ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13g11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138J17, full insert sequence Length = 2016 Score = 605 bits (305), Expect = e-170 Identities = 487/545 (89%), Gaps = 2/545 (0%) Strand = Plus / Plus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 973 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 1032 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtgcctcc 154 ||||| |||||| | |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1033 tgagcagtttgtggatgcagtaaagcaaactgttttagcaaacaagagatgggtgcctcc 1092 Query: 155 tacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagctgttcttgg 214 ||| ||||||||||||||||||||||| || |||||| |||| ||||| ||||||||||| Sbjct: 1093 taccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgctgttcttgg 1152 Query: 215 tctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgggaactactt 274 ||| ||||||||||||||||| || |||||||| |||| ||| ||||| ||||||||||| Sbjct: 1153 tcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggggaactactt 1212 Query: 275 taaggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccc 334 ||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 1213 taaggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccc 1272 Query: 335 tggtggaactggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaa 394 ||||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 1273 tggtggaactggaagtgtgaagaccataggaaattatgcctcggtcttgatggcacagaa 1332 Query: 395 gattgcaaaggagaaaggttattctgatgttctctacttggatgctgttgagaaaaagta 454 ||||||||| || || || |||||||||||||||||||||||||||||| | |||||||| Sbjct: 1333 gattgcaaaagaaaagggctattctgatgttctctacttggatgctgttcacaaaaagta 1392 Query: 455 ccttgaagaagtatcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactcc 514 ||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1393 tcttgaagaagtttcttcatgtaatatttttgttgtcaagggcaatgtcatttcaactcc 1452 Query: 515 agcaataaaaggaacaatactaccgggcatcacaagggaaaagtataatttgatgttgct 574 |||| |||||||||||||| | || |||||||||| |||||||||| | ||||||||||| Sbjct: 1453 agcagtaaaaggaacaatattgccaggcatcacaa-ggaaaagtatca-ttgatgttgct 1510 Query: 575 ctgag 579 ||||| Sbjct: 1511 ctgag 1515
>ref|NM_197648.1| Oryza sativa (japonica cultivar-group) putative aminotransferase (OSJNBa0082M15.2), mRNA Length = 1449 Score = 579 bits (292), Expect = e-162 Identities = 456/508 (89%), Gaps = 2/508 (0%) Strand = Plus / Plus Query: 72 atgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaaacaaaccgtttta 131 |||||||||||||| ||| ||| ||||| |||||| | |||||||| || || |||||| Sbjct: 394 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcagactgtttta 453 Query: 132 gcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatattaggccactactc 191 |||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 454 gcaaacaagagatgggtgcctcctaccggtaaaggttctttatatattagaccgctactt 513 Query: 192 gtgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattattttt 251 |||| ||||| |||||||||||||| ||||||||||||||||| || |||||||| ||| Sbjct: 514 atgggtagtggtgctgttcttggtcttgcacctgctcctgagtatacgttcattatattt 573 Query: 252 gcctcccctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaa 311 | ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 574 gtctcccctgtggggaactactttaaggaaggtttagctccaataaatttgatagttgaa 633 Query: 312 gacaagtttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattat 371 || ||||||||||| || |||||||||||||||||| |||| |||||||| || |||||| Sbjct: 634 gataagtttcatcgtgcaacccctggtggaactggaagtgtgaagaccataggaaattat 693 Query: 372 gcctcggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctac 431 |||||||||||||||||||| ||||||||||| || || || |||||||||||||||||| Sbjct: 694 gcctcggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctac 753 Query: 432 ttggatgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtg 491 |||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 754 ttggatgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtc 813 Query: 492 aagggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagg 551 ||||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| | Sbjct: 814 aagggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-g 872 Query: 552 gaaaagtataatttgatgttgctctgag 579 ||||||||| | |||||||||||||||| Sbjct: 873 gaaaagtatca-ttgatgttgctctgag 899
>gb|AY106370.1| Zea mays PCO098993 mRNA sequence Length = 1720 Score = 537 bits (271), Expect = e-149 Identities = 462/523 (88%), Gaps = 2/523 (0%) Strand = Plus / Plus Query: 60 ggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaaa 119 ||||||||||||||||||||||||||||| |||||||||| ||| | | ||||||||| Sbjct: 654 ggtgctgagaggatgtgcatgcctgcaccctctgtcgagcagtttattgatgcagtaaaa 713 Query: 120 caaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatatt 179 ||||||||| | ||||| ||||||||| | |||||||| |||||||||||| |||||||| Sbjct: 714 caaaccgttcttgcaaataagagatggattcctcctactggtaaaggttctctgtatatt 773 Query: 180 aggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacaca 239 ||||| |||| |||||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 774 aggcccttacttatgggaagtggggctgttcttggtcttgcacctgctcctgagtataca 833 Query: 240 ttcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaat 299 |||||||| |||| ||| |||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 834 ttcattatatttgtctctcctgttggaaactactttaaggaaggtttagcaccaataaat 893 Query: 300 ttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagacc 359 |||||||||||||||||||| ||||| || || |||||||| ||||| ||||| |||||| Sbjct: 894 ttgatagttgaagacaagttccatcgtgctactcctggtggtactgggggtgtgaagacc 953 Query: 360 attgggaattatgcctcggtcttgatggcacagaagattgcaaaggagaaaggttattct 419 || || |||||||| ||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 954 ataggaaattatgcttcggtgttgatggcacagaaaattgcaaaggaaaagggttattct 1013 Query: 420 gatgttctctacttggatgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaat 479 ||||| ||||||||||| |||||| | || ||||||||||||||||| ||||| || ||| Sbjct: 1014 gatgtcctctacttggacgctgttcacaagaagtaccttgaagaagtttcttcatgcaat 1073 Query: 480 atttttgttgtgaagggcaatgttatttcaactccagcaataaaaggaacaatactaccg 539 |||||||||| |||| |||||||||||| || ||||||||||||||||||||| |||| Sbjct: 1074 gtttttgttgtcaaggacaatgttatttctaccccagcaataaaaggaacaatattacct 1133 Query: 540 ggcatcacaagggaaaagtataatttgatgttgctctgagtaa 582 || ||||||| |||||||||||| |||| |||||| ||||||| Sbjct: 1134 ggtatcacaa-ggaaaagtataa-ttgacgttgctttgagtaa 1174
>ref|NM_187638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1218 Score = 321 bits (162), Expect = 1e-84 Identities = 418/502 (83%), Gaps = 1/502 (0%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||| ||||||||||| ||||||||||| || | || ||||||||| | |||||||| Sbjct: 453 tggtgcagagaggatgtgtatgcctgcaccaactcttgaacaatttgtggatgcagtaaa 512 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 ||||||||||| ||||| || ||||||||||| || || |||||||| || ||||||| Sbjct: 513 gcaaaccgttttggcaaataaaagatgggtgcccccaaccggtaaaggctccctgtatat 572 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||||| || || |||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 573 aaggccgctgcttatgggaagtggagctgtccttggtcttgcacctgctcctgagtatac 632 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 || || ||||||| |||||||||||||||||| || |||||||| |||||||| || || Sbjct: 633 ctttatgatttttgtctcccctgttgggaactatttcaaggaaggtttagcccctattaa 692 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 ||||| | ||||| || ||||| || || |||||||||||||||| || || || || Sbjct: 693 cttgattatagaagaaaactttcaccgtgctgcccctggtggaactggcggagtgaaaac 752 Query: 359 cattgggaattatgcctcggtcttgatggcacagaagattgcaaaggagaaaggttattc 418 |||||| || ||||||||||| || | ||||||| ||||||||| ||||||| ||||| Sbjct: 753 cattggaaactatgcctcggtattaaaagcacagaggattgcaaaacagaaaggatattc 812 Query: 419 tgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaa 478 ||||| ||||| | ||||| ||| | || || || || |||||||| |||||||| || Sbjct: 813 agatgtcctctatctagatgccgttcacaagaaatatctggaagaagtgtcttcgtgcaa 872 Query: 479 tatttttgttgtgaagggcaatgttatttcaactccagcaataaaaggaacaatactacc 538 ||| ||| ||||||| |||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 873 tatctttattgtgaaaggcaatgttatttctactccagcaataaaaggaaccatactgcc 932 Query: 539 gggcatcacaagggaaaagtat 560 || || |||| |||||||||| Sbjct: 933 tggtataacaa-ggaaaagtat 953
>dbj|AK108687.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C06, full insert sequence Length = 1472 Score = 321 bits (162), Expect = 1e-84 Identities = 418/502 (83%), Gaps = 1/502 (0%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||| ||||||||||| ||||||||||| || | || ||||||||| | |||||||| Sbjct: 512 tggtgcagagaggatgtgtatgcctgcaccaactcttgaacaatttgtggatgcagtaaa 571 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 ||||||||||| ||||| || ||||||||||| || || |||||||| || ||||||| Sbjct: 572 gcaaaccgttttggcaaataaaagatgggtgcccccaaccggtaaaggctccctgtatat 631 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||||| || || |||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 632 aaggccgctgcttatgggaagtggagctgtccttggtcttgcacctgctcctgagtatac 691 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 || || ||||||| |||||||||||||||||| || |||||||| |||||||| || || Sbjct: 692 ctttatgatttttgtctcccctgttgggaactatttcaaggaaggtttagcccctattaa 751 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 ||||| | ||||| || ||||| || || |||||||||||||||| || || || || Sbjct: 752 cttgattatagaagaaaactttcaccgtgctgcccctggtggaactggcggagtgaaaac 811 Query: 359 cattgggaattatgcctcggtcttgatggcacagaagattgcaaaggagaaaggttattc 418 |||||| || ||||||||||| || | ||||||| ||||||||| ||||||| ||||| Sbjct: 812 cattggaaactatgcctcggtattaaaagcacagaggattgcaaaacagaaaggatattc 871 Query: 419 tgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaa 478 ||||| ||||| | ||||| ||| | || || || || |||||||| |||||||| || Sbjct: 872 agatgtcctctatctagatgccgttcacaagaaatatctggaagaagtgtcttcgtgcaa 931 Query: 479 tatttttgttgtgaagggcaatgttatttcaactccagcaataaaaggaacaatactacc 538 ||| ||| ||||||| |||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 932 tatctttattgtgaaaggcaatgttatttctactccagcaataaaaggaaccatactgcc 991 Query: 539 gggcatcacaagggaaaagtat 560 || || |||| |||||||||| Sbjct: 992 tggtataacaa-ggaaaagtat 1012
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Plus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||||||||| ||||||||||||||||||||||| || |||||| |||| ||||| || Sbjct: 28338 ggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgc 28397 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 |||||||||||| ||||||||||||||||| || |||||||| |||| ||| ||||| || Sbjct: 28398 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggg 28457 Query: 266 gaactactttaagg 279 |||||||||||||| Sbjct: 28458 gaactactttaagg 28471 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 377 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 436 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 29253 ggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttgga 29312 Query: 437 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 495 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 29313 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 29371 Score = 133 bits (67), Expect = 7e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 28740 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 28799 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 28800 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 28842 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/87 (90%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| || Sbjct: 30202 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gg 30260 Query: 553 aaaagtataatttgatgttgctctgag 579 |||||||| | |||||||||||||||| Sbjct: 30261 aaaagtatca-ttgatgttgctctgag 30286 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 28132 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 28191 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtg 149 ||||| |||||| | |||||||| ||||| |||||||||||||||||||||||| Sbjct: 28192 tgagcagtttgtggatgcagtaaagcaaactgttttagcaaacaagagatgggtg 28246
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Plus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||||||||| ||||||||||||||||||||||| || |||||| |||| ||||| || Sbjct: 27561062 ggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgc 27561121 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 |||||||||||| ||||||||||||||||| || |||||||| |||| ||| ||||| || Sbjct: 27561122 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggg 27561181 Query: 266 gaactactttaagg 279 |||||||||||||| Sbjct: 27561182 gaactactttaagg 27561195 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 377 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 436 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 27561977 ggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttgga 27562036 Query: 437 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 495 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 27562037 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 27562095 Score = 133 bits (67), Expect = 7e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 27561464 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 27561523 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 27561524 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 27561566 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/87 (90%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| || Sbjct: 27562926 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gg 27562984 Query: 553 aaaagtataatttgatgttgctctgag 579 |||||||| | |||||||||||||||| Sbjct: 27562985 aaaagtatca-ttgatgttgctctgag 27563010 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 27560856 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 27560915 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtg 149 ||||| |||||| | |||||||| ||||| |||||||||||||||||||||||| Sbjct: 27560916 tgagcagtttgtggatgcagtaaagcaaactgttttagcaaacaagagatgggtg 27560970
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||||||||| |||||||||||||| |||||||| || ||||| |||| ||||| || Sbjct: 62110 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 62051 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 |||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| || Sbjct: 62050 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 61991 Query: 266 gaactactttaagg 279 |||||||||||||| Sbjct: 61990 gaactactttaagg 61977 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 377 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 436 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 61199 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 61140 Query: 437 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 495 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 61139 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 61081 Score = 133 bits (67), Expect = 7e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 61707 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 61648 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 61647 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 61605 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/87 (90%), Gaps = 2/87 (2%) Strand = Plus / Minus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| || Sbjct: 59982 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gg 59924 Query: 553 aaaagtataatttgatgttgctctgag 579 |||||||| | |||||||||||||||| Sbjct: 59923 aaaagtatca-ttgatgttgctctgag 59898 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 62316 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 62257 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtg 149 ||||| |||||| | |||||||| || || |||||||||||||||||||||||| Sbjct: 62256 tgagcagtttgtggatgcagtaaagcagactgttttagcaaacaagagatgggtg 62202
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||||||||| |||||||||||||| |||||||| || ||||| |||| ||||| || Sbjct: 21002281 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 21002340 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 |||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| || Sbjct: 21002341 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 21002400 Query: 266 gaactactttaagg 279 |||||||||||||| Sbjct: 21002401 gaactactttaagg 21002414 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 377 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 436 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 21003192 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 21003251 Query: 437 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 495 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 21003252 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 21003310 Score = 133 bits (67), Expect = 7e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 21002684 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21002743 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 21002744 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21002786 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/87 (90%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| || Sbjct: 21004409 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gg 21004467 Query: 553 aaaagtataatttgatgttgctctgag 579 |||||||| | |||||||||||||||| Sbjct: 21004468 aaaagtatca-ttgatgttgctctgag 21004493 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 21002075 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 21002134 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtg 149 ||||| |||||| | |||||||| || || |||||||||||||||||||||||| Sbjct: 21002135 tgagcagtttgtggatgcagtaaagcagactgttttagcaaacaagagatgggtg 21002189
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||||||||| |||||||||||||| |||||||| || ||||| |||| ||||| || Sbjct: 21013545 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 21013604 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 |||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| || Sbjct: 21013605 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 21013664 Query: 266 gaactactttaagg 279 |||||||||||||| Sbjct: 21013665 gaactactttaagg 21013678 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 377 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 436 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 21014456 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 21014515 Query: 437 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 495 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 21014516 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 21014574 Score = 133 bits (67), Expect = 7e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 21013948 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21014007 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 21014008 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21014050 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/87 (90%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| || Sbjct: 21015673 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gg 21015731 Query: 553 aaaagtataatttgatgttgctctgag 579 |||||||| | |||||||||||||||| Sbjct: 21015732 aaaagtatca-ttgatgttgctctgag 21015757 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 35 ggaaaatgcaatgcggatgcaaactggtgctgagaggatgtgcatgcctgcacctcctgt 94 |||||||||| || | ||| ||| ||||| || || |||||||||||||| ||| ||| Sbjct: 21013339 ggaaaatgcactgagaatgagaacaggtgcagaaagaatgtgcatgcctgcgcctagtgt 21013398 Query: 95 cgagcaatttgtgaacgcagtaaaacaaaccgttttagcaaacaagagatgggtg 149 ||||| |||||| | |||||||| || || |||||||||||||||||||||||| Sbjct: 21013399 tgagcagtttgtggatgcagtaaagcagactgttttagcaaacaagagatgggtg 21013453
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||| || || |||||||| || ||||||| ||||| || || ||||||||||||| Sbjct: 356550 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 356491 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 ||| |||||||| ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 356490 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 356431 Query: 266 gaacta 271 |||||| Sbjct: 356430 gaacta 356425 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||| ||||||||||| ||||||||||| || | || ||||||||| | |||||||| Sbjct: 356740 tggtgcagagaggatgtgtatgcctgcaccaactcttgaacaatttgtggatgcagtaaa 356681 Query: 119 acaaaccgttttagcaaacaagagatgggt 148 ||||||||||| ||||| || |||||||| Sbjct: 356680 gcaaaccgttttggcaaataaaagatgggt 356651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||||||||| |||||||||||||||||||| ||||| || || || |||| || Sbjct: 355133 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-gg 355075 Query: 553 aaaagtat 560 |||||||| Sbjct: 355074 aaaagtat 355067 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 356173 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356114 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 356113 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356071
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||| || || |||||||| || ||||||| ||||| || || ||||||||||||| Sbjct: 84078 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 84019 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 ||| |||||||| ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 84018 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 83959 Query: 266 gaacta 271 |||||| Sbjct: 83958 gaacta 83953 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||| ||||||||||| ||||||||||| || | || ||||||||| | |||||||| Sbjct: 84268 tggtgcagagaggatgtgtatgcctgcaccaactcttgaacaatttgtggatgcagtaaa 84209 Query: 119 acaaaccgttttagcaaacaagagatgggt 148 ||||||||||| ||||| || |||||||| Sbjct: 84208 gcaaaccgttttggcaaataaaagatgggt 84179 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||||||||| |||||||||||||||||||| ||||| || || || |||| || Sbjct: 82661 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-gg 82603 Query: 553 aaaagtat 560 |||||||| Sbjct: 82602 aaaagtat 82595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 83701 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 83642 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 83641 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 83599
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 146 ggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtgggaagtggagc 205 |||||| || || |||||||| || ||||||| ||||| || || ||||||||||||| Sbjct: 356548 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 356489 Query: 206 tgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccctgttgg 265 ||| |||||||| ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 356488 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 356429 Query: 266 gaacta 271 |||||| Sbjct: 356428 gaacta 356423 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||| ||||||||||| ||||||||||| || | || ||||||||| | |||||||| Sbjct: 356738 tggtgcagagaggatgtgtatgcctgcaccaactcttgaacaatttgtggatgcagtaaa 356679 Query: 119 acaaaccgttttagcaaacaagagatgggt 148 ||||||||||| ||||| || |||||||| Sbjct: 356678 gcaaaccgttttggcaaataaaagatgggt 356649 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 493 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggg 552 |||||||||||||||| |||||||||||||||||||| ||||| || || || |||| || Sbjct: 355131 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-gg 355073 Query: 553 aaaagtat 560 |||||||| Sbjct: 355072 aaaagtat 355065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 277 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 336 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 356171 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356112 Query: 337 gtggaactggaggtgttaagaccattgggaattatgcctcggt 379 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 356111 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356069
>dbj|AK071103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077F14, full insert sequence Length = 883 Score = 91.7 bits (46), Expect = 2e-15 Identities = 78/86 (90%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 494 gggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggga 553 ||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| ||| Sbjct: 311 gggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-gga 369 Query: 554 aaagtataatttgatgttgctctgag 579 ||||||| | |||||||||||||||| Sbjct: 370 aaagtatca-ttgatgttgctctgag 394
>ref|NM_125975.2| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT5G65780 mRNA, complete cds Length = 2275 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 1478 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 1537 Query: 253 cctcccctgttgggaactactttaaggaagg 283 || ||||| ||||||||||| |||||||| Sbjct: 1538 tttcacctgtcgggaactacttcaaggaagg 1568 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 401 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 1627 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 1686 Query: 402 aaggagaaaggttattctgatgtt 425 || | ||||| |||||||||||| Sbjct: 1687 aaagctaaagggtattctgatgtt 1710
>emb|AJ293804.1|ATH293804 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 5 (bcat5 gene) Length = 1973 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 1190 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 1249 Query: 253 cctcccctgttgggaactactttaaggaagg 283 || ||||| ||||||||||| |||||||| Sbjct: 1250 tttcacctgtcgggaactacttcaaggaagg 1280 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 401 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 1339 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 1398 Query: 402 aaggagaaaggttattctgatgtt 425 || | ||||| |||||||||||| Sbjct: 1399 aaagctaaagggtattctgatgtt 1422
>emb|BX831860.1|CNS09ZQO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 638 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 697 Query: 253 cctcccctgttgggaactactttaaggaagg 283 || ||||| ||||||||||| |||||||| Sbjct: 698 tttcacctgtcgggaactacttcaaggaagg 728 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 401 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 402 aaggagaaaggttattctgatgtt 425 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870
>emb|BX831246.1|CNS09ZFV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1398 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 638 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 697 Query: 253 cctcccctgttgggaactactttaaggaagg 283 || ||||| ||||||||||| |||||||| Sbjct: 698 tttcacctgtcgggaactacttcaaggaagg 728 Score = 40.1 bits (20), Expect = 7.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 401 ||||||||||| || ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgtcaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 402 aaggagaaaggttattctgatgtt 425 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870
>emb|BX831049.1|CNS09ZFT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 638 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 697 Query: 253 cctcccctgttgggaactactttaaggaagg 283 || ||||| ||||||||||| |||||||| Sbjct: 698 tttcacctgtcgggaactacttcaaggaagg 728 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 401 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 402 aaggagaaaggttattctgatgtt 425 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870
>gb|AF193846.1|AF193846 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT2) mRNA, complete cds Length = 1700 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||| ||||||||||| |||||||| || ||||||||||||||||||||| | |||| || Sbjct: 845 tggggagtggagctgtccttggtcttgctcctgctcctgagtacacattcctgatttatg 904 Query: 253 cctcccctgttgggaactactttaaggaaggattagccccaataaatttg 302 || |||||||| || || ||||||||||| || || ||||| |||||| Sbjct: 905 tgtcacctgttggaaattattttaaggaaggtttggcaccaattaatttg 954
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 159 ggtaaaggttctttgtatattaggccactactcgtgggaagtggagctgttcttggtctc 218 |||||||| || ||||||||||| ||| | || ||||||||||| |||| |||||||| Sbjct: 15197 ggtaaaggctccttgtatattagaccattgctaatgggaagtggacctgtacttggtctt 15138 Query: 219 gcacctgctcctgagtacacattcattatttttgcctcccctgttgggaactactttaag 278 ||||||||||| |||||||| || | || | || || ||||||||||||||||||||| Sbjct: 15137 gcacctgctccggagtacacctttctaatatatgtttcacctgttgggaactactttaag 15078 Query: 279 g 279 | Sbjct: 15077 g 15077 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 321 catcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 373 |||||||| || |||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 14559 catcgggcaactcctggtggcactggaggtgtgaagaccattggcaactatgc 14507 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 60 ggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtg 107 ||||| ||| |||||||||||||| ||||| | || ||||| |||||| Sbjct: 15382 ggtgcggagcggatgtgcatgccttcacctaccgtggagcagtttgtg 15335 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 468 tcttcgtgtaatatttttgttgtgaagg 495 ||||| ||||||||||||||||| |||| Sbjct: 14007 tcttcctgtaatatttttgttgttaagg 13980
>gb|AF193845.1|AF193845 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT1) mRNA, complete cds Length = 1683 Score = 79.8 bits (40), Expect = 9e-12 Identities = 237/300 (79%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 75 tgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaaacaaaccgttttagca 134 ||||||||| |||| |||| || || |||||| | ||||||||| || ||||||||| Sbjct: 626 tgcatgccttcaccatctgttgaacagtttgtggaagcagtaaaagccactgttttagca 685 Query: 135 aacaagagatgggtgcctcctacgggtaaaggttctttgtatattaggccactactcgtg 194 || | |||||| | ||||| | ||||||||||| || || || || ||||| || || Sbjct: 686 aatgaaagatggattcctccaccaggtaaaggttcattatacataagaccactgcttatg 745 Query: 195 ggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttgcc 254 || ||||||||| |||||||| | || || |||||||||||||||||| | |||| || Sbjct: 746 gggagtggagctattcttggtgttgctccagctcctgagtacacattcctgatttatgta 805 Query: 255 tcccctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagac 314 || ||||| || || || ||||||||||| | || |||||||||||| || ||| |||| Sbjct: 806 tcacctgtgggaaattattttaaggaaggtatggcaccaataaatttggtaattg-agac 864 Query: 315 a-agtttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 373 | | | ||||| || || |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 865 agaaatgcatcgcgcaactcctggtggtactggaggtgtcaagactatcggaaattatgc 924
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 49968 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 49909 Query: 253 cctcccctgttgggaactactttaagg 279 || ||||| ||||||||||| |||| Sbjct: 49908 tttcacctgtcgggaactacttcaagg 49882 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 actggaggtgttaagaccattgggaattatgc 373 |||||||||||||| ||||| || |||||||| Sbjct: 49736 actggaggtgttaaaaccatcggtaattatgc 49705
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 193 tgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttg 252 |||||| |||||||||||||||||| || ||||||||||| ||||| ||| |||| |||| Sbjct: 69840 tgggaactggagctgttcttggtcttgctcctgctcctgaatacactttccttatctttg 69899 Query: 253 cctcccctgttgggaactactttaagg 279 || ||||| ||||||||||| |||| Sbjct: 69900 tttcacctgtcgggaactacttcaagg 69926 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 actggaggtgttaagaccattgggaattatgc 373 |||||||||||||| ||||| || |||||||| Sbjct: 70072 actggaggtgttaaaaccatcggtaattatgc 70103
>emb|CT573020.1| Medicago truncatula chromosome 5 clone mth2-83i12, COMPLETE SEQUENCE Length = 92109 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 158 gggtaaaggttctttgtatattaggccactactcgtgggaagtggagctgttcttggtct 217 |||||||||||| ||||||||||| || | || |||||||||||||||| ||||| || Sbjct: 76222 gggtaaaggttcattgtatattagacctttgctaatgggaagtggagctgtacttgggct 76281 Query: 218 cgcacctgctcctgagtacacattcattatttttgcctcccctgttgggaactactttaa 277 ||||||||||| |||||||| || | || | || || ||||||||||||||||| || Sbjct: 76282 tgcacctgctccagagtacacctttctaatatatgtttcacctgttgggaactacttcaa 76341 Query: 278 gg 279 || Sbjct: 76342 gg 76343 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 336 ggtggaactggaggtgttaagaccattgggaattatgc 373 ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 77983 ggtggcactggaggtgtgaagaccattggaaactatgc 78020
>ref|NM_114828.3| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT3G49680 mRNA, complete cds Length = 1567 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 589 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 648 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 649 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 708 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 709 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 768 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 769 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 828 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 829 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 888 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 889 cataggcaattatgc 903
>emb|AJ276124.1|ATH276124 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 3 (bcat3 gene) Length = 1539 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 573 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 632 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 633 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 692 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 693 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 752 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 753 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 812 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 813 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 872 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 873 cataggcaattatgc 887
>gb|AY097417.1| Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 480 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 539 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 540 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 599 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 600 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 659 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 660 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 719 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 720 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 779 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 780 cataggcaattatgc 794
>gb|AF446355.1|AF446355 Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1511 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 571 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 630 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 631 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 690 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 691 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 750 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 751 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 810 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 811 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 870 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 871 cataggcaattatgc 885
>emb|BX822562.1|CNS0A630 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1368 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 470 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 529 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 530 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 589 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 590 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 649 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 650 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 709 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 710 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 769 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 770 cataggcaattatgc 784
>gb|AY087619.1| Arabidopsis thaliana clone 37100 mRNA, complete sequence Length = 1544 Score = 69.9 bits (35), Expect = 9e-09 Identities = 245/315 (77%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgcacctcctgtcgagcaatttgtgaacgcagtaaa 118 |||||||||||||||||| |||||||| || | || ||||| ||||| | || || | Sbjct: 578 tggtgctgagaggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgac 637 Query: 119 acaaaccgttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatat 178 | |||| || |||||||||| | ||||| || || | ||||||||||| || ||| | Sbjct: 638 agaaactgtactagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgt 697 Query: 179 taggccactactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacac 238 ||| ||| | || |||||| ||||||||||||||||| || ||||| || || || || Sbjct: 698 tagaccattgctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatac 757 Query: 239 attcattatttttgcctcccctgttgggaactactttaaggaaggattagccccaataaa 298 |||||||| | || || ||||||||||||||||| |||||||| | || || || || Sbjct: 758 tttcattatctatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaa 817 Query: 299 tttgatagttgaagacaagtttcatcgggccacccctggtggaactggaggtgttaagac 358 |||||| || || | | ||||| || || || |||||||| || ||||||||||| || Sbjct: 818 tttgattgtggagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaac 877 Query: 359 cattgggaattatgc 373 ||| || |||||||| Sbjct: 878 cataggcaattatgc 892
>emb|BX824847.1|CNS0A7CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 201 ggagctgttcttggtctcgcacctgctcctgagtacacattcattatttttgcctcccct 260 ||||||||||||||||| || ||||| || || || || |||||||| | || || ||| Sbjct: 702 ggagctgttcttggtcttgcgcctgcaccagaatatactttcattatctatgtttcgcct 761 Query: 261 gttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaagttt 320 |||||||||||||| |||||||| | || || || |||||||| || || | | ||| Sbjct: 762 gttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaattt 821 Query: 321 catcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 373 || || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 822 caccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 874 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgc 85 |||||||||||||||||| |||||||| Sbjct: 561 tggtgctgagaggatgtgtatgcctgc 587
>gb|BT009368.1| Triticum aestivum clone wlm96.pk027.n2:fis, full insert mRNA sequence Length = 1514 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 333 cctggtggaactggaggtgttaagaccattgggaattatgcctcggtcttgatggcacag 392 |||||||||||||| | | ||||||| ||||| |||||||| ||||| | | || ||| Sbjct: 707 cctggtggaactggtgatattaagacaattggaaattatgcttcggttgttagtgctcag 766 Query: 393 aagattgcaaaggagaaaggttattctgatgttctctacttggat 437 | | || |||||||||||| ||||||||||||| ||||||||| Sbjct: 767 agaagagccaaggagaaaggtcattctgatgttctttacttggat 811 Score = 44.1 bits (22), Expect = 0.51 Identities = 88/110 (80%) Strand = Plus / Plus Query: 132 gcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatattaggccactactc 191 ||||||||| | ||||| || || || || ||||||||||| ||||| ||||| || || Sbjct: 506 gcaaacaagcgttgggtaccccccactggcaaaggttctttatatatcaggccgctgctg 565 Query: 192 gtgggaagtggagctgttcttggtctcgcacctgctcctgagtacacatt 241 | |||||||||||| | || ||| | |||||||| || ||||| ||||| Sbjct: 566 attggaagtggagctatgctaggtgtagcacctgccccggagtatacatt 615
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 159 ggtaaaggttctttgtatattaggccactactcgtgggaagtggagctgttcttggtctc 218 ||||||||||| || ||| |||| ||| | || |||||| ||||||||||||||||| Sbjct: 99912 ggtaaaggttccttatatgttagaccattgctaatgggaacaggagctgttcttggtctt 99971 Query: 219 gcacctgctcctgagtacacattcattatttttgcctcccctgttgggaactactttaag 278 || ||||| || || || || |||||||| | || || ||||||||||||||||| ||| Sbjct: 99972 gcgcctgcaccagaatatactttcattatctatgtttcgcctgttgggaactacttcaag 100031 Query: 279 g 279 | Sbjct: 100032 g 100032 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgc 85 |||||||||||||||||| |||||||| Sbjct: 99707 tggtgctgagaggatgtgtatgcctgc 99733 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 cctggtggaactggaggtgttaagaccattgggaattatgc 373 |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 100177 cctggtggtaccggaggtgttaaaaccataggcaattatgc 100217
>emb|AL132965.1|ATT16K5 Arabidopsis thaliana DNA chromosome 3, BAC clone T16K5 Length = 97711 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 159 ggtaaaggttctttgtatattaggccactactcgtgggaagtggagctgttcttggtctc 218 ||||||||||| || ||| |||| ||| | || |||||| ||||||||||||||||| Sbjct: 14012 ggtaaaggttccttatatgttagaccattgctaatgggaacaggagctgttcttggtctt 14071 Query: 219 gcacctgctcctgagtacacattcattatttttgcctcccctgttgggaactactttaag 278 || ||||| || || || || |||||||| | || || ||||||||||||||||| ||| Sbjct: 14072 gcgcctgcaccagaatatactttcattatctatgtttcgcctgttgggaactacttcaag 14131 Query: 279 g 279 | Sbjct: 14132 g 14132 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 tggtgctgagaggatgtgcatgcctgc 85 |||||||||||||||||| |||||||| Sbjct: 13807 tggtgctgagaggatgtgtatgcctgc 13833 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 cctggtggaactggaggtgttaagaccattgggaattatgc 373 |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 14277 cctggtggtaccggaggtgttaaaaccataggcaattatgc 14317
>dbj|AB026249.1| Lithospermum erythrorhizon mRNA for branched-chain amino acid aminotransferase, partial cds Length = 390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 457 ttgaagaagtatcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccag 516 |||| ||||| || || ||||| ||||||||||| ||||| |||||||| ||||| |||| Sbjct: 127 ttgaggaagtctcatcttgtaacatttttgttgtcaagggtaatgttatatcaacaccag 186 Query: 517 caa 519 ||| Sbjct: 187 caa 189
>ref|XM_473479.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 52.0 bits (26), Expect = 0.002 Identities = 122/154 (79%) Strand = Plus / Plus Query: 127 ttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatattaggccac 186 |||||||||||||| | ||||| || ||||| || ||||||||||| ||||| || || | Sbjct: 539 ttttagcaaacaagcgctgggtaccccctactggcaaaggttctttatatatcagaccgc 598 Query: 187 tactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcatta 246 | || | |||||||| ||| | || ||| | ||||| || || ||||||||||| || Sbjct: 599 tgctgattggaagtggggctatcctcggtgttgcaccagccccagagtacacatttgttg 658 Query: 247 tttttgcctcccctgttgggaactactttaagga 280 | ||||| | ||| |||||| |||| |||||||| Sbjct: 659 tctttgcttgcccagttgggcactattttaagga 692 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 402 aaggagaaaggttattctgatgttctctacttggat 437 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 814 aaggagagaggtcattctgatgttctttacttggat 849
>dbj|AK106376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D03, full insert sequence Length = 1674 Score = 52.0 bits (26), Expect = 0.002 Identities = 122/154 (79%) Strand = Plus / Plus Query: 127 ttttagcaaacaagagatgggtgcctcctacgggtaaaggttctttgtatattaggccac 186 |||||||||||||| | ||||| || ||||| || ||||||||||| ||||| || || | Sbjct: 735 ttttagcaaacaagcgctgggtaccccctactggcaaaggttctttatatatcagaccgc 794 Query: 187 tactcgtgggaagtggagctgttcttggtctcgcacctgctcctgagtacacattcatta 246 | || | |||||||| ||| | || ||| | ||||| || || ||||||||||| || Sbjct: 795 tgctgattggaagtggggctatcctcggtgttgcaccagccccagagtacacatttgttg 854 Query: 247 tttttgcctcccctgttgggaactactttaagga 280 | ||||| | ||| |||||| |||| |||||||| Sbjct: 855 tctttgcttgcccagttgggcactattttaagga 888 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 402 aaggagaaaggttattctgatgttctctacttggat 437 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 1010 aaggagagaggtcattctgatgttctttacttggat 1045
>ref|NM_103896.1| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT1G50090 mRNA, complete cds Length = 1104 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 143 atgggtgcctcctacgggtaaaggttctttgtatattaggccactactc 191 |||||| |||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 396 atgggtacctcctccggggaaaggagctttgtatattaggcctctactc 444
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 402 aaggagaaaggttattctgatgttctctacttggat 437 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 8964 aaggagagaggtcattctgatgttctttacttggat 8929
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 402 aaggagaaaggttattctgatgttctctacttggat 437 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 164592 aaggagagaggtcattctgatgttctttacttggat 164557
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 402 aaggagaaaggttattctgatgttctctacttggat 437 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 28001739 aaggagagaggtcattctgatgttctttacttggat 28001704
>gb|AC025483.7| Homo sapiens chromosome 15, clone RP11-398I10, complete sequence Length = 180096 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 gagaggatgtgcatgcctgcac 87 |||||||||||||||||||||| Sbjct: 14236 gagaggatgtgcatgcctgcac 14215
>gb|AC040930.6| Homo sapiens chromosome 15, clone CTD-2006N8, complete sequence Length = 113031 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gagaggatgtgcatgcctgcac 87 |||||||||||||||||||||| Sbjct: 16460 gagaggatgtgcatgcctgcac 16481
>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1, complete sequence Length = 91720 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 150 cctcctacgggtaaaggttctttgtatattaggccactactc 191 |||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 20105 cctcctccggggaaaggagctttgtatattaggcctctactc 20146
>gb|AC162035.5| Mus musculus chromosome 18, clone RP23-434N7, complete sequence Length = 200472 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 gattgcaaaggagaaaggttattct 419 |||||||||||||| |||||||||| Sbjct: 17484 gattgcaaaggagagaggttattct 17460
>gb|AC027006.8| Homo sapiens chromosome 8, clone RP11-185G5, complete sequence Length = 101138 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tccagcaataaaaggaacaat 532 ||||||||||||||||||||| Sbjct: 48559 tccagcaataaaaggaacaat 48539
>gb|AF003625.2| Homo sapiens chromosome X clone Qc-12F7, Qc-11H4 map q28, complete sequence Length = 70580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttatttttgcctcccctgttg 264 ||||||||||||||||||||| Sbjct: 39786 ttatttttgcctcccctgttg 39766
>gb|AC011444.5|AC011444 Homo sapiens chromosome 19 clone CTC-232P5, complete sequence Length = 133925 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 ctccagcaataaaaggaacaa 531 ||||||||||||||||||||| Sbjct: 38596 ctccagcaataaaaggaacaa 38576
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 455 ccttgaagaagtatcttcgtgtaat 479 |||||||||||| |||||||||||| Sbjct: 454854 ccttgaagaagtttcttcgtgtaat 454878
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 442 ttgagaaaaagtaccttgaagaagt 466 |||||||||||||| |||||||||| Sbjct: 2282715 ttgagaaaaagtacattgaagaagt 2282691
>ref|XM_364870.1| Magnaporthe grisea 70-15 hypothetical protein (MG09715.4) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 agaagattgcaaaggagaaaggtt 414 ||||||||||||||||||| |||| Sbjct: 776 agaagattgcaaaggagaagggtt 799
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ggaagtggagctgttcttgg 214 |||||||||||||||||||| Sbjct: 100568 ggaagtggagctgttcttgg 100549
>gb|AC144819.8| Mus musculus BAC clone RP23-162A11 from chromosome 14, complete sequence Length = 198432 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atttgatagttgaagacaag 317 |||||||||||||||||||| Sbjct: 142589 atttgatagttgaagacaag 142608
>emb|AL359833.12| Human DNA sequence from clone RP11-186C9 on chromosome 1, complete sequence Length = 122014 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aaggttctttgtatattagg 182 |||||||||||||||||||| Sbjct: 96521 aaggttctttgtatattagg 96540
>emb|AL359203.22| Human DNA sequence from clone RP11-547P4 on chromosome 1 Contains a pseudogene similar to part of tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta polypeptide (YWHAQ), complete sequence Length = 121362 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gtaaaggttctttgtatatt 179 |||||||||||||||||||| Sbjct: 59186 gtaaaggttctttgtatatt 59205
>emb|AL160270.19| Human DNA sequence from clone RP11-296L22 on chromosome 9 Contains the 5' end of the C9orf25 gene for chromosome 9 open reading frame 25 (FLJ39031), the DNAI1 gene for dynein axonemal intermediate polypeptide 1, the CNTFR gene for ciliary neurotrophic factor receptor, a novel pseudogene, three novel genes, the 3' end of the DCTN3 gene for dynactin (p22) and five CpG islands, complete sequence Length = 199114 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 aatatttttgttgtgaaggg 496 |||||||||||||||||||| Sbjct: 10584 aatatttttgttgtgaaggg 10603
>gb|AC114900.26| Ustilago hordei strain 4875-4 clone uhobac-2b7, complete sequence Length = 100829 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 gcatgcctgcacctcctgtcgagc 99 |||||||| ||||||||||||||| Sbjct: 35973 gcatgcctccacctcctgtcgagc 35950
>gb|AC157504.2| Medicago truncatula chromosome 2 BAC clone mte1-65n19, complete sequence Length = 106635 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 cgtgtaatatttttgttgtgaagg 495 |||| ||||||||||||||||||| Sbjct: 73174 cgtggaatatttttgttgtgaagg 73151
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 gcatgcctgcacctcctgtcgagc 99 |||||||| ||||||||||||||| Sbjct: 39609 gcatgcctccacctcctgtcgagc 39586
>emb|AL079352.3|CNS00M8V Human chromosome 14 DNA sequence BAC R-388G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176833 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 ggcacagaagattgcaaaggagaa 409 ||||||||||||||||||| |||| Sbjct: 72708 ggcacagaagattgcaaagcagaa 72731 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,334,286 Number of Sequences: 3902068 Number of extensions: 6334286 Number of successful extensions: 125818 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125408 Number of HSP's gapped (non-prelim): 396 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
