ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13f17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H14, full insert sequence Length = 796 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Plus Query: 174 ccatcgtcgcgcgtcggatctgcccctttctggagaagaagacgaaccgggccaacaagg 233 ||||| ||||||| ||||| |||||||| ||| |||||||| ||| |||| ||||||| Sbjct: 237 ccatcctcgcgcgccggatatgccccttcacggacaagaagaccaacagggcgaacaagg 296 Query: 234 tgtccttctccaaccacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagc 293 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 297 tgtccttctcaaaccacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagc 356 Query: 294 tgtggtgggaggccggaaagcgctacgtcaagctcaggctctccaccaaggccctcaaga 353 |||||||||||| || ||||||| ||||||||| | ||||||||||| |||||||||| Sbjct: 357 tgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaaga 416 Query: 354 caatcgagaagcacggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaaga 413 | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 417 ccatcgagaagcatggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaaga 476 Query: 414 aat 416 ||| Sbjct: 477 aat 479 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 84 cctcgctcgggttcgccacctcgcagctcgcgggcctcagcctcggcctc 133 |||| ||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 138 cctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctc 187
>ref|XM_493864.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 267 Score = 280 bits (141), Expect = 5e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 188 cggatctgcccctttctggagaagaagacgaaccgggccaacaaggtgtccttctccaac 247 ||||| |||||||| ||| |||||||| ||| |||| ||||||||||||||||| ||| Sbjct: 37 cggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaac 96 Query: 248 cacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggcc 307 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 97 cacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaa 156 Query: 308 ggaaagcgctacgtcaagctcaggctctccaccaaggccctcaagacaatcgagaagcac 367 || ||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||| Sbjct: 157 ggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcat 216 Query: 368 ggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaagaaat 416 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 217 ggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaat 265
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 280 bits (141), Expect = 5e-72 Identities = 207/229 (90%) Strand = Plus / Minus Query: 188 cggatctgcccctttctggagaagaagacgaaccgggccaacaaggtgtccttctccaac 247 ||||| |||||||| ||| |||||||| ||| |||| ||||||||||||||||| ||| Sbjct: 66578 cggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaac 66519 Query: 248 cacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggcc 307 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 66518 cacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaa 66459 Query: 308 ggaaagcgctacgtcaagctcaggctctccaccaaggccctcaagacaatcgagaagcac 367 || ||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||| Sbjct: 66458 ggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcat 66399 Query: 368 ggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaagaaat 416 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 66398 ggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaat 66350 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 84 cctcgctcgggttcgccacctcgcagctcgcgggcctcagcctcggcctc 133 |||| ||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 68306 cctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctc 68257
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 280 bits (141), Expect = 5e-72 Identities = 207/229 (90%) Strand = Plus / Minus Query: 188 cggatctgcccctttctggagaagaagacgaaccgggccaacaaggtgtccttctccaac 247 ||||| |||||||| ||| |||||||| ||| |||| ||||||||||||||||| ||| Sbjct: 66578 cggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaac 66519 Query: 248 cacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggcc 307 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 66518 cacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaa 66459 Query: 308 ggaaagcgctacgtcaagctcaggctctccaccaaggccctcaagacaatcgagaagcac 367 || ||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||| Sbjct: 66458 ggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcat 66399 Query: 368 ggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaagaaat 416 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 66398 ggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaat 66350 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 84 cctcgctcgggttcgccacctcgcagctcgcgggcctcagcctcggcctc 133 |||| ||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 68306 cctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctc 68257
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 280 bits (141), Expect = 5e-72 Identities = 207/229 (90%) Strand = Plus / Minus Query: 188 cggatctgcccctttctggagaagaagacgaaccgggccaacaaggtgtccttctccaac 247 ||||| |||||||| ||| |||||||| ||| |||| ||||||||||||||||| ||| Sbjct: 75965 cggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaac 75906 Query: 248 cacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggcc 307 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75905 cacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaa 75846 Query: 308 ggaaagcgctacgtcaagctcaggctctccaccaaggccctcaagacaatcgagaagcac 367 || ||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||| Sbjct: 75845 ggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcat 75786 Query: 368 ggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaagaaat 416 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 75785 ggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaat 75737 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 84 cctcgctcgggttcgccacctcgcagctcgcgggcctcagcctcggcctc 133 |||| ||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 77693 cctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctc 77644
>gb|AY104997.1| Zea mays PCO079200 mRNA sequence Length = 593 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 209 aagaagacgaaccgggccaacaaggtgtccttctccaaccacaagaccaagaagcagcaa 268 ||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 269 aagaagacgaaccgggcgaacaaggtgtcgttttccaaccacaagacgaagaagcagcag 328 Query: 269 tttgtgaacctgcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctc 328 || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 329 ttcgtgaacctgcagtacaagaagctgtggtgggaggccggcaagcgcttcgtcaagctg 388 Query: 329 aggctctccaccaaggccctcaagacaatcgagaagcacggcctcgacgccgtcgccaag 388 | || |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 389 cgcctttccaccaaggccctcaagaccatcgagaagcacggcctcgacgccgtcgcgcgc 448 Query: 389 aaggccggcatcgacctcaacaagaaatgag 419 |||||||||||||||||||||||||| |||| Sbjct: 449 aaggccggcatcgacctcaacaagaagtgag 479
>dbj|AK059567.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H10, full insert sequence Length = 487 Score = 232 bits (117), Expect = 1e-57 Identities = 156/169 (92%) Strand = Plus / Plus Query: 248 cacaagaccaagaagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggcc 307 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 cacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaa 60 Query: 308 ggaaagcgctacgtcaagctcaggctctccaccaaggccctcaagacaatcgagaagcac 367 || ||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||| Sbjct: 61 ggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcat 120 Query: 368 ggcctcgacgccgtcgccaagaaggccggcatcgacctcaacaagaaat 416 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 ggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaat 169
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 227 aacaaggtgtccttctccaaccacaagaccaagaagcagcaatttgtgaacctgcagtac 286 ||||| ||||| ||||| |||||||||||||||||| |||||| || ||| |||||||| Sbjct: 22694 aacaaagtgtcattctctaaccacaagaccaagaagttgcaattcgtcaacttgcagtac 22753 Query: 287 aa 288 || Sbjct: 22754 aa 22755
>emb|X68078.1|NTRPCL28 N.tabacum mRNA for chloroplast ribosomal protein CL28 Length = 671 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 208 gaagaagacgaaccgggccaacaaggtgtccttctccaaccacaagaccaagaagcagca 267 ||||||| | ||| |||| |||||||| || ||| ||||||||||| || ||| ||| Sbjct: 302 gaagaagtccaacagggcaaacaaggtctctcactcaaaccacaagacaaaaaagttgca 361 Query: 268 atttgtgaacctgcagtacaagaagctgtggtgggaggccggaaagcgctacgt 321 |||||| ||||| || ||||||| | ||||||||||| || ||||||||||| Sbjct: 362 atttgtaaaccttcaatacaagagaatttggtgggaggcaggcaagcgctacgt 415
>gb|AY212800.1| Uncultured bacterium clone XIVA3 Uvs061 (uvs061), Uvs062 (uvs062), Uvs063 (uvs063), Uvs064 (uvs064), Uvs065 (uvs065), Uvs066 (uvs066), Uvs067 (uvs067), Uvs068 (uvs068), Uvs069, ActP (actP), AguC (aguC), Uvs072 (uvs072), AguD (aguD), AguE (aguE), Uvs075 (uvs075), Uvs076 (uvs076), Uvs077 (uvs077), Uvs078 (uvs078), Uvs079 (uvs079), Uvs080 (uvs080), AguF (aguF), and Uvs082 (uvs082) genes, complete cds Length = 38120 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 375 acgccgtcgccaagaaggccggcatcga 402 ||||||| |||||||||||||||||||| Sbjct: 14460 acgccgtggccaagaaggccggcatcga 14433
>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete sequence Length = 195224 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 235 gtccttctccaaccacaagaccaa 258 |||||||||||||||||||||||| Sbjct: 191826 gtccttctccaaccacaagaccaa 191803
>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence Length = 172103 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 235 gtccttctccaaccacaagaccaa 258 |||||||||||||||||||||||| Sbjct: 66537 gtccttctccaaccacaagaccaa 66514
>gb|AY190738.1| Pagrus major 40S ribosomal protein S18 mRNA, partial cds Length = 477 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 gaaggccggcatcgacctcaacaaga 413 |||||||| ||||||||||||||||| Sbjct: 103 gaaggccgacatcgacctcaacaaga 128
>gb|BC074110.1| Xenopus laevis MGC81777 protein, mRNA (cDNA clone MGC:81777 IMAGE:6866454), complete cds Length = 1520 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 149 tccatccccaccaacaccaagaacaccatc 178 ||||||||||||||||| || ||||||||| Sbjct: 720 tccatccccaccaacacaaacaacaccatc 691
>gb|BC079336.1| Rattus norvegicus similar to hypothetical protein D4Ertd89e, mRNA (cDNA clone MGC:94772 IMAGE:7106021), complete cds Length = 2708 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 agttttccttttctcccctttttcct 534 |||||||||||| ||||||||||||| Sbjct: 2305 agttttccttttttcccctttttcct 2330
>ref|NM_001014191.1| Rattus norvegicus similar to hypothetical protein D4Ertd89e (RGD1305703), mRNA Length = 2708 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 agttttccttttctcccctttttcct 534 |||||||||||| ||||||||||||| Sbjct: 2305 agttttccttttttcccctttttcct 2330
>ref|XM_482939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tttccttttctcccctttttc 532 ||||||||||||||||||||| Sbjct: 1340 tttccttttctcccctttttc 1320
>ref|XM_467348.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1067 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 586 cctcatcctcggcctcacctccacc 610
>ref|XM_507521.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1218_D07.23 mRNA Length = 1287 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 803 cctcatcctcggcctcacctccacc 827
>ref|XM_506926.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1218_D07.23 mRNA Length = 1349 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 883 cctcatcctcggcctcacctccacc 907
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cgccaagaaggccggcatcgacctc 406 |||| |||||||||||||||||||| Sbjct: 142466 cgccgagaaggccggcatcgacctc 142490
>gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, complete sequence Length = 168656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 gtcaagctcaggctctccacc 340 ||||||||||||||||||||| Sbjct: 60065 gtcaagctcaggctctccacc 60045
>gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence Length = 197096 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 ctcaacaagaaatgagtgatg 424 ||||||||||||||||||||| Sbjct: 26697 ctcaacaagaaatgagtgatg 26717
>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete sequence Length = 107677 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttccta 535 ||||||||||||||| ||||||||| Sbjct: 77043 ttttccttttctcccatttttccta 77019
>gb|AC150480.3| Rhinolophus ferrumequinum clone VMRC7-380O7, complete sequence Length = 171158 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 ttttccttttctccccttttt 531 ||||||||||||||||||||| Sbjct: 26700 ttttccttttctccccttttt 26680
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 cgccaagaaggccggcatcga 402 ||||||||||||||||||||| Sbjct: 257273 cgccaagaaggccggcatcga 257293
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aagcgctacgtcaagctcagg 331 ||||||||||||||||||||| Sbjct: 178958 aagcgctacgtcaagctcagg 178938
>gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, complete sequence Length = 175832 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 556 cttataaataaatgtcccccttttg 580 |||||||||||||| |||||||||| Sbjct: 135930 cttataaataaatgacccccttttg 135906
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 aaccgggccaacaaggtgtcc 238 ||||||||||||||||||||| Sbjct: 3942353 aaccgggccaacaaggtgtcc 3942333
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 ggcctcgacgccgtcgccaagaaggccgg 396 ||||||| ||||| ||||||||||||||| Sbjct: 1871500 ggcctcgccgccgccgccaagaaggccgg 1871528
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tttccttttctcccctttttc 532 ||||||||||||||||||||| Sbjct: 23473400 tttccttttctcccctttttc 23473380
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tgcagtacaagaagctgtggt 299 ||||||||||||||||||||| Sbjct: 19426286 tgcagtacaagaagctgtggt 19426266
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 tccgcagcaacgccaacgccgcctc 87 ||||||||||||||| ||||||||| Sbjct: 7193113 tccgcagcaacgccatcgccgcctc 7193089 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gcctcacctccaccgcggtctcca 152 ||||||||||||| |||||||||| Sbjct: 14735490 gcctcacctccacggcggtctcca 14735467
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 28998240 cctcatcctcggcctcacctccacc 28998264
>gb|AC004086.14| Homo sapiens 12 PAC RP3-329E11 (Roswell Park Cancer Institute Human Bac Library) complete sequence Length = 94508 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 507 tcagttttccttttctccccttttt 531 ||||||||| ||||||||||||||| Sbjct: 28439 tcagttttctttttctccccttttt 28463
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 ttttccttttctccccttttt 531 ||||||||||||||||||||| Sbjct: 440314 ttttccttttctccccttttt 440294
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL) and NarX-like (narX) genes, complete sequence; NarK (narK), NarM (narM), NarG (narG), NarH (narH), NarJ (narJ), and NarI (narI) genes, complete cds; and unknown gene Length = 15150 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 cgccaagaaggccggcatcga 402 ||||||||||||||||||||| Sbjct: 11656 cgccaagaaggccggcatcga 11676
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggcctcagcctcggcctcacc 136 ||||||||||||||||||||| Sbjct: 902935 ggcctcagcctcggcctcacc 902915 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggcctcagcctcggcctcacc 136 ||||||||||||||||||||| Sbjct: 219336 ggcctcagcctcggcctcacc 219316
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tgcagtacaagaagctgtggt 299 ||||||||||||||||||||| Sbjct: 115824 tgcagtacaagaagctgtggt 115804
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 agaaggccggcatcgacctca 407 ||||||||||||||||||||| Sbjct: 4649822 agaaggccggcatcgacctca 4649842
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tcgagaagcacggcctcgacg 377 ||||||||||||||||||||| Sbjct: 1053765 tcgagaagcacggcctcgacg 1053745 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 381 tcgccaagaaggccggcatcgacctcaa 408 |||||| |||||||||||||||| |||| Sbjct: 1834224 tcgccaggaaggccggcatcgacatcaa 1834197
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 tccgcagcaacgccaacgccgcctc 87 ||||||||||||||| ||||||||| Sbjct: 70524 tccgcagcaacgccatcgccgcctc 70500
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 tccgcagcaacgccaacgccgcctc 87 ||||||||||||||| ||||||||| Sbjct: 28117 tccgcagcaacgccatcgccgcctc 28093
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tttccttttctcccctttttc 532 ||||||||||||||||||||| Sbjct: 64815 tttccttttctcccctttttc 64795
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 44405 cctcatcctcggcctcacctccacc 44429
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 81298 cctcatcctcggcctcacctccacc 81322
>emb|Y00142.1|SLXP55 Streptomyces lividans DNA for xp55 protein and p49 protein Length = 4540 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 cgccaagaaggccggcatcga 402 ||||||||||||||||||||| Sbjct: 3677 cgccaagaaggccggcatcga 3697
>dbj|AK105992.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H02, full insert sequence Length = 1349 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 883 cctcatcctcggcctcacctccacc 907
>dbj|AK071752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113K24, full insert sequence Length = 1066 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 585 cctcatcctcggcctcacctccacc 609
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence Length = 233833 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 tccttttctcccctttttcct 534 ||||||||||||||||||||| Sbjct: 64845 tccttttctcccctttttcct 64825
>dbj|AK060227.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G11, full insert sequence Length = 1287 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cctcagcctcggcctcacctccacc 142 ||||| ||||||||||||||||||| Sbjct: 803 cctcatcctcggcctcacctccacc 827
>emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chromosome 4, complete sequence Length = 183261 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 ttttccttttctccccttttt 531 ||||||||||||||||||||| Sbjct: 120336 ttttccttttctccccttttt 120356
>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence Length = 185966 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 tccttttctcccctttttcct 534 ||||||||||||||||||||| Sbjct: 176479 tccttttctcccctttttcct 176459
>dbj|AP002075.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2230O14, complete sequence Length = 118977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tttatcttcagttttcctttt 520 ||||||||||||||||||||| Sbjct: 83947 tttatcttcagttttcctttt 83967
>dbj|AB017138.1| Pseudomonas putida malonate decarboxylase gene cluster (mdcA, mdcB, mdcC, mdcD, mdcE, mdcG, mdcH, mdcL and mdcM genes), complete cds Length = 8090 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 cgccgcctcgctcgggttcgccacctcgc 107 |||||||||| |||||| ||||||||||| Sbjct: 249 cgccgcctcgatcgggtacgccacctcgc 277
>ref|NM_128905.2| Arabidopsis thaliana structural constituent of ribosome AT2G33450 mRNA, complete cds Length = 626 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 294 ttctctaaccacaagaccaagaag 317
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence Length = 203838 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 cttcagttttccttttctcc 524 |||||||||||||||||||| Sbjct: 9226 cttcagttttccttttctcc 9207
>gb|AC159205.2| Mus musculus BAC clone RP23-233O17 from chromosome 13, complete sequence Length = 202409 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttttcct 534 ||||||||||||| |||||||||| Sbjct: 9488 ttttccttttctctcctttttcct 9511
>ref|XM_421335.1| PREDICTED: Gallus gallus similar to KIAA1409 (LOC423426), mRNA Length = 7074 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cagcaatttgtgaacctgca 282 |||||||||||||||||||| Sbjct: 6454 cagcaatttgtgaacctgca 6435
>gb|AC146698.10| Mus musculus chromosome 13, clone RP24-342B2, complete sequence Length = 122164 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ataaataaatgtcccccttt 578 |||||||||||||||||||| Sbjct: 69326 ataaataaatgtcccccttt 69307
>gb|AC116527.18| Mus musculus chromosome 16, clone RP24-354B8, complete sequence Length = 165306 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttcct 534 |||||||||| ||||||||||||| Sbjct: 40766 ttttccttttttcccctttttcct 40743
>ref|NM_001007254.1| Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), transcript variant 2, mRNA Length = 5667 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 3005 tggatttatcttcagtttttcttt 3028
>ref|NM_001695.3| Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), transcript variant 1, mRNA Length = 5721 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 3059 tggatttatcttcagtttttcttt 3082
>gb|AC140201.3| Mus musculus BAC clone RP23-267F15 from chromosome 16, complete sequence Length = 166079 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 148399 ttttccttttctcccctttt 148380
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 atcgagaagcacggcctcgacgcc 379 ||||||||||||||| |||||||| Sbjct: 2648003 atcgagaagcacggcatcgacgcc 2647980
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete sequence Length = 221134 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 57669 ttttccttttctcccctttt 57688 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 57653 ttttccttttctcccctttt 57672
>ref|XM_755410.1| Ustilago maydis 521 hypothetical protein (UM04356.1) partial mRNA Length = 9195 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tccgcagcaacgccaacgcc 82 |||||||||||||||||||| Sbjct: 5450 tccgcagcaacgccaacgcc 5469
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cgccaagaaggccggcatcg 401 |||||||||||||||||||| Sbjct: 2294308 cgccaagaaggccggcatcg 2294327
>ref|XM_388604.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08428.1) partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ccaacaccaagaacaccatcgtcg 182 |||||||||||| ||||||||||| Sbjct: 92 ccaacaccaagatcaccatcgtcg 115
>gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, complete sequence Length = 99973 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttttcct 534 ||||||||||||||| |||||||| Sbjct: 46963 ttttccttttctcccatttttcct 46986
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttcct 534 |||||||||||| ||||||||||| Sbjct: 78194 ttttccttttcttccctttttcct 78171
>gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome 12, complete sequence Length = 149712 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caagaaatgagtgatgatga 428 |||||||||||||||||||| Sbjct: 64261 caagaaatgagtgatgatga 64280
>gb|AC116651.6| Homo sapiens BAC clone RP11-799M12 from 4, complete sequence Length = 61067 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 aagaccaagaagcagcaatt 270 |||||||||||||||||||| Sbjct: 54923 aagaccaagaagcagcaatt 54942
>gb|BC045260.1| Xenopus laevis heterogeneous ribonuclear particle protein, mRNA (cDNA clone MGC:52620 IMAGE:4681284), complete cds Length = 1632 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 taaataaatgtccccctttt 579 |||||||||||||||||||| Sbjct: 1552 taaataaatgtccccctttt 1571
>ref|XM_541567.2| PREDICTED: Canis familiaris similar to F28C1.3a (LOC484452), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gcctcggcctcacctccacc 142 |||||||||||||||||||| Sbjct: 1574 gcctcggcctcacctccacc 1593
>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence Length = 228367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 32370 ttttccttttctcccctttt 32351
>gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, complete sequence Length = 210222 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 139416 ttttccttttctcccctttt 139397 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 139400 ttttccttttctcccctttt 139381
>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence Length = 123565 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 aagaccaagaagcagcaatttgtg 274 |||||||||||||||||| ||||| Sbjct: 46484 aagaccaagaagcagcaagttgtg 46461
>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence Length = 139330 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 aagaccaagaagcagcaatttgtg 274 |||||||||||||||||| ||||| Sbjct: 107266 aagaccaagaagcagcaagttgtg 107289
>emb|AL445423.13| Human DNA sequence from clone RP11-295M18 on chromosome 1 Contains the 3' end of a novel gene (FLJ22390), two novel genes, the HLX1 gene for H2.0-like homeo box 1 (Drosophila) and four CpG islands, complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 tgctgtgctcctactcctgcccgc 42 |||||||||||||| ||||||||| Sbjct: 19829 tgctgtgctcctacccctgcccgc 19852
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 agcatatcttcttgatttcc 453 |||||||||||||||||||| Sbjct: 51577 agcatatcttcttgatttcc 51558
>ref|NG_004051.1| Mus musculus immunoglobulin lambda chain complex (Igl) on chromosome 16 Length = 234987 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 57982 ttttccttttctcccctttt 58001
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 381 tcgccaagaaggccggcatcgacctcaa 408 ||||||||||||||||| ||||| |||| Sbjct: 129432 tcgccaagaaggccggcctcgacgtcaa 129405
>emb|AL596163.1| Listeria innocua Clip11262 complete genome, segment 1/12 Length = 231450 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aagaagcagcaatttgtgaa 276 |||||||||||||||||||| Sbjct: 215268 aagaagcagcaatttgtgaa 215287
>gb|AE005812.1| Caulobacter crescentus CB15 section 138 of 359 of the complete genome Length = 10602 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tgcccgccgccgccagggct 55 |||||||||||||||||||| Sbjct: 2609 tgcccgccgccgccagggct 2590
>gb|AY114618.1| Arabidopsis thaliana putative chloroplast 50S ribosomal protein L28 (At2g33450) mRNA, complete cds Length = 484 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 253 ttctctaaccacaagaccaagaag 276
>dbj|AK090702.1| Homo sapiens cDNA FLJ33383 fis, clone BRACE2006514 Length = 2035 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 155 tggatttatcttcagtttttcttt 178
>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence Length = 126875 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 aagaccaagaagcagcaatttgtg 274 |||||||||||||||||| ||||| Sbjct: 61425 aagaccaagaagcagcaagttgtg 61448
>gb|AC108683.2| Homo sapiens Xp BAC RP11-539J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61375 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 39808 ttttccttttctcccctttt 39827
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 78057 ttctctaaccacaagaccaagaag 78080
>gb|AC116545.1| Homo sapiens X BAC CTD-2009P21 (CalTech Human BAC Library D) complete sequence Length = 25300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 3750 ttttccttttctcccctttt 3769
>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence Length = 194297 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttcct 534 ||||||||||||||| |||||||| Sbjct: 190366 ttttccttttctcccatttttcct 190343
>gb|AY072373.1| Arabidopsis thaliana putative chloroplast 50S ribosomal protein L28 (At2g33450) mRNA, complete cds Length = 617 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 291 ttctctaaccacaagaccaagaag 314
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggtctccatccccaccaaca 164 |||||||||||||||||||| Sbjct: 914374 ggtctccatccccaccaaca 914355
>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete sequence Length = 174321 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttcct 534 |||||||||| ||||||||||||| Sbjct: 156580 ttttccttttttcccctttttcct 156557
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ttcgccacctcgcagctcgc 114 |||||||||||||||||||| Sbjct: 762583 ttcgccacctcgcagctcgc 762602
>gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181102 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 caagaagctgtggtgggagg 305 |||||||||||||||||||| Sbjct: 92667 caagaagctgtggtgggagg 92686
>emb|BX817300.1|CNS0ACFR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZF06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 838 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttttcct 534 |||||||||||| ||||||||||| Sbjct: 730 ttttccttttctaccctttttcct 707
>emb|BX819519.1|CNS0A8T8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 604 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 274 ttctctaaccacaagaccaagaag 297
>gb|AC007500.7| Homo sapiens chromosome 16 clone RP11-545E2, complete sequence Length = 220562 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 191700 ttttccttttctcccctttt 191719
>gb|AC155263.2| Mus musculus BAC clone RP23-415I11 from chromosome 13, complete sequence Length = 202801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ataaataaatgtcccccttt 578 |||||||||||||||||||| Sbjct: 64136 ataaataaatgtcccccttt 64117
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete sequence Length = 85657 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ctcaacaagaaatgagtgat 423 |||||||||||||||||||| Sbjct: 70851 ctcaacaagaaatgagtgat 70870
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX, narK, orf4, narM, narG, narH, narJ, narI, nifM), partial and complete cds Length = 15819 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gccaagaaggccggcatcga 402 |||||||||||||||||||| Sbjct: 11866 gccaagaaggccggcatcga 11885
>gb|AY087094.1| Arabidopsis thaliana clone 31633 mRNA, complete sequence Length = 616 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttctccaaccacaagaccaagaag 262 ||||| |||||||||||||||||| Sbjct: 294 ttctctaaccacaagaccaagaag 317
>ref|XM_218387.3| PREDICTED: Rattus norvegicus similar to F-box only protein 6 (F-box/G-domain protein 2) (predicted) (LOC292755), mRNA Length = 801 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 259 gaagcagcaatttgtgaacctgcagtacaagaagctgtgg 298 |||| |||||| ||||||||||| | ||||||||||||| Sbjct: 435 gaaggagcaatgtgtgaacctgctggccaagaagctgtgg 474
>dbj|AP004804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0680B05 Length = 138741 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gcctcacctccaccgcggtctcca 152 ||||||||||||| |||||||||| Sbjct: 121357 gcctcacctccacggcggtctcca 121334
>dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0640D01 Length = 164996 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gcctcacctccaccgcggtctcca 152 ||||||||||||| |||||||||| Sbjct: 46574 gcctcacctccacggcggtctcca 46551
>dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, map 22, complete sequences Length = 53637 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttttcct 534 |||||||||||| ||||||||||| Sbjct: 4136 ttttccttttcttccctttttcct 4159
>emb|BX648079.1|HSM808225 Homo sapiens mRNA; cDNA DKFZp686N08183 (from clone DKFZp686N08183) Length = 5620 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 2997 tggatttatcttcagtttttcttt 3020
>dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEC18 Length = 80099 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ctcaacaagaaatgagtgat 423 |||||||||||||||||||| Sbjct: 45216 ctcaacaagaaatgagtgat 45197
>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene, complete cds; BAALC (BAALC) gene, complete cds, alternatively spliced; and frizzled-like protein 6 (FZD6) gene, complete cds Length = 347253 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 79853 tggatttatcttcagtttttcttt 79876
>dbj|AK109778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B10, full insert sequence Length = 1432 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gcctcacctccaccgcggtctcca 152 ||||||||||||| |||||||||| Sbjct: 513 gcctcacctccacggcggtctcca 490
>dbj|AK105919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A02, full insert sequence Length = 1139 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcctcacctccaccgcggtctcca 152 ||||||||||||| |||||||||| Sbjct: 164 gcctcacctccacggcggtctcca 187
>dbj|AK069209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009E01, full insert sequence Length = 1562 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cctccaccgcggtctccatcccca 158 |||||||||| ||||||||||||| Sbjct: 115 cctccaccgccgtctccatcccca 138
>gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 sequence, complete sequence Length = 115963 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ctcaacaagaaatgagtgat 423 |||||||||||||||||||| Sbjct: 13171 ctcaacaagaaatgagtgat 13152
>gb|AY105324.1| Zea mays PCO143177 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 agcacggcctcgacgccgtc 382 |||||||||||||||||||| Sbjct: 938 agcacggcctcgacgccgtc 919
>dbj|AP000843.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684N3, complete sequence Length = 191204 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 162350 ttttccttttctcccctttt 162331
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttttcct 534 |||||||||||| ||||||||||| Sbjct: 168024 ttttccttttcttccctttttcct 168047
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gcacggcctcgacgccgtcg 383 |||||||||||||||||||| Sbjct: 2670634 gcacggcctcgacgccgtcg 2670653
>gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, complete sequence Length = 174164 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ctcggcctcacctccaccgc 144 |||||||||||||||||||| Sbjct: 124683 ctcggcctcacctccaccgc 124664
>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete sequence Length = 164668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 tttccttttctccccttttt 531 |||||||||||||||||||| Sbjct: 8476 tttccttttctccccttttt 8457
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agtaaccttataaataaatg 569 |||||||||||||||||||| Sbjct: 73905 agtaaccttataaataaatg 73924
>gb|AC153953.2| Mus musculus 10 BAC RP24-394B11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163098 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctgcccctttctggagaaga 212 |||||||||||||||||||| Sbjct: 74790 ctgcccctttctggagaaga 74771
>dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1639H6, complete sequence Length = 140609 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tggatttatcttcagttttccttt 519 ||||||||||||||||||| |||| Sbjct: 63927 tggatttatcttcagtttttcttt 63950
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292 region, complete sequence Length = 165942 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 511 ttttccttttctcccctttttcct 534 |||||||||||| ||||||||||| Sbjct: 70046 ttttccttttcttccctttttcct 70069
>dbj|AP003029.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTC-343F17, complete sequence Length = 142882 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttttccttttctcccctttt 530 |||||||||||||||||||| Sbjct: 33081 ttttccttttctcccctttt 33062 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,497,545 Number of Sequences: 3902068 Number of extensions: 7497545 Number of successful extensions: 177268 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 175916 Number of HSP's gapped (non-prelim): 1351 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
