ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13i02 |
|---|---|
| Clone Library Name | barley_pub |
>SAS10_MOUSE (Q9JI13) Something about silencing protein 10 (Disrupter of| silencing SAS10) (Charged amino acid-rich leucine zipper 1) (Crl-1) Length = 469 Score = 37.4 bits (85), Expect = 0.035 Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Frame = +1 Query: 175 AASRAHGSGEVLADHETEEPILPPPSQVDAG----NVDECKDIGVDVVPA----EPRSTK 330 AA RA + A E E+ + PPS D+ VDE + V A E S + Sbjct: 14 AAVRAQAG--LTATDENEDDLGLPPSPGDSSYYQDQVDEFHEARSRAVLAKGWNEVESGE 71 Query: 331 EGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVES 471 E DEE V L + DGD +D + ++ DDDG +EA S Sbjct: 72 EDGDEEEEVLPLDIDDGDDEDGESSEEEEVGEDDDGGSSVQSEAEAS 118
>SAS10_RAT (Q6AXX4) Something about silencing protein 10 (Disrupter of| silencing SAS10) (Charged amino acid-rich leucine zipper 1) Length = 470 Score = 33.5 bits (75), Expect = 0.51 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +1 Query: 211 ADHETEEPILPPPSQVDAG----NVDECKDIGVDVVPA----EPRSTKEGKDEEPTVTEL 366 A E E+ + PPS D+ VDE + V A E S +E DEE V L Sbjct: 24 ATDENEDDLGSPPSPGDSSYYQDQVDEFHEARSRAVLAKGWNEVESGEEDDDEEEEVLPL 83 Query: 367 LVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVES 471 + D + +D + ++ DDDG +EA S Sbjct: 84 NIDDENDEDGESSEEEEDGEDDDGGSSVQSEAEAS 118
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.7 bits (73), Expect = 0.87 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = -2 Query: 229 PRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPP-----SPTRPGRKERLLPPWQTNRRT 65 P R R+ P R P RRRS R+ +PP SP+ P ++ PP RR Sbjct: 559 PPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRA 618 Query: 64 QP 59 P Sbjct: 619 SP 620
>FUS_HRSVL (P12568) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 574 Score = 32.7 bits (73), Expect = 0.87 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = -3 Query: 267 TSVHL*RGRQDRFLGFVIGKNLAAAVGTGCSPALGVEAPV 148 T+V L + R+ RFLGF++G A A GT S L +E V Sbjct: 125 TNVTLSKKRKRRFLGFLLGVGSAIASGTAVSKVLHLEGEV 164
>ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase| type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1168 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = -2 Query: 217 DRQEPRRCRGHGMQP---CSRRRSSCVRQAAPPSPTRPGRKERLLPPWQ 80 +R +R R G + C+ R SC+R A PPSPT G PWQ Sbjct: 21 ERNGQKRSRRRGTRAGGFCTPRYMSCLRDAEPPSPTPAGPPR---CPWQ 66
>TERF1_CRIGR (O55036) Telomeric repeat-binding factor 1 (TTAGGG repeat-binding| factor 1) (Fragment) Length = 438 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 12/62 (19%) Frame = +1 Query: 316 PRSTKEGKDEEPTVTELLVSDGDGQDKFQ------------ACDDAKEVDDDGKQMAAAE 459 PR +G+D +PT ++ + + QD+F+ A D+ +E ++D +A AE Sbjct: 12 PRGCADGRDADPTEEQMAQTQRNDQDQFECQELLECQVQVGAPDEEEEEEEDSGLVAEAE 71 Query: 460 AV 465 AV Sbjct: 72 AV 73
>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) Length = 1706 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 4/89 (4%) Frame = +1 Query: 220 ETEEPILPPPSQV----DAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDG 387 E E P+ P Q + GN D + + + EP+ +GK E VT+ V+D + Sbjct: 211 EDERPLASAPEQPAPLPEVGNQDAVPQVAIPLPACEPQPEVDGKQE---VTDCEVNDVEE 267 Query: 388 QDKFQACDDAKEVDDDGKQMAAAEAVESA 474 ++ ++ +E++++ ++ + VE A Sbjct: 268 EE----LEEEEELEEEEEEELGEDGVEEA 292
>CHS9_DAUCA (Q9SB26) Chalcone synthase 9 (EC 2.3.1.74) (Naringenin-chalcone| synthase 9) Length = 389 Score = 31.6 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ +A VL + + +V RG D L ++G+ L A AV G P +G+E P+ Sbjct: 177 LAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPL 236 Query: 147 F 145 F Sbjct: 237 F 237
>CHS1_DAUCA (Q9ZS41) Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone| synthase 1) (DcCHS1) Length = 389 Score = 31.6 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ +A VL + + +V RG D L ++G+ L A AV G P +G+E P+ Sbjct: 177 LAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPL 236 Query: 147 F 145 F Sbjct: 237 F 237
>ADCY6_RAT (Q03343) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase| type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable adenylyl cyclase) (ACVI) Length = 1166 Score = 31.2 bits (69), Expect = 2.5 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -2 Query: 265 QRPLVTGEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPP 86 +R GE R R + R RG C+ R SC++ PPSPT P + R P Sbjct: 14 ERKTAWGERNGQKRPR---QATRARGF----CAPRYMSCLKNVEPPSPT-PAARTRC--P 63 Query: 85 WQTN---RRTQPQR 53 WQ RR P R Sbjct: 64 WQDEAFIRRAGPGR 77
>PYC_MOUSE (Q05920) Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1)| (Pyruvic carboxylase) (PCB) Length = 1178 Score = 31.2 bits (69), Expect = 2.5 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +1 Query: 7 HEAAAASNRFRFDPLAFAVASVDLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASR 186 HEA SN F F P+ F A GGG ++ V +E L + + Y+E+ A Sbjct: 178 HEAHEFSNTFGF-PIIFKAAY-------GGGGRGMRVVHSYEELEENYTRAYSEALA--- 226 Query: 187 AHGSGEVLADHETEEP 234 A G+G + + E+P Sbjct: 227 AFGNGALFVEKFIEKP 242
>ADCY6_CANFA (P30804) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase| type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1165 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 214 RQEPRR-CRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQ 80 ++ PRR R G C+ R SC+R A PPSPT P R PWQ Sbjct: 25 QKRPRRGTRTSGF--CTPRYMSCLRDAQPPSPT-PAAPPRC--PWQ 65
>CHSY_ANTMA (P06515) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone| synthase) Length = 390 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG D L ++G+ L AAAV G P +GVE P+ Sbjct: 177 LAENNAGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGSDPVVGVERPL 236 Query: 147 F 145 F Sbjct: 237 F 237
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 30.8 bits (68), Expect = 3.3 Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 3/134 (2%) Frame = +1 Query: 67 SVDLSAMEGGGAP---SVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPI 237 SV + +E GA + V + P H+S + H VL T+ Sbjct: 4765 SVTQTHLEDAGAAIAAAEAAVQQLRIQPTAHKSGQSNHARKQHRHSIAGVLPIQRTQSDN 4824 Query: 238 LPPPSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDA 417 LPPP+ GN D+ + V+ P + K E VS G F Sbjct: 4825 LPPPAN---GNQDQSQLALRKVMSDGPVKPEGAKPPNHRPAESSVSTGSSGSSF---GSG 4878 Query: 418 KEVDDDGKQMAAAE 459 VD +G A E Sbjct: 4879 YSVDSEGSSSTAGE 4892
>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1181 Score = 30.8 bits (68), Expect = 3.3 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Frame = +1 Query: 73 DLSAMEGGGAPSVQDVWDWEVLPD--------EHRSFYAESRAASRAHGSGEVLADHETE 228 +L A+ AP+ +D D E P EHR G+ + ETE Sbjct: 685 ELPAVTVTPAPAPEDKGDQEEDPGCQEDVDEAEHRGDMTGEEGERETEAEGKKDEEGETE 744 Query: 229 EPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQAC 408 + + G +E + G + E S EGKDE+ TE + D + + +A Sbjct: 745 A------ERKEDGQEEETETKGKEKQEGETES--EGKDEQEGETEAEGKEADHEGETEA- 795 Query: 409 DDAKEVDDDGKQMA 450 + KEV+ +G+ A Sbjct: 796 -EGKEVEHEGETEA 808
>SPTA3_MOUSE (Q9D9T6) Spermatogenesis-associated protein 3 (Testis spermatocyte| apoptosis-related protein 1) (Testis and spermatogenesis cell-related protein 1) (mTSARG1) Length = 193 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -2 Query: 226 RFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQPQR 53 R R+ P+ QP S SC A+PPS +P ++ P Q N +PQ+ Sbjct: 13 RRRNSISPQTSSDSSQQPSSETPPSCPEPASPPSKPQPCQES--TTPHQVNPEPKPQQ 68
>ADCY6_MOUSE (Q01341) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase| type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1165 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -2 Query: 172 CSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTN---RRTQPQR 53 C+ R SC++ A PPSPT P R PWQ RR P R Sbjct: 38 CAPRYMSCLKNAEPPSPT-PAAHTRC--PWQDEAFIRRAGPGR 77
>FUS_HRSVA (P03420) Fusion glycoprotein F0 precursor (Protein F) [Contains:| Fusion glycoprotein F2; Fusion glycoprotein F1] Length = 574 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -3 Query: 267 TSVHL*RGRQDRFLGFVIGKNLAAAVGTGCSPALGVEAPV 148 T+V L + R+ RFLGF++G A A G S L +E V Sbjct: 125 TNVTLSKKRKRRFLGFLLGVGSAIASGVAVSKVLHLEGEV 164
>NEUM_MOUSE (P06837) Neuromodulin (Axonal membrane protein GAP-43)| (Growth-associated protein 43) (Calmodulin-binding protein P-57) Length = 227 Score = 30.8 bits (68), Expect = 3.3 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 4/128 (3%) Frame = +1 Query: 88 EGGGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPPPSQVDAG 267 + G APS + + + P E ++ AE+ +A++A + E + P P Q D Sbjct: 104 KAGDAPSEEKKGEGDAAPSEEKAGSAETESAAKATTDNSPSSKAE-DGPAKEEPKQADVP 162 Query: 268 NVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVD----DD 435 D AE +TK + PT T +++ A D+AK + D+ Sbjct: 163 AA--VTDAAATTPAAEDAATKAA--QPPTET---AESSQAEEEKDAVDEAKPKESARQDE 215 Query: 436 GKQMAAAE 459 GK+ A+ Sbjct: 216 GKEDPEAD 223
>SYV_MYCLE (Q9CBY7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 886 Score = 30.8 bits (68), Expect = 3.3 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 4/97 (4%) Frame = -3 Query: 336 TLFS*SGLGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNLAAAVGTGCSPALGVE 157 T+ +G+ H D LV T H DR L V +++ GTG Sbjct: 231 TMLGDTGIAVHPDDKRYQHLVGTTLPH---PFIDRELVIVADEHVDPEFGTGAVKVTPAH 287 Query: 156 AP----VFVRQHLPVPHVLDGRSASSLHGRQIDGRNR 58 P + +R +LP+P+V+D ++ G + DG +R Sbjct: 288 DPNDFEIGLRHNLPMPNVMDVKAVIVDTGTEFDGMDR 324
>ADDB_RAT (Q05764) Beta-adducin (Erythrocyte adducin beta subunit) (Adducin| 63) Length = 724 Score = 30.4 bits (67), Expect = 4.3 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = +1 Query: 223 TEEPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTK-EGKDEEPTVTELLVSDGDGQDKF 399 T+ P + P + E + + P +P GK+EEP V E+L S G GQ Sbjct: 611 TKSPAVSPSKASEDAKKTEVSEANTEPEPEKPEGVVVNGKEEEPCVEEVL-SKGPGQMTT 669 Query: 400 QACDDAKEVDD 432 A D D Sbjct: 670 NADTDGDSYKD 680
>YSNF_BACSU (P94560) Stress response protein ysnF| Length = 286 Score = 30.4 bits (67), Expect = 4.3 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 17/98 (17%) Frame = +1 Query: 136 LPDEHRSFYAESRAASRAHGSGEVLADHE-------------TEEPILPPPSQVDAGNVD 276 +P H Y E R + D E T++P++ V V+ Sbjct: 181 IPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE 240 Query: 277 ECKDIGVDVVPAEPRSTKEGK----DEEPTVTELLVSD 378 E + I V EPR KEGK D++P ++ + D Sbjct: 241 ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNQMKIID 278
>FUS_HRSVR (P11209) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 574 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -3 Query: 267 TSVHL*RGRQDRFLGFVIGKNLAAAVGTGCSPALGVEAPV 148 T+V L + R+ RFLGF++G A A G S L +E V Sbjct: 125 TNVTLSKKRKRRFLGFLLGVGSAIASGIAVSKVLHLEGEV 164
>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)| Length = 4910 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +1 Query: 256 VDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDD 435 +D N +E D+ + R KEG DE+P E DG ++ + ++A+E +D Sbjct: 4177 LDGKNQEE--DVQAAENDEQQRDNKEGGDEDPNAPE------DGDEEIENDENAEEENDV 4228 Query: 436 GKQ 444 G+Q Sbjct: 4229 GEQ 4231
>RNC_STRCO (Q9ZBQ7) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 272 Score = 30.4 bits (67), Expect = 4.3 Identities = 22/82 (26%), Positives = 34/82 (41%) Frame = +1 Query: 73 DLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPPPS 252 +L+A EG G P E PD ++F A +R ++G+G + E E+ Sbjct: 187 ELTATEGLGVPEYLVT---ETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAW 243 Query: 253 QVDAGNVDECKDIGVDVVPAEP 318 + DE D V A+P Sbjct: 244 RSIRAAADERAKATADAVDADP 265
>CHSY_PERFR (O04111) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone| synthase) Length = 391 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG + L ++G+ L AAAV G P +GVE P+ Sbjct: 177 LAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVIVGSDPVVGVERPL 236 Query: 147 F 145 F Sbjct: 237 F 237
>TSP2_MOUSE (Q03350) Thrombospondin-2 precursor| Length = 1172 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 199 GEVLADHETEEPILPPPSQVDAGN---VDECKDIGVDVVPAEPRSTKEGKDEEPTVTELL 369 G+ + DH P++ P Q+D N D+C D D+ + + +D P ++ Sbjct: 828 GDGVGDHCDNCPLMHNPDQIDQDNDLVGDQC-DNNEDI---DDDGHQNNQDNCPYISNSN 883 Query: 370 VSDGDGQDKFQACDDAKEVDDDG 438 +D D K ACD + D+DG Sbjct: 884 QADHDNDGKGDACD--SDDDNDG 904
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -2 Query: 268 YQRPLVTGEAGSVPRFRDRQEPRRCRGHGMQP-CSRRRSSCVRQAAPPSPTRPGRKERLL 92 +Q+P+V G P+ Q+P + G+QP + + V Q P PG ++ + Sbjct: 472 FQQPMVPQRTGMQPQMTGFQQPMMPQRTGLQPQMTGFQQPMVPQRTGMQPMMPGLQQPMA 531 Query: 91 PPWQTNRRTQPQR 53 P + PQR Sbjct: 532 PQRTGMQPMMPQR 544 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 262 RPLVTGEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSC---VRQAAPPSPTRPGRKERLL 92 +P++ G P+ Q+P + GMQP + +R+ + Q P PG ++ + Sbjct: 643 QPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMA 702 Query: 91 PPWQTNRRTQPQR 53 P + PQR Sbjct: 703 PQRTGMQPMMPQR 715
>PYC_HUMAN (P11498) Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1)| (Pyruvic carboxylase) (PCB) Length = 1178 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +1 Query: 7 HEAAAASNRFRFDPLAFAVASVDLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASR 186 HEA SN + F P+ F A GGG ++ V +E L + + Y+E+ A Sbjct: 178 HEAHEFSNTYGF-PIIFKAAY-------GGGGRGMRVVHSYEELEENYTRAYSEALA--- 226 Query: 187 AHGSGEVLADHETEEP 234 A G+G + + E+P Sbjct: 227 AFGNGALFVEKFIEKP 242
>GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione peroxidase, nuclear| (EC 1.11.1.12) (GPX-4) Length = 253 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = -2 Query: 199 RCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQPQRLE 47 RCR G P RRR RQ+ P RK R + RR +P+R+E Sbjct: 11 RCRQRGGSPRGRRRRGPGRQSPRKRPGPRRRKARA----RRRRRARPRRME 57
>UR2R_HUMAN (Q9UKP6) Urotensin II receptor (UR-II-R) (G-protein coupled| receptor 14) Length = 389 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = -2 Query: 283 YTRQHYQRPLVTGEAGSVPRFRDRQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRP 113 + R + P G G VP + R +RC G + CS + + + AP +P RP Sbjct: 325 HLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSL-VLAPAAPARP 380
>CHSB_SOLTU (Q43163) Chalcone synthase 1B (EC 2.3.1.74) (Naringenin-chalcone| synthase 1B) Length = 389 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG + L ++G+ L AAA+ G P +GVE P+ Sbjct: 177 LAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIMGSDPIIGVERPL 236 Query: 147 FVRQHLPVPHVLDGRSASSLHGRQI 73 F V D A H R++ Sbjct: 237 FELVSAAQTLVPDSEGAIDGHLREV 261
>CHSA_SOLTU (Q41436) Chalcone synthase 1A (EC 2.3.1.74) (Naringenin-chalcone| synthase 1A) Length = 389 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG + L ++G+ L AAA+ G P +GVE P+ Sbjct: 177 LAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIMGSDPIIGVERPL 236 Query: 147 FVRQHLPVPHVLDGRSASSLHGRQI 73 F V D A H R++ Sbjct: 237 FELVSAAQTLVPDSEGAIDGHLREV 261
>CHS1_LYCES (P23418) Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone| synthase 1) Length = 389 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG + L ++G+ L AAA+ G P +GVE P+ Sbjct: 177 LAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIIGSDPIIGVERPL 236 Query: 147 FVRQHLPVPHVLDGRSASSLHGRQI 73 F V D A H R++ Sbjct: 237 FELVSAAQTLVPDSEGAIDGHLREV 261
>SYEP_HUMAN (P07814) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1440 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Frame = -2 Query: 214 RQEPRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPG---RKERLLPPWQTNRRTQPQRLED 44 R++P + +G G+ S P TR G +KE L W + T+ + +E Sbjct: 914 RKDPSKNQGGGLSS-----SGAGEGQGPKKQTRLGLEAKKEENLADWYSQVITKSEMIEY 968 Query: 43 QT*TGCLLLRPRA 5 +GC +LRP A Sbjct: 969 HDISGCYILRPWA 981
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = -2 Query: 202 RRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQPQR 53 RR R P RRRS PP P P R+ PP + + P R Sbjct: 557 RRRRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPR 606
>PRP1_ECOLI (P55798) Serine/threonine-protein phosphatase 1 (EC 3.1.3.16)| Length = 218 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 115 DVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADH 219 DV++W+ D H+ ++ SR R G G ADH Sbjct: 148 DVYEWQKDVDLHQVLWSRSRLGERQKGQGITGADH 182
>DMP1_HUMAN (Q13316) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 513 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/59 (33%), Positives = 27/59 (45%) Frame = +1 Query: 295 VDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVES 471 VD P ST+E + EE V G G D + D E+DD+G Q E++ S Sbjct: 174 VDSKPEGGDSTQESESEEHWV-------GGGSDGESSHGDGSELDDEGMQSDDPESIRS 225
>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3| p110) (eIF3c) Length = 935 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 340 DEEPTVTELLVSDGDGQDKFQACDDAKEVDDDGKQMAAAEAVE 468 D+EP+ TE +D +G+ K+ A +A + DDD Q ++ + Sbjct: 23 DDEPSDTEPAPTDPNGKSKYLAGGNADDSDDDDGQKRVVKSAK 65
>MYC1_XENLA (P06171) Myc-A protein (Myc I protein) (C-Myc I)| Length = 419 Score = 29.6 bits (65), Expect = 7.3 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 235 ILPPPSQVDAGNVDE-CKDIGVDVVPAEPRSTKEGKDEEPTVTELLVSDGDGQDKFQACD 411 + P P N C+D+ ++ P S+ +EEP +D+ + CD Sbjct: 192 VFPYPLNDSISNASSPCQDLILETPPISSNSSSSESEEEP------------EDEDEDCD 239 Query: 412 DAKEVD--DDGKQMAAAEAVESA 474 + +E+D K+ +A++ VES+ Sbjct: 240 EEEEIDVVTVEKRQSASKRVESS 262
>SYV_MYCTU (P67599) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 876 Score = 29.6 bits (65), Expect = 7.3 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -3 Query: 237 DRFLGFVIGKNLAAAVGTGCSPALGVEAP----VFVRQHLPVPHVLDGRSASSLHGRQID 70 DR L V +++ GTG P + VR LP+P +LD + G + D Sbjct: 251 DRELAIVADEHVDPEFGTGAVKVTPAHDPNDFEIGVRHQLPMPSILDTKGRIVDTGTRFD 310 Query: 69 GRNR 58 G +R Sbjct: 311 GMDR 314
>SYV_MYCBO (P67600) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 876 Score = 29.6 bits (65), Expect = 7.3 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -3 Query: 237 DRFLGFVIGKNLAAAVGTGCSPALGVEAP----VFVRQHLPVPHVLDGRSASSLHGRQID 70 DR L V +++ GTG P + VR LP+P +LD + G + D Sbjct: 251 DRELAIVADEHVDPEFGTGAVKVTPAHDPNDFEIGVRHQLPMPSILDTKGRIVDTGTRFD 310 Query: 69 GRNR 58 G +R Sbjct: 311 GMDR 314
>KITH_EBV (P03177) Thymidine kinase (EC 2.7.1.21)| Length = 607 Score = 29.6 bits (65), Expect = 7.3 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = +2 Query: 80 LPWREEALLPSRTCGTGRCCLTNTGASTPRAGLHPVPTAAARFLPITKPRNRSCLP 247 +P R +A + S T + T+ + PR P P P KPR+R C P Sbjct: 82 VPCRTQAAVTSNTGNSPGSRHTSCPFTLPRGAQPPAPAHQKPTAPTPKPRSRECGP 137
>THIG_STRCO (Q9S2N4) Thiazole biosynthesis protein thiG| Length = 264 Score = 29.6 bits (65), Expect = 7.3 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -3 Query: 222 FVIGKNLAAA---VGTGCSPALGVEAPVFVRQHLPVPHVLDGRSASSLHGRQIDGRNRKG 52 FV+G A+ +GTG +P+L V V + V R +S+HG + R G Sbjct: 6 FVLGGTTYASRLIMGTGGAPSLDVLERALVASGTELTTVAMRRVNASVHGSVLSVLERLG 65 Query: 51 *RIKPEPVAC 22 R+ P C Sbjct: 66 IRVLPNTAGC 75
>SHC1_MOUSE (P98083) SHC transforming protein 1 (SH2 domain protein C1) (Src| homology 2 domain-containing transforming protein C1) Length = 579 Score = 29.6 bits (65), Expect = 7.3 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 11/94 (11%) Frame = +1 Query: 70 VDLSAMEGGGAPSVQDVWDWEVLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPP- 246 VD+ EG P+ LP S + + H +G DHE + +LPP Sbjct: 364 VDMRLREGAARPT---------LPSAQMSSHLGATLPIGQHAAG----DHEVRKQMLPPP 410 Query: 247 ----------PSQVDAGNVDECKDIGVDVVPAEP 318 PS V+ N+D+ + G P P Sbjct: 411 PCPGRELFDDPSYVNIQNLDKARQAGGGAGPPNP 444
>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor| Length = 616 Score = 29.6 bits (65), Expect = 7.3 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = -2 Query: 205 PRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQPQRLEDQ 41 P R +QP S R A PPS PGR+ + Q + +RL++Q Sbjct: 547 PNYIRPRTLQPPSALRRRHYHHALPPSRHYPGREAQARHAQQEEAEAEERRLQEQ 601
>GPX42_RAT (Q91XR8) Phospholipid hydroperoxide glutathione peroxidase, nuclear| (EC 1.11.1.12) (GPX-4) Length = 253 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -2 Query: 199 RCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRTQPQRLE 47 RCR G P RRR RQ+ P R+ R + RR +P+R+E Sbjct: 11 RCRQRGRSPGGRRRREPGRQSPRKRPGPRRRRARA----RRRRRARPRRME 57
>CHS2_DAUCA (Q9ZS40) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone| synthase 2) (DcCHS2) Length = 397 Score = 29.6 bits (65), Expect = 7.3 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG D L ++G+ L AAAV G P L VE P+ Sbjct: 181 LAENNTGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSVERPL 240 Query: 147 F 145 F Sbjct: 241 F 241
>HSP1_RHIFE (Q8WNZ7) Sperm protamine P1| Length = 51 Score = 29.6 bits (65), Expect = 7.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 226 RFRDRQEPRRCRGHGMQPCSRRRSSCVRQ 140 R R R+ +RCR + C RRR +C R+ Sbjct: 11 RSRSRRRRQRCRRRRRRSCGRRRRACYRR 39
>TOP2_PENCH (Q9Y8G8) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1587 Score = 29.6 bits (65), Expect = 7.3 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Frame = +1 Query: 166 ESRAASRAHGSGEVLADHETEEPILPPPSQVDAGNVDECKDIGVDVVP--------AEPR 321 +S AA + G L + P PS D G+ D+ D ++++P +EP+ Sbjct: 1256 KSAAAKKTESKGGGLLSFLGKSSAKPKPSPADGGDSDD--DFDMEIMPKKSRGAPKSEPK 1313 Query: 322 STKEGKDEEPTVTELLVSDGD 384 + + KDE+ ++++ D D Sbjct: 1314 ADPKPKDED---EDIVMEDSD 1331
>YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I| Length = 886 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 242 LPRHKWTLVMLTSVRTSASTSCRPSPDQLKR 334 +PR TL+ LT VRT+AS +P P +R Sbjct: 305 IPRPVSTLIPLTQVRTTASNVIKPRPQTTER 335
>SYV_NOCFA (Q5Z048) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 893 Score = 29.3 bits (64), Expect = 9.6 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Frame = -3 Query: 336 TLFS*SGLGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNLAAAVGTGCSPALGVE 157 T+ + + H D L+ T H GRQ + V + G+G Sbjct: 235 TMLGDTAVAVHPDDPRYRDLIGTTLEHPITGRQ---IPIVADDYVDPEFGSGAVKITPAH 291 Query: 156 AP----VFVRQHLPVPHVLDGRSASSLHGRQIDGRNRKG*RIK 40 P + +R +LP+P ++D R + G + DG +R R+K Sbjct: 292 DPNDFEIGLRHNLPMPTIMDERGRIANTGTEFDGMDRFEARVK 334
>CHSY_PETCR (P16107) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone| synthase) Length = 398 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -3 Query: 315 LGRHDVDADVLTLVNITSVHL*RGRQDRFLGFVIGKNL----AAAVGTGCSPALGVEAPV 148 L ++ A VL + + + RG D L ++G+ L AAAV G P L VE P+ Sbjct: 182 LAENNAGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSVERPL 241 Query: 147 F 145 F Sbjct: 242 F 242
>ZDS_MAIZE (Q9ZTP4) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 570 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -2 Query: 205 PRRCR-GHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPP 86 PRR R G G+ P RR S+ ++ SPT R +RL PP Sbjct: 16 PRRARPGTGLVP-PRRASAVAARSTVTSPTWRQRSQRLFPP 55
>HSF1_CHICK (P38529) Heat shock factor protein 1 (HSF 1) (Heat shock| transcription factor 1) (HSTF 1) (HSF 3A) (HSTF 3A) Length = 491 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = +1 Query: 196 SGEVLADHETEEPILPPPSQVDAGNVDECKDIGVDVVPAEPRSTKEGKDEEPTVTELLVS 375 SG +++D E PS +G++DE V + P ++ K+ EP+ T Sbjct: 266 SGPIISD--VTELAQSSPSASPSGSLDERSSPVVRIKEEPPSPSRSPKENEPSTTTAAAG 323 Query: 376 DGDGQDKFQ------ACDDAKEVDD 432 + Q + Q AC D E++D Sbjct: 324 NSTEQPQPQEKCLSVACLDKNELND 348
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 29.3 bits (64), Expect = 9.6 Identities = 17/47 (36%), Positives = 17/47 (36%) Frame = -2 Query: 205 PRRCRGHGMQPCSRRRSSCVRQAAPPSPTRPGRKERLLPPWQTNRRT 65 PR G QP S V P P PGR LPP RT Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT 412
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 2/96 (2%) Frame = +1 Query: 142 DEHRSFYAESRAASRAHGSGEVLADHETEEPILPPPSQVDAGNVDECKDIGVDVVPAEPR 321 DE + AE A + G + H+ + + P + + ++C+ I + V EP Sbjct: 213 DEGKLHSAEEAACEFSEGIRNI-EHHQCSDDLNPTENHATERHPEKCQSISISNVCVEPC 271 Query: 322 STKEGKD--EEPTVTELLVSDGDGQDKFQACDDAKE 423 T + T + LL+ D +K + C+ K+ Sbjct: 272 GTDAHASSLQPETSSLLLIEDRMNAEKAEFCNKTKQ 307
>AMP_IMPBA (O24006) Antimicrobial peptides precursor (IB-AMP) [Contains: Basic| peptide AMP3 (IB-AMP3); Basic peptide AMP1-1 (IB-AMP1-1); Basic peptide AMP1-2 (IB-AMP1-2); Basic peptide AMP1-3 (IB-AMP1-3); Basic peptide AMP2 (IB-AMP2); Basic peptide AMP4 ( Length = 333 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -2 Query: 259 PLVTGEAGSVPRFRDRQEPRRCRGHG--MQPCSRRRSSCVRQAAPPSPTRPGRKERLLPP 86 P + +A P + + Q RRC G G + C R S+ + A P PG+ R Sbjct: 181 PEASEKAQEGPVYSEDQWGRRCCGWGPGRRYCVRWCSNAADEVATPEDVEPGQYGRRCCN 240 Query: 85 WQTNRR 68 W RR Sbjct: 241 WGPGRR 246
>NOP12_YEAST (Q08208) Nucleolar protein 12| Length = 459 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +1 Query: 133 VLPDEHRSFYAESRAASRAHGSGEVLADHETEEPILPPPSQV-DAGNVDECKDIGVDVVP 309 VLPD + A S ++D +TEE LP + + DE +D+ Sbjct: 44 VLPDSKKRERAAEADQEEKEASKPDVSDEQTEEVALPKVKKAKKSKRNDEDEDLEARYYA 103 Query: 310 AEPRSTKEGKDEEPTVTE 363 E +D++PTVT+ Sbjct: 104 KLLNEEAEAEDDKPTVTK 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.131 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,295,973 Number of Sequences: 219361 Number of extensions: 1432968 Number of successful extensions: 4480 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 4249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4465 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
