| Clone Name | basd13i04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 Score = 882 bits (445), Expect = 0.0 Identities = 448/449 (99%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 869 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 929 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 989 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 1049 Query: 253 ttacagccggtatgccctcgatgaagaacatcgccggtagcgcctttgcaatgtgaagtt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 ttacagccggtatgccctcgatgaagaacatcgccggtagcgcctttgcaatgtgaagtt 1109 Query: 313 tgagcagcgcctcgtcctctgatgcagctggaattagctatttgcctgtcaaattaagcg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 tgagcagcgcctcgtcctctgatgcagctggaattagctatttgcctgtcaaattaagcg 1169 Query: 373 ggaaaactagcattgatggttccaggactatgtattctgtgcactagctatggatgtgcc 432 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 ggcaaactagcattgatggttccaggactatgtattctgtgcactagctatggatgtgcc 1229 Query: 433 cgttaataacaatgaagcagttttttttt 461 ||||||||||||||||||||||||||||| Sbjct: 1230 cgttaataacaatgaagcagttttttttt 1258
>emb|X66012.1|TACATHBA T.aestivum mRNA 1 for cathepsin B (2529) Length = 1065 Score = 603 bits (304), Expect = e-169 Identities = 398/428 (92%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 682 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 683 tgtacaagcacatcaccggtggagtcatgggaggtcacgccgtcaagttgattggttggg 742 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gaactagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 802 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 gcgatgacgggtacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 862 Query: 253 ttacagccggtatgccctcgatgaagaacatcgccggtagcgcctttgcaatgtgaagtt 312 |||| |||||||||||||||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 863 ttactgccggtatgccctcgacaaagaacatcgccggtagcgccttcgcaatttaaagtt 922 Query: 313 tgagcagcgcctcgtcctctgatgcagctggaattagctatttgcctgtcaa-attaagc 371 ||||| || ||| ||||||||||| | ||||||||||||||||||| |||| |||||| Sbjct: 923 tgagctgccccttctcctctgatgctgttggaattagctatttgcctttcaagtttaagc 982 Query: 372 gggaaaactagcattgatggttccaggactatgtattctgtgcactagctatggatgtgc 431 ||| | | ||||||||||||| |||||| | ||||||||||||||||||||| ||||| Sbjct: 983 gggcagattagcattgatggtaccaggaatctgtattctgtgcactagctattaatgtgt 1042 Query: 432 ccgttaat 439 |||||||| Sbjct: 1043 ccgttaat 1050
>dbj|AK101093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N03, full insert sequence Length = 1437 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 950 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 1009 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 1010 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 1069 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1070 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1129 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1130 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1189 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1190 ttgttgctggtatgccctcgacgaagaacat 1220
>dbj|AK100225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047M19, full insert sequence Length = 1436 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 948 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 1007 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 1008 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 1067 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1068 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1127 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1128 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1187 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1188 ttgttgctggtatgccctcgacgaagaacat 1218
>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full insert sequence Length = 3464 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 1079 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 1138 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 1139 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 1198 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1199 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1258 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1259 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1318 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1319 ttgttgctggtatgccctcgacgaagaacat 1349
>dbj|AK064820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E23, full insert sequence Length = 1369 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 881 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 940 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 941 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 1000 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1001 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1060 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1061 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1120 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1121 ttgttgctggtatgccctcgacgaagaacat 1151
>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full insert sequence Length = 1565 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 880 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 939 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 940 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 999 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1000 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1059 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1060 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1119 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1120 ttgttgctggtatgccctcgacgaagaacat 1150
>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine protease mRNA, complete cds Length = 1475 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 ||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 902 atggccctgtagaagttgctttcaccgtttatgaggattttgcacactacaaatcaggag 961 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | ||||||||||||||||||||| | ||||| |||||||| |||||||||||||| |||| Sbjct: 962 tatacaagcacatcacaggtggcatgatgggtggtcatgctgtcaagttgattggatggg 1021 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 1022 gaaccacggatgctggcgaggattactggctgcttgcaaaccagtggaacagaggatggg 1081 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatg 252 | ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1082 gcgatgatgggtacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatg 1141 Query: 253 ttacagccggtatgccctcgatgaagaacat 283 || || ||||||||||||| ||||||||| Sbjct: 1142 ttgttgctggtatgccctcgacgaagaacat 1172
>gb|BT016464.1| Zea mays clone Contig297 mRNA sequence Length = 1136 Score = 315 bits (159), Expect = 7e-83 Identities = 210/227 (92%) Strand = Plus / Plus Query: 18 cctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggagtgtac 77 |||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 594 cctgtagaagttgctttcacagtttacgaggatttcgcacactacaaatctggagtgtac 653 Query: 78 aagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggggaacc 137 ||||||||||| |||||| | ||||| || |||||||||||||||||||| ||||||||| Sbjct: 654 aagcacatcaccggtggcattatgggcggccatgccgtcaagttgattggatggggaacc 713 Query: 138 agtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggggtgat 197 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 714 agtgatgctggagaggattactggcttctggcaaatcagtggaatagaggctggggcgac 773 Query: 198 gacggatacttcaagatcataaggggcaagaatgaatgtggcatcga 244 || |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 774 gatggatacttcaagatcataaggggcaaaaatgaatgtggcatcga 820
>gb|AY112465.1| Zea mays CL31697_1 mRNA sequence Length = 1472 Score = 293 bits (148), Expect = 3e-76 Identities = 206/227 (90%) Strand = Plus / Minus Query: 18 cctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggagtgtac 77 |||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 495 cctgtagaagttgctttcacagtttacgaggatttcgcacactacaaatctggagtgtac 436 Query: 78 aagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggggaacc 137 ||||||||||| |||||| | ||||| || |||||||||||||||||||| ||||||||| Sbjct: 435 aagcacatcaccggtggcattatgggtggccatgccgtcaagttgattggatggggaacc 376 Query: 138 agtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggggtgat 197 ||||||||||| || |||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 375 agtgatgctggagaagattactggcttctggcaaatcagtggaatagaggctggggcgat 316 Query: 198 gacggatacttcaagatcataaggggcaagaatgaatgtggcatcga 244 || |||||||||||||||||||||||| ||||||||||||||| Sbjct: 315 gatggatacttcaagatcataaggggcnnnnntgaatgtggcatcga 269
>emb|X66014.1|TACATHBB T.aestivum mRNA 2 for cathepsin B (2077) Length = 1216 Score = 260 bits (131), Expect = 4e-66 Identities = 143/147 (97%) Strand = Plus / Plus Query: 47 ggacttcgcacactacaagtcaggagtgtacaagcacatcacaggtggcgtcatgggagg 106 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1070 ggacttcgcacactacaaatcaggagtatacaagcacatcacaggtggcgtgatgggagg 1129 Query: 107 tcatgccgtcaagttgattggttggggaaccagtgatgctggcgaggattactggcttct 166 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 tcatgccgtcaagttgatcggttggggaaccagtgatgctggcgaggattactggcttct 1189 Query: 167 tgcaaatcagtggaacagaggctgggg 193 ||||||||||||||||||||||||||| Sbjct: 1190 tgcaaatcagtggaacagaggctgggg 1216 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgag 47 ||||||||||||||||||||||||| ||||||||| Sbjct: 798 atggccctgtagaagttgctttcaccgtttatgag 832
>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) Length = 4792 Score = 196 bits (99), Expect = 5e-47 Identities = 111/115 (96%) Strand = Plus / Plus Query: 47 ggacttcgcacactacaagtcaggagtgtacaagcacatcacaggtggcgtcatgggagg 106 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 3917 ggacttcgcacactacaaatcaggagtatacaagcacatcacaggtggcgtgatgggagg 3976 Query: 107 tcatgccgtcaagttgattggttggggaaccagtgatgctggcgaggattactgg 161 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3977 tcatgccgtcaagttgatcggttggggaaccagtgatgctggcgaggattactgg 4031 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 198 gacggatacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatgttaca 257 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 4240 gacggatacttcaagatcataaggggcgagaatgaatgtggcatcgaaggcgatgttact 4299 Query: 258 gccggtatgccctcgatgaagaaca 282 |||||||||||||||| ||||||| Sbjct: 4300 gccggtatgccctcgacaaagaaca 4324 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 161 gcttcttgcaaatcagtggaacagaggctggggtgatg 198 |||||||||||||||||||||||||||||||||||||| Sbjct: 4114 gcttcttgcaaatcagtggaacagaggctggggtgatg 4151 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgagg 48 ||||||||||||||||||||||||| |||||||||| Sbjct: 3580 atggccctgtagaagttgctttcaccgtttatgagg 3615
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 143 bits (72), Expect = 6e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 54 gcacactacaagtcaggagtgtacaagcacatcacaggtggcgtcatgggaggtcatgcc 113 ||||||||||| |||||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 111376 gcacactacaaatcaggagtatacaagcacatcacaggtggcatgatgggtggtcatgct 111435 Query: 114 gtcaagttgattggttggggaaccagtgatgctggcgaggattactgg 161 |||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 111436 gtcaagttgattggatggggaaccacggatgctggcgaggattactgg 111483 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 204 tacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatgttacagccggt 263 |||||||||||||||||||||| || |||||||||||||||||||||||| || ||| Sbjct: 111713 tacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatgttgttgctggt 111772 Query: 264 atgccctcgatgaagaacat 283 |||||||||| ||||||||| Sbjct: 111773 atgccctcgacgaagaacat 111792 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgagg 48 ||||||||||||||||||||||||| |||||||||| Sbjct: 110865 atggccctgtagaagttgctttcaccgtttatgagg 110900 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 165 cttgcaaatcagtggaacagaggctggggtgatg 198 |||||||| |||||||||||||| ||||| |||| Sbjct: 111578 cttgcaaaccagtggaacagaggatggggcgatg 111611
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 6e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 54 gcacactacaagtcaggagtgtacaagcacatcacaggtggcgtcatgggaggtcatgcc 113 ||||||||||| |||||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 14031299 gcacactacaaatcaggagtatacaagcacatcacaggtggcatgatgggtggtcatgct 14031358 Query: 114 gtcaagttgattggttggggaaccagtgatgctggcgaggattactgg 161 |||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 14031359 gtcaagttgattggatggggaaccacggatgctggcgaggattactgg 14031406 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 204 tacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatgttacagccggt 263 |||||||||||||||||||||| || |||||||||||||||||||||||| || ||| Sbjct: 14031636 tacttcaagatcataaggggcacaaacgaatgtggcatcgaagaagatgttgttgctggt 14031695 Query: 264 atgccctcgatgaagaacat 283 |||||||||| ||||||||| Sbjct: 14031696 atgccctcgacgaagaacat 14031715 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgagg 48 ||||||||||||||||||||||||| |||||||||| Sbjct: 14030788 atggccctgtagaagttgctttcaccgtttatgagg 14030823 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 165 cttgcaaatcagtggaacagaggctggggtgatg 198 |||||||| |||||||||||||| ||||| |||| Sbjct: 14031501 cttgcaaaccagtggaacagaggatggggcgatg 14031534
>gb|AY662990.1| Petunia x hybrida cysteine proteinase (CP4) mRNA, partial cds Length = 630 Score = 123 bits (62), Expect = 6e-25 Identities = 179/218 (82%) Strand = Plus / Plus Query: 30 gctttcacagtttatgaggacttcgcacactacaagtcaggagtgtacaagcacatcaca 89 ||||| || ||||||||||| ||||| ||||||||||| ||||| |||||||| | || Sbjct: 67 gcttttactgtttatgaggatttcgctcactacaagtctggagtttacaagcatgtaact 126 Query: 90 ggtggcgtcatgggaggtcatgccgtcaagttgattggttggggaaccagtgatgctggc 149 |||| | ||||||| ||||| || ||| | ||||| ||||||||| ||| | ||| Sbjct: 127 ggtgatgaattgggaggccatgctgttaagctcattggatggggaacctctgaggatgga 186 Query: 150 gaggattactggcttcttgcaaatcagtggaacagaggctggggtgatgacggatacttc 209 ||||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 187 gaggactattggcttcttgccaatcagtggaacagaggctggggtgatgatgggtacttt 246 Query: 210 aagatcataaggggcaagaatgaatgtggcatcgaaga 247 ||||||| ||| || | ||| ||||||| ||| ||||| Sbjct: 247 aagatcagaagaggaacgaacgaatgtgacatagaaga 284
>emb|AJ251536.1|PSA251536 Pisum sativum partial mRNA for putative cathepsin B-like protease (cat1 gene) clone PsCat1 Length = 705 Score = 107 bits (54), Expect = 3e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 24 gaagttgctttcacagtttatgaggacttcgcacactacaagtcaggagtgtacaagcac 83 |||||||| |||| ||||||||||| || || |||||||| |||||||| ||||| ||| Sbjct: 262 gaagttgcattcagtgtttatgaggattttgctcactacaaatcaggagtttacaaacac 321 Query: 84 atcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggggaaccagtgat 143 ||||||||| | | || ||||| || || ||| ||| ||| |||||||| |||||| Sbjct: 322 atcacaggttctgcactaggcggtcacgcagtaaagctgaatgggtggggaacaagtgat 381 Query: 144 gctggcgaggattactggcttcttgcaaatcagtggaacagaggctggggtgatgacgga 203 | || ||||| || ||||||||||||||||||||||| | | ||||| ||||| || Sbjct: 382 gaaggggaggactattggcttcttgcaaatcagtggaatacaaattggggagatgatggt 441 Query: 204 tacttcaagatcataaggggcaagaatgaatgtggcatcgaagaagatgttacagccg 261 ||||||||||||| || || | ||||||||||| || ||||| ||||||||||||| Sbjct: 442 tacttcaagatcaagagagggacaaatgaatgtgggattgaagaggatgttacagccg 499
>ref|NM_100110.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G02300 mRNA, complete cds Length = 1227 Score = 97.6 bits (49), Expect = 3e-17 Identities = 184/229 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || |||||||| || ||||| |||||||| ||||| ||||| ||||||| Sbjct: 821 atggacctgtcgaggttgcttttaccgtttacgaggactttgcacattacaaatcaggag 880 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | |||||| |||| || ||| || ||||||||||| || ||| | ||||| |||| Sbjct: 881 tatacaagtacataacgggtactaagattggaggtcatgcagttaagctcattggctggg 940 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| ||||| ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 941 gaacttctgatgacggcgaagattattggttgcttgcaaatcaatggaaccgaagctggg 1000 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcat 241 ||||||| || ||||||||||||| || || | ||| ||||||||||| Sbjct: 1001 gtgatgatggttacttcaagatcaggagaggaacgaacgaatgtggcat 1049
>dbj|AK221536.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine proteinase like protein, complete cds, clone: RAFL07-69-N22 Length = 1520 Score = 97.6 bits (49), Expect = 3e-17 Identities = 184/229 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || |||||||| || ||||| |||||||| ||||| ||||| ||||||| Sbjct: 1057 atggacctgtcgaggttgcttttaccgtttacgaggactttgcacattacaaatcaggag 1116 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | |||||| |||| || ||| || ||||||||||| || ||| | ||||| |||| Sbjct: 1117 tatacaagtacataacgggtactaagattggaggtcatgcagttaagctcattggctggg 1176 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| ||||| ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 1177 gaacttctgatgacggcgaagattattggttgcttgcaaatcaatggaaccgaagctggg 1236 Query: 193 gtgatgacggatacttcaagatcataaggggcaagaatgaatgtggcat 241 ||||||| || ||||||||||||| || || | ||| ||||||||||| Sbjct: 1237 gtgatgatggttacttcaagatcaggagaggaacgaacgaatgtggcat 1285
>ref|NM_100111.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G02305 mRNA, complete cds Length = 1277 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||| Sbjct: 808 atggacctgttgaggttgccttcactgtttacgaggactttgcgcattacaaatctggag 867 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 ||||||||||||| |||||| ||| ||||||||||| || || | ||||| |||| Sbjct: 868 tgtacaagcacataacaggtactaacattggaggtcatgctgttaaacttattggctggg 927 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| || || ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 928 gaacttctgatgacggtgaagattattggttgcttgcaaatcaatggaaccgaagctggg 987 Query: 193 gtgatgacggatacttcaagatca 216 ||||||| || ||||||||||||| Sbjct: 988 gtgatgatgggtacttcaagatca 1011
>gb|AF428337.1|AF428337 Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1277 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||| Sbjct: 876 atggacctgttgaggttgccttcactgtttacgaggactttgcgcattacaaatctggag 935 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 ||||||||||||| |||||| ||| ||||||||||| || || | ||||| |||| Sbjct: 936 tgtacaagcacataacaggtactaacattggaggtcatgctgttaaacttattggctggg 995 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| || || ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 996 gaacttctgatgacggtgaagattattggttgcttgcaaatcaatggaaccgaagctggg 1055 Query: 193 gtgatgacggatacttcaagatca 216 ||||||| || ||||||||||||| Sbjct: 1056 gtgatgatgggtacttcaagatca 1079
>gb|AY039887.1| Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1277 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||| Sbjct: 808 atggacctgttgaggttgccttcactgtttacgaggactttgcgcattacaaatctggag 867 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 ||||||||||||| |||||| ||| ||||||||||| || || | ||||| |||| Sbjct: 868 tgtacaagcacataacaggtactaacattggaggtcatgctgttaaacttattggctggg 927 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| || || ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 928 gaacttctgatgacggtgaagattattggttgcttgcaaatcaatggaaccgaagctggg 987 Query: 193 gtgatgacggatacttcaagatca 216 ||||||| || ||||||||||||| Sbjct: 988 gtgatgatgggtacttcaagatca 1011
>gb|BT002227.1| Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1089 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||| Sbjct: 770 atggacctgttgaggttgccttcactgtttacgaggactttgcgcattacaaatctggag 829 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 ||||||||||||| |||||| ||| ||||||||||| || || | ||||| |||| Sbjct: 830 tgtacaagcacataacaggtactaacattggaggtcatgctgttaaacttattggctggg 889 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 |||| ||||| || || ||||| ||| | ||||||||||| |||||| || |||||| Sbjct: 890 gaacttctgatgacggtgaagattattggttgcttgcaaatcaatggaaccgaagctggg 949 Query: 193 gtgatgacggatacttcaagatca 216 ||||||| || ||||||||||||| Sbjct: 950 gtgatgatgggtacttcaagatca 973
>emb|X81995.1|NRCATHB N.rustica mRNA for cathepsin B-like cysteine proteinase Length = 1331 Score = 91.7 bits (46), Expect = 2e-15 Identities = 145/178 (81%) Strand = Plus / Plus Query: 39 gtttatgaggacttcgcacactacaagtcaggagtgtacaagcacatcacaggtggcgtc 98 ||||| ||||| ||||| ||||||||||| ||||| |||||||| | || |||| | Sbjct: 793 gtttacgaggatttcgctcactacaagtctggagtttacaagcatgtaactggtgatata 852 Query: 99 atgggaggtcatgccgtcaagttgattggttggggaaccagtgatgctggcgaggattac 158 |||||||| ||||| || || | || || ||||||||| || | ||| ||||| || Sbjct: 853 atgggaggccatgctgttaaactcatcggatggggaacctccgaggatggagaggactat 912 Query: 159 tggcttcttgcaaatcagtggaacagaggctggggtgatgacggatacttcaagatca 216 ||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 913 tggcttcttgccaatcagtggaacagaggctggggtgatgatggttactttaagatca 970
>gb|DQ492287.1| Nicotiana benthamiana cathepsin B (CathB) mRNA, complete cds Length = 1353 Score = 83.8 bits (42), Expect = 5e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 39 gtttatgaggacttcgcacactacaagtcaggagtgtacaagcacatcacaggtggcgtc 98 ||||| ||||| ||||| |||||||| || ||||| |||||||| | || |||| || Sbjct: 781 gtttacgaggatttcgctcactacaaatctggagtttacaagcatgtaactggtgatgta 840 Query: 99 atgggaggtcatgccgtcaagttgattggttggggaaccagtgatgctggcgaggattac 158 |||||||| ||||| || || | || || ||||||||| ||| | ||| ||||| || Sbjct: 841 atgggaggccatgctgttaaactcatcggatggggaacctctgaggatggagaggactat 900 Query: 159 tggcttcttgcaaatcagtggaacagaggctggggtgatgacggatacttcaagatca 216 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 901 tggcttcttgccaatcaatggaatagaggttggggtgatgacggttactttaagatca 958
>emb|BX815386.1|CNS0AAL6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1305 Score = 73.8 bits (37), Expect = 5e-10 Identities = 164/205 (80%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||| Sbjct: 830 atggacctgttgaggttgccttcactgtttacgaggactttgcgcattacaaatctggag 889 Query: 73 tgtacaa-gcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttgg 131 ||||||| |||||| |||||| ||| ||||||||||| || || | | ||| ||| Sbjct: 890 tgtacaatgcacataacaggtactaacattggaggtcatgctgttaaacttactggctgg 949 Query: 132 ggaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctgg 191 ||||| ||||| || || ||||| ||| | ||||||||||| |||||| || ||||| Sbjct: 950 ggaacttctgatgacggtgaagattattggttgcttgcaaatcaatggaaccgaagctgg 1009 Query: 192 ggtgatgacggatacttcaagatca 216 |||||||| || ||||||||||||| Sbjct: 1010 ggtgatgatgggtacttcaagatca 1034
>gb|AY086034.1| Arabidopsis thaliana clone 20761 mRNA, complete sequence Length = 1429 Score = 61.9 bits (31), Expect = 2e-06 Identities = 148/187 (79%) Strand = Plus / Plus Query: 13 atggccctgtagaagttgctttcacagtttatgaggacttcgcacactacaagtcaggag 72 |||| ||||| ||||| |||| || ||||||||||| || || || ||||| || |||| Sbjct: 923 atggacctgttgaagtctcttttaccgtttatgaggattttgctcattacaaatctggag 982 Query: 73 tgtacaagcacatcacaggtggcgtcatgggaggtcatgccgtcaagttgattggttggg 132 | || |||||||| |||||| ||| ||||||||||| || || | |||||||||| Sbjct: 983 tctataagcacataacaggttctaacattggaggtcatgctgttaaacttattggttggg 1042 Query: 133 gaaccagtgatgctggcgaggattactggcttcttgcaaatcagtggaacagaggctggg 192 ||||||| || || || ||||| ||| | | |||||||| |||||||||||||||| Sbjct: 1043 gaaccagcagtgaaggagaagattattggttgatggcaaatcaatggaacagaggctggg 1102 Query: 193 gtgatga 199 ||||||| Sbjct: 1103 gtgatga 1109
>ref|NM_116392.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT4G01610 transcript variant AT4G01610.1 mRNA, complete cds Length = 1431 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1078 gcaaatcaatggaacagaggctggggtgatga 1109
>ref|NM_178950.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT4G01610 transcript variant AT4G01610.2 mRNA, complete cds Length = 1431 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1078 gcaaatcaatggaacagaggctggggtgatga 1109
>gb|AY450641.1| Solanum tuberosum cathepsin B-like cysteine proteinase mRNA, complete cds Length = 1262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 177 tggaacagaggctggggtgatgacggatacttcaagatca 216 ||||| |||||||||||||| || |||||||||||||||| Sbjct: 916 tggaatagaggctggggtgaagatggatacttcaagatca 955
>gb|AF083797.1| Arabidopsis thaliana clone sps897 unknown mRNA Length = 1318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 958 gcaaatcaatggaacagaggctggggtgatga 989
>gb|AY114015.1| Arabidopsis thaliana putative cathepsin B cysteine protease (At4g01610) mRNA, complete cds Length = 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 916 gcaaatcaatggaacagaggctggggtgatga 947
>gb|AF370193.1| Arabidopsis thaliana putative cathepsin B cysteine protease (At4g01610) mRNA, complete cds Length = 1391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1028 gcaaatcaatggaacagaggctggggtgatga 1059
>gb|AY065167.1| Arabidopsis thaliana unknown protein (T15B16.17a:T15B16.17b) mRNA, complete cds Length = 1337 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1015 gcaaatcaatggaacagaggctggggtgatga 1046
>dbj|AK221398.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL25-46-G18 Length = 1336 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 982 gcaaatcaatggaacagaggctggggtgatga 1013
>dbj|AK176487.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-30-A18 Length = 1399 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1059 gcaaatcaatggaacagaggctggggtgatga 1090
>dbj|AK176433.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-18-F01 Length = 1332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 975 gcaaatcaatggaacagaggctggggtgatga 1006
>dbj|AK176416.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-14-K07 Length = 1432 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 1071 gcaaatcaatggaacagaggctggggtgatga 1102
>dbj|AK176330.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-32-C20 Length = 1340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 982 gcaaatcaatggaacagaggctggggtgatga 1013
>dbj|AK176281.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-21-C10 Length = 1290 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 975 gcaaatcaatggaacagaggctggggtgatga 1006
>dbj|AK176244.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-13-K22 Length = 1340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 982 gcaaatcaatggaacagaggctggggtgatga 1013
>dbj|AK176165.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-01-L04 Length = 1340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 982 gcaaatcaatggaacagaggctggggtgatga 1013
>dbj|AK175539.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-96-A03 Length = 1342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 985 gcaaatcaatggaacagaggctggggtgatga 1016
>dbj|AK175481.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-91-G20 Length = 1343 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 982 gcaaatcaatggaacagaggctggggtgatga 1013
>dbj|AK175280.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-71-M19 Length = 1342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 984 gcaaatcaatggaacagaggctggggtgatga 1015
>gb|BT001190.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatga 199 |||||||| ||||||||||||||||||||||| Sbjct: 916 gcaaatcaatggaacagaggctggggtgatga 947
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 168 gcaaatcagtggaacagaggctggggtgatg 198 |||||||| |||||||||||||||||||||| Sbjct: 119250 gcaaatcaatggaacagaggctggggtgatg 119280
>gb|AF101239.1|AF101239 Ipomoea batatas cathepsin B-like cysteine proteinase (CathB) mRNA, complete cds Length = 1248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 171 aatcagtggaacagaggctggggtgatgacggatacttcaagatcat 217 ||||||||||||||| ||||||| | ||| || |||||||||||||| Sbjct: 926 aatcagtggaacagaagctggggcggtgatgggtacttcaagatcat 972
>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 Length = 90596 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 168 gcaaatcagtggaacagaggctggggtgatg 198 |||||||| |||||||||||||||||||||| Sbjct: 74723 gcaaatcaatggaacagaggctggggtgatg 74693
>gb|BT014624.1| Lycopersicon esculentum clone 134127R, mRNA sequence Length = 1263 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 177 tggaacagaggctggggtgatgacggatacttcaagat 214 ||||| |||||||||||||| || |||||||||||||| Sbjct: 955 tggaatagaggctggggtgaagatggatacttcaagat 992
>emb|AJ538369.1|NTA538369 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-004 Length = 372 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 36 acagtttatgaggacttcgcacactacaagtcaggagtgtacaagcacatcacaggt 92 ||||| || ||||| || || ||||||||||||||||| ||||||||| | |||||| Sbjct: 294 acagtgtacgaggattttgctcactacaagtcaggagtttacaagcacgtaacaggt 350
>gb|AC149038.2| Medicago truncatula chromosome 7 BAC clone mth2-29a5, complete sequence Length = 136566 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 105 ggtcatgccgtcaagttgattggttggggaaccagtgatg 144 |||||||| || ||||||||||| |||||||| ||||||| Sbjct: 20754 ggtcatgcagtaaagttgattgggtggggaacaagtgatg 20715 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcttcttgcaaatcagtggaa 181 ||||||||||||||||||||| Sbjct: 20587 gcttcttgcaaatcagtggaa 20567 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 60 tacaagtcaggagtgtacaagcacatcacaggt 92 ||||| |||||||| ||||| |||||||||||| Sbjct: 13914 tacaaatcaggagtttacaaacacatcacaggt 13882 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcttcttgcaaatcagtggaa 181 ||||||||||||||||||||| Sbjct: 13701 gcttcttgcaaatcagtggaa 13681
>gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BAC T6A9 genomic sequence, complete sequence Length = 109180 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 46 aggacttcgcacactacaagtcaggagtgtacaagcacatcacaggt 92 ||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 52528 aggactttgcgcattacaaatctggagtgtacaagcacataacaggt 52574 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 165 cttgcaaatcagtggaacagaggctggggtgatg 198 ||||||||||| |||||| || |||||||||||| Sbjct: 52735 cttgcaaatcaatggaaccgaagctggggtgatg 52768 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 165 cttgcaaatcagtggaacagaggctggggtgatg 198 ||||||||||| |||||| || |||||||||||| Sbjct: 50131 cttgcaaatcaatggaaccgaagctggggtgatg 50164
>gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence Length = 106973 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 165 cttgcaaatcagtggaacagaggctggggtgatg 198 ||||||||||| |||||| || |||||||||||| Sbjct: 105503 cttgcaaatcaatggaaccgaagctggggtgatg 105536
>gb|AF024499.4| Caenorhabditis elegans cosmid F42G2, complete sequence Length = 37409 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcaaattaagcgggaaaacta 381 ||||||||||||||||||||| Sbjct: 33408 tcaaattaagcgggaaaacta 33388
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 tgaagcagtttttttttgttg 465 ||||||||||||||||||||| Sbjct: 16511 tgaagcagtttttttttgttg 16491
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccctcgatgaagaacatcgccggtagcg 294 ||||||||||||||||| ||||| ||||| Sbjct: 2454029 gccctcgatgaagaacaacgccgatagcg 2454057
>ref|XM_457137.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B03960g) partial mRNA Length = 3057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tgatgacggatacttcaaga 213 |||||||||||||||||||| Sbjct: 846 tgatgacggatacttcaaga 865
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aggtcatgccgtcaagttga 123 |||||||||||||||||||| Sbjct: 2570229 aggtcatgccgtcaagttga 2570248
>ref|XM_780892.1| PREDICTED: Strongylocentrotus purpuratus similar to cadherin-like 23 (LOC580862), mRNA Length = 2622 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 acggatacttcaagatcata 218 |||||||||||||||||||| Sbjct: 2341 acggatacttcaagatcata 2322
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tgatgacggatacttcaaga 213 |||||||||||||||||||| Sbjct: 327096 tgatgacggatacttcaaga 327115
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ttgagcagcgcctcgtcctc 331 |||||||||||||||||||| Sbjct: 3657297 ttgagcagcgcctcgtcctc 3657278
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aagttgctttcacagtttat 44 |||||||||||||||||||| Sbjct: 371720 aagttgctttcacagtttat 371739
>gb|AF283476.1|AF283476 Ipomoea batatas cathepsin B-like cysteine proteinase gene, complete cds Length = 3334 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 171 aatcagtggaacagaggctggggtgatg 198 ||||||||||||||| ||||||| |||| Sbjct: 2805 aatcagtggaacagaagctggggcgatg 2832
>emb|AL113933.1|CNS01B91 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gacttcgcacactacaagtc 67 |||||||||||||||||||| Sbjct: 69 gacttcgcacactacaagtc 88
>emb|AL111992.1|CNS019R4 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gacttcgcacactacaagtc 67 |||||||||||||||||||| Sbjct: 179 gacttcgcacactacaagtc 198
>gb|AC141366.2| Homo sapiens fosmid clone XXFOS-87310E7 from 2, complete sequence Length = 22886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tgctttcacagtttatgagg 48 |||||||||||||||||||| Sbjct: 7362 tgctttcacagtttatgagg 7343
>emb|Z24605.1|HS356TE5 H. sapiens (D2S395) DNA segment containing (CA) repeat; clone AFM356te5; single read Length = 327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tgctttcacagtttatgagg 48 |||||||||||||||||||| Sbjct: 23 tgctttcacagtttatgagg 42
>emb|CT025748.16| Zebrafish DNA sequence from clone CH73-166N24 in linkage group 5, complete sequence Length = 117231 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 caatgaagcagttttttttt 461 |||||||||||||||||||| Sbjct: 15688 caatgaagcagttttttttt 15669
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gtcatgggaggtcatgccgt 115 |||||||||||||||||||| Sbjct: 38447 gtcatgggaggtcatgccgt 38428
>emb|AL929116.4| Zebrafish DNA sequence from clone CH211-193C7, complete sequence Length = 126123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 caatgaagcagttttttttt 461 |||||||||||||||||||| Sbjct: 117948 caatgaagcagttttttttt 117929
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tgaagcagtttttttttgtt 464 |||||||||||||||||||| Sbjct: 33128 tgaagcagtttttttttgtt 33147 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,890,354 Number of Sequences: 3902068 Number of extensions: 4890354 Number of successful extensions: 106124 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105896 Number of HSP's gapped (non-prelim): 224 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)