| Clone Name | basd13h23 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 377 bits (968), Expect = e-104 Identities = 178/186 (95%), Positives = 181/186 (97%) Frame = +2 Query: 44 AAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYEL 223 ++ PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDPTK IKVPEGFDYEL Sbjct: 10 SSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYEL 69 Query: 224 YNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 403 YNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ Sbjct: 70 YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 129 Query: 404 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQL 583 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGA TAVSHGLWLNIPDYDAPTQL Sbjct: 130 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQL 189 Query: 584 VKPLER 601 VKP ER Sbjct: 190 VKPKER 195
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 373 bits (957), Expect = e-103 Identities = 174/184 (94%), Positives = 180/184 (97%) Frame = +2 Query: 50 APSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYELYN 229 A +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+IKVPEGFDYELYN Sbjct: 2 AAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYN 61 Query: 230 RNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 409 RND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI Sbjct: 62 RNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 121 Query: 410 KNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVK 589 KNLL PSTP FFNTLYDPYR+GADFVRGYPFS+REGAPTAVSHGLWLNIPDYDAPTQLVK Sbjct: 122 KNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVK 181 Query: 590 PLER 601 P ER Sbjct: 182 PHER 185
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 368 bits (945), Expect = e-102 Identities = 173/188 (92%), Positives = 179/188 (95%) Frame = +2 Query: 38 AMAAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 217 A ++ TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+I VPEGFDY Sbjct: 2 AGSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDY 61 Query: 218 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 397 ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL Sbjct: 62 ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 121 Query: 398 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 577 EQHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REGA TAVSHGLWLNIPDYDAPT Sbjct: 122 EQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPT 181 Query: 578 QLVKPLER 601 QLVKP ER Sbjct: 182 QLVKPRER 189
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 367 bits (943), Expect = e-101 Identities = 174/188 (92%), Positives = 180/188 (95%), Gaps = 1/188 (0%) Frame = +2 Query: 41 MAAAPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 217 MA+ P TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDP+KVIKVPEGFDY Sbjct: 1 MASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDY 60 Query: 218 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 397 ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDP+G +INAL Sbjct: 61 ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINAL 120 Query: 398 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 577 EQHIKNLLSPSTPFFFNTLYDPYREG DFVRGYPFSLREG PTAVSHGLWLNIPDYDAPT Sbjct: 121 EQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPT 180 Query: 578 QLVKPLER 601 QLVKP ER Sbjct: 181 QLVKPHER 188
>Y4YL_RHISN (P55720) Probable translocation protein y4yL| Length = 222 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = +3 Query: 444 SILCTTHTVRVLILFVGTPSAFVRVPQLLFLMGSGLTFQTM 566 ++L T + +L+L V T +AFV+V +LFL+ + L QT+ Sbjct: 10 ALLAITAALGLLVLAVVTTTAFVKVSVVLFLVRNALGTQTI 50
>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) Length = 644 Score = 30.0 bits (66), Expect = 5.4 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +1 Query: 76 RAGHRHPDDPQPRLP--RDVAALLPALPPHHRAGRRPD 183 +A + P +P P+ P R + LP PP RAG PD Sbjct: 4 KAENLRPSEPAPQPPEGRTLQGQLPGAPPAQRAGSPPD 41
>NUSG_BUCAP (Q8KA65) Transcription antitermination protein nusG| Length = 181 Score = 30.0 bits (66), Expect = 5.4 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 23 LPRLAAMAAAPS---TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVI 193 +PR+ S +P+ E+DI+I +R + + F+P +I V DG Sbjct: 86 VPRVLGFIGGKSDKPSPISDKEVDIIINRLRQIGDKPRPKTLFEPGEMIRVNDGPFADFN 145 Query: 194 KVPEGFDYE 220 V E DYE Sbjct: 146 GVVEEVDYE 154
>Y024_BORBU (O51055) Hypothetical protein BB0024| Length = 379 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Frame = +2 Query: 182 TKVIKVPEGFDYELYNRNDVNRILGPKASCISFKD-----SACRCFGYMVSKKKYIYTI 343 T +KVP GF E++ N + + G S +D + F Y V+K + IYTI Sbjct: 30 TSTLKVPNGFKVEIFLNNTIEKPRG----ITSDQDGNIFIGSGSTFAYFVTKNRKIYTI 84
>Y868_HAEIN (Q57022) Putative glycosyl transferase HI0868 (EC 2.-.-.-)| Length = 250 Score = 29.3 bits (64), Expect = 9.2 Identities = 24/100 (24%), Positives = 43/100 (43%) Frame = +2 Query: 107 NLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYELYNRNDVNRILGPKASCISFKD 286 N L +Q LI++ DG K I++ + N D ++ + + + Sbjct: 20 NQGILSCLNQSYQNIELILIDDGSTDKSIEI-------INNIIDKDKRVKLFFTPTNQGP 72 Query: 287 SACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQH 406 +A R G ++ YI +D D F+A D K +N + Q+ Sbjct: 73 AAARNIGLEKAQGDYITFLDSDDFIANDKLEKQLNFMLQN 112
>NCTR1_RAT (Q9Z0H5) Natural cytotoxicity triggering receptor 1 precursor| (Natural killer cell p46-related protein) (NKp46) (NK-p46) (Rat-activating receptor 1) (rAR-1) (Lymphocyte antigen 94 homolog) (NK receptor KILR-1) (NKACTR) Length = 325 Score = 29.3 bits (64), Expect = 9.2 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 10/78 (12%) Frame = -2 Query: 559 WNVKPEPMRNSSWGTLTKAEGVPTNKISTLTVWV---------VQSIEEKWS*RAQKVLN 407 W+ EP+ G + PT+ +S+L W +Q W AQ ++ Sbjct: 199 WSFPSEPVTLLITGEVENTSLAPTDPVSSLDYWEFDLSTKESGLQKDSAFWDHTAQNLIR 258 Query: 406 VLLKCIDVLS-*WILSNE 356 + L CI V++ W+L+ + Sbjct: 259 IGLACIIVMALVWLLAED 276
>POL_HV1OY (P20892) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein| p17 (MA); Capsid protein p24 (CA); p2 spacer peptide; Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6 pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse trans Length = 1433 Score = 29.3 bits (64), Expect = 9.2 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -2 Query: 589 LDKLGRGIIVWNVKPEPMRNSSWGTLTKAEGVPTNKISTLTVWVVQSIEE 440 L K G+G + + EP +N G + G TN + LT V + +E Sbjct: 914 LQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITQE 963 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,273,353 Number of Sequences: 219361 Number of extensions: 1428712 Number of successful extensions: 4554 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4553 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)