 86233 accatcctgccggggatcacgcgcaagagcgtcatcgagctcgccaggga 86282



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 220   caggtcgaagagcgcctcgtctccatcgacgatctcgtcggcgcagacgaagtgttctgc 279
             ||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 86445 caggttgaagaacggctcgtctccatcgacgatctggtcggcgcagacgaggtgttctgc 86504

                     
Query: 280   acgggaac 287
             || |||||
Sbjct: 86505 accggaac 86512



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                         
Query: 338   acgagttcaggactggggaagacacgttgtcgaggaaattgtacacgactctcacatcga 397
             ||||||||||||||||  | |||||||| |||  || | || |||||||||| || || |
Sbjct: 86663 acgagttcaggactggacatgacacgttatcgcagacactgcacacgactctgacgtcca 86722

                                                  
Query: 398   tccagatggggctggcagaggacaagaaaggatggac 434
             |||||||||| ||||| ||||||||||||||||||||
Sbjct: 86723 tccagatgggcctggctgaggacaagaaaggatggac 86759
to top
>ref|XM_467440.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 128  gcgccgtcgcgacgccggcgacgacg 153
            |||||| |||||||||||||||||||
Sbjct: 1526 gcgccgacgcgacgccggcgacgacg 1501
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 128      gcgccgtcgcgacgccggcgacgacg 153
                |||||| |||||||||||||||||||
Sbjct: 29535169 gcgccgacgcgacgccggcgacgacg 29535194



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 124      ggcggcgccgtcgcgacgccggcg 147
                |||||||||||||||||| |||||
Sbjct: 22628228 ggcggcgccgtcgcgacgacggcg 22628205
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>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1038_A06
          Length = 147836

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 128    gcgccgtcgcgacgccggcgacgacg 153
              |||||| |||||||||||||||||||
Sbjct: 130199 gcgccgacgcgacgccggcgacgacg 130224
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>dbj|AK107391.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C12, full
            insert sequence
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 128  gcgccgtcgcgacgccggcgacgacg 153
            |||||| |||||||||||||||||||
Sbjct: 1526 gcgccgacgcgacgccggcgacgacg 1501
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>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 315    catcacctaccaagggacaag 335
              |||||||||||||||||||||
Sbjct: 145083 catcacctaccaagggacaag 145103
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>gb|AF547699.1| Lysimachia heterogenea internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 gcgcctcgtctccatcgacga 251
           |||||||||||||||||||||
Sbjct: 557 gcgcctcgtctccatcgacga 577
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>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    gattgattgattgattaggaa 461
              |||||||||||||||||||||
Sbjct: 139465 gattgattgattgattaggaa 139485
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>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    catcacctaccaagggacaag 335
              |||||||||||||||||||||
Sbjct: 218910 catcacctaccaagggacaag 218890
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 509   tattatctttgcaaatgtgaa 529
             |||||||||||||||||||||
Sbjct: 19245 tattatctttgcaaatgtgaa 19225
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>gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, complete sequence
          Length = 133053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    accatcacctaccaagggaca 333
              |||||||||||||||||||||
Sbjct: 105753 accatcacctaccaagggaca 105733
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>gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, complete sequence
          Length = 186881

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  accatcacctaccaagggaca 333
            |||||||||||||||||||||
Sbjct: 8351 accatcacctaccaagggaca 8331
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>gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, partial cds
          Length = 5688

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   tgctgtacctggacgcggtcc 73
            |||||||||||||||||||||
Sbjct: 2006 tgctgtacctggacgcggtcc 2026
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>gb|AY048850.1| Halobacterium salinarum strain J7 plasmid pHH205, complete sequence
          Length = 16341

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 133  gtcgcgacgccggcgacgacg 153
            |||||||||||||||||||||
Sbjct: 1923 gtcgcgacgccggcgacgacg 1903
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>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 509   tattatctttgcaaatgtgaa 529
             |||||||||||||||||||||
Sbjct: 80448 tattatctttgcaaatgtgaa 80468
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>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 509  tattatctttgcaaatgtgaa 529
            |||||||||||||||||||||
Sbjct: 3208 tattatctttgcaaatgtgaa 3228
to top
>gb|AE004988.1| Halobacterium sp. NRC-1 section 19 of 170 of the complete genome
          Length = 12549

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 135  cgcgacgccggcgacgacggc 155
            |||||||||||||||||||||
Sbjct: 3641 cgcgacgccggcgacgacggc 3621
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>gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, complete sequence
          Length = 156107

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     gcctcctcctgcaacctctt 113
              ||||||||||||||||||||
Sbjct: 105652 gcctcctcctgcaacctctt 105671
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>ref|XM_480381.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 gacgccggcgacgacggcag 157
           ||||||||||||||||||||
Sbjct: 120 gacgccggcgacgacggcag 139
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>ref|XM_466433.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  ggcggcgccgtcgcgacgccggcg 147
            |||||||||||||||||| |||||
Sbjct: 1526 ggcggcgccgtcgcgacgacggcg 1503
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>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   tagcgattgattgattgatt 456
             ||||||||||||||||||||
Sbjct: 28828 tagcgattgattgattgatt 28809
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    tagcgattgattgattgatt 456
              ||||||||||||||||||||
Sbjct: 645157 tagcgattgattgattgatt 645138
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     gggcggcgccgtcgcgacgc 142
               ||||||||||||||||||||
Sbjct: 1754326 gggcggcgccgtcgcgacgc 1754345
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>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 442   attgattgattgattaggaaaaga 465
             ||||||| ||||||||||||||||
Sbjct: 33718 attgattcattgattaggaaaaga 33695
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>ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 ggctggcagaggacaagaaa 426
           ||||||||||||||||||||
Sbjct: 973 ggctggcagaggacaagaaa 992
to top
>gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complete sequence
          Length = 101215

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 442   attgattgattgattaggaaaaga 465
             ||||||| ||||||||||||||||
Sbjct: 29212 attgattcattgattaggaaaaga 29235
to top
>ref|XM_750819.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g15770)
           partial mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  ctcctgcaacctcttcgtcg 118
           ||||||||||||||||||||
Sbjct: 589 ctcctgcaacctcttcgtcg 570
to top
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cgccggcgacgacggcaggg 159
              ||||||||||||||||||||
Sbjct: 114947 cgccggcgacgacggcaggg 114928
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 442     attgattgattgattaggaa 461
               ||||||||||||||||||||
Sbjct: 1678281 attgattgattgattaggaa 1678262
to top
>emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22 on chromosome Xq25-26.3,
             complete sequence
          Length = 85538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   ttgattgattaggaaaagag 466
             ||||||||||||||||||||
Sbjct: 54316 ttgattgattaggaaaagag 54297
to top
>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 518   tgcaaatgtgaataattatcatgg 541
             ||||||||||||| ||||||||||
Sbjct: 54891 tgcaaatgtgaattattatcatgg 54868
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     gggcggcgccgtcgcgacgc 142
               ||||||||||||||||||||
Sbjct: 3089219 gggcggcgccgtcgcgacgc 3089238
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>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    gattgattgattgattagga 460
              ||||||||||||||||||||
Sbjct: 212270 gattgattgattgattagga 212251
to top
>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5,
             complete sequence
          Length = 189369

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   atccagtattgttttagtat 511
             ||||||||||||||||||||
Sbjct: 68740 atccagtattgttttagtat 68759
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 130     gccgtcgcgacgccggcgacgacggcag 157
               |||||||| ||| |||||||||||||||
Sbjct: 3536390 gccgtcgcaacgtcggcgacgacggcag 3536417
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    cgtcaagggcggcgccgtcg 136
              ||||||||||||||||||||
Sbjct: 600876 cgtcaagggcggcgccgtcg 600857
to top
>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   ttgattgattgattaggaaa 462
             ||||||||||||||||||||
Sbjct: 45526 ttgattgattgattaggaaa 45507
to top
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome
          Length = 135611

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 363   gttgtcgaggaaattgtacacgac 386
             |||||||| |||||||||||||||
Sbjct: 78581 gttgtcgacgaaattgtacacgac 78558
to top
>gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) gene,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  ggctggcagaggacaagaaa 426
            ||||||||||||||||||||
Sbjct: 2409 ggctggcagaggacaagaaa 2428
to top
>gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) mRNA,
           complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 ggctggcagaggacaagaaa 426
           ||||||||||||||||||||
Sbjct: 973 ggctggcagaggacaagaaa 992
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     gacgccggcgacgacggcag 157
               ||||||||||||||||||||
Sbjct: 1948844 gacgccggcgacgacggcag 1948825



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 124     ggcggcgccgtcgcgacgccggcgacga 151
               ||||||||||||||| || |||||||||
Sbjct: 1456686 ggcggcgccgtcgcgccggcggcgacga 1456713
to top
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  agcatccagtattgttttag 508
            ||||||||||||||||||||
Sbjct: 6726 agcatccagtattgttttag 6707
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     gggcggcgccgtcgcgacgc 142
               ||||||||||||||||||||
Sbjct: 2237845 gggcggcgccgtcgcgacgc 2237864
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     gacgccggcgacgacggcag 157
               ||||||||||||||||||||
Sbjct: 4741233 gacgccggcgacgacggcag 4741252
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>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    tccagtattgttttagtatt 512
              ||||||||||||||||||||
Sbjct: 137939 tccagtattgttttagtatt 137920
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>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    cagatggggctggcagagga 419
              ||||||||||||||||||||
Sbjct: 133487 cagatggggctggcagagga 133506
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>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
             complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 441   gattgattgattgattaggaaaag 464
             ||||||||||||||||| ||||||
Sbjct: 15151 gattgattgattgattaagaaaag 15128
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>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   tccagtattgttttagtatt 512
             ||||||||||||||||||||
Sbjct: 10566 tccagtattgttttagtatt 10547
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>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056I22
          Length = 147728

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   ggcggcgccgtcgcgacgccggcg 147
             |||||||||||||||||| |||||
Sbjct: 76039 ggcggcgccgtcgcgacgacggcg 76016
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0455A11
          Length = 158629

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   gacgccggcgacgacggcag 157
             ||||||||||||||||||||
Sbjct: 99249 gacgccggcgacgacggcag 99268
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     gcgacgccggcgacgacggc 155
               ||||||||||||||||||||
Sbjct: 2983156 gcgacgccggcgacgacggc 2983137
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     cggcgccgtcgcgacgccgg 145
               ||||||||||||||||||||
Sbjct: 1274988 cggcgccgtcgcgacgccgg 1275007
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>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
             complete sequence
          Length = 179116

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 441   gattgattgattgattaggaaaag 464
             |||||||||||||||| |||||||
Sbjct: 89978 gattgattgattgatttggaaaag 89955
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>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152586

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    cagatggggctggcagagga 419
              ||||||||||||||||||||
Sbjct: 129029 cagatggggctggcagagga 129010
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>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    gattgattgattgattagga 460
              ||||||||||||||||||||
Sbjct: 138834 gattgattgattgattagga 138815
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>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 437  tagcgattgattgattgatt 456
            ||||||||||||||||||||
Sbjct: 7897 tagcgattgattgattgatt 7916
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>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    agcatccagtattgttttag 508
              ||||||||||||||||||||
Sbjct: 115407 agcatccagtattgttttag 115388
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>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence
          Length = 153019

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tcaccccggtgtcgaccatc 318
             ||||||||||||||||||||
Sbjct: 53138 tcaccccggtgtcgaccatc 53157
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>emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the apramycin biosynthesis
             cluster
          Length = 41623

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gcgccgtcgcgacgccggcg 147
             ||||||||||||||||||||
Sbjct: 16030 gcgccgtcgcgacgccggcg 16011


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,650,785
Number of Sequences: 3902068
Number of extensions: 4650785
Number of successful extensions: 168790
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167346
Number of HSP's gapped (non-prelim): 1443
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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