ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd13f04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009521.1| Triticum aestivum clone wr1.pk0104.b6:fis, full insert mRNA sequence Length = 1032 Score = 1033 bits (521), Expect = 0.0 Identities = 545/553 (98%) Strand = Plus / Plus Query: 92 agatgccgtcctagaagcagctaaaaaggcaaaggaggctgggagcacccgattttgcat 151 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 8 agatgccgtcctagaagcagcaaaaaaggcaaaggaggctgggagcacccgattttgcat 67 Query: 152 gggagccgcatggagagagacaattggcaggaaaacaaacttcaaccagattcttgaata 211 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 68 gggagccgcatggagagagacaattggcaggaaaacaaatttcaaccagattcttgaata 127 Query: 212 tgtcaaggacataagaggtatgggcatggaggtctgttgcaccctgggcatgctagagaa 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 tgtcaaggacataagaggtatgggcatggaggtctgttgcaccctgggcatgctagagaa 187 Query: 272 acagcaagctgaagaactcaagaaggctggacttacagcttataatcataacctagatac 331 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 acaacaagctgaagaactcaagaaggctggacttacagcttataatcataacctagatac 247 Query: 332 atcaagagaatattacccgaacattatttctacaagatcgtatgatgatagattacagac 391 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 248 atcaagagaatattaccccaacattatttctacaagatcgtacgatgatagattacagac 307 Query: 392 tcttcagcatgtccgtgaagctggaataagcgtctgctcaggtggaattattggtcttgg 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 tcttcagcatgtccgtgaagctggaataagcgtctgctcaggtggaattattggtcttgg 367 Query: 452 agaggcggaggaagaccgtgtagggctgttgcatacactggccactttgccaacacaccc 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 agaggcggaggaagaccgtgtagggctgttgcatacactggccactttgccaacacaccc 427 Query: 512 agagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggatcagaa 571 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 428 agagagcgttcctatcaatgcattgattgctgtcaaaggcacgcctcttcaggatcagaa 487 Query: 572 gcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaaa 631 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 488 gcctgtagagatatgggaaatgatccgcatgattgccagcgcacggattgtgatgccaaa 547 Query: 632 ggcaatggtgaga 644 ||||||||||||| Sbjct: 548 ggcaatggtgaga 560
>ref|XM_483570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 846 bits (427), Expect = 0.0 Identities = 589/643 (91%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 367 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 426 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaagg 120 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 427 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaagg 486 Query: 121 caaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattggca 180 |||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| | Sbjct: 487 caaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattggga 546 Query: 181 ggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggtatgggcatgg 240 |||||||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 547 ggaaaacaaattttaatcagatccttgaatatgtcaaggacattagaggtatgggcatgg 606 Query: 241 aggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactcaagaaggctg 300 ||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 607 aggtctgttgcactcttggcatgctagagaagcaacaagctgaagaactcaagaaggctg 666 Query: 301 gacttacagcttataatcataacctagatacatcaagagaatattacccgaacattattt 360 | |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 667 ggcttacagcatataatcataatttagatacatcaagagaatattaccccaacattattt 726 Query: 361 ctacaagatcgtatgatgatagattacagactcttcagcatgtccgtgaagctggaataa 420 | |||||||| ||||| |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 727 ccacaagatcatatgacgatagactgcagactcttgagcatgtccgtgaagctggaataa 786 Query: 421 gcgtctgctcaggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgt 480 || | |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 787 gcatatgctcaggtggaattattggtcttggagaggcagaggaggaccgtgtaggattgt 846 Query: 481 tgcatacactggccactttgccaacacacccagagagtgttcctatcaatgcattgattg 540 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| ||| Sbjct: 847 tgcatacactggctactttgcctgcacacccagagagtgttcctattaatgcattggttg 906 Query: 541 ctgtcaaaggcacacctcttcaggatcagaagcctgtagagatatgggaaatgatccgca 600 ||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 907 ctgtcaaaggcacgccccttcaagatcagaagcctgtagagatctgggaaatgatccgca 966 Query: 601 tgattgccagcgctcggattgtgatgccaaaggcaatggtgag 643 ||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 967 tgattgccacagctcgaattgtgatgccgaaggcaatggtgag 1009
>dbj|AK101236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031K02, full insert sequence Length = 1447 Score = 846 bits (427), Expect = 0.0 Identities = 589/643 (91%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 367 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 426 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaagg 120 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 427 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaagg 486 Query: 121 caaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattggca 180 |||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| | Sbjct: 487 caaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattggga 546 Query: 181 ggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggtatgggcatgg 240 |||||||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 547 ggaaaacaaattttaatcagatccttgaatatgtcaaggacattagaggtatgggcatgg 606 Query: 241 aggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactcaagaaggctg 300 ||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 607 aggtctgttgcactcttggcatgctagagaagcaacaagctgaagaactcaagaaggctg 666 Query: 301 gacttacagcttataatcataacctagatacatcaagagaatattacccgaacattattt 360 | |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 667 ggcttacagcatataatcataatttagatacatcaagagaatattaccccaacattattt 726 Query: 361 ctacaagatcgtatgatgatagattacagactcttcagcatgtccgtgaagctggaataa 420 | |||||||| ||||| |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 727 ccacaagatcatatgacgatagactgcagactcttgagcatgtccgtgaagctggaataa 786 Query: 421 gcgtctgctcaggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgt 480 || | |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 787 gcatatgctcaggtggaattattggtcttggagaggcagaggaggaccgtgtaggattgt 846 Query: 481 tgcatacactggccactttgccaacacacccagagagtgttcctatcaatgcattgattg 540 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| ||| Sbjct: 847 tgcatacactggctactttgcctgcacacccagagagtgttcctattaatgcattggttg 906 Query: 541 ctgtcaaaggcacacctcttcaggatcagaagcctgtagagatatgggaaatgatccgca 600 ||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 907 ctgtcaaaggcacgccccttcaagatcagaagcctgtagagatctgggaaatgatccgca 966 Query: 601 tgattgccagcgctcggattgtgatgccaaaggcaatggtgag 643 ||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 967 tgattgccacagctcgaattgtgatgccgaaggcaatggtgag 1009
>dbj|AK059296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E10, full insert sequence Length = 1440 Score = 833 bits (420), Expect = 0.0 Identities = 589/644 (91%), Gaps = 1/644 (0%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 309 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 368 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaa-g 119 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||| | Sbjct: 369 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaaag 428 Query: 120 gcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattggc 179 ||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 429 gcaaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattggg 488 Query: 180 aggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggtatgggcatg 239 ||||||||||| || || ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 489 aggaaaacaaattttaatcagatccttgaatatgtcaaggacattagaggtatgggcatg 548 Query: 240 gaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactcaagaaggct 299 |||||||||||||| || |||||||||||||| || |||||||||||||||||||||||| Sbjct: 549 gaggtctgttgcactcttggcatgctagagaagcaacaagctgaagaactcaagaaggct 608 Query: 300 ggacttacagcttataatcataacctagatacatcaagagaatattacccgaacattatt 359 || |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 609 gggcttacagcatataatcataatttagatacatcaagagaatattaccccaacattatt 668 Query: 360 tctacaagatcgtatgatgatagattacagactcttcagcatgtccgtgaagctggaata 419 || |||||||| ||||| |||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 669 tccacaagatcatatgacgatagactgcagactcttgagcatgtccgtgaagctggaata 728 Query: 420 agcgtctgctcaggtggaattattggtcttggagaggcggaggaagaccgtgtagggctg 479 ||| | |||||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 729 agcatatgctcaggtggaattattggtcttggagaggcagaggaggaccgtgtaggattg 788 Query: 480 ttgcatacactggccactttgccaacacacccagagagtgttcctatcaatgcattgatt 539 |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 789 ttgcatacactggctactttgcctgcacacccagagagtgttcctattaatgcattggtt 848 Query: 540 gctgtcaaaggcacacctcttcaggatcagaagcctgtagagatatgggaaatgatccgc 599 |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 849 gctgtcaaaggcacgccccttcaagatcagaagcctgtagagatctgggaaatgatccgc 908 Query: 600 atgattgccagcgctcggattgtgatgccaaaggcaatggtgag 643 |||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 909 atgattgccacagctcgaattgtgatgccgaaggcaatggtgag 952
>gb|AY109523.1| Zea mays CL765_1 mRNA sequence Length = 1412 Score = 511 bits (258), Expect = e-142 Identities = 381/422 (90%) Strand = Plus / Plus Query: 222 ataagaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagct 281 ||||| |||||||||||||||||||||||||| || |||||| |||||||||| |||||| Sbjct: 593 ataaggggtatgggcatggaggtctgttgcacactaggcatgatagagaaacaacaagct 652 Query: 282 gaagaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaa 341 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 653 gaagaactcaagaaggctggacttacagcatataatcataacctagatacatcaagagag 712 Query: 342 tattacccgaacattatttctacaagatcgtatgatgatagattacagactcttcagcat 401 ||||| || ||||||||| | |||||||| |||||||||||| | ||||||||| ||||| Sbjct: 713 tattatcccaacattattaccacaagatcatatgatgatagactgcagactcttgagcat 772 Query: 402 gtccgtgaagctggaataagcgtctgctcaggtggaattattggtcttggagaggcggag 461 ||||||||||||||||||||| |||||||||||||||| ||||||||||| || || ||| Sbjct: 773 gtccgtgaagctggaataagcatctgctcaggtggaatcattggtcttggtgaagcagag 832 Query: 462 gaagaccgtgtagggctgttgcatacactggccactttgccaacacacccagagagtgtt 521 || ||||| |||||| |||||||||| || || || ||||| |||||||||||||| ||| Sbjct: 833 gaggaccgggtagggttgttgcataccctagctaccttgcctacacacccagagagcgtt 892 Query: 522 cctatcaatgcattgattgctgtcaaaggcacacctcttcaggatcagaagcctgtagag 581 ||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| Sbjct: 893 cctattaatgcattggttgctgtaaaaggcacacctcttgaggaccagaagcctgtagag 952 Query: 582 atatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaaaggcaatggtg 641 || |||||||||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 953 atctgggaaatgatccgcatgatcgccactgctcggatcacgatgccaaaggcaatggtg 1012 Query: 642 ag 643 || Sbjct: 1013 ag 1014 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 3 aagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagtacc 62 ||||||||||| ||||| ||||||||||| ||||| || ||||| |||||||||| || Sbjct: 374 aagactggtggatgcagtgaagattgttcttactgtcctcagtcatcaagatacaacact 433 Query: 63 ggattgaaggc 73 ||||||||||| Sbjct: 434 ggattgaaggc 444 Score = 65.9 bits (33), Expect = 2e-07 Identities = 55/64 (85%) Strand = Plus / Plus Query: 130 ctgggagcacccgattttgcatgggagccgcatggagagagacaattggcaggaaaacaa 189 ||||||||||||| |||||||||| ||||||||||| || |||||||||||| ||| Sbjct: 501 ctgggagcacccgnnnnngcatgggagctgcatggagagaaaccattggcaggaaatcaa 560 Query: 190 actt 193 |||| Sbjct: 561 actt 564
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 283 bits (143), Expect = 3e-73 Identities = 194/211 (91%) Strand = Plus / Plus Query: 225 agaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaa 284 ||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 27030154 agaggtatgggcatggaggtctgttgcactcttggcatgctagagaagcaacaagctgaa 27030213 Query: 285 gaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaatat 344 ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 27030214 gaactcaagaaggctgggcttacagcatataatcataatttagatacatcaagagaatat 27030273 Query: 345 tacccgaacattatttctacaagatcgtatgatgatagattacagactcttcagcatgtc 404 ||||| ||||||||||| |||||||| ||||| |||||| | ||||||||| |||||||| Sbjct: 27030274 taccccaacattatttccacaagatcatatgacgatagactgcagactcttgagcatgtc 27030333 Query: 405 cgtgaagctggaataagcgtctgctcaggtg 435 |||||||||||||||||| | |||||||||| Sbjct: 27030334 cgtgaagctggaataagcatatgctcaggtg 27030364 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 430 caggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgttgcatacac 489 |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 27030746 caggtggaattattggtcttggagaggcagaggaggaccgtgtaggattgttgcatacac 27030805 Query: 490 tggccactttgccaacacacccagagagtgttcctatcaatgcattgattgctgtcaaag 549 |||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 27030806 tggctactttgcctgcacacccagagagtgttcctattaatgcattggttgctgtcaaag 27030865 Query: 550 gcacacctcttcaggatcagaag 572 |||| || ||||| ||||||||| Sbjct: 27030866 gcacgccccttcaagatcagaag 27030888 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 27029406 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 27029465 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaagg 120 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 27029466 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaagg 27029525 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 118 aggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattg 177 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||| Sbjct: 27029698 aggcaaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattg 27029757 Query: 178 gcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacat 223 | ||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 27029758 ggaggaaaacaaattttaatcagatccttgaatatgtcaaggacat 27029803 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 571 agcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaa 630 ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 27031036 agcctgtagagatctgggaaatgatccgcatgattgccacagctcgaattgtgatgccga 27031095 Query: 631 aggcaatggtgag 643 ||||||||||||| Sbjct: 27031096 aggcaatggtgag 27031108
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 283 bits (143), Expect = 3e-73 Identities = 194/211 (91%) Strand = Plus / Plus Query: 225 agaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaa 284 ||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 131554 agaggtatgggcatggaggtctgttgcactcttggcatgctagagaagcaacaagctgaa 131613 Query: 285 gaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaatat 344 ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 131614 gaactcaagaaggctgggcttacagcatataatcataatttagatacatcaagagaatat 131673 Query: 345 tacccgaacattatttctacaagatcgtatgatgatagattacagactcttcagcatgtc 404 ||||| ||||||||||| |||||||| ||||| |||||| | ||||||||| |||||||| Sbjct: 131674 taccccaacattatttccacaagatcatatgacgatagactgcagactcttgagcatgtc 131733 Query: 405 cgtgaagctggaataagcgtctgctcaggtg 435 |||||||||||||||||| | |||||||||| Sbjct: 131734 cgtgaagctggaataagcatatgctcaggtg 131764 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 430 caggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgttgcatacac 489 |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 132146 caggtggaattattggtcttggagaggcagaggaggaccgtgtaggattgttgcatacac 132205 Query: 490 tggccactttgccaacacacccagagagtgttcctatcaatgcattgattgctgtcaaag 549 |||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 132206 tggctactttgcctgcacacccagagagtgttcctattaatgcattggttgctgtcaaag 132265 Query: 550 gcacacctcttcaggatcagaag 572 |||| || ||||| ||||||||| Sbjct: 132266 gcacgccccttcaagatcagaag 132288 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 130806 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 130865 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaagg 120 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 130866 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaagg 130925 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 118 aggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattg 177 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||| Sbjct: 131098 aggcaaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattg 131157 Query: 178 gcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacat 223 | ||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 131158 ggaggaaaacaaattttaatcagatccttgaatatgtcaaggacat 131203 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 571 agcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaa 630 ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132436 agcctgtagagatctgggaaatgatccgcatgattgccacagctcgaattgtgatgccga 132495 Query: 631 aggcaatggtgag 643 ||||||||||||| Sbjct: 132496 aggcaatggtgag 132508
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 283 bits (143), Expect = 3e-73 Identities = 194/211 (91%) Strand = Plus / Plus Query: 225 agaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaa 284 ||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 1241 agaggtatgggcatggaggtctgttgcactcttggcatgctagagaagcaacaagctgaa 1300 Query: 285 gaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaatat 344 ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1301 gaactcaagaaggctgggcttacagcatataatcataatttagatacatcaagagaatat 1360 Query: 345 tacccgaacattatttctacaagatcgtatgatgatagattacagactcttcagcatgtc 404 ||||| ||||||||||| |||||||| ||||| |||||| | ||||||||| |||||||| Sbjct: 1361 taccccaacattatttccacaagatcatatgacgatagactgcagactcttgagcatgtc 1420 Query: 405 cgtgaagctggaataagcgtctgctcaggtg 435 |||||||||||||||||| | |||||||||| Sbjct: 1421 cgtgaagctggaataagcatatgctcaggtg 1451 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 430 caggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgttgcatacac 489 |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 1833 caggtggaattattggtcttggagaggcagaggaggaccgtgtaggattgttgcatacac 1892 Query: 490 tggccactttgccaacacacccagagagtgttcctatcaatgcattgattgctgtcaaag 549 |||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 1893 tggctactttgcctgcacacccagagagtgttcctattaatgcattggttgctgtcaaag 1952 Query: 550 gcacacctcttcaggatcagaag 572 |||| || ||||| ||||||||| Sbjct: 1953 gcacgccccttcaagatcagaag 1975 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 493 taaagacaggtgggtgcagcgaagattgttcatactgcccccagtcctcaagatacagta 552 Query: 61 ccggattgaaggctgaaaaattaatgaagaaagatgccgtcctagaagcagctaaaaagg 120 | ||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 553 caggattgaaggcacaaaaattaatgaataaagatgctgtcttagaagcagcaaaaaagg 612 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 118 aggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattg 177 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||| Sbjct: 785 aggcaaaggaggctgggagcacccgcttttgcatgggagcagcatggagagaaaccattg 844 Query: 178 gcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacat 223 | ||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 845 ggaggaaaacaaattttaatcagatccttgaatatgtcaaggacat 890 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 571 agcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaa 630 ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 2123 agcctgtagagatctgggaaatgatccgcatgattgccacagctcgaattgtgatgccga 2182 Query: 631 aggcaatggtgag 643 ||||||||||||| Sbjct: 2183 aggcaatggtgag 2195
>gb|DQ269214.1| Glycine max biotin synthase mRNA, complete cds Length = 1400 Score = 149 bits (75), Expect = 1e-32 Identities = 171/203 (84%) Strand = Plus / Plus Query: 117 aaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaatt 176 |||||||| |||||||||||||| || ||||| ||||| || || ||||| || ||| | Sbjct: 489 aaggcaaaagaggctgggagcactcgcttttgtatgggtgctgcgtggagggatacacta 548 Query: 177 ggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggtatgggc 236 || || || || |||||||||||||| ||||||||||| || |||||||| | ||||| Sbjct: 549 ggaagaaagaccaacttcaaccagatccttgaatatgtgaaagacataagggacatggga 608 Query: 237 atggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactcaagaag 296 |||||||| ||||||||||| |||||||| ||||||||||| |||| |||||||||||| Sbjct: 609 atggaggtttgttgcacccttggcatgctggagaaacagcaggctgttgaactcaagaag 668 Query: 297 gctggacttacagcttataatca 319 || || || || ||||||||||| Sbjct: 669 gcaggtctcactgcttataatca 691 Score = 81.8 bits (41), Expect = 3e-12 Identities = 137/170 (80%) Strand = Plus / Plus Query: 435 ggaattattggtcttggagaggcggaggaagaccgtgtagggctgttgcatacactggcc 494 |||||||| || |||||||| || ||||| || |||||||| |||| |||||| || | Sbjct: 807 ggaattatagggcttggagaagcagaggaggatcgtgtaggtntgttacatacattgtca 866 Query: 495 actttgccaacacacccagagagtgttcctatcaatgcattgattgctgtcaaaggcaca 554 || | || || || |||||||||||||||| |||||| | |||||| || || || Sbjct: 867 acacttcccacccatncagagagtgttcctattaatgcactttgtgctgtnaagggaacc 926 Query: 555 cctcttcaggatcagaagcctgtagagatatgggaaatgatccgcatgat 604 |||||| |||||||||||||||| || |||||||| ||||| |||||||| Sbjct: 927 cctcttgaggatcagaagcctgttgaaatatgggagatgattcgcatgat 976
>ref|NM_129897.3| Arabidopsis thaliana BIO2 (BIOTIN AUXOTROPH 2); biotin synthase AT2G43360 (BIO2) mRNA, complete cds Length = 1413 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 485 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 544 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 545 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 604 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 605 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 664 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 665 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 723 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 881 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 940 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 941 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 1000 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 1001 ccaaaagcgatggtgaga 1018
>gb|BT024899.1| Arabidopsis thaliana At2g43360 mRNA, complete cds Length = 1137 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 376 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 435 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 436 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 495 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 496 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 555 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 556 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 614 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 772 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 831 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 832 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 891 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 892 ccaaaagcgatggtgaga 909
>emb|BX819210.1|CNS0A9XF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1301 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 485 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 544 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 545 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 604 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 605 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 664 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 665 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 723 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || ||||| || |||||| | || Sbjct: 881 caccctgagagtgttcccattaatgctctacttgcagtgaaaggtactcctcttgaagac 940 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 941 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 1000 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 1001 ccaaaagcgatggtgaga 1018
>gb|AY088152.1| Arabidopsis thaliana clone 42038 mRNA, complete sequence Length = 1342 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 457 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 516 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 517 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 576 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 577 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 636 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 637 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 695 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 853 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 912 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 ||||| || || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 913 cagaatccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 972 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 973 ccaaaagcgatggtgaga 990
>gb|U31806.1|ATU31806 Arabidopsis thaliana BIO2 protein (BIO2) mRNA, complete cds Length = 1332 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 433 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 492 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 493 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 552 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 553 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 612 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 613 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 671 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 829 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 888 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 889 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 948 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 949 ccaaaagcgatggtgaga 966
>gb|L34413.1|ATHSEACA Arabidopsis thaliana biotin synthase (bioB) mRNA, complete cds Length = 1296 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 436 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 495 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 496 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 555 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | |||||||| ||||| ||| || Sbjct: 556 atggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcactagagcta 615 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 616 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 674 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 832 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 891 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 892 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 951 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 952 ccaaaagcgatggtgaga 969
>emb|BX818983.1|CNS0A9QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1306 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 459 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 518 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 519 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 578 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| |||||| | |||||||| ||||| ||| || Sbjct: 579 atggggatggaagtgtgctgcacctcaggcatgattgagaaacaacaagcactagagcta 638 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 639 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 697 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 855 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 914 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 915 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 974 Query: 627 ccaaaggcaatggtga 642 ||||| || ||||||| Sbjct: 975 ccaaaagcgatggtga 990 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagatacagta 60 ||||||||||||| || || ||||| |||||||| || || |||||||| ||||| || | Sbjct: 349 taaagactggtggctgtagtgaagactgttcatattgtcctcagtcttcgagataaagca 408 Query: 61 ccggattgaaggc 73 | ||| ||||||| Sbjct: 409 ctggagtgaaggc 421
>gb|BT003848.1| Arabidopsis thaliana clone RAFL15-32-I10 (R20834) putative biotin synthase (Bio B) (At2g43360) mRNA, complete cds Length = 1307 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 111 gctaaaaaggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagag 170 ||||| |||||||| || ||||||||||| || ||||||||||| || || ||| |||| Sbjct: 413 gctaagaaggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagat 472 Query: 171 acaattggcaggaaaacaaacttcaaccagattcttgaatatgtcaaggacataagaggt 230 |||||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||| Sbjct: 473 acaattggacggaaaaccaacttcagccagattcttgaatacatcaaagaaataagaggc 532 Query: 231 atgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaactc 290 ||||| ||||| || || |||||| | |||||| | ||| |||| ||||| ||| || Sbjct: 533 atggggatggaagtttgctgcaccttaggcatgattgaggaacaacaagcactagagcta 592 Query: 291 aagaaggctggacttacagcttataatcataacctagatacatcaagagaatattaccc 349 ||||||||||| || || |||||||| || || || ||||| |||||||| || ||||| Sbjct: 593 aagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtactaccc 651 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctcttcaggat 566 ||||| ||||||||||| || ||||| | |||| || |||||||| |||||| | || Sbjct: 809 caccctgagagtgttcccattaatgctctacttgcagtgaaaggcactcctcttgaagac 868 Query: 567 cagaagcctgtagagatatgggaaatgatccgcatgattgccagcgctcggattgtgatg 626 |||||||| || ||||||||||| |||||| | ||||||| | ||| || ||||| ||| Sbjct: 869 cagaagccagttgagatatgggagatgatcaggatgattggaaccgcacgtattgtaatg 928 Query: 627 ccaaaggcaatggtgaga 644 ||||| || ||||||||| Sbjct: 929 ccaaaagcgatggtgaga 946
>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence Length = 138838 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 430 caggtggaattattggtcttggagaggcggaggaagaccgtgtagggctgttgcatacac 489 ||||||||||||| || |||||||| || ||||| ||||||||||| |||| |||||| Sbjct: 79512 caggtggaattatcgggcttggagaagcagaggacgaccgtgtaggtttgttacatacat 79453 Query: 490 tggccactttgccaacacacccagagagtgttcctatcaatgcattgattgctgtcaaag 549 | | || | || ||||| ||||||||||||||||| |||||| | |||||||| || | Sbjct: 79452 tatcaacacttcctacacatccagagagtgttcctattaatgcacttattgctgtaaagg 79393 Query: 550 gcacacctcttcaggatcagaag 572 | || |||||||||||||||||| Sbjct: 79392 gaacccctcttcaggatcagaag 79370 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 126 gaggctgggagcacccgattttgcatgggagccgcatggagagagacaattggcaggaaa 185 ||||||||||| || || ||||| ||||| || |||||||| || ||||| || || || Sbjct: 81543 gaggctgggagtactcgcttttgtatgggcgctgcatggagggatacaataggaagaaag 81484 Query: 186 acaaacttcaaccagattcttgaatatgtcaa 217 || |||||||||||||| |||||||||||||| Sbjct: 81483 accaacttcaaccagatacttgaatatgtcaa 81452 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 228 ggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaagaa 287 |||||||| |||||||| ||||||||||| |||||||| || ||| | || |||| || Sbjct: 81229 ggtatggggatggaggtgtgttgcacccttggcatgctggataaagatcaggctggtgag 81170 Query: 288 ctcaagaaggctggacttac 307 ||||||||||| || ||||| Sbjct: 81169 ctcaagaaggcaggtcttac 81150 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 571 agcctgtagagatatgggaaatgatccgcatgattgc 607 ||||||| || |||||||| ||||||||||||||||| Sbjct: 78886 agcctgttgaaatatgggagatgatccgcatgattgc 78850
>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete sequence Length = 102057 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 118 aggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattg 177 ||||||| || ||||||||||| || ||||||||||| || || ||| |||| ||||||| Sbjct: 27115 aggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagatacaattg 27056 Query: 178 gcaggaaaacaaacttcaaccagattcttgaata 211 | ||||||| ||||||| ||||||||||||||| Sbjct: 27055 gacggaaaaccaacttcagccagattcttgaata 27022 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 225 agaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaa 284 ||||| ||||| ||||| || || |||||| | |||||| | |||||||| ||||| | Sbjct: 26730 agaggcatggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcacta 26671 Query: 285 gaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaatat 344 || || ||||||||||| || || |||||||| || || || ||||| |||||||| || Sbjct: 26670 gagctaaagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtac 26611 Query: 345 taccc 349 ||||| Sbjct: 26610 taccc 26606 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagata 55 ||||||||||||| || || ||||| |||||||| || || |||||||| ||||| Sbjct: 27448 taaagactggtggctgtagtgaagactgttcatattgtcctcagtcttcgagata 27394 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Minus Query: 579 gagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaaaggcaatg 638 ||||||||||| |||||| | ||||||| | ||| || ||||| |||||||| || ||| Sbjct: 26117 gagatatgggagatgatcaggatgattggaaccgcacgtattgtaatgccaaaagcgatg 26058 Query: 639 gtgaga 644 |||||| Sbjct: 26057 gtgaga 26052
>gb|U24147.1|ATU24147 Arabidopsis thaliana biotin synthase (bioB) gene, complete cds Length = 2815 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 118 aggcaaaggaggctgggagcacccgattttgcatgggagccgcatggagagagacaattg 177 ||||||| || ||||||||||| || ||||||||||| || || ||| |||| ||||||| Sbjct: 1366 aggcaaaagaagctgggagcacacgtttttgcatgggtgctgcttggcgagatacaattg 1425 Query: 178 gcaggaaaacaaacttcaaccagattcttgaata 211 | ||||||| ||||||| ||||||||||||||| Sbjct: 1426 gacggaaaaccaacttcagccagattcttgaata 1459 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 225 agaggtatgggcatggaggtctgttgcaccctgggcatgctagagaaacagcaagctgaa 284 ||||| ||||| ||||| || || |||||| | |||||| | |||||||| ||||| | Sbjct: 1753 agaggcatggggatggaagtttgctgcaccttaggcatgattgagaaacaacaagcacta 1812 Query: 285 gaactcaagaaggctggacttacagcttataatcataacctagatacatcaagagaatat 344 || || ||||||||||| || || |||||||| || || || ||||| |||||||| || Sbjct: 1813 gagctaaagaaggctggcctcactgcttataaccacaatcttgatacttcaagagagtac 1872 Query: 345 taccc 349 ||||| Sbjct: 1873 taccc 1877 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1 taaagactggtgggtgcagcgaagattgttcatactgcccacagtcttcaagata 55 ||||||||||||| || || ||||| |||||||| || || |||||||| ||||| Sbjct: 1033 taaagactggtggctgtagtgaagactgttcatattgtcctcagtcttcgagata 1087 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 579 gagatatgggaaatgatccgcatgattgccagcgctcggattgtgatgccaaaggcaatg 638 ||||||||||| |||||| | ||||||| | ||| || ||||| |||||||| || ||| Sbjct: 2366 gagatatgggagatgatcaggatgattggaaccgcacgtattgtaatgccaaaagcgatg 2425 Query: 639 gtgaga 644 |||||| Sbjct: 2426 gtgaga 2431
>emb|BX820434.1|CNS0A9MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZF01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 546 aaaggcacacctcttcaggatcagaagcctgtagagatatgggaaatgatccgcatgatt 605 |||||||| |||||| | || |||||||| || ||||||||||| |||||| | |||||| Sbjct: 82 aaaggcactcctcttgaagaccagaagccagttgagatatgggagatgatcaggatgatt 141 Query: 606 gccagcgctcggattgtgatgccaaaggcaatggtgaga 644 | | ||| || ||||| |||||||| || ||||||||| Sbjct: 142 ggaaccgcacgtattgtaatgccaaaagcgatggtgaga 180
>gb|AY919315.1|AY919315S1 Raphanus sativus biotin synthase gene, partial cds; and phospholipid hydroperoxide glutathione peroxidase gene promoter region Length = 1321 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 507 cacccagagagtgttcctatcaatgcattgattgctgtcaaaggcacacctctt 560 ||||||||||||||||||| |||||| || |||| || |||||||| |||||| Sbjct: 505 cacccagagagtgttcctaccaatgctctgcttgcagtgaaaggcactcctctt 558 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 618 attgtgatgccaaaggcaatggtgag 643 |||||||||||||| ||||||||||| Sbjct: 707 attgtgatgccaaaagcaatggtgag 732
>ref|XM_380454.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00278.1) partial mRNA Length = 1311 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 399 catgtccgtgaagctggaataagcgtctgctcaggtggaattattggtcttgg 451 ||||||||||| |||||||| | |||||||| ||||||||| | |||||||| Sbjct: 856 catgtccgtgatgctggaattaatgtctgctctggtggaattctgggtcttgg 908
>gb|AC113124.9| Mus musculus chromosome 19, clone RP23-350M1, complete sequence Length = 216547 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 450 ggagaggcggaggaagaccgtgtagggc 477 |||||||||||||||||| ||||||||| Sbjct: 122232 ggagaggcggaggaagacagtgtagggc 122205
>ref|XM_643216.1| Entamoeba histolytica HM-1:IMSS 60S ribosomal protein L38, putative (484.t00008) partial mRNA Length = 234 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 277 aagctgaagaactcaagaaggct 299 ||||||||||||||||||||||| Sbjct: 155 aagctgaagaactcaagaaggct 177
>ref|XM_646184.1| Entamoeba histolytica HM-1:IMSS 60S ribosomal protein L38, putative (173.t00025) partial mRNA Length = 234 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 277 aagctgaagaactcaagaaggct 299 ||||||||||||||||||||||| Sbjct: 155 aagctgaagaactcaagaaggct 177
>gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, complete sequence Length = 219013 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 taaaaaggcaaaggaggctggg 134 |||||||||||||||||||||| Sbjct: 40405 taaaaaggcaaaggaggctggg 40426
>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence Length = 181063 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaggcaaaggaggctggga 135 ||||||||||||||||||||| Sbjct: 177769 aaaaggcaaaggaggctggga 177749
>gb|AC145748.4| Mus musculus BAC clone RP23-31L10 from chromosome 5, complete sequence Length = 220208 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 ctggccactttgccaacacac 509 ||||||||||||||||||||| Sbjct: 135210 ctggccactttgccaacacac 135190
>gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, complete sequence Length = 201822 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 agaactcaagaaggctggact 304 ||||||||||||||||||||| Sbjct: 179852 agaactcaagaaggctggact 179832
>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence Length = 192286 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 agaactcaagaaggctggact 304 ||||||||||||||||||||| Sbjct: 11714 agaactcaagaaggctggact 11694
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 ttataatcataacctagatacatca 335 |||||||||||| |||||||||||| Sbjct: 261818 ttataatcataatctagatacatca 261842
>gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome 5, complete sequence Length = 195640 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ctggccactttgccaacacac 509 ||||||||||||||||||||| Sbjct: 158661 ctggccactttgccaacacac 158681
>emb|AJ969190.1| Helicobacter bizzozeronii partial gyrB gene for gyrase B, strain R-53 Length = 1098 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 agaagcagctaaaaaggcaaaggag 128 |||||| |||||||||||||||||| Sbjct: 798 agaagcggctaaaaaggcaaaggag 822
>gb|AC007027.3| Homo sapiens PAC clone RP5-832O14 from 7, complete sequence Length = 112066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 gcagctaaaaaggcaaaggag 128 ||||||||||||||||||||| Sbjct: 68024 gcagctaaaaaggcaaaggag 68044
>gb|AY234787.1| Bigelowiella natans cytosolic class II fructose-1,6-bisphosphate aldolase (fbaII) mRNA, complete cds Length = 1412 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 tgaagaactcaagaaggctgg 301 ||||||||||||||||||||| Sbjct: 779 tgaagaactcaagaaggctgg 799
>gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, complete sequence Length = 192768 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaggcaaaggaggctgggagc 137 ||||||||||||||||||||| Sbjct: 37868 aaggcaaaggaggctgggagc 37848
>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete sequence Length = 182054 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aaaaggcaaaggaggctggga 135 ||||||||||||||||||||| Sbjct: 43633 aaaaggcaaaggaggctggga 43653
>emb|X73481.1|DHMST1012 D.hydei Dhmst101 (2) gene Length = 4859 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 agctaaaaaggcaaaggaggc 130 ||||||||||||||||||||| Sbjct: 4053 agctaaaaaggcaaaggaggc 4073
>gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complete sequence Length = 160022 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ctcaggtggaattattggtc 447 |||||||||||||||||||| Sbjct: 27706 ctcaggtggaattattggtc 27725
>gb|AC009843.9| Drosophila melanogaster clone BACR01G11, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ctcaggtggaattattggtc 447 |||||||||||||||||||| Sbjct: 190983 ctcaggtggaattattggtc 191002
>gb|BC076336.1| Danio rerio zgc:92878, mRNA (cDNA clone MGC:92878 IMAGE:7118150), complete cds Length = 1303 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ggcaggaaaacaaacttcaa 196 |||||||||||||||||||| Sbjct: 1233 ggcaggaaaacaaacttcaa 1214
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aaaaattaatgaagaaagat 95 |||||||||||||||||||| Sbjct: 182073 aaaaattaatgaagaaagat 182092
>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence Length = 221727 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 agggctgttgcatacactggccac 496 |||||||||| ||||||||||||| Sbjct: 120810 agggctgttgtatacactggccac 120787
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gattacagactcttcagcatgtcc 405 ||||| |||||||||||||||||| Sbjct: 231747 gattagagactcttcagcatgtcc 231724
>gb|AC183528.2| Pan troglodytes BAC clone CH251-737P22 from chromosome 13, complete sequence Length = 202694 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 aacattatttctacaagatc 370 |||||||||||||||||||| Sbjct: 179371 aacattatttctacaagatc 179390
>gb|AY212731.1| Uncultured bacterium clone 37ds5 16S ribosomal RNA gene, partial sequence Length = 1519 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 gaagcctgtagagatatggg 588 |||||||||||||||||||| Sbjct: 986 gaagcctgtagagatatggg 1005
>gb|BC043988.1| Xenopus laevis glial cells missing homolog 1, mRNA (cDNA clone MGC:53973 IMAGE:5570938), complete cds Length = 2334 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 caatgcattgattgctgtca 546 |||||||||||||||||||| Sbjct: 888 caatgcattgattgctgtca 869
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aggctgaaaaattaatgaagaaag 93 |||||||||||||||| ||||||| Sbjct: 736147 aggctgaaaaattaattaagaaag 736170
>gb|AY135329.1| Homo sapiens isolate MRPS31P2 mitochondrial ribosomal protein S31 (MRPS31) pseudogene, nuclear pseudogene, partial sequence Length = 16253 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 aacattatttctacaagatc 370 |||||||||||||||||||| Sbjct: 12025 aacattatttctacaagatc 12006
>emb|AL359457.12| Human DNA sequence from clone RP11-76K19 on chromosome 13 Contains a mitochondrial ribosomal protein S31 (MRPS31) pseudogene an estrogen-related receptor alpha pseudogene (ESRRAP), the 5' end of a novel gene, a novel protein (LOC113201) pseudogene, a novel gene and four CpG islands, complete sequence Length = 129779 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 aacattatttctacaagatc 370 |||||||||||||||||||| Sbjct: 21380 aacattatttctacaagatc 21399
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 agggctgttgcatacactggccac 496 |||||||||| ||||||||||||| Sbjct: 80726 agggctgttgtatacactggccac 80703
>emb|AL160054.14| Human DNA sequence from clone RP11-8C21 on chromosome 9 Contains the 5' end of a novel gene (SHC3), a novel gene (HFSE-1), the CSK2 gene for CDC28 protein kinase regulatory subunit 2 (CKSHS2), the 5' end of the gene for SECIS binding protein 2 (SBP2) and three CpG islands, complete sequence Length = 206200 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agcagctaaaaaggcaaagg 126 |||||||||||||||||||| Sbjct: 7043 agcagctaaaaaggcaaagg 7062
>emb|AL110502.1|HSDJ635E8 Human DNA sequence from clone RP4-635E8 on chromosome 1p33-34.3 Contains part of the SCMH1 gene for sex comb on midleg homolog 1 (Drosophila) and a ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 136649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 aggtctgttgcaccctgggc 260 |||||||||||||||||||| Sbjct: 119956 aggtctgttgcaccctgggc 119937
>emb|Y10196.1|HSPEX Homo sapiens PHEX gene Length = 242825 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaggctgaaaaattaatgaagaaa 92 |||||||||||||||||| ||||| Sbjct: 7878 aaggctgaaaaattaatgcagaaa 7901
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 tggagaggcggaggaagacc 468 |||||||||||||||||||| Sbjct: 92310 tggagaggcggaggaagacc 92329
>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the Gp1ba gene for glycoprotein 1b alpha polypeptide, the Slc25a11 gene for solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier) member 11, the gene for a novel PA domain and C3HC4 type zinc finger (RING finger) containing protein, the Pfn1 gene for profilin 1, five novel genes, the Eno3 gene for muscle enolase 3 beta, the Spag7 gene for sperm associated antigen 7, the Kif1c gene for kinesin family member 1C, a ribosomal protein 37A (Rpl37a) pseudogene, the gene for a novel zinc finger protein and six CpG islands, complete sequence Length = 207086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaaggcaaaggaggctggg 134 |||||||||||||||||||| Sbjct: 130845 aaaaggcaaaggaggctggg 130826
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tagattacagactcttcagc 399 |||||||||||||||||||| Sbjct: 19737 tagattacagactcttcagc 19718
>emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromosome 11, complete sequence Length = 188880 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaaggcaaaggaggctggg 134 |||||||||||||||||||| Sbjct: 94411 aaaaggcaaaggaggctggg 94392
>ref|NM_001002476.1| Danio rerio zgc:92878 (zgc:92878), mRNA Length = 1303 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ggcaggaaaacaaacttcaa 196 |||||||||||||||||||| Sbjct: 1233 ggcaggaaaacaaacttcaa 1214
>gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, complete sequence Length = 118724 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggcatgctagagaaacagc 276 |||||||||||||||||||| Sbjct: 44478 gggcatgctagagaaacagc 44459
>gb|AF506708.1| Homo sapiens CDC28 protein kinase 2 (CKS2) gene, complete cds Length = 8984 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 agcagctaaaaaggcaaagg 126 |||||||||||||||||||| Sbjct: 7839 agcagctaaaaaggcaaagg 7820
>ref|NM_141648.2| Drosophila melanogaster CG8199-RA (CG8199), mRNA Length = 1751 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gaatatgtcaaggacataag 226 |||||||||||||||||||| Sbjct: 1203 gaatatgtcaaggacataag 1222
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 490 tggccactttgccaacacacccagagagtgttcctatcaa 529 |||||| | |||| || |||||||| |||||||||||||| Sbjct: 1356515 tggccaatctgcctactcacccagaaagtgttcctatcaa 1356554
>ref|XM_680347.1| PREDICTED: Danio rerio similar to polymerase (RNA) III (DNA directed) polypeptide H (LOC557311), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ggcaggaaaacaaacttcaa 196 |||||||||||||||||||| Sbjct: 1052 ggcaggaaaacaaacttcaa 1033
>gb|AY051542.1| Drosophila melanogaster GH19141 full length cDNA Length = 1767 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gaatatgtcaaggacataag 226 |||||||||||||||||||| Sbjct: 1212 gaatatgtcaaggacataag 1231
>ref|NG_004674.1| Homo sapiens mitochondrial ribosomal protein S31 pseudogene 2 (MRPS31P2) on chromosome 13 Length = 16253 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 aacattatttctacaagatc 370 |||||||||||||||||||| Sbjct: 12025 aacattatttctacaagatc 12006
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 atacatcaagagaatattacccga 351 |||||||||||||||||| ||||| Sbjct: 9285049 atacatcaagagaatatttcccga 9285072
>gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, region 85D-85E, BAC clone BACR19N07, complete sequence Length = 176933 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gaatatgtcaaggacataag 226 |||||||||||||||||||| Sbjct: 65671 gaatatgtcaaggacataag 65690
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence Length = 105768 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 480 ttgcatacactggccactttgcca 503 ||||||||||| |||||||||||| Sbjct: 94453 ttgcatacacttgccactttgcca 94430
>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence Length = 252650 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaagcagctaaaaaggcaaa 124 |||||||||||||||||||| Sbjct: 7294 gaagcagctaaaaaggcaaa 7313
>gb|AC139720.1| Homo sapiens BAC clone RP11-223C24 from 4, complete sequence Length = 160940 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tgggcatgctagagaaacag 275 |||||||||||||||||||| Sbjct: 42378 tgggcatgctagagaaacag 42359
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 atacatcaagagaatattacccga 351 |||||||||||||||||| ||||| Sbjct: 52390 atacatcaagagaatatttcccga 52413
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 atacatcaagagaatattacccga 351 |||||||||||||||||| ||||| Sbjct: 13459 atacatcaagagaatatttcccga 13482
>dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3 Length = 86536 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 ttgcatacactggccactttgcca 503 ||||||||||| |||||||||||| Sbjct: 47012 ttgcatacacttgccactttgcca 47035
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 ttcaggatcagaagcctgtagaga 582 |||||||||||||||| ||||||| Sbjct: 36076 ttcaggatcagaagccagtagaga 36053
>gb|AF088826.1|AF088826 Ophiopholis aculeata 28S large subunit ribosomal RNA gene, partial sequence Length = 301 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 ggagaggcggaggaagaccgtgta 473 ||||||||||||||||| |||||| Sbjct: 155 ggagaggcggaggaagagcgtgta 178
>gb|U73024.1|U73024 Homo sapiens cosmid clone U54B12 from Xp22.1-22.2, complete sequence Length = 38476 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaggctgaaaaattaatgaagaaa 92 |||||||||||||||||| ||||| Sbjct: 17528 aaggctgaaaaattaatgcagaaa 17551
>gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21 of 118 of the complete sequence Length = 243348 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gaatatgtcaaggacataag 226 |||||||||||||||||||| Sbjct: 94838 gaatatgtcaaggacataag 94857
>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete sequence Length = 491220 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ctcaggtggaattattggtc 447 |||||||||||||||||||| Sbjct: 230106 ctcaggtggaattattggtc 230087
>gb|AF054123.1|AF054123 Rattus norvegicus polymorphic marker D6UIA3 sequence Length = 818 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gatgatagattacagactct 394 |||||||||||||||||||| Sbjct: 522 gatgatagattacagactct 541
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence Length = 175793 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tagattacagactcttcagc 399 |||||||||||||||||||| Sbjct: 29103 tagattacagactcttcagc 29122
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 gattttgcatgggagccgcatgga 165 |||||||||||||||| ||||||| Sbjct: 526454 gattttgcatgggagctgcatgga 526477
>gb|M21214.1|DRORSP2 D.melanogaster segregation distorter (SD) responder (Rsp) element, segment 2 Length = 644 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ctcaggtggaattattggtc 447 |||||||||||||||||||| Sbjct: 580 ctcaggtggaattattggtc 599 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,215,948 Number of Sequences: 3902068 Number of extensions: 6215948 Number of successful extensions: 171785 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 171478 Number of HSP's gapped (non-prelim): 305 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
