ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13g24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY863051.1| Zea mays putative methyl-binding domain protein M... 48 0.031
2gb|AY108379.1| Zea mays PCO146110 mRNA sequence 48 0.031
3ref|XM_578879.1| PREDICTED: Rattus norvegicus similar to spermio... 46 0.12
4ref|XM_578846.1| PREDICTED: Rattus norvegicus similar to spermio... 46 0.12
5emb|AL808011.11| Mouse DNA sequence from clone RP23-32O21 on chr... 46 0.12
6ref|XM_590415.2| PREDICTED: Bos taurus similar to HEF-like prote... 42 1.9
7gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome... 42 1.9
8ref|XM_578953.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
9ref|XM_346105.2| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
10ref|XM_229258.2| PREDICTED: Rattus norvegicus similar to Spindli... 42 1.9
11ref|XM_229431.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
12ref|XM_229439.2| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
13ref|XM_578935.1| PREDICTED: Rattus norvegicus similar to Spindli... 42 1.9
14ref|XM_578908.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
15ref|XM_578907.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
16ref|XM_229279.2| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
17ref|XM_225832.3| PREDICTED: Rattus norvegicus similar to Spindli... 42 1.9
18ref|XM_225836.2| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
19ref|XM_225786.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
20ref|XM_578896.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
21ref|XM_229292.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
22ref|XM_346152.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
23ref|XM_346204.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
24ref|XM_578880.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
25ref|XM_578877.1| PREDICTED: Rattus norvegicus similar to Spindli... 42 1.9
26ref|XM_229303.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
27ref|XM_346151.2| PREDICTED: Rattus norvegicus similar to Spindli... 42 1.9
28ref|XM_578863.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
29ref|XM_229422.3| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
30ref|XM_578854.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
31ref|XM_229476.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
32ref|XM_346138.2| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
33ref|XM_578829.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
34ref|XM_578822.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
35ref|XM_229360.2| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
36ref|XM_229255.3| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
37ref|XM_229717.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
38ref|XM_346104.2| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
39ref|XM_578816.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
40ref|XM_229433.3| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
41ref|XM_578813.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
42gb|AY186604.1| Helianthus annuus TIR-NBS-LRR resistance gene can... 42 1.9
43ref|XM_577508.1| PREDICTED: Rattus norvegicus similar to Y-linke... 42 1.9
44ref|XM_577506.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
45ref|XM_222167.1| PREDICTED: Rattus norvegicus similar to spermio... 42 1.9
46gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, co... 42 1.9
47ref|NM_152506.1| Homo sapiens chromosome 21 open reading frame 1... 40 7.5
48ref|XM_813279.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.5
49gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosom... 40 7.5
50emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 o... 40 7.5
51emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chr... 40 7.5
52emb|AL731861.9| Zebrafish DNA sequence from clone BUSM1-46I22 in... 40 7.5
53gb|AC034239.5| Homo sapiens chromosome 5 clone CTD-2325A5, compl... 40 7.5
54dbj|AK057397.1| Homo sapiens cDNA FLJ32835 fis, clone TESTI2003255 40 7.5
55gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromo... 40 7.5
56gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, comple... 40 7.5
57ref|XM_229238.3| PREDICTED: Rattus norvegicus similar to Y-linke... 40 7.5
58ref|XM_222132.3| PREDICTED: Rattus norvegicus similar to Y-linke... 40 7.5
59ref|XM_578815.1| PREDICTED: Rattus norvegicus similar to Y-linke... 40 7.5
60dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09... 40 7.5
61gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049... 40 7.5
62emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13,... 40 7.5
63dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.5
64gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, co... 40 7.5
65gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.5
66dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.5
67dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.5
68emb|AL732405.8| Mouse DNA sequence from clone RP23-149P4 on chro... 40 7.5
69dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 7.5 
>gb|AY863051.1| Zea mays putative methyl-binding domain protein MBD115 mRNA, complete
            cds
          Length = 1456

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 326  cgcatttgctttgaggactgtaagcgtgtttaacccgacagcgc 369
            ||||||||||||||| | ||||| |||| |||||| ||||||||
Sbjct: 1166 cgcatttgctttgagaattgtaatcgtggttaacctgacagcgc 1209
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>gb|AY108379.1| Zea mays PCO146110 mRNA sequence
          Length = 762

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 326 cgcatttgctttgaggactgtaagcgtgtttaacccgacagcgc 369
           ||||||||||||||| | ||||| |||| |||||| ||||||||
Sbjct: 410 cgcatttgctttgagaattgtaatcgtggttaacctgacagcgc 453
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>ref|XM_578879.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
            transcript on the Y 2 (LOC367537), mRNA
          Length = 2019

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 68   ctcctccagcggaggtgaagtcagatg 94
            |||||||||| ||||||||||||||||
Sbjct: 1823 ctcctccagcagaggtgaagtcagatg 1849
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>ref|XM_578846.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC503311), mRNA
          Length = 717

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 68  ctcctccagcggaggtgaagtcagatg 94
           |||||||||| ||||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcagatg 547
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>emb|AL808011.11| Mouse DNA sequence from clone RP23-32O21 on chromosome 4, complete
             sequence
          Length = 147327

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 510   acacagacataatacttatgctactgt 536
             ||||||||||||||||||||| |||||
Sbjct: 60244 acacagacataatacttatgccactgt 60270
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>ref|XM_590415.2| PREDICTED: Bos taurus similar to HEF-like protein (LOC512832), mRNA
          Length = 2358

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 421  gaggtgctgcagggcggcagg 441
            |||||||||||||||||||||
Sbjct: 2298 gaggtgctgcagggcggcagg 2278
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>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence
          Length = 225721

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 293   aaacttggtctctgtgtgcttagga 317
             |||| ||||||||||||||||||||
Sbjct: 98829 aaacatggtctctgtgtgcttagga 98805
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>ref|XM_578953.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC503414), mRNA
          Length = 660

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 464 ctcctccagcagaggtgaagtcaga 488
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>ref|XM_346105.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367363), mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 371 ctcctccagcagaggtgaagtcaga 395
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>ref|XM_229258.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2
           (SPIN-2) (LOC316825), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_229431.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301934), mRNA
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 827 ctcctccagcagaggtgaagtcaga 851
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>ref|XM_229439.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC301944), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_578935.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 3
           (SPIN-3) (Protein DXF34) (LOC503397), mRNA
          Length = 627

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 518 ctcctccagcagaggtgaagtcaga 542
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>ref|XM_578908.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC367582), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_578907.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC503368), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_229279.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC301803), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_225832.3| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2
           (SPIN-2) (LOC291510), mRNA
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_225836.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC307328), mRNA
          Length = 729

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 533 ctcctccagcagaggtgaagtcaga 557
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>ref|XM_225786.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC291516), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_578896.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367566), mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 695 ctcctccagcagaggtgaagtcaga 719
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>ref|XM_229292.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301816), mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 719 ctcctccagcagaggtgaagtcaga 743
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>ref|XM_346152.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367471), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_346204.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367543), mRNA
          Length = 675

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 479 ctcctccagcagaggtgaagtcaga 503
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>ref|XM_578880.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC367539), mRNA
          Length = 627

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 518 ctcctccagcagaggtgaagtcaga 542
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>ref|XM_578877.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2
           (SPIN-2) (LOC367536), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_229303.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301824), mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_346151.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2
           (SPIN-2) (LOC367470), mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 416 ctcctccagcagaggtgaagtcaga 440
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>ref|XM_578863.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC367462), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_229422.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
            transcript on the Y 2 (LOC301926), mRNA
          Length = 1836

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 68   ctcctccagcggaggtgaagtcaga 92
            |||||||||| ||||||||||||||
Sbjct: 1640 ctcctccagcagaggtgaagtcaga 1664



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 689 ctcctccagcagaggtgaagtcaga 713
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>ref|XM_578854.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC503320), mRNA
          Length = 459

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 263 ctcctccagcagaggtgaagtcaga 287
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>ref|XM_229476.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301966), mRNA
          Length = 735

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 539 ctcctccagcagaggtgaagtcaga 563
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>ref|XM_346138.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367436), mRNA
          Length = 462

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 266 ctcctccagcagaggtgaagtcaga 290
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>ref|XM_578829.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC367387), mRNA
          Length = 708

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 512 ctcctccagcagaggtgaagtcaga 536
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>ref|XM_578822.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC503287), mRNA
          Length = 732

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 536 ctcctccagcagaggtgaagtcaga 560
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>ref|XM_229360.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC301878), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_229255.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC301786), mRNA
          Length = 1836

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 593 ctcctccagcagaggtgaagtcaga 617
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>ref|XM_229717.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC302140), mRNA
          Length = 1122

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 926 ctcctccagcagaggtgaagtcaga 950
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>ref|XM_346104.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367357), mRNA
          Length = 813

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 677 ctcctccagcagaggtgaagtcaga 701
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>ref|XM_578816.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC367356), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>ref|XM_229433.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301935), mRNA
          Length = 492

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 296 ctcctccagcagaggtgaagtcaga 320
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>ref|XM_578813.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367352), mRNA
          Length = 744

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 548 ctcctccagcagaggtgaagtcaga 572
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>gb|AY186604.1| Helianthus annuus TIR-NBS-LRR resistance gene candidate protein
           RGC1.2 gene, partial cds
          Length = 431

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 459 ggtcattattatcatttgtaa 479
           |||||||||||||||||||||
Sbjct: 201 ggtcattattatcatttgtaa 181
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>ref|XM_577508.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
            protein (LOC502074), mRNA
          Length = 1641

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 68   ctcctccagcggaggtgaagtcaga 92
            |||||||||| ||||||||||||||
Sbjct: 1445 ctcctccagcagaggtgaagtcaga 1469
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>ref|XM_577506.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC364549), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
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>ref|XM_222167.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific
           transcript on the Y 2 (LOC288646), mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  ctcctccagcggaggtgaagtcaga 92
           |||||||||| ||||||||||||||
Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
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>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence
          Length = 147216

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     gagaagaaagaagaggcagat 45
              |||||||||||||||||||||
Sbjct: 127498 gagaagaaagaagaggcagat 127518
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>ref|NM_152506.1| Homo sapiens chromosome 21 open reading frame 129 (C21orf129), mRNA
          Length = 2033

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  gcagggcggcaggctggctt 448
            ||||||||||||||||||||
Sbjct: 1279 gcagggcggcaggctggctt 1298
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>ref|XM_813279.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506859.240) partial mRNA
          Length = 1575

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   ccagcggcagaggcaacaaa 116
            ||||||||||||||||||||
Sbjct: 1478 ccagcggcagaggcaacaaa 1459
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>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence
          Length = 178784

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gagaagaaagaagaggcaga 44
              ||||||||||||||||||||
Sbjct: 175297 gagaagaaagaagaggcaga 175316
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>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains
             the 5' end of the KHDRBS2 gene for KH domain containing
             RNA binding signal transduction associated protein 2,
             complete sequence
          Length = 116685

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    agaagaaagaagaggcagat 45
             ||||||||||||||||||||
Sbjct: 23177 agaagaaagaagaggcagat 23158
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>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part
             of the PDE4B gene for phosphodiesterase 4B, cAMP-specific
             (phosphodiesterase E4 dunce homolog, Drosophila), complete
             sequence
          Length = 152113

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   gtcattattatcatttgtaa 479
             ||||||||||||||||||||
Sbjct: 38275 gtcattattatcatttgtaa 38256
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>emb|AL731861.9| Zebrafish DNA sequence from clone BUSM1-46I22 in linkage group 19,
             complete sequence
          Length = 87662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   attattatcatttgtaactt 482
             ||||||||||||||||||||
Sbjct: 64143 attattatcatttgtaactt 64162
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>gb|AC034239.5| Homo sapiens chromosome 5 clone CTD-2325A5, complete sequence
          Length = 93381

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aggagaagaaagaagaggca 42
             ||||||||||||||||||||
Sbjct: 45833 aggagaagaaagaagaggca 45814
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>dbj|AK057397.1| Homo sapiens cDNA FLJ32835 fis, clone TESTI2003255
          Length = 2033

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  gcagggcggcaggctggctt 448
            ||||||||||||||||||||
Sbjct: 1279 gcagggcggcaggctggctt 1298
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>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete
             sequence
          Length = 178619

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agaagaaagaagaggcagat 45
             ||||||||||||||||||||
Sbjct: 58745 agaagaaagaagaggcagat 58764
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>gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, complete sequence
          Length = 195880

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 19     cagnaggagaagaaagaagaggc 41
              ||| |||||||||||||||||||
Sbjct: 133707 cagaaggagaagaaagaagaggc 133729
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>ref|XM_229238.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC301772), mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  tcctccagcggaggtgaagtcaga 92
           ||||||||| ||||||||||||||
Sbjct: 522 tcctccagcagaggtgaagtcaga 545
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>ref|XM_222132.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC288640), mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  tcctccagcggaggtgaagtcaga 92
           ||||||||| ||||||||||||||
Sbjct: 456 tcctccagcagaggtgaagtcaga 479
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>ref|XM_578815.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific
           protein (LOC367355), mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  tcctccagcggaggtgaagtcaga 92
           ||||||||| ||||||||||||||
Sbjct: 522 tcctccagcagaggtgaagtcaga 545
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>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete
              sequences
          Length = 201997

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gcagggcggcaggctggctt 448
              ||||||||||||||||||||
Sbjct: 125332 gcagggcggcaggctggctt 125313
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>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence
          Length = 42393

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    ggaggtgaagtcagatgctc 97
             ||||||||||||||||||||
Sbjct: 35012 ggaggtgaagtcagatgctc 34993
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>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence
          Length = 121251

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    attattatcatttgtaactt 482
              ||||||||||||||||||||
Sbjct: 118488 attattatcatttgtaactt 118469
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>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gcagggcggcaggctggctt 448
              ||||||||||||||||||||
Sbjct: 125914 gcagggcggcaggctggctt 125895
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>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence
          Length = 99670

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gagaagaaagaagaggcaga 44
             ||||||||||||||||||||
Sbjct: 97273 gagaagaaagaagaggcaga 97254
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    cgaggtgctgcagggcggca 439
              ||||||||||||||||||||
Sbjct: 922667 cgaggtgctgcagggcggca 922648
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>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b,
            complete sequence
          Length = 45450

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  aattgtaggcttctcttctc 393
            ||||||||||||||||||||
Sbjct: 6312 aattgtaggcttctcttctc 6331
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>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103,
             complete sequence
          Length = 100595

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   aattgtaggcttctcttctc 393
             ||||||||||||||||||||
Sbjct: 51017 aattgtaggcttctcttctc 51036
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>emb|AL732405.8| Mouse DNA sequence from clone RP23-149P4 on chromosome X, complete
              sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     atcttcagnaggagaagaaagaa 36
              |||||||| ||||||||||||||
Sbjct: 114541 atcttcagtaggagaagaaagaa 114563
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>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171
             region, complete sequence
          Length = 124516

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   gcagggcggcaggctggctt 448
             ||||||||||||||||||||
Sbjct: 65986 gcagggcggcaggctggctt 65967


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,709,270
Number of Sequences: 3902068
Number of extensions: 4709270
Number of successful extensions: 116522
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116397
Number of HSP's gapped (non-prelim): 125
length of query: 552
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 529
effective length of database: 17,143,297,704
effective search space: 9068804485416
effective search space used: 9068804485416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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