| Clone Name | basd13f18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY220738.1| Hordeum vulgare putative protease inhibitor (SD10) mRNA, complete cds Length = 509 Score = 141 bits (71), Expect = 9e-31 Identities = 97/106 (91%) Strand = Plus / Plus Query: 1 aacatgagcaaaccatgcgacggtcccaagacggagtggcctgagctggncgggcgcacg 60 ||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 70 aacatgagcaagtcatgcgacggtgccaagacggagtggcctgagctggtcgggtgcacg 129 Query: 61 atcgaggaggcgagagagaagatcaaggcggaccggccggacctca 106 ||| ||||||| | ||| |||||||||||||||||||||||||||| Sbjct: 130 atcaaggaggccaaagaaaagatcaaggcggaccggccggacctca 175
>emb|Y08625.1|HVSCI2 H.vulgare mRNA for subtilisin-chymotrypsin inhibitor 2 Length = 549 Score = 141 bits (71), Expect = 9e-31 Identities = 97/106 (91%) Strand = Plus / Plus Query: 1 aacatgagcaaaccatgcgacggtcccaagacggagtggcctgagctggncgggcgcacg 60 ||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 54 aacatgagcaagtcatgcgacggtgccaagacggagtggcctgagctggtcgggtgcacg 113 Query: 61 atcgaggaggcgagagagaagatcaaggcggaccggccggacctca 106 ||| ||||||| | ||| |||||||||||||||||||||||||||| Sbjct: 114 atcaaggaggccaaagaaaagatcaaggcggaccggccggacctca 159
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.4 Identities = 58/71 (81%) Strand = Plus / Minus Query: 25 cccaagacggagtggcctgagctggncgggcgcacgatcgaggaggcgagagagaagatc 84 ||||||||||||||||| ||||| | | || |||||| ||||||| | ||||||||| Sbjct: 24387282 cccaagacggagtggcccgagctagtttgccggacgatcaaggaggccaaggagaagatc 24387223 Query: 85 aaggcggaccg 95 || || ||||| Sbjct: 24387222 aaagcagaccg 24387212
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 2.4 Identities = 58/71 (81%) Strand = Plus / Minus Query: 25 cccaagacggagtggcctgagctggncgggcgcacgatcgaggaggcgagagagaagatc 84 ||||||||||||||||| ||||| | | || |||||| ||||||| | ||||||||| Sbjct: 133186 cccaagacggagtggcccgagctagtttgccggacgatcaaggaggccaaggagaagatc 133127 Query: 85 aaggcggaccg 95 || || ||||| Sbjct: 133126 aaagcagaccg 133116
>ref|XM_316648.2| Anopheles gambiae str. PEST ENSANGP00000011462 (ENSANGG00000008973), partial mRNA Length = 1680 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgatcgaggaggcgagagag 78 |||||||||||||||||||| Sbjct: 365 cgatcgaggaggcgagagag 384
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 gaggaggcgagagagaaga 82 ||||||||||||||||||| Sbjct: 310248 gaggaggcgagagagaaga 310230
>gb|AY341341.1| Cryptococcus neoformans var. neoformans strain B3501 Crg1 gene, complete cds Length = 3000 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 gaggaggcgagagagaaga 82 ||||||||||||||||||| Sbjct: 24 gaggaggcgagagagaaga 6
>gb|AY341340.1| Cryptococcus neoformans var. neoformans strain JEC21 Crg1 gene, complete cds Length = 4000 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 gaggaggcgagagagaaga 82 ||||||||||||||||||| Sbjct: 25 gaggaggcgagagagaaga 7
>gb|AC025426.11| Homo sapiens chromosome 10 clone RP11-242G20, complete sequence Length = 153645 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 cctcaccgtgaatcctgtc 120 ||||||||||||||||||| Sbjct: 49674 cctcaccgtgaatcctgtc 49656
>gb|AY878695.1| Oryza sativa (japonica cultivar-group) subitilisin-chymotrypsin inhibitor (Sci3) mRNA, complete cds Length = 466 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 cccaagacggagtggcctgagct 47 ||||||||||||||||| ||||| Sbjct: 107 cccaagacggagtggcccgagct 129
>gb|M19529.1|PIGFSA Pig follistatin (FS) gene, complete cds Length = 6247 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 gaggaggcgagagagaaga 82 ||||||||||||||||||| Sbjct: 2640 gaggaggcgagagagaaga 2622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 895,178 Number of Sequences: 3902068 Number of extensions: 895178 Number of successful extensions: 58623 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58559 Number of HSP's gapped (non-prelim): 62 length of query: 192 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 170 effective length of database: 17,147,199,772 effective search space: 2915023961240 effective search space used: 2915023961240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)