ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12p18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1080 bits (545), Expect = 0.0 Identities = 545/545 (100%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119523 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119464 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119463 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 119404 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119403 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119344 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119343 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119284 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119283 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119224 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119223 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119164 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119163 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 119104 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 119044 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118984 Query: 554 gccag 558 ||||| Sbjct: 118983 gccag 118979 Score = 1080 bits (545), Expect = 0.0 Identities = 545/545 (100%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95371 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95430 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95431 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 95490 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95491 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95550 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95551 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95610 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95611 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 95670 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95671 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 95730 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95731 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 95790 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95791 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 95850 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95851 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 95910 Query: 554 gccag 558 ||||| Sbjct: 95911 gccag 95915
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118304 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 118245 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 118244 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 118185 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118184 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 118125 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118124 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 118065 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118064 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 118005 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118004 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 117945 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117944 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 117885 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117884 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 117825 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117824 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 117765 Query: 554 gccag 558 ||||| Sbjct: 117764 gccag 117760
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119329 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119328 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 119269 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119268 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119209 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119208 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119149 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119148 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119089 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119088 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119029 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119028 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118969 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118968 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118909 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118908 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118849 Query: 554 gccag 558 ||||| Sbjct: 118848 gccag 118844 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95827 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95828 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 95887 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95947 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96007 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96067 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96127 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96187 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96247 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96248 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 96307 Query: 554 gccag 558 ||||| Sbjct: 96308 gccag 96312
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119329 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119328 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 119269 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119268 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119209 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119208 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119149 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119148 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119089 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119088 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 119029 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119028 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118969 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118968 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118909 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118908 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118849 Query: 554 gccag 558 ||||| Sbjct: 118848 gccag 118844 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95827 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95828 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 95887 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95947 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96007 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96067 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96127 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96187 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96247 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96248 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 96307 Query: 554 gccag 558 ||||| Sbjct: 96308 gccag 96312
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119337 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119278 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119277 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 119218 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119217 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119158 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119157 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119098 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119097 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119038 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119037 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118978 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118977 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118918 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118917 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118858 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118857 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118798 Query: 554 gccag 558 ||||| Sbjct: 118797 gccag 118793 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95772 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95773 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 95832 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95833 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95892 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95893 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95952 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95953 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96012 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96013 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96072 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96073 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96132 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96133 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96192 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96193 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 96252 Query: 554 gccag 558 ||||| Sbjct: 96253 gccag 96257
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508346 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 31508405 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31508406 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 31508465 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508466 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 31508525 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508526 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 31508585 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508586 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 31508645 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508646 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 31508705 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508706 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 31508765 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508766 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 31508825 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508826 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 31508885 Query: 554 gccag 558 ||||| Sbjct: 31508886 gccag 31508890 Score = 210 bits (106), Expect = 4e-51 Identities = 106/106 (100%) Strand = Plus / Minus Query: 453 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 513 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 11513212 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 469 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 528 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 529 taaaggaggtggggg 543 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatcaccagctaaggccc 509 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 425 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84250 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 84191 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 84190 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 84131 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84130 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 84071 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84070 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 84011 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84010 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 83951 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83950 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 83891 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83890 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 83831 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83830 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 83771 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83770 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 83711 Query: 554 gccag 558 ||||| Sbjct: 83710 gccag 83706
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119298 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119297 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 119238 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119237 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119178 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119118 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119117 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119058 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118998 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118938 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118878 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118877 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118818 Query: 554 gccag 558 ||||| Sbjct: 118817 gccag 118813 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95761 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95820 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95821 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 95880 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95881 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95940 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95941 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 96000 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96001 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96060 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96061 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96120 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96121 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96180 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96181 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96240 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96241 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 96300 Query: 554 gccag 558 ||||| Sbjct: 96301 gccag 96305
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14535 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 14594 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14595 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 14654 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14655 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 14714 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14715 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 14774 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14775 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 14834 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14835 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 14894 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14895 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 14954 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14955 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 15014 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15015 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 15074 Query: 554 gccag 558 ||||| Sbjct: 15075 gccag 15079 Score = 1049 bits (529), Expect = 0.0 Identities = 542/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122810 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 122869 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122870 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 122929 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 122930 gggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaag 122988 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122989 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 123048 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123049 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 123108 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123109 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 123168 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123169 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 123228 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123229 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 123288 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123289 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 123348 Query: 554 gccag 558 ||||| Sbjct: 123349 gccag 123353
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141343 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 141402 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141403 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 141462 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141463 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 141522 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141523 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 141582 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141583 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 141642 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141643 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 141702 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141703 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 141762 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141763 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 141822 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141823 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 141882 Query: 554 gccag 558 ||||| Sbjct: 141883 gccag 141887
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93939 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 93998 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 93999 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 94058 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94059 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 94118 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94119 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 94178 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94179 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 94238 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94239 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 94298 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94299 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 94358 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94359 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 94418 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94419 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 94478 Query: 554 gccag 558 ||||| Sbjct: 94479 gccag 94483
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58076 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 58017 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 58016 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 57957 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57956 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 57897 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57896 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 57837 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57836 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 57777 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57776 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 57717 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57716 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 57657 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57656 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 57597 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57596 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 57537 Query: 554 gccag 558 ||||| Sbjct: 57536 gccag 57532
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28003 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 28062 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 28063 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 28122 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28123 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 28182 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28183 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 28242 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28243 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 28302 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28303 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 28362 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28363 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 28422 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28423 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 28482 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28483 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 28542 Query: 554 gccag 558 ||||| Sbjct: 28543 gccag 28547
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268695 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 9268754 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9268755 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 9268814 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268815 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9268874 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268875 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9268934 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268935 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9268994 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268995 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9269054 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269055 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9269114 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269115 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9269174 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269175 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 9269234 Query: 554 gccag 558 ||||| Sbjct: 9269235 gccag 9269239 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056609 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 9056668 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9056669 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 9056728 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056729 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9056788 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056789 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9056848 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056849 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9056908 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056909 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9056968 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056969 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9057028 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057029 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9057088 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057089 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 9057148 Query: 554 gccag 558 ||||| Sbjct: 9057149 gccag 9057153 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228195 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 9228254 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9228255 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 9228314 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9228315 gggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaag 9228374 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228375 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9228434 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228435 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9228494 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228495 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9228554 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228555 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9228614 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228615 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9228674 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228675 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 9228734 Query: 554 gccag 558 ||||| Sbjct: 9228735 gccag 9228739 Score = 1049 bits (529), Expect = 0.0 Identities = 542/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164784 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 9164843 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9164844 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 9164903 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 9164904 gggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaag 9164962 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164963 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 9165022 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165023 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9165082 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165083 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9165142 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165143 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9165202 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165203 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9165262 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165263 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 9165322 Query: 554 gccag 558 ||||| Sbjct: 9165323 gccag 9165327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938680 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 19938739 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19938740 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 19938799 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938800 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 19938859 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938860 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 19938919 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938920 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 19938979 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938980 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 19939039 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939040 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 19939099 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939100 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 19939159 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939160 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 19939219 Query: 554 gccag 558 ||||| Sbjct: 19939220 gccag 19939224 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387547 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 10387606 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10387607 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 10387666 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387667 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10387726 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387727 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10387786 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387787 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10387846 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387847 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10387906 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387907 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10387966 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387967 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10388026 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388027 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 10388086 Query: 554 gccag 558 ||||| Sbjct: 10388087 gccag 10388091 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276751 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 10276692 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10276691 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 10276632 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276631 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10276572 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276571 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10276512 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276511 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10276452 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276451 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10276392 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276391 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10276332 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276331 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10276272 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276271 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 10276212 Query: 554 gccag 558 ||||| Sbjct: 10276211 gccag 10276207 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 378 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 437 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 438 tcggccagtgagacgatgggggataagcttcatcgtcgagag 479 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598862 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 31598921 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31598922 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 31598981 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598982 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 31599041 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599042 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 31599101 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599102 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 31599161 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599162 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 31599221 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599222 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 31599281 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599282 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 31599341 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599342 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 31599401 Query: 554 gccag 558 ||||| Sbjct: 31599402 gccag 31599406 Score = 210 bits (106), Expect = 4e-51 Identities = 106/106 (100%) Strand = Plus / Minus Query: 453 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 513 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 11509975 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 469 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 528 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 529 taaaggaggtggggg 543 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatcaccagctaaggccc 509 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 425 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526178 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 33526237 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 33526238 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 33526297 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526298 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 33526357 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526358 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 33526417 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526418 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 33526477 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526478 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 33526537 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526538 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 33526597 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526598 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 33526657 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526658 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 33526717 Query: 554 gccag 558 ||||| Sbjct: 33526718 gccag 33526722 Score = 200 bits (101), Expect = 3e-48 Identities = 101/101 (100%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678026 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 16677967 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgta 114 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677966 gcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 462 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 521 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 522 tcagtgataaaggaggtgggggtgcaaagac 552 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 62 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744711 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47363 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 47304 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 47303 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 47244 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47243 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 47184 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47183 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 47124 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47123 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 47064 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47063 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 47004 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47003 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 46944 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46943 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 46884 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46883 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 46824 Query: 554 gccag 558 ||||| Sbjct: 46823 gccag 46819
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71375 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 71434 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 71435 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 71494 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71495 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 71554 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71555 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 71614 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71615 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 71674 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71675 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 71734 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71735 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 71794 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71795 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 71854 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71855 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 71914 Query: 554 gccag 558 ||||| Sbjct: 71915 gccag 71919
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 206 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 207 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 266 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 326 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 386 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 446 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 506 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 566 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 626 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 686 Query: 554 gccag 558 ||||| Sbjct: 687 gccag 691
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 402 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 461 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 521 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 581 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 641 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 701 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 761 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 821 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 881 Query: 554 gccag 558 ||||| Sbjct: 882 gccag 886
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 272 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 273 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 332 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 392 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 452 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 512 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 572 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 632 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 692 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 752 Query: 554 gccag 558 ||||| Sbjct: 753 gccag 757
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 403 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 404 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 463 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 523 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 583 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 643 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 703 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 763 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 823 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 883 Query: 554 gccag 558 ||||| Sbjct: 884 gccag 888
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 222 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 223 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 282 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 342 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 402 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 462 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 522 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 582 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 642 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 702 Query: 554 gccag 558 ||||| Sbjct: 703 gccag 707
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 402 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 461 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 521 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 581 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 641 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 701 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 761 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 821 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 881 Query: 554 gccag 558 ||||| Sbjct: 882 gccag 886
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 403 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 404 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 463 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 523 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 583 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 643 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 703 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 763 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 823 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 883 Query: 554 gccag 558 ||||| Sbjct: 884 gccag 888
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949956 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 19950015 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19950016 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 19950075 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950076 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 19950135 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950136 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 19950195 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950196 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 19950255 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950256 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 19950315 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950316 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 19950375 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950376 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 19950435 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950436 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 19950495 Query: 554 gccag 558 ||||| Sbjct: 19950496 gccag 19950500 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393586 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 10393645 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10393646 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 10393705 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393706 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10393765 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393766 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10393825 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393826 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10393885 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393886 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10393945 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393946 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10394005 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394006 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10394065 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394066 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 10394125 Query: 554 gccag 558 ||||| Sbjct: 10394126 gccag 10394130 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282790 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 10282731 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10282730 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 10282671 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282670 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 10282611 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282610 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 10282551 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282550 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 10282491 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282490 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 10282431 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282430 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 10282371 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282370 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 10282311 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282310 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 10282251 Query: 554 gccag 558 ||||| Sbjct: 10282250 gccag 10282246 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 378 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 437 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 438 tcggccagtgagacgatgggggataagcttcatcgtcgagag 479 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 119272 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119271 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 119212 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 119152 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119151 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 119092 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 119032 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 118972 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 118912 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 118852 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118851 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 118792 Query: 554 gccag 558 ||||| Sbjct: 118791 gccag 118787 Score = 1072 bits (541), Expect = 0.0 Identities = 544/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 95767 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95768 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 95827 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95828 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 95887 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 95947 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 96007 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 96067 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 96127 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 96187 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 96247 Query: 554 gccag 558 ||||| Sbjct: 96248 gccag 96252
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20770 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 20829 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 20830 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 20889 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20890 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 20949 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20950 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 21009 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21010 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 21069 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21070 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 21129 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21130 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 21189 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21190 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 21249 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21250 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 21309 Query: 554 gccag 558 ||||| Sbjct: 21310 gccag 21314 Score = 1027 bits (518), Expect = 0.0 Identities = 540/546 (98%), Gaps = 1/546 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44348 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 44289 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||| Sbjct: 44288 gcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcata 44229 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44228 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 44169 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44168 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 44109 Query: 254 gtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgt 312 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 44108 gtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgt 44049 Query: 313 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44048 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 43989 Query: 373 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43988 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 43929 Query: 433 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43928 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 43869 Query: 493 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43868 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 43809 Query: 553 agccag 558 |||||| Sbjct: 43808 agccag 43803
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 918 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 917 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 858 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 798 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 738 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 678 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 618 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 558 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 498 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 438 Query: 554 gccag 558 ||||| Sbjct: 437 gccag 433
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123187 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 123128 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 123127 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 123068 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123067 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 123008 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123007 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 122948 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122947 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 122888 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 122828 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122827 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 122768 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122767 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 122708 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122707 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 122648 Query: 554 gccag 558 ||||| Sbjct: 122647 gccag 122643 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99650 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 99709 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 99710 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 99769 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99770 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 99829 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99830 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 99889 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99890 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 99949 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99950 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 100009 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100010 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100069 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100070 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100129 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100130 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 100189 Query: 554 gccag 558 ||||| Sbjct: 100190 gccag 100194
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123904 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 123845 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 123844 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 123785 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123784 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 123725 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123724 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 123665 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123664 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 123605 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123604 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 123545 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123544 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 123485 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123484 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 123425 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123424 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 123365 Query: 554 gccag 558 ||||| Sbjct: 123364 gccag 123360 Score = 1065 bits (537), Expect = 0.0 Identities = 543/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100327 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 100386 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 100387 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 100446 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100447 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 100506 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100507 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 100566 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100567 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 100626 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100627 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 100686 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100687 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100746 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100747 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100806 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100807 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 100866 Query: 554 gccag 558 ||||| Sbjct: 100867 gccag 100871
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241586 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatag 9241527 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9241526 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 9241467 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241466 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 9241407 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241406 cttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagtt 9241347 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241346 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 9241287 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241286 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 9241227 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241226 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 9241167 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241166 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 9241107 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241106 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 9241047 Query: 554 gccag 558 ||||| Sbjct: 9241046 gccag 9241042 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 343 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 402 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 403 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 462 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 463 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 508 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 497 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 543 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 496 accagctaaggcccctaaatgaccgctcagtgataaagga 535 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52799 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatag 52740 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 52739 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 52680 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52679 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 52620 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52619 cttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagtt 52560 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52559 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 52500 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52499 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 52440 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52439 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 52380 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52379 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 52320 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52319 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 52260 Query: 554 gccag 558 ||||| Sbjct: 52259 gccag 52255
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1057 bits (533), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 400 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 401 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 460 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 520 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 cttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 580 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 640 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 700 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 760 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 820 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 821 tcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagaca 880 Query: 554 gccag 558 ||||| Sbjct: 881 gccag 885
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1039 bits (524), Expect = 0.0 Identities = 540/544 (99%), Gaps = 1/544 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123127 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 123068 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 123067 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 123008 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123007 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 122948 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122947 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 122888 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 122828 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122827 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 122769 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122768 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 122709 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122708 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 122649 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122648 tcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 122589 Query: 554 gcca 557 |||| Sbjct: 122588 gcca 122585 Score = 1039 bits (524), Expect = 0.0 Identities = 540/544 (99%), Gaps = 1/544 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99610 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 99669 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 99670 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 99729 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99730 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 99789 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99790 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 99849 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99850 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 99909 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99910 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 99968 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99969 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 100028 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100029 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 100088 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100089 tcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 100148 Query: 554 gcca 557 |||| Sbjct: 100149 gcca 100152
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1039 bits (524), Expect = 0.0 Identities = 540/544 (99%), Gaps = 1/544 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5963 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 6022 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 6023 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 6082 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6083 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 6142 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6143 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 6202 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6203 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 6262 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6263 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 6321 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6322 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 6381 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6382 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 6441 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6442 tcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 6501 Query: 554 gcca 557 |||| Sbjct: 6502 gcca 6505
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1039 bits (524), Expect = 0.0 Identities = 540/544 (99%), Gaps = 1/544 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 610 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 611 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 670 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 730 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 790 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 850 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 851 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcg 909 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 969 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 1029 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 tcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 1089 Query: 554 gcca 557 |||| Sbjct: 1090 gcca 1093
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1037 bits (523), Expect = 0.0 Identities = 529/531 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 513 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 514 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 573 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 633 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 693 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 753 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 813 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 873 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 933 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 544 ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 934 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1003 bits (506), Expect = 0.0 Identities = 509/510 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 398 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 399 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 458 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 518 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 578 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 638 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 698 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 758 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 818 Query: 494 tcaccagctaaggcccctaaatgaccgctc 523 |||||||||||||||||||||||||||||| Sbjct: 819 tcaccagctaaggcccctaaatgaccgctc 848
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 999 bits (504), Expect = 0.0 Identities = 507/508 (99%) Strand = Plus / Plus Query: 51 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 111 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 170 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 171 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 231 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 291 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 351 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 411 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 471 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 531 aaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacagccag 509
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 997 bits (503), Expect = 0.0 Identities = 506/507 (99%) Strand = Plus / Plus Query: 52 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 112 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 171 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 172 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 232 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 292 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 352 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 412 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 472 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 532 aggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacagccag 507
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 983 bits (496), Expect = 0.0 Identities = 535/547 (97%), Gaps = 2/547 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122669 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcatag 122610 Query: 74 gcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 131 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122609 gcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttca 122550 Query: 132 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122549 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 122490 Query: 192 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 251 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122489 agcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgag 122430 Query: 252 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122429 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 122370 Query: 312 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122369 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 122310 Query: 372 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 431 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122309 cgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggat 122250 Query: 432 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 491 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122249 tcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctg 122190 Query: 492 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 551 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122189 gatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaaga 122130 Query: 552 cagccag 558 ||||||| Sbjct: 122129 cagccag 122123
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 983 bits (496), Expect = 0.0 Identities = 535/547 (97%), Gaps = 2/547 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12825210 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcatag 12825151 Query: 74 gcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 131 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12825150 gcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttca 12825091 Query: 132 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825090 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 12825031 Query: 192 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 251 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825030 agcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgag 12824971 Query: 252 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824970 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 12824911 Query: 312 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824910 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 12824851 Query: 372 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 431 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12824850 cgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggat 12824791 Query: 432 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 491 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12824790 tcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctg 12824731 Query: 492 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 551 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12824730 gatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaaga 12824671 Query: 552 cagccag 558 ||||||| Sbjct: 12824670 cagccag 12824664
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 975 bits (492), Expect = 0.0 Identities = 495/496 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 606 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 607 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 666 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 726 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 786 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 846 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 906 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 966 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 1026 Query: 494 tcaccagctaaggccc 509 |||||||||||||||| Sbjct: 1027 tcaccagctaaggccc 1042
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 930 bits (469), Expect = 0.0 Identities = 526/545 (96%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141563 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 141504 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 141503 gcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcata 141449 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141448 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 141389 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141388 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 141329 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141328 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 141269 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 141268 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 141209 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141208 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggta 141149 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141148 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 141089 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 141088 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 141029 Query: 554 gccag 558 ||||| Sbjct: 141028 gccag 141024 Score = 930 bits (469), Expect = 0.0 Identities = 526/545 (96%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112094 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 112153 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 112154 gcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcata 112208 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112209 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 112268 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112269 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 112328 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112329 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 112388 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 112389 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 112448 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112449 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggta 112508 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112509 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 112568 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 112569 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 112628 Query: 554 gccag 558 ||||| Sbjct: 112629 gccag 112633
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 930 bits (469), Expect = 0.0 Identities = 527/545 (96%), Gaps = 6/545 (1%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133678 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 133619 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 133618 gcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcata 133564 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133563 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 133504 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133503 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 133444 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133443 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 133384 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 133383 gaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgag 133324 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 133323 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtc 133265 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133264 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 133205 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 133204 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 133145 Query: 554 gccag 558 ||||| Sbjct: 133144 gccag 133140 Score = 930 bits (469), Expect = 0.0 Identities = 527/545 (96%), Gaps = 6/545 (1%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104293 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 104352 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 104353 gcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcata 104407 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104408 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 104467 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104468 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 104527 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104528 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 104587 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 104588 gaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgag 104647 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104648 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtc 104706 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104707 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 104766 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 104767 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 104826 Query: 554 gccag 558 ||||| Sbjct: 104827 gccag 104831
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 130584 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 104051
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 1084
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 138421 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 110676
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 131692 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 105186
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 135855 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 107702
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccag 141796 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccag 111532
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134463 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106573
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 135509 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106916
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134598 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106745
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134596 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106742
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134508 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106620
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 131685 Score = 912 bits (460), Expect = 0.0 Identities = 511/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 105184
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 908 bits (458), Expect = 0.0 Identities = 509/526 (96%), Gaps = 5/526 (0%) Strand = Plus / Minus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 93 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 152 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 153 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 212 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 213 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 273 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 333 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 393 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 453 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 513 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 130708 Score = 908 bits (458), Expect = 0.0 Identities = 509/526 (96%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 93 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 152 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 153 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 212 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 213 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 273 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 333 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 393 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 453 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 513 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 102737
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 135217 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 107413
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134818 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 107088
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 2607
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 904 bits (456), Expect = 0.0 Identities = 523/545 (95%), Gaps = 9/545 (1%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127319 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 127260 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 127259 gcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcata 127205 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127204 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 127145 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 127144 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 127085 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127084 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 127025 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 127024 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 126965 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 126964 agcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggtc 126909 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126908 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 126849 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 126848 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 126789 Query: 554 gccag 558 ||||| Sbjct: 126788 gccag 126784 Score = 904 bits (456), Expect = 0.0 Identities = 523/545 (95%), Gaps = 9/545 (1%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107603 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 107662 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 107663 gcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcata 107717 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107718 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 107777 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107778 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 107837 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107838 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 107897 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107898 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 107957 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 107958 agcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggtc 108013 Query: 434 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108014 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 108073 Query: 494 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 108074 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagaca 108133 Query: 554 gccag 558 ||||| Sbjct: 108134 gccag 108138
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 135097 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 107310
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 135215 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 107411
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 134946 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 107192
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 138626 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 110673
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 904 bits (456), Expect = 0.0 Identities = 510/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccag 1180
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 900 bits (454), Expect = 0.0 Identities = 526/550 (95%), Gaps = 10/550 (1%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139041 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 138982 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 138981 gcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcata 138927 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138926 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 138867 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138866 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 138807 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138806 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 138747 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138746 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 138687 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacag 428 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138686 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacag 138627 Query: 429 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138626 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 138567 Query: 489 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 548 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138566 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 138507 Query: 549 agacagccag 558 |||||||||| Sbjct: 138506 agacagccag 138497 Score = 900 bits (454), Expect = 0.0 Identities = 526/550 (95%), Gaps = 10/550 (1%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110904 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 110963 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 110964 gcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcata 111018 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111019 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 111078 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111079 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 111138 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111139 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 111198 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 111199 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 111258 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacag 428 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111259 agcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacag 111318 Query: 429 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111319 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 111378 Query: 489 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 548 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111379 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 111438 Query: 549 agacagccag 558 |||||||||| Sbjct: 111439 agacagccag 111448
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 896 bits (452), Expect = 0.0 Identities = 509/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 134475 Score = 896 bits (452), Expect = 0.0 Identities = 509/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106587
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 888 bits (448), Expect = 0.0 Identities = 508/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 1082
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 888 bits (448), Expect = 0.0 Identities = 508/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 131915 Score = 888 bits (448), Expect = 0.0 Identities = 508/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 104849
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 888 bits (448), Expect = 0.0 Identities = 508/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 132876 Score = 888 bits (448), Expect = 0.0 Identities = 508/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 105773
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 882 bits (445), Expect = 0.0 Identities = 509/529 (96%), Gaps = 6/529 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 451 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 510 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 1579
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 880 bits (444), Expect = 0.0 Identities = 507/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 1089
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 880 bits (444), Expect = 0.0 Identities = 507/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccag 130784 Score = 880 bits (444), Expect = 0.0 Identities = 507/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccag 104610
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 878 bits (443), Expect = 0.0 Identities = 506/527 (96%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 557 |||||||||||||| ||||||||||||| |||||||| ||||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggtaggggtgcacagacagcca 1090
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 872 bits (440), Expect = 0.0 Identities = 507/530 (95%), Gaps = 12/530 (2%) Strand = Plus / Minus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 329 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 388 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 389 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 448 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 133908 Score = 872 bits (440), Expect = 0.0 Identities = 507/530 (95%), Gaps = 12/530 (2%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 329 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 388 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 389 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 448 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 106374
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 868 bits (438), Expect = 0.0 Identities = 510/530 (96%), Gaps = 8/530 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 211 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 270 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 329 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 388 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 389 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 448 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 2852
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 864 bits (436), Expect = 0.0 Identities = 505/528 (95%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 129447 Score = 864 bits (436), Expect = 0.0 Identities = 505/528 (95%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 103009
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 846 bits (427), Expect = 0.0 Identities = 504/528 (95%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 1103
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 844 bits (426), Expect = 0.0 Identities = 432/434 (99%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 375 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 374 gcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcata 315 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 255 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 195 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 135 Query: 314 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 75 Query: 374 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 15 Query: 434 aaggtcggccagtg 447 |||||||||||||| Sbjct: 14 aaggtcggccagtg 1
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 844 bits (426), Expect = 0.0 Identities = 502/528 (95%), Gaps = 12/528 (2%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 561
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 844 bits (426), Expect = 0.0 Identities = 502/528 (95%), Gaps = 12/528 (2%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 139284 Score = 844 bits (426), Expect = 0.0 Identities = 502/528 (95%), Gaps = 12/528 (2%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 110776
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 837 bits (422), Expect = 0.0 Identities = 501/528 (94%), Gaps = 12/528 (2%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 577
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 837 bits (422), Expect = 0.0 Identities = 476/494 (96%), Gaps = 5/494 (1%) Strand = Plus / Plus Query: 65 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 124 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 125 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 184 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 185 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 244 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 245 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 305 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 365 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 424 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 425 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 484 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 485 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 545 gcaaagacagccag 558 |||||||||||||| Sbjct: 1067 gcaaagacagccag 1080
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 835 bits (421), Expect = 0.0 Identities = 504/529 (95%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 391 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 449 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 510 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccag 177927 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 aggcccctaaatgaccgctcag 525 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 833 bits (420), Expect = 0.0 Identities = 503/528 (95%), Gaps = 7/528 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 91 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 149 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 330 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 390 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 449 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 510 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 557 ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagcca 1102
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 831 bits (419), Expect = 0.0 Identities = 501/527 (95%), Gaps = 6/527 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 557 |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1101
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 819 bits (413), Expect = 0.0 Identities = 501/529 (94%), Gaps = 6/529 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 391 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 449 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 510 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||| ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccag 1083
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 817 bits (412), Expect = 0.0 Identities = 498/527 (94%), Gaps = 11/527 (2%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 557 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacagcca 1096
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 815 bits (411), Expect = 0.0 Identities = 450/463 (97%) Strand = Plus / Plus Query: 96 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 155 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 156 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 215 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 216 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 276 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 336 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 395 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 396 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 455 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 456 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 516 gaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagccag 1064
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 813 bits (410), Expect = 0.0 Identities = 502/530 (94%), Gaps = 7/530 (1%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 391 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 449 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 510 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccag 558 |||| ||| ||||||||||||||||||| | |||||||| |||||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccag 51601 Score = 813 bits (410), Expect = 0.0 Identities = 502/530 (94%), Gaps = 7/530 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 391 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 449 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 510 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccag 558 |||| ||| ||||||||||||||||||| | |||||||| |||||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccag 38227
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 813 bits (410), Expect = 0.0 Identities = 502/530 (94%), Gaps = 7/530 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 391 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 449 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 450 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 510 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccag 558 |||| ||| ||||||||||||||||||| | |||||||| |||||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccag 5155
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 793 bits (400), Expect = 0.0 Identities = 501/532 (94%), Gaps = 7/532 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 388 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 446 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccag 1087
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 761 bits (384), Expect = 0.0 Identities = 497/532 (93%), Gaps = 7/532 (1%) Strand = Plus / Minus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 388 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 446 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||| |||| |||||||||| || |||||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccag 117062 Score = 761 bits (384), Expect = 0.0 Identities = 497/532 (93%), Gaps = 7/532 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 388 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 446 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||| |||| |||||||||| || |||||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccag 91040
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 757 bits (382), Expect = 0.0 Identities = 497/532 (93%), Gaps = 10/532 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 328 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 446 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||| ||||| || | |||||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccag 87345
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 753 bits (380), Expect = 0.0 Identities = 467/492 (94%), Gaps = 8/492 (1%) Strand = Plus / Plus Query: 71 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 129 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 130 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 187 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 188 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 247 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 248 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 307 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 367 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 426 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 427 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 486 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 487 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 546 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 547 aaagacagccag 558 | |||||||||| Sbjct: 1089 agagacagccag 1100
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 747 bits (377), Expect = 0.0 Identities = 501/538 (93%), Gaps = 12/538 (2%) Strand = Plus / Minus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 145999 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 145940 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 145939 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 145885 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145884 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 145825 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 145824 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 145765 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145764 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 145705 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145704 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 145645 Query: 387 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 440 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 145644 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 145585 Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 145584 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 145525 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||| Sbjct: 145524 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccag 145467 Score = 747 bits (377), Expect = 0.0 Identities = 501/538 (93%), Gaps = 12/538 (2%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 112463 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 112522 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 112523 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 112577 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112578 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112637 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112638 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 112697 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112698 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112757 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112758 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 112817 Query: 387 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 440 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 112818 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 112877 Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112878 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 112937 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||| Sbjct: 112938 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccag 112995
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 451 cgatgggggataagctt 467 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 747 bits (377), Expect = 0.0 Identities = 496/533 (93%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 560 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtt 619 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||| || ||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 620 aaggggac-----ccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcact 674 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 675 acttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaacta 734 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 735 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 794 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 854 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 914 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccag 445 |||||||||||||||||||||||||||| | |||||| |||| | | |||| |||| Sbjct: 915 cgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccag 974 Query: 446 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 505 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 975 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1034 Query: 506 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 1035 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccag 1087
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 91 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 149 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 330 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 389 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 390 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 449 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 450 acgatgggggataagcttcatcgtcgagagg 480 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 475 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 534 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 535 aggtgggggtgcaaagacagcca 557 |||| |||||||| ||||||||| Sbjct: 129287 aggtaggggtgcagagacagcca 129265 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 731 bits (369), Expect = 0.0 Identities = 494/532 (92%), Gaps = 9/532 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 328 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 446 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||| ||||| || | |||||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccag 89432
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 722 bits (364), Expect = 0.0 Identities = 491/532 (92%), Gaps = 6/532 (1%) Strand = Plus / Minus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 127881 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 127822 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 127821 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 127767 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 127766 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 127707 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127706 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 127647 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127646 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127587 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127586 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 127527 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 446 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 127526 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 127467 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 127466 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 127407 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||| |||||||| |||||||||| || |||||||||||||||| Sbjct: 127406 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccag 127355 Score = 722 bits (364), Expect = 0.0 Identities = 491/532 (92%), Gaps = 6/532 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 95566 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 95625 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95626 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 95680 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 95681 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 95740 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95741 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 95800 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95860 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95861 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 95920 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 446 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 95921 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 95980 Query: 447 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 506 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 95981 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 96040 Query: 507 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||| |||||||| |||||||||| || |||||||||||||||| Sbjct: 96041 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccag 96092
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 708 bits (357), Expect = 0.0 Identities = 491/533 (92%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 564 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 623 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| |||||||||||||||||||||| |||||| | |||| ||||||||| Sbjct: 624 aagggaac-----ccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcact 678 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 679 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 738 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 739 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 798 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 858 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 859 gactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 918 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccag 445 |||||||||||||||||||| |||| ||| | ||||| || | || | |||| |||| Sbjct: 919 cgaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaaccag 978 Query: 446 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 505 |||||| ||||||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 979 tgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaag 1038 Query: 506 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||| |||| |||||||||| || |||||||||||||||| Sbjct: 1039 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccag 1091
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 391 gcaaactctgaatactagatat 412 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 437 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 497 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 556 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 557 ag 558 || Sbjct: 5302 ag 5303
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 391 gcaaactctgaatactagatat 412 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Minus Query: 437 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 497 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 556 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 557 ag 558 || Sbjct: 22623 ag 22622
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 391 gcaaactctgaatactagatatgaccc 417 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 204 bits (103), Expect = 2e-49 Identities = 125/131 (95%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 429 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 487 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 488 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 548 aagacagccag 558 |||||||||| Sbjct: 5565 gagacagccag 5575
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 391 gcaaactctgaatactagatatgaccc 417 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 204 bits (103), Expect = 2e-49 Identities = 125/131 (95%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 429 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 487 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 488 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 548 aagacagccag 558 |||||||||| Sbjct: 5565 gagacagccag 5575
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 388 gaggcaaactctgaatactag 408 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 388 gaggcaaactctgaatactag 408 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Minus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 556 cag 558 ||| Sbjct: 115126 cag 115124 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 556 cag 558 ||| Sbjct: 86994 cag 86996
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 387 cgaggcaaactctgaatactagatatg 413 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 180 bits (91), Expect = 3e-42 Identities = 115/123 (93%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 556 cag 558 ||| Sbjct: 4978 cag 4980
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 387 cgaggcaaactctgaatactagatatg 413 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 180 bits (91), Expect = 3e-42 Identities = 115/123 (93%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 556 cag 558 ||| Sbjct: 1088 cag 1090
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 387 cgaggcaaactctgaatactagatatg 413 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 387 cgaggcaaactctgaatactagatatg 413 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 180 bits (91), Expect = 3e-42 Identities = 115/123 (93%) Strand = Plus / Minus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 556 cag 558 ||| Sbjct: 150157 cag 150155 Score = 180 bits (91), Expect = 3e-42 Identities = 115/123 (93%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 556 cag 558 ||| Sbjct: 118509 cag 118511
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 387 cgaggcaaactctgaatactagatatg 413 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 180 bits (91), Expect = 3e-42 Identities = 115/123 (93%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 556 cag 558 ||| Sbjct: 1088 cag 1090
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 599 bits (302), Expect = e-168 Identities = 476/530 (89%), Gaps = 8/530 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| ||| ||||||||||| |||||||| ||||| |||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccag 1089
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 597 bits (301), Expect = e-167 Identities = 476/532 (89%), Gaps = 8/532 (1%) Strand = Plus / Minus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 138708 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 138649 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 138648 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 138594 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138593 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 138534 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 138533 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 138474 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138473 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 138414 Query: 328 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 138413 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 138354 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 444 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 138353 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 138294 Query: 445 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 504 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 138293 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 138234 Query: 505 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 556 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 138233 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 138182 Score = 597 bits (301), Expect = e-167 Identities = 476/532 (89%), Gaps = 8/532 (1%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 83169 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 83228 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 83229 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 83283 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 83284 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 83343 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 83344 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 83403 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 83404 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 83463 Query: 328 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 83464 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 83523 Query: 387 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 444 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 83524 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 83583 Query: 445 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 504 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 83584 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 83643 Query: 505 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 556 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 83644 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 83695
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 591 bits (298), Expect = e-165 Identities = 365/385 (94%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 28 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 87 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 543 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 602 Query: 88 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||||||| | | ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 603 aagggaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcact 660 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 661 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 720 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 721 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 780 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 781 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagtt 840 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 841 gactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 900 Query: 387 cgaggcaaactctgaatactagata 411 |||||||||||||||||||| |||| Sbjct: 901 cgaggcaaactctgaatactggata 925 Score = 168 bits (85), Expect = 1e-38 Identities = 109/117 (93%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccag 1071
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 379 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgg 365 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 16 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75094 Query: 76 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 135 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 75093 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 75034 Query: 136 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75033 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 74974 Query: 196 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74973 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 74914 Query: 256 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74913 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Plus Query: 16 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 382444 Query: 76 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 135 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 382445 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 382504 Query: 136 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382505 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 382564 Query: 196 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382565 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 382624 Query: 256 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382625 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 16 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 113185 Query: 76 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 135 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 113184 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 113125 Query: 136 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113124 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 113065 Query: 196 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113064 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 113005 Query: 256 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113004 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 16 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 367867 Query: 76 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 135 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 367866 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 367807 Query: 136 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367806 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 367747 Query: 196 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367746 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 367687 Query: 256 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367686 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 16 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 184472 Query: 76 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 135 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 184471 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 184412 Query: 136 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184411 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 184352 Query: 196 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184351 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184292 Query: 256 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184291 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 gtcgagagggaaacagcccggatc 495 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 527 bits (266), Expect = e-146 Identities = 368/398 (92%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 144465 tgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtag 144524 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 || ||||| ||||||||| | ||||| |||||||||||||||||||||||||| | Sbjct: 144525 gcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctg 144582 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144583 gggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaag 144642 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 144643 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 144702 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144703 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 144762 Query: 314 gaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgc 372 |||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||| Sbjct: 144763 gaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcga 144822 Query: 373 gagcggtaccaaatcgaggcaaactctgaatactagat 410 |||||||||||||||||||||||||||||||||||||| Sbjct: 144823 gagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 527 bits (266), Expect = e-146 Identities = 368/398 (92%), Gaps = 3/398 (0%) Strand = Plus / Minus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 88386 tgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtag 88327 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 || ||||| ||||||||| | ||||| |||||||||||||||||||||||||| | Sbjct: 88326 gcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctg 88269 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 193 |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88268 gggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaag 88209 Query: 194 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 253 ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 88208 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtt 88149 Query: 254 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88148 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 88089 Query: 314 gaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgc 372 |||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||| Sbjct: 88088 gaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcga 88029 Query: 373 gagcggtaccaaatcgaggcaaactctgaatactagat 410 |||||||||||||||||||||||||||||||||||||| Sbjct: 88028 gagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 176 bits (89), Expect = 5e-41 Identities = 110/117 (94%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccag 145015 Score = 176 bits (89), Expect = 5e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccag 87836
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 521 bits (263), Expect = e-145 Identities = 359/387 (92%), Gaps = 8/387 (2%) Strand = Plus / Minus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||| || |||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 agggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 149 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 328 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 387 cgaggcaaactctgaatactagatatg 413 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607 Score = 149 bits (75), Expect = 1e-32 Identities = 111/123 (90%) Strand = Plus / Minus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 556 cag 558 ||| Sbjct: 5482 cag 5480
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 490 bits (247), Expect = e-135 Identities = 344/375 (91%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 184 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 243 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 244 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 303 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 304 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 363 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 364 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 423 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 424 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 483 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 484 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 543 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 544 tgcaaagacagccag 558 ||||||||||||||| Sbjct: 2752 tgcaaagacagccag 2738 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 151 tatggacccgaacct 165 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 316 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 620 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 674 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 675 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 734 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 794 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 795 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 854 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 914 Query: 388 gaggcaaactctgaatactag 408 ||||||||||||||||||||| Sbjct: 915 gaggcaaactctgaatactag 935 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 556 cag 558 ||| Sbjct: 1066 cag 1068
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 573 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 632 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 633 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 687 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 688 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 747 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 748 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 807 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 808 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 867 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 868 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 927 Query: 388 gaggcaaactctgaatactag 408 ||||||||||||||||||||| Sbjct: 928 gaggcaaactctgaatactag 948 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 556 cag 558 ||| Sbjct: 1079 cag 1081
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 480 bits (242), Expect = e-132 Identities = 350/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 677 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 736 Query: 89 agggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 147 ||| || ||| || |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 737 agg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcact 790 Query: 148 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 207 ||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 208 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 267 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 268 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 327 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 328 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 387 cgaggcaaactctgaatactag 408 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052 Score = 165 bits (83), Expect = 2e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 436 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 495 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 496 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 555 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 556 cag 558 ||| Sbjct: 1183 cag 1185
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 333 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 393 aaactctgaatactagatatg 413 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccag 1068
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 333 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 393 aaactctgaatactagatatg 413 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccag 4102
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 388 gaggcaaactctgaatactag 408 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccag 1070
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 391 gcaaactctgaatactagatatgac 415 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 172 bits (87), Expect = 8e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 440 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 499 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 500 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccag 1118
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 333 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 393 aaactctgaatactagatatg 413 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccag 1068
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 388 gaggcaaactctgaatactag 408 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 388 gaggcaaactctgaatactag 408 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccag 124195 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccag 95671
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 388 gaggcaaactctgaatact 406 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 504 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 388 gaggcaaactctgaatact 406 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 504 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 388 gaggcaaactctgaatact 406 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 504 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 447/519 (86%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 27 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 86 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 557 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 616 Query: 87 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 146 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 617 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 671 Query: 147 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 206 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 672 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 731 Query: 207 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 266 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 732 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 791 Query: 267 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 326 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 792 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 851 Query: 327 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 384 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 852 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 911 Query: 385 atcgaggcaaactctgaatactaga 409 ||||| ||||||||||||||||||| Sbjct: 912 atcgatgcaaactctgaatactaga 936 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccag 1068
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Minus Query: 27 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 86 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 115105 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 115046 Query: 87 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 146 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 115045 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 114991 Query: 147 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 206 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114990 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 114931 Query: 207 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 266 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 114930 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 114871 Query: 267 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 326 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 114870 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 114811 Query: 327 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 384 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114810 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 114751 Query: 385 atcgaggcaaactctgaatactaga 409 ||||| ||||||||||||||||||| Sbjct: 114750 atcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 27 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 86 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 86883 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 86942 Query: 87 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 146 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 86943 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 86997 Query: 147 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 206 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86998 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 87057 Query: 207 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 266 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 87058 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 87117 Query: 267 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 326 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 87118 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 87177 Query: 327 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 384 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87178 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 87237 Query: 385 atcgaggcaaactctgaatactaga 409 ||||| ||||||||||||||||||| Sbjct: 87238 atcgatgcaaactctgaatactaga 87262 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccag 114594 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccag 87394
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 388 gaggcaaactctgaatactagata 411 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 504 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 89 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 90 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 149 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 313 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 391 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 450 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 451 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 511 taaatgaccgctcagtgataaaggaggtgggggtgc 546 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 418 bits (211), Expect = e-114 Identities = 445/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 391 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 448 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 449 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 508 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 509 cctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 147 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 206 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 207 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 266 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 267 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 326 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 327 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 387 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 444 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 445 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 504 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 505 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 91 gg 92 || Sbjct: 602 gg 603
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 388 gaggcaaactctgaatactagatatga 414 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 443 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 502 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 503 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccag 1473
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 29 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 88 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 89 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 148 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 149 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 208 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 209 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 268 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 269 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 328 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 329 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 388 gaggcaaactctgaatactagatatg 413 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 443 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 502 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 503 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccag 1027
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 92 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 93 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 150 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 329 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 330 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 387 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 388 gaggcaaactctgaatactag 408 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 331 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 391 gcaaactctgaatactagatatgac 415 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 418 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 477 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 478 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 537 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 538 t 538 | Sbjct: 1064 t 1064
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 355 bits (179), Expect = 1e-94 Identities = 179/179 (100%) Strand = Plus / Minus Query: 380 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 440 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 500 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 341
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 347 bits (175), Expect = 2e-92 Identities = 178/179 (99%) Strand = Plus / Plus Query: 14 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 509 Query: 74 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 510 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcata 569 Query: 134 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 192 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 332 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 333 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 391 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 392 caaactctgaatactagat 410 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 161 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 162 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 221 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 222 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 281 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 282 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 337 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 338 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 397 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 398 ctgaatactag 408 ||||||||| Sbjct: 932 aagaatactag 942 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 103 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 162 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 341 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 342 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 401 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 402 atactagatatga 414 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccag 1032 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 92 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 150 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 331 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 389 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 390 ggcaaactctgaatacta 407 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 92 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 150 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 211 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 270 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 271 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 330 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 331 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 389 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 390 ggcaaactctgaatacta 407 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 501 ctaaggcccctaaat 515 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 501 ctaaggcccctaaat 515 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 319 bits (161), Expect = 5e-84 Identities = 161/161 (100%) Strand = Plus / Plus Query: 398 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 458 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 518 ccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccag 161
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 39 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 98 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 99 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 157 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 158 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 217 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 218 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 277 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 278 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 336 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 337 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 396 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 397 tctgaatacta 407 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 514 atgaccgctcagtgataaaggaggtgg 540 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 9e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 96 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 155 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 156 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 215 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 216 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 274 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 9e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 92 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 149 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 327 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 328 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 387 cgaggcaaactctgaatactag 408 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 212 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 271 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 272 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 331 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 332 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 391 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 392 caaactctgaatactagatat 412 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 139 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 198 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 199 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 258 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 259 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 318 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 319 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 375 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 376 cggtaccaaatcgaggcaaactctgaatactaga 409 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 502 taaggcccctaaatgaccgctcagtg 527 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 155 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 214 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 215 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 274 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 275 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 333 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 393 aaactctgaatactagatatgac 415 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 504 aggcccctaaatg 516 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgat 140 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 155 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 214 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 215 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 274 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 275 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 333 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 393 aaactctgaatactagatatgac 415 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 504 aggcccctaaatg 516 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgat 140 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 155 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 214 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 215 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 274 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 275 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 333 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 334 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 393 aaactctgaatactagatatgac 415 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 504 aggcccctaaatg 516 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgat 140 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 331 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 332 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 391 gcaaactctgaatacta 407 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 331 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 332 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 391 gcaaactctgaatacta 407 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 514 atgaccgctcagtgataaaggaggtg 539 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 514 atgaccgctcagtgataaaggaggtg 539 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 91 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 150 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 151 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 211 agaggtcc 218 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 105 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 164 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 165 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 224 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 225 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 284 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 285 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 344 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 345 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 404 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 405 ct 406 || Sbjct: 2489 ct 2490 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| |||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccag 2621 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 142 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 201 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 202 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 261 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 262 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 321 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 322 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 378 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 379 taccaaatcgaggcaaactctgaatactaga 409 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 89 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 161 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 162 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 221 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 222 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 281 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 282 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 340 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 401 aatactagata 411 ||||||||||| Sbjct: 921 aatactagata 931 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 161 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 162 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 221 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 222 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 281 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 282 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 340 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 401 aatactagata 411 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 163 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 164 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 223 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 224 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 283 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 284 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 342 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 343 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 402 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 403 tac 405 ||| Sbjct: 549 tac 551 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccag 683 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 41 gtgcctgttgaagaatgagccggcgactcatagg 74 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 167 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 168 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 227 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 228 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 287 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 288 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 344 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 345 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 404 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 405 ctaga 409 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 89 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 172 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 173 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 232 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 233 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 292 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 293 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 349 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 350 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 406 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 502 taaggcccctaaat 515 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 74 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 167 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 168 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 227 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 228 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 287 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 288 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 344 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 345 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 404 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 405 ctaga 409 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 31 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 89 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 117 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 176 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 177 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 236 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 237 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 296 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 297 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 355 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 356 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 117 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 176 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 177 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 236 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 237 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 296 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 297 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 355 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 356 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| |||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccag 189988 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| |||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccag 151415 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 40 cgtgcctgttgaagaatgagccggcgactcatag 73 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 40 cgtgcctgttgaagaatgagccggcgactcatag 73 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 331 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 332 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 390 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 391 gcaaactctgaatacta 407 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 514 atgaccgctcagtgataaaggaggtg 539 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 280 bits (141), Expect = 5e-72 Identities = 150/153 (98%) Strand = Plus / Plus Query: 406 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 465 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 466 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 525 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 526 tgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccag 19152982
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 280 bits (141), Expect = 5e-72 Identities = 150/153 (98%) Strand = Plus / Plus Query: 406 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 465 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 466 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 525 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 526 tgataaaggaggtgggggtgcaaagacagccag 558 |||||||||||||||||||||||||| |||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccag 76377
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 41 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 100 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 101 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 160 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 161 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 220 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 221 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 280 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 281 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 338 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 339 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 398 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 399 tgaatacta 407 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 7e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 331 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 332 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 391 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 392 caaactctgaatacta 407 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 504 aggcccctaaat 515 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 444 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 503 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 504 aggcccctaaat 515 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 329 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 330 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 387 cgaggcaaactctgaatact 406 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 329 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 330 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 386 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 387 cgaggcaaactctgaatact 406 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 93 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 94 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 153 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 154 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 213 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 214 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 273 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 274 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 319 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 341 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 399 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 400 gaatac 405 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 158 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 159 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 218 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 219 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 278 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 279 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 335 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 336 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 394 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 395 actctgaatactagata 411 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 476 agagggaaacagcccggatcaccagctaaggcccctaaatg 516 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 158 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 159 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 218 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 219 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 278 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 279 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 335 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 336 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 394 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 395 actctgaatactagata 411 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 476 agagggaaacagcccggatcaccagctaaggcccctaaatg 516 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 117 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 176 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 177 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 236 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 237 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 296 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 297 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 353 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 354 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 76 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 163 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 164 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 223 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 224 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 283 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 284 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 340 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 401 aatactag 408 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 163 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 164 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 223 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 224 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 283 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 284 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 340 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 401 aatactag 408 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 502 taaggcccctaaatg 516 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 502 taaggcccctaaatg 516 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 103 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 162 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 336 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 337 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 396 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 397 tctgaatact 406 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 438 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 497 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 498 cagctaaggcccctaaatgaccgctcagtgataaagga 535 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 92 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 149 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 150 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 209 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 210 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 269 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 270 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 329 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 330 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 388 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 389 aggcaaactctgaatacta 407 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 502 taaggcccctaaat 515 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 514 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 || | | || |||||||||||||||||| |||| ||||| |||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccag 2137725 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 514 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 || | | || |||||||||||||||||| |||| ||||| |||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccag 477135 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 117 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 176 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 177 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 236 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 237 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 296 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 297 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 353 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 354 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 76 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 92 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 151 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 152 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 211 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 212 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 271 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 272 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 323 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 443 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 502 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 503 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 108 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 165 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 286 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 342 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 343 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 401 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 402 atactagatatg 413 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 502 taaggcccctaaatg 516 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 92 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 44 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 103 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 162 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 341 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 342 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 401 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 402 atacta 407 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 44 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 103 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 162 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 341 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 342 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 401 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 402 atacta 407 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 158 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 159 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 218 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 219 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 278 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 279 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 335 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 336 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 394 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 395 actctgaatactagata 411 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 476 agagggaaacagcccggatcaccagctaaggcccctaaatg 516 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 39 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 98 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 99 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 158 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 159 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 218 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 219 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 278 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 279 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 338 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 339 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 397 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 398 ctgaatac 405 | |||||| Sbjct: 544 cagaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccag 683
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 294 ggttctccccgaaatgcgttgaggcgcagc 323 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| |||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccag 684 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 401 aatac 405 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcga 66 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 294 ggttctccccgaaatgcgttgaggcgcagc 323 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 539 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 401 aatac 405 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 162 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 340 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 341 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 399 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 400 gaatactagatatg 413 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 502 taaggcccctaaatg 516 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 82 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 74 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 74 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 74 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 212 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 271 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 272 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 331 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 332 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 388 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 389 aggcaaactctgaatactag 408 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 35 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 500 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 501 ctaaggcccctaaatga 517 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 141 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 196 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 162 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 340 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 341 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 399 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 400 gaatactagatatg 413 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 502 taaggcccctaaatg 516 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 82 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 103 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 162 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 163 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 222 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 223 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 282 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 283 cagagctagctggttctccccgaaatgcgttgaggcgcagc 323 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 139 bits (70), Expect = 1e-29 Identities = 106/118 (89%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccag 1061 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 336 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 395 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 396 ctctgaatactagata 411 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 160 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 161 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 220 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 221 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 280 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 281 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 337 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 338 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 396 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 397 tctgaatactagatatg 413 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 462 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 516 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 161 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 162 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 221 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 222 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 281 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 282 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 339 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 340 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 398 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 399 tgaatactagatat 412 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 91 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 476 agagggaaacagcccggatcaccagctaaggcccctaaatga 517 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 294 ggttctccccgaaatgcgttgaggcgcagcagttg 328 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 139 bits (70), Expect = 1e-29 Identities = 106/118 (89%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccag 686 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 401 aatac 405 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcga 66 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 163 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 164 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 223 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 224 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 283 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 284 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 341 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 342 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 401 aatac 405 ||||| Sbjct: 547 aatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 553 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 76 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 104 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 163 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 164 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 223 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 224 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 283 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 284 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 341 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 342 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 401 aatactagat 410 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 476 agagggaaacagcccggatcaccagctaaggcccctaaatg 516 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 514 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 || | | || |||||||||||||||||| |||| ||||| |||| Sbjct: 1775466 atcaacactaagtgataaaggaggtgggattgcatagacaaccag 1775422 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 514 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 || | | || |||||||||||||||||| |||| ||||| |||| Sbjct: 376603 atcaacactaagtgataaaggaggtgggattgcatagacaaccag 376647 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 514 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 || | | || |||||||| ||||||||| |||| ||||| |||| Sbjct: 3265 atcaacactaagtgataagggaggtgggattgcatagacaaccag 3309 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 294 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 350 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 351 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 442 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 501 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 502 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 547 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 514 atgaccgctcagtgataaaggaggtggg 541 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 tttcggtgcgggctgcgcgagcggtaccaaatcga 389 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 401 aatac 405 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 401 aatac 405 ||||| Sbjct: 1049320 aatac 1049316 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccag 1659560 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccag 1049184 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 286 agctagctggttctccccgaaatgcgttgaggcg 319 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 401 aatac 405 ||||| Sbjct: 1186 aatac 1190 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccag 1322 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 114 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 173 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 174 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 233 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 234 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 293 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 294 ggttctccccgaaatgcgttgaggcg 319 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 401 aatac 405 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 341 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 400 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 401 aatac 405 ||||| Sbjct: 571559 aatac 571563 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccag 2657226 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 441 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 500 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 501 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 558 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccag 571695 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 156 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 215 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 216 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 275 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 276 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 335 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 336 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 394 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 395 actctgaatacta 407 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 454 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 513 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 514 atgaccgctcagtgataaaggaggtgggggtgc 546 || | ||| |||| ||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgc 1502 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 32 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 81 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 155 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 214 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 215 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 274 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 275 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 334 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 335 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 392 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 393 aaactctgaatactagatatg 413 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 33 ctgaccgcgtgcctgttgaagaatgagccggcgact 68 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 440 ggccagtgagacgatgggggataagcttcat 470 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 2e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 106 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 165 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 166 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 225 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 226 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 285 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 286 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 345 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 346 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 405 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 406 ta 407 || Sbjct: 2624 ta 2625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 443 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 502 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 503 aaggcccctaaat 515 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 34 tgaccgcgtgcctgttgaagaatgagccggcgact 68 ||||| ||||||||||||||||||||||||||||| Sbjct: 2256 tgacctcgtgcctgttgaagaatgagccggcgact 2290 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,458,362 Number of Sequences: 3902068 Number of extensions: 3458362 Number of successful extensions: 66627 Number of sequences better than 10.0: 2711 Number of HSP's better than 10.0 without gapping: 2728 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 51788 Number of HSP's gapped (non-prelim): 14313 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
