ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13h23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... 377 e-104
2UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... 373 e-103
3UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... 368 e-102
4UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... 367 e-101
5Y4YL_RHISN (P55720) Probable translocation protein y4yL 30 4.1
6INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase... 30 5.4
7NUSG_BUCAP (Q8KA65) Transcription antitermination protein nusG 30 5.4
8Y024_BORBU (O51055) Hypothetical protein BB0024 30 7.0
9Y868_HAEIN (Q57022) Putative glycosyl transferase HI0868 (EC 2.-... 29 9.2
10NCTR1_RAT (Q9Z0H5) Natural cytotoxicity triggering receptor 1 pr... 29 9.2
11POL_HV1OY (P20892) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains:... 29 9.2

>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score =  377 bits (968), Expect = e-104
 Identities = 178/186 (95%), Positives = 181/186 (97%)
 Frame = +2

Query: 44  AAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYEL 223
           ++ PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDPTK IKVPEGFDYEL
Sbjct: 10  SSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYEL 69

Query: 224 YNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 403
           YNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ
Sbjct: 70  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 129

Query: 404 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQL 583
           HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGA TAVSHGLWLNIPDYDAPTQL
Sbjct: 130 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQL 189

Query: 584 VKPLER 601
           VKP ER
Sbjct: 190 VKPKER 195



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>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score =  373 bits (957), Expect = e-103
 Identities = 174/184 (94%), Positives = 180/184 (97%)
 Frame = +2

Query: 50  APSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYELYN 229
           A +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+IKVPEGFDYELYN
Sbjct: 2   AAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYN 61

Query: 230 RNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 409
           RND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI
Sbjct: 62  RNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 121

Query: 410 KNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVK 589
           KNLL PSTP FFNTLYDPYR+GADFVRGYPFS+REGAPTAVSHGLWLNIPDYDAPTQLVK
Sbjct: 122 KNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVK 181

Query: 590 PLER 601
           P ER
Sbjct: 182 PHER 185



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>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score =  368 bits (945), Expect = e-102
 Identities = 173/188 (92%), Positives = 179/188 (95%)
 Frame = +2

Query: 38  AMAAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 217
           A ++   TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+I VPEGFDY
Sbjct: 2   AGSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDY 61

Query: 218 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 397
           ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL
Sbjct: 62  ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 121

Query: 398 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 577
           EQHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REGA TAVSHGLWLNIPDYDAPT
Sbjct: 122 EQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPT 181

Query: 578 QLVKPLER 601
           QLVKP ER
Sbjct: 182 QLVKPRER 189



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>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score =  367 bits (943), Expect = e-101
 Identities = 174/188 (92%), Positives = 180/188 (95%), Gaps = 1/188 (0%)
 Frame = +2

Query: 41  MAAAPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 217
           MA+ P  TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDP+KVIKVPEGFDY
Sbjct: 1   MASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDY 60

Query: 218 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 397
           ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDP+G +INAL
Sbjct: 61  ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINAL 120

Query: 398 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 577
           EQHIKNLLSPSTPFFFNTLYDPYREG DFVRGYPFSLREG PTAVSHGLWLNIPDYDAPT
Sbjct: 121 EQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPT 180

Query: 578 QLVKPLER 601
           QLVKP ER
Sbjct: 181 QLVKPHER 188



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>Y4YL_RHISN (P55720) Probable translocation protein y4yL|
          Length = 222

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +3

Query: 444 SILCTTHTVRVLILFVGTPSAFVRVPQLLFLMGSGLTFQTM 566
           ++L  T  + +L+L V T +AFV+V  +LFL+ + L  QT+
Sbjct: 10  ALLAITAALGLLVLAVVTTTAFVKVSVVLFLVRNALGTQTI 50



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>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 76  RAGHRHPDDPQPRLP--RDVAALLPALPPHHRAGRRPD 183
           +A +  P +P P+ P  R +   LP  PP  RAG  PD
Sbjct: 4   KAENLRPSEPAPQPPEGRTLQGQLPGAPPAQRAGSPPD 41



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>NUSG_BUCAP (Q8KA65) Transcription antitermination protein nusG|
          Length = 181

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 23  LPRLAAMAAAPS---TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVI 193
           +PR+       S   +P+   E+DI+I  +R +      +  F+P  +I V DG      
Sbjct: 86  VPRVLGFIGGKSDKPSPISDKEVDIIINRLRQIGDKPRPKTLFEPGEMIRVNDGPFADFN 145

Query: 194 KVPEGFDYE 220
            V E  DYE
Sbjct: 146 GVVEEVDYE 154



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>Y024_BORBU (O51055) Hypothetical protein BB0024|
          Length = 379

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +2

Query: 182 TKVIKVPEGFDYELYNRNDVNRILGPKASCISFKD-----SACRCFGYMVSKKKYIYTI 343
           T  +KVP GF  E++  N + +  G      S +D      +   F Y V+K + IYTI
Sbjct: 30  TSTLKVPNGFKVEIFLNNTIEKPRG----ITSDQDGNIFIGSGSTFAYFVTKNRKIYTI 84



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>Y868_HAEIN (Q57022) Putative glycosyl transferase HI0868 (EC 2.-.-.-)|
          Length = 250

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +2

Query: 107 NLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYELYNRNDVNRILGPKASCISFKD 286
           N   L      +Q   LI++ DG   K I++       + N  D ++ +    +  +   
Sbjct: 20  NQGILSCLNQSYQNIELILIDDGSTDKSIEI-------INNIIDKDKRVKLFFTPTNQGP 72

Query: 287 SACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQH 406
           +A R  G   ++  YI  +D D F+A D   K +N + Q+
Sbjct: 73  AAARNIGLEKAQGDYITFLDSDDFIANDKLEKQLNFMLQN 112



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>NCTR1_RAT (Q9Z0H5) Natural cytotoxicity triggering receptor 1 precursor|
           (Natural killer cell p46-related protein) (NKp46)
           (NK-p46) (Rat-activating receptor 1) (rAR-1) (Lymphocyte
           antigen 94 homolog) (NK receptor KILR-1) (NKACTR)
          Length = 325

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = -2

Query: 559 WNVKPEPMRNSSWGTLTKAEGVPTNKISTLTVWV---------VQSIEEKWS*RAQKVLN 407
           W+   EP+     G +      PT+ +S+L  W          +Q     W   AQ ++ 
Sbjct: 199 WSFPSEPVTLLITGEVENTSLAPTDPVSSLDYWEFDLSTKESGLQKDSAFWDHTAQNLIR 258

Query: 406 VLLKCIDVLS-*WILSNE 356
           + L CI V++  W+L+ +
Sbjct: 259 IGLACIIVMALVWLLAED 276



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>POL_HV1OY (P20892) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein|
            p17 (MA); Capsid protein p24 (CA); p2 spacer peptide;
            Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6
            pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
            trans
          Length = 1433

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 589  LDKLGRGIIVWNVKPEPMRNSSWGTLTKAEGVPTNKISTLTVWVVQSIEE 440
            L K G+G   + +  EP +N   G   +  G  TN +  LT  V +  +E
Sbjct: 914  LQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITQE 963


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,273,353
Number of Sequences: 219361
Number of extensions: 1428712
Number of successful extensions: 4554
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4553
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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