ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13h24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... 86 4e-17
2UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... 81 9e-16
3UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... 81 9e-16
4UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... 80 1e-15

>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   KKYXYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF 120
           KKY YTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF
Sbjct: 103 KKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF 142



to top

>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   KKYXYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF 120
           KKY YTIDDDCFVAKDPSGKDINALEQHIKNLL PSTP F
Sbjct: 93  KKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHF 132



to top

>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   KKYXYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF 120
           KKY YTIDDDCFVAKDPSGKDINALEQHIKNLL PSTP F
Sbjct: 97  KKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHF 136



to top

>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   KKYXYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFF 120
           KKY YTIDDDCFVAKDP+G +INALEQHIKNLLSPSTPFF
Sbjct: 96  KKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFF 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,945,732
Number of Sequences: 219361
Number of extensions: 131766
Number of successful extensions: 386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top