>FA21C_PONPY (Q5RDC1) Protein FAM21C|
          Length = 1340

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
 Frame = -3

Query: 560 GLQVLDCLLHCLDVNAGQLACRRRDNGAAFPLL----DVWQEQP-RLLLGGEQRHTWLVA 396
           GLQVLD     LD+ AG       D      L+    D++ ++P   L+G +        
Sbjct: 139 GLQVLDSAFEQLDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDV 198

Query: 395 GVGEL--DRGGVGRHDAGRVVD-EAGELSRSSDEQIGRLLTDD 276
           G+GEL  + G VG  D G +VD E  +    SDE       +D
Sbjct: 199 GLGELSSEEGSVG-SDRGSIVDTEEEKEEEESDEDFAHHSDND 240

>FA21C_HUMAN (Q9Y4E1) Protein FAM21C|
          Length = 1320

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
 Frame = -3

Query: 560 GLQVLDCLLHCLDVNAGQLACRRRDNGAAFPLL----DVWQEQP-RLLLGGEQRHTWLVA 396
           GLQVLD     LD+ AG       D      L+    D++ ++P   L+G +        
Sbjct: 140 GLQVLDSAFEQLDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDV 199

Query: 395 GVGEL--DRGGVGRHDAGRVVD-EAGELSRSSDE 303
           G+GEL  + G VG  D G +VD E  +    SDE
Sbjct: 200 GLGELSSEEGSVG-SDRGSIVDTEEEKEEEESDE 232

>RL1_MYCPU (Q98RJ8) 50S ribosomal protein L1|
          Length = 229

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 9   PRSGCPSPXKLRAVVEDKYNRAGVEKGKYVVIHGIESDSVANMKSRGDDDCL 164
           P++G  +P   +AVVE K  +A     KY ++H     S+   KS  DD  L
Sbjct: 142 PKTGTVTPNPDKAVVEIKKGKANYRADKYGIVH-----SLIGKKSMSDDQLL 188

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 5/178 (2%)
 Frame = -1

Query: 556 SKSLTAFFTASMSMPASLPVADATTVQLFLSSTYGRNSLAFSLEENSATHGLSRALASWT 377
           S S+T+   AS S+ +S   + +TT     SS+   NS   +   +SAT   S +L+S T
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSSSLASSS--TNSTTSATPTSSAT---SSSLSS-T 184

Query: 376 AAVLVATTP--AESLMRQVSCPGVVMNR*AVXXXXXXXXXXXXXXCGITNRGLSPLPPEL 203
           AA   AT+   A S +   +      +  +                 + +   +      
Sbjct: 185 AASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSS 244

Query: 202 ISLAISAHSSRGRRQSSSPLDFMLATESDSMPWMTTYLPFSTPARLYLS---STTARS 38
           IS  +S+ +      S++      AT S +    ++ LP STP+   LS   STTA S
Sbjct: 245 ISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATS 302

>ZIF1_CAEEL (P34482) Zinc finger-interacting factor 1 (Protein zif-1)|
          Length = 489

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   LVPRSGCPSPXKLRAVVEDKYNRAGV-EKGKYVVIHGIESDSVANMKSRGDDDCLLPLEL 179
           L P+   P     R V + + N   V EKG+   IH +  +++    +RGD      +EL
Sbjct: 272 LDPQIDNPETKPHRGVFQLRVNLKDVIEKGEKDAIHAVNPETIETRFNRGD------IEL 325

Query: 180 WAEIAKEI 203
           W +I+ E+
Sbjct: 326 WRKISDEL 333

>RS9_TREPA (O83987) 30S ribosomal protein S9|
          Length = 129

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = -3

Query: 530 CLDVNAGQLACRRRDNGAAFPLLDVWQ--EQPRLLLGGEQRHTWL--VAGVGELDRGGVG 363
           C+ +  G +   RRD GA FP  +  +   +P      E+R+  +  V G G   + G  
Sbjct: 19  CIRMGNGNVTVNRRDVGAYFPTAEQLRRVREPLFATANERRYDVIVNVYGGGLDGQAGAC 78

Query: 362 RHDAGRVVDEAGELSRSSDEQIGRLLTDD 276
            H   R +  A + S  +  + G LLT D
Sbjct: 79  AHGIARALVRA-DASNQASLRAGGLLTRD 106

>VATE_CHLPN (Q9Z995) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase|
           subunit E)
          Length = 208

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = +3

Query: 360 ATNTAAVQLANARDKPCVALFSSKEKARLFLPYVEER-----KSCTVVASATGKLAGIDI 524
           A + AA  L NA+++    +  ++E+AR  L   EER     K   V  S  GK A   +
Sbjct: 25  AEDEAAALLHNAKEQAKRIIQEAQEEARKILETAEERAHQKIKQGEVALSQAGKRA---L 81

Query: 525 EAVKKAVKD 551
           EA+K+AV++
Sbjct: 82  EALKQAVEN 90

>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -3

Query: 488  DNGAAFPLLDVWQEQPRLLLGGEQRHTWLVAGVGELDRGGVGRHDAGRVVDEAGELSRSS 309
            D GA   L          + GGE      +A VG +D  G G     ++V +AG     +
Sbjct: 917  DGGAGVALQSAKASGTLHVQGGEHLDLGTLAAVGAVDVNGTGDVRVAKLVSDAG-----A 971

Query: 308  DEQIGRLLTDDFLD 267
            D Q GR +T   +D
Sbjct: 972  DLQAGRSMTLGIVD 985

>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 1/187 (0%)
 Frame = -1

Query: 580 ANAKLGAGSKSLTAFFTASMSMPASLPVADATTVQLFLSSTYGRNSLAFSL-EENSATHG 404
           +++     S + +A  TA  S  A+ P + ++      SS  G    + S+ +E++  H 
Sbjct: 155 SSSSSSTSSSTSSASPTAGASSTATCPASSSS------SSGNGSGGKSGSIKQEHTEIHS 208

Query: 403 LSRALASWTAAVLVATTPAESLMRQVSCPGVVMNR*AVXXXXXXXXXXXXXXCGITNRGL 224
            S A+++  A+ +++  PAE+     + P                        G T+ G 
Sbjct: 209 SSSAISAAAASTVMSPPPAEATRSSPATP---------EGGGPAGDGSGATGGGNTSGGS 259

Query: 223 SPLPPELISLAISAHSSRGRRQSSSPLDFMLATESDSMPWMTTYLPFSTPARLYLSSTTA 44
           +        +AI+ H + G     S      + E       TT  P  TP    LSS +A
Sbjct: 260 TA------GVAINEHQNNGNGSGGSSRASPDSLEEKPSTTTTTGRPTLTPTNGVLSSASA 313

Query: 43  RSXLGDG 23
            + +  G
Sbjct: 314 GTGISTG 320

>VGLE_BHV1S (Q08101) Glycoprotein E precursor|
          Length = 575

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -2

Query: 510 PACLSPTRQRCSFSSPRRMAGTASPSPWRRTAPHMACRGRW 388
           PACL P   +CSF+SP R + T     + +  P  A  GRW
Sbjct: 286 PACLHPADAQCSFASPYR-SETVYSRLYEQCRPDPA--GRW 323

>HEM11_HORVU (Q42843) Glutamyl-tRNA reductase 1, chloroplast precursor (EC|
           1.2.1.70) (GluTR)
          Length = 527

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +3

Query: 306 ITTPGQLTCLINDSAGVVATNTAAVQLANAR--DKPCVA----LFSSKEKARLFLPYVEE 467
           IT   ++ C  N SAG V+ ++AAV+LA  +     C++    L  + +  +L + ++  
Sbjct: 221 ITAGKRVRCETNISAGAVSVSSAAVELAMMKLPKSECLSARMLLIGAGKMGKLVVKHL-I 279

Query: 468 RKSCTVVASATGKLAGIDIEAVKKAVKDLE 557
            K C  V      +  +D  A+++ +KD+E
Sbjct: 280 AKGCKKVVVVNRSVERVD--AIREEMKDIE 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,009,457
Number of Sequences: 219361
Number of extensions: 1573003
Number of successful extensions: 6280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6277
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)