ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12p12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 1158 bits (584), Expect = 0.0 Identities = 584/584 (100%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610761 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1610820 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610821 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1610880 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610881 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 1610940 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610941 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 1611000 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611001 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1611060 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611061 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1611120 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611121 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 1611180 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611181 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1611240 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611241 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1611300 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611301 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1611344
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 1158 bits (584), Expect = 0.0 Identities = 584/584 (100%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614451 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1614510 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614511 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1614570 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614571 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 1614630 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614631 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 1614690 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614691 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1614750 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614751 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1614810 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614811 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 1614870 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614871 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1614930 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614931 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1614990 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614991 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1615034
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 1118 bits (564), Expect = 0.0 Identities = 579/584 (99%) Strand = Plus / Minus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951324 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1951265 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951264 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1951205 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1951204 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccagcattaataaacggatta 1951145 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1951144 cgcggaataccctgctccatttccagttgcactaaagaattgaacggtgatccagacgga 1951085 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951084 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1951025 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951024 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1950965 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1950964 agctgtccgtcaacggtacagatagcaatgcccaatcgggaaccgtctactgtagccagc 1950905 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1950904 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1950845 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1950844 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1950785 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1950784 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1950741
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 1118 bits (564), Expect = 0.0 Identities = 579/584 (99%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137148 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 2137207 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137208 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 2137267 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2137268 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccagcattaataaacggatta 2137327 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2137328 cgcggaataccctgctccatttccagttgcactaaagaattgaacggtgatccagacgga 2137387 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137388 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 2137447 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137448 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 2137507 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2137508 agctgtccgtcaacggtacagatagcaatgcccaatcgggaaccgtctactgtagccagc 2137567 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137568 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 2137627 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137628 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 2137687 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2137688 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 2137731
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 1110 bits (560), Expect = 0.0 Identities = 578/584 (98%) Strand = Plus / Minus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601560 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtat 1601501 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601500 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1601441 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1601440 cttagtcgcccttgcaacatatcgcagaccaccagcgcaccggtattaatgaacggatta 1601381 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1601380 cgcggaataccctgttccatttccagttgcactaaagaattgaacggtgatccagacgga 1601321 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601320 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1601261 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601260 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1601201 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601200 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 1601141 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601140 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1601081 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601080 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1601021 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601020 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1600977
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 1110 bits (560), Expect = 0.0 Identities = 578/584 (98%) Strand = Plus / Minus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1641211 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtat 1641152 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1641151 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1641092 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1641091 cttagtcgcccttgcaacatatcgcagaccaccagcgcaccggtattaatgaacggatta 1641032 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1641031 cgcggaataccctgttccatttccagttgcactaaagaattgaacggtgatccagacgga 1640972 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640971 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1640912 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640911 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1640852 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640851 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 1640792 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640791 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1640732 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640731 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1640672 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640671 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1640628
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 1110 bits (560), Expect = 0.0 Identities = 578/584 (98%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491087 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1491146 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491147 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1491206 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1491207 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaataaacggatta 1491266 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1491267 cgcggaataccctgctccatttccagttgcactaaagaattgaacggtgatccagacgga 1491326 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491327 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1491386 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1491387 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctcctgcctgaaaa 1491446 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1491447 agctgtccgtcaacggtacagatagcaatgcccaatcgggaaccgtctactgtagccagc 1491506 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491507 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1491566 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491567 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1491626 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1491627 aaaagacctgcgagtatatcagagctaaatatgtcgcgtcagat 1491670
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 1102 bits (556), Expect = 0.0 Identities = 577/584 (98%) Strand = Plus / Minus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685288 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtat 1685229 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685228 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1685169 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1685168 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccagcattaataaacggatta 1685109 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1685108 cgcggaataccctgttccatttccagttgcactaaagaattgaacggtgatccagacgga 1685049 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685048 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1684989 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684988 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1684929 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1684928 agctgtccgtcaacggtacagatagcaatgcccaatcgggaaccgtctactgtagccagc 1684869 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684868 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1684809 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684808 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1684749 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684748 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1684705
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 1094 bits (552), Expect = 0.0 Identities = 576/584 (98%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789645 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1789704 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1789705 gaaatatcagacacaccacttaagccgcgcacgacttccagcatacgttgccgaggtgcg 1789764 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1789765 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaataaacggatta 1789824 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1789825 cgcggaataccctgctccatttccagttgcactaaagaattgaatggtgatccagacgga 1789884 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789885 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1789944 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789945 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1790004 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1790005 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctaccgtagccagc 1790064 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1790065 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1790124 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1790125 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1790184 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1790185 aaaagacctgcgagtatatcagagctgaatatgtagcgtcagat 1790228
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 1094 bits (552), Expect = 0.0 Identities = 577/584 (98%), Gaps = 1/584 (0%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1628231 gcgatagccgcatttcgcgcggaatgt-caaattcggaacgcgctaccaccgtatcgtat 1628289 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628290 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 1628349 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1628350 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccagcattaataaacggatta 1628409 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1628410 cgcggaataccctgctccatttccagttgcactaaagaattgaacggtgatccagacgga 1628469 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628470 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1628529 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628530 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1628589 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1628590 agctgtccgtcaacggtacagatagcaatgcccaatcgggaaccgtctactgtagccagc 1628649 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628650 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1628709 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628710 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1628769 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 584 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628770 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcagat 1628813
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 1090 bits (550), Expect = 0.0 Identities = 574/582 (98%) Strand = Plus / Plus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670455 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 1670514 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1670515 gaaatatcagacacaccacttaagccgcgcacgacttccagcatacgttgccgaggagcg 1670574 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1670575 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaataaacggatta 1670634 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1670635 cgcggaataccctgctccatttccagttgcactaaagaattgaacggtgatccagacgga 1670694 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670695 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 1670754 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670755 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 1670814 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1670815 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctaccgtagccagc 1670874 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670875 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 1670934 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670935 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 1670994 Query: 541 aaaagacctgcgagtatatcagagctgaatatgtcgcgtcag 582 |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1670995 aaaagacctgcgagtatatcagagctgaatatgtagcgtcag 1671036
>emb|AJ325245.1|HSA325245 Homo sapiens genomic sequence surrounding NotI site, clone HSJ41-861R Length = 711 Score = 866 bits (437), Expect = 0.0 Identities = 459/465 (98%), Gaps = 1/465 (0%) Strand = Plus / Minus Query: 1 gcgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtag 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 464 gcgatagccgcatttcgcgcggaatgttcaa-ttcggaacgcgctaccaccgtatcgtag 406 Query: 61 gaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 aaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcg 346 Query: 121 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 cttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggatta 286 Query: 181 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 cgcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacgga 226 Query: 241 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgaga 166 Query: 301 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 ctcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaa 106 Query: 361 agctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtctactgtagccagc 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105 agctgtccgtcaacggtacagatagcaatccccaatcgcgaaccgtctactgtagccagc 46 Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgc 465 |||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 45 gccggaatataaacagcgactttaccatgaccaatgagcggccgc 1
>emb|AJ341887.1|HSA341887 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-EF6RS Length = 743 Score = 858 bits (433), Expect = 0.0 Identities = 443/445 (99%), Gaps = 1/445 (0%) Strand = Plus / Minus Query: 21 ggaatgttcaaattcggaacgcgctaccaccgtatcgtaggaaatatcagacacaccgct 80 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 444 ggaatgttcaaat-cggaacgcgctaccaccgtattgtaggaaatatcagacacaccgct 386 Query: 81 taagccgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacat 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 taagccgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacat 326 Query: 141 atcgcagaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccat 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 atcgcagaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccat 266 Query: 201 ttccagttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgcca 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ttccagttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgcca 206 Query: 261 gatttcctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaataga 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gatttcctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaataga 146 Query: 321 ctgaatggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtaca 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 ctgaatggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtaca 86 Query: 381 gatagcaatccccaatcgggaaccgtctactgtagccagcgccggaatataatccgcgac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gatagcaatccccaatcgggaaccgtctactgtagccagcgccggaatataatccgcgac 26 Query: 441 tttaccctgaccaatgagcggccgc 465 ||||||||||||||||||||||||| Sbjct: 25 tttaccctgaccaatgagcggccgc 1
>emb|AJ341701.1|HSA341701 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BF19RS Length = 781 Score = 811 bits (409), Expect = 0.0 Identities = 414/416 (99%) Strand = Plus / Minus Query: 50 ccgtatcgtaggaaatatcagacacaccgcttaagccgcgcacgacttccagcatacgtt 109 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 416 ccgtatcggaggaaatatcagacacnccgcttaagccgcgcacgacttccagcatacgtt 357 Query: 110 gccgtggtgcgcttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaa 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gccgtggtgcgcttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaa 297 Query: 170 tgaacggattacgcggtataccctgctccatttccagttgcactaaggaattgaacggtg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 tgaacggattacgcggtataccctgctccatttccagttgcactaaggaattgaacggtg 237 Query: 230 atccagacggatctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatgg 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 atccagacggatctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatgg 177 Query: 290 cgacaacgagactcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cgacaacgagactcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctc 117 Query: 350 cggcctgaaaaagctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtcta 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 cggcctgaaaaagctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtcta 57 Query: 410 ctgtagccagcgccggaatataatccgcgactttaccctgaccaatgagcggccgc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56 ctgtagccagcgccggaatataatccgcgactttaccctgaccaatgagcggccgc 1
>emb|AJ341795.1|HSA341795 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-EK11RS Length = 715 Score = 731 bits (369), Expect = 0.0 Identities = 379/381 (99%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 86 cgcgcacgacttccagcata-cgttgccgtggtgcgcttaatcgcccttgcaacatatcg 144 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 381 cgcgcgcgacttccagcataacgttgccgtggtgcgcttaatcgcccttgcaacatatcg 322 Query: 145 cagaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccatttcc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cagaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccatttcc 262 Query: 205 agttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgccagatt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 agttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgccagatt 202 Query: 265 tcctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaatagactga 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tcctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaatagactga 142 Query: 325 atggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtacagata 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 atggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtacagata 82 Query: 385 gcaatccccaatcgggaaccgtctactgtagccagcgccggaatataatccgcgacttta 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 gcaatccccaatcgggaaccgtctactgtagccagcgccggaatataatccgcgacttta 22 Query: 445 ccctgaccaatgagcggccgc 465 ||||||||||||||||||||| Sbjct: 21 ccctgaccaatgagcggccgc 1
>emb|AJ334027.1|HSA334027 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-DD3RS Length = 716 Score = 726 bits (366), Expect = 0.0 Identities = 396/406 (97%) Strand = Plus / Minus Query: 2 cgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtagg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 cgatagccgcatttcgcgcggaatgttcaaattcggaacgcgctaccaccgtatcgtagg 350 Query: 62 aaatatcagacacaccgcttaagccgcgcacgacttccagcatacgttgccgtggtgcgc 121 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 349 aaatatcagacacaccgcttaagccgcgcgcgacttccagcatacgttgccgtggtgcgc 290 Query: 122 ttaatcgcccttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggattac 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 289 ttaatcgcccttgcaacatatcgcagaccactagcgcaccggcattaatgaacggattac 230 Query: 182 gcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacggat 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggtataccctgctccatttccagttgcactaaggaattgaacggtgatccagacggat 170 Query: 242 ctttgccgacgcgttgccagatttcctcttcggagtaatgacgcatggcgacaacgagac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 169 ctttgccgacgcgttgccagatttccttttcggagtaatgacgcatggtgacaacgagac 110 Query: 302 tcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtctccggcctgaaaaa 361 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109 tcagcactttggaaatagactgaatggaaaaacgttcttgcgcgtttccggcctgaaaaa 50 Query: 362 gctgtccgtcaacggtacagatagcaatccccaatcgggaaccgtc 407 ||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 49 tctgtccgtccctggtacagatagcaatccccaatcgggacccgtc 4
>emb|AJ333115.1|HSA333115 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-DB17RS Length = 730 Score = 428 bits (216), Expect = e-117 Identities = 346/388 (89%), Gaps = 1/388 (0%) Strand = Plus / Minus Query: 78 gcttaagccgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaa 137 |||||||| ||||| |||||||||||| ||||||||||||| ||| ||||||||| |||| Sbjct: 387 gcttaagcagcgcaagacttccagcatccgttgccgtggtgtgctaaatcgccct-gcaa 329 Query: 138 catatcgcagaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctc 197 ||||| |||| |||| | |||||||||| |||||||| |||| |||||| || ||||| Sbjct: 328 catatggcaggccacaatggcaccggcataaatgaacgtattagtcggtatcccttgctc 269 Query: 198 catttccagttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttg 257 |||| ||||| ||| |||| || | ||||||||||||||||| || ||| |||||| | Sbjct: 268 cattcccagtggcaataagcaagttctcggtgatccagacggatattagccaacgcgtag 209 Query: 258 ccagatttcctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaat 317 ||| ||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 208 ccatatttcttctttggagtaatcacgcatgcagacaacgagactcagcactttggaaat 149 Query: 318 agactgaatggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggt 377 || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 aggctgaatgaaaacacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggc 89 Query: 378 acagatagcaatccccaatcgggaaccgtctactgtagccagcgccggaatataatccgc 437 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 88 acagatagcaatccccaatcgggaaccgtctactgtagccagcgccggaagataacccgc 29 Query: 438 gactttaccctgaccaatgagcggccgc 465 |||||||||||||||||| ||||||||| Sbjct: 28 gactttaccctgaccaatcagcggccgc 1
>emb|AJ330622.1|HSA330622 Homo sapiens genomic sequence surrounding NotI site, clone NB1-195R Length = 869 Score = 252 bits (127), Expect = 1e-63 Identities = 127/127 (100%) Strand = Plus / Minus Query: 458 gcggccgcacttgccgcaagatgttttctaaaattgcattatccatggcgactgccactt 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 gcggccgcacttgccgcaagatgttttctaaaattgcattatccatggcgactgccactt 119 Query: 518 tctactcctggaccgcaggtctgaaaagacctgcgagtatatcagagctgaatatgtcgc 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 tctactcctggaccgcaggtctgaaaagacctgcgagtatatcagagctgaatatgtcgc 59 Query: 578 gtcagat 584 ||||||| Sbjct: 58 gtcagat 52
>gb|U36766.1|HSU36766 Human Not1 linking clone from chromosome 1q32 Length = 869 Score = 252 bits (127), Expect = 1e-63 Identities = 127/127 (100%) Strand = Plus / Plus Query: 458 gcggccgcacttgccgcaagatgttttctaaaattgcattatccatggcgactgccactt 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gcggccgcacttgccgcaagatgttttctaaaattgcattatccatggcgactgccactt 472 Query: 518 tctactcctggaccgcaggtctgaaaagacctgcgagtatatcagagctgaatatgtcgc 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 tctactcctggaccgcaggtctgaaaagacctgcgagtatatcagagctgaatatgtcgc 532 Query: 578 gtcagat 584 ||||||| Sbjct: 533 gtcagat 539
>gb|AE008766.1| Salmonella typhimurium LT2, section 70 of 220 of the complete genome Length = 27275 Score = 161 bits (81), Expect = 3e-36 Identities = 252/309 (81%) Strand = Plus / Minus Query: 86 cgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacatatcgc 145 ||||||| ||||||||||| || || || || ||||| | || ||||||||||| |||| Sbjct: 15201 cgcgcacaacttccagcatccgctgacgcggcgcgctaagccggccttgcaacatgtcgc 15142 Query: 146 agaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccatttcca 205 | ||||||||||| || |||||||| || ||||||||||| || || || ||||| || | Sbjct: 15141 ataccaccagcgcgcccgcattaataaatggattacgcgggatgccttgttccatctcta 15082 Query: 206 gttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgccagattt 265 || || || ||||||||||| || || || |||||||| |||||||| |||||||| | Sbjct: 15081 actgaaccaacgaattgaacggcgagccggaaggatcttttccgacgcgctgccagatct 15022 Query: 266 cctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaatagactgaa 325 ||||||| | ||||||||||| || || || ||||| |||||||| ||||||||||||| Sbjct: 15021 cctcttccggataatgacgcatcgccaccaccagactgagcactttcgaaatagactgaa 14962 Query: 326 tggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtacagatag 385 | || || ||||| ||||| || || |||||| || |||| ||||| |||||||| || | Sbjct: 14961 tagagaagcgttcgtgcgcatcgcccgcctgataatgctgcccgtccacggtacaaatcg 14902 Query: 386 caatcccca 394 | ||||||| Sbjct: 14901 ctatcccca 14893 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Minus Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 ||||||||||| || |||||||| ||||| |||||||| || || || || | || || Sbjct: 14866 gccggaatatagtcagcgactttgccctggccaatgagggggcgaacgcgctgtaaaatc 14807 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 | ||||||||||||||||||||||| ||||| | ||||| | |||||||||| Sbjct: 14806 gtctctaaaattgcattatccatggccctggccacaacatgctccttgctcgcaggtctg 14747 Query: 541 aaaagacctgcgagtatatcagag 564 ||||| |||||||||||| ||||| Sbjct: 14746 aaaaggcctgcgagtatagcagag 14723
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 161 bits (81), Expect = 3e-36 Identities = 252/309 (81%) Strand = Plus / Plus Query: 86 cgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacatatcgc 145 ||||||| ||||||||||| || || || || ||||| | || ||||||||||| |||| Sbjct: 1413834 cgcgcacaacttccagcatccgctgacgcggcgcgctaagccggccttgcaacatgtcgc 1413893 Query: 146 agaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccatttcca 205 | ||||||||||| || |||||||| || ||||||||||| || || || ||||| || | Sbjct: 1413894 ataccaccagcgcgcccgcattaataaatggattacgcgggatgccttgttccatctcta 1413953 Query: 206 gttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgccagattt 265 || || || ||||||||||| || || || |||||||| |||||||| |||||||| | Sbjct: 1413954 actgaaccaacgaattgaacggcgagccggaaggatcttttccgacgcgctgccagatct 1414013 Query: 266 cctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaatagactgaa 325 ||||||| | ||||||||||| || || || ||||| |||||||| ||||||||||||| Sbjct: 1414014 cctcttccggataatgacgcatcgccaccaccagactaagcactttcgaaatagactgaa 1414073 Query: 326 tggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtacagatag 385 | || || ||||| ||||| || || |||||| || |||| ||||| |||||||| || | Sbjct: 1414074 tagagaagcgttcgtgcgcatcgcccgcctgataatgctgcccgtccacggtacaaatcg 1414133 Query: 386 caatcccca 394 | ||||||| Sbjct: 1414134 ctatcccca 1414142 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Plus Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 ||||||||||| || |||||||| ||||| |||||||| || || || || | || || Sbjct: 1414169 gccggaatatagtcagcgactttgccctggccaatgagggggcgaacgcgctgtaaaatc 1414228 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 | ||||||||||||||||||||||| ||||| | ||||| | |||||||||| Sbjct: 1414229 gtctctaaaattgcattatccatggccctggccacaacatgctccttgctcgcaggtctg 1414288 Query: 541 aaaagacctgcgagtatatcagag 564 ||||| |||||||||||| ||||| Sbjct: 1414289 aaaaggcctgcgagtatagcagag 1414312
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 161 bits (81), Expect = 3e-36 Identities = 252/309 (81%) Strand = Plus / Minus Query: 86 cgcgcacgacttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacatatcgc 145 ||||||| ||||||||||| || || || || ||||| | || ||||||||||| |||| Sbjct: 1641221 cgcgcacaacttccagcatccgctgacgcggcgcgctaagccggccttgcaacatgtcgc 1641162 Query: 146 agaccaccagcgcaccggcattaatgaacggattacgcggtataccctgctccatttcca 205 | ||||||||||| || |||||||| || ||||||||||| || || || ||||| || | Sbjct: 1641161 ataccaccagcgcgcccgcattaataaatggattacgcgggatgccttgttccatctcta 1641102 Query: 206 gttgcactaaggaattgaacggtgatccagacggatctttgccgacgcgttgccagattt 265 || || || ||||||||||| || || || |||||||| |||||||| |||||||| | Sbjct: 1641101 actgaaccaacgaattgaacggcgagccggaaggatcttttccgacgcgctgccagatct 1641042 Query: 266 cctcttcggagtaatgacgcatggcgacaacgagactcagcactttggaaatagactgaa 325 ||||||| | ||||||||||| || || || ||||| |||||||| ||||||||||||| Sbjct: 1641041 cctcttccggataatgacgcatcgccaccaccagactaagcactttcgaaatagactgaa 1640982 Query: 326 tggaaaaacgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtacagatag 385 | || || ||||| ||||| || || |||||| || |||| ||||| |||||||| || | Sbjct: 1640981 tagagaagcgttcgtgcgcatcgcccgcctgataatgctgcccgtccacggtacaaatcg 1640922 Query: 386 caatcccca 394 | ||||||| Sbjct: 1640921 ctatcccca 1640913 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 ||||||||||| || |||||||| ||||| |||||||| || || || || | || || Sbjct: 1640886 gccggaatatagtcagcgactttgccctggccaatgagggggcgaacgcgctgtaaaatc 1640827 Query: 481 ttttctaaaattgcattatccatggc 506 | ||||||||||||||||||||||| Sbjct: 1640826 gtctctaaaattgcattatccatggc 1640801
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 141 bits (71), Expect = 3e-30 Identities = 233/287 (81%) Strand = Plus / Minus Query: 94 acttccagcatacgttgccgtggtgcgcttaatcgcccttgcaacatatcgcagaccacc 153 ||||||||||| || || || || ||||| | |||||||||||||| ||||| |||||| Sbjct: 1491322 acttccagcatccgctgacgcggcgcgctaagccgcccttgcaacatgtcgcataccacc 1491263 Query: 154 agcgcaccggcattaatgaacggattacgcggtataccctgctccatttccagttgcact 213 ||||| || |||||||| || ||||||||||| || || || ||||| || | || || Sbjct: 1491262 agcgcgcccgcattaataaatggattacgcgggatgccttgttccatctctaactgaacc 1491203 Query: 214 aaggaattgaacggtgatccagacggatctttgccgacgcgttgccagatttcctcttcg 273 || ||||||||||| || || || |||||||| ||||| || |||||||| |||||||| Sbjct: 1491202 aacgaattgaacggcgagccggaaggatcttttccgacacgctgccagatctcctcttcc 1491143 Query: 274 gagtaatgacgcatggcgacaacgagactcagcactttggaaatagactgaatggaaaaa 333 | ||||||||||| || | || ||||| |||||||| |||||||||||||| || || Sbjct: 1491142 ggataatgacgcatcgccatcaccagactgagcactttcgaaatagactgaatagagaag 1491083 Query: 334 cgttcttgcgcgtctccggcctgaaaaagctgtccgtcaacggtaca 380 ||||| ||||| || || |||||| || |||| ||||| |||||||| Sbjct: 1491082 cgttcgtgcgcatcgcccgcctgataatgctgcccgtccacggtaca 1491036 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Minus Query: 421 gccggaatataatccgcgactttaccctgaccaatgagcggccgcacttgccgcaagatg 480 ||||||||||| || || ||||| ||||| |||||||| || || || || | || || Sbjct: 1490995 gccggaatatagtcagctactttgccctggccaatgagggggcgaacgcgctgtaaaatc 1490936 Query: 481 ttttctaaaattgcattatccatggcgactgccactttctactcctggaccgcaggtctg 540 ||||||||||||||||||||||||| ||||| | ||||| | |||||||||| Sbjct: 1490935 gtttctaaaattgcattatccatggccctggccacaacatgctccttgctcgcaggtctg 1490876 Query: 541 aaaagacctgcgagtatatcagag 564 ||||| |||||||||||| ||||| Sbjct: 1490875 aaaaggcctgcgagtatagcagag 1490852
>emb|AJ333714.1|HSA333714 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BO18RS Length = 699 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 416 ccagcgccggaatataatccgcgactttaccctgaccaatgagcggccgc 465 |||||||| ||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 50 ccagcgcccgaatagaatccgcgactttacccagaccaataagcggccgc 1
>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the complete genome Length = 290393 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 415 gccagcgccggaatataatccgcgactttaccctgaccaat 455 ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 188203 gccagtgcgggaatataatcagcgactttaccctgaccaat 188163 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 132 ttgcaacatatcgcagaccaccagcgc 158 ||||||||||||||||||||||||||| Sbjct: 188486 ttgcaacatatcgcagaccaccagcgc 188460 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 4 atagccgcatttcgcgcggaatgttcaaattcggaacgcgc 44 ||||||||||| || | ||||| ||||||||||||||||| Sbjct: 188614 atagccgcattgcgatctgaatgctcaaattcggaacgcgc 188574
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 415 gccagcgccggaatataatccgcgactttaccctgaccaat 455 ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 3677059 gccagtgcgggaatataatcagcgactttaccctgaccaat 3677099 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 132 ttgcaacatatcgcagaccaccagcgc 158 ||||||||||||||||||||||||||| Sbjct: 3676776 ttgcaacatatcgcagaccaccagcgc 3676802 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 4 atagccgcatttcgcgcggaatgttcaaattcggaacgcgc 44 ||||||||||| || | ||||| ||||||||||||||||| Sbjct: 3676648 atagccgcattgcgatctgaatgctcaaattcggaacgcgc 3676688
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 415 gccagcgccggaatataatccgcgactttaccctgaccaat 455 ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 3794804 gccagtgcgggaatataatcagcgactttaccctgaccaat 3794844 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 132 ttgcaacatatcgcagaccaccagcgc 158 ||||||||||||||||||||||||||| Sbjct: 3794521 ttgcaacatatcgcagaccaccagcgc 3794547 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 4 atagccgcatttcgcgcggaatgttcaaattcggaacgcgc 44 ||||||||||| || | ||||| ||||||||||||||||| Sbjct: 3794393 atagccgcattgcgatctgaatgctcaaattcggaacgcgc 3794433
>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20 Length = 208050 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 415 gccagcgccggaatataatccgcgactttaccctgaccaat 455 ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 137981 gccagtgcgggaatataatcagcgactttaccctgaccaat 138021 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 132 ttgcaacatatcgcagaccaccagcgc 158 ||||||||||||||||||||||||||| Sbjct: 137698 ttgcaacatatcgcagaccaccagcgc 137724 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 4 atagccgcatttcgcgcggaatgttcaaattcggaacgcgc 44 ||||||||||| || | ||||| ||||||||||||||||| Sbjct: 137570 atagccgcattgcgatctgaatgctcaaattcggaacgcgc 137610
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 142 tcgcagaccaccagcgcaccggcattaatgaacggattacgcgg 185 ||||||| ||||||||| |||||||| ||||||||||| ||||| Sbjct: 3848810 tcgcagatcaccagcgccccggcattgatgaacggattgcgcgg 3848853
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 142 tcgcagaccaccagcgcaccggcattaatgaacgg 176 ||||||| |||||||||||||||||| |||||||| Sbjct: 2664041 tcgcagatcaccagcgcaccggcattgatgaacgg 2664007
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 148 accaccagcgcaccggcattaatgaacggattacgcgg 185 ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1443722 accaccagcgcgccggcattgatgaacggattgcgcgg 1443685
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 163 gcattaatgaacggattacgcggtataccctgctccatttc 203 |||||||||||||| || ||||| || |||||||||||||| Sbjct: 1492767 gcattaatgaacgggttgcgcggaatcccctgctccatttc 1492727
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 163 gcattaatgaacggattacgcggtataccctgctccatttc 203 |||||||||||||| || ||||| || |||||||||||||| Sbjct: 2934100 gcattaatgaacgggttgcgcggaatcccctgctccatttc 2934140
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 142 tcgcagaccaccagcgcaccggcattaatgaacggattacgcgg 185 ||||||| |||||| ||||||||||| |||||||| || ||||| Sbjct: 2750636 tcgcagatcaccagtgcaccggcattgatgaacgggttgcgcgg 2750593
>gb|AE004132.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 40 of 251 of the complete chromosome Length = 16251 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Minus Query: 132 ttgcaacatatcgcagaccaccagcgcaccggcattaatgaacggattacgcggtatacc 191 ||||| ||| ||||| ||||| | ||| |||||||| || || |||||||| || || || Sbjct: 8418 ttgcagcatgtcgcacaccacaatcgcgccggcattgataaatggattacgtgggattcc 8359 Query: 192 ctgctccatttc 203 |||||||||||| Sbjct: 8358 ctgctccatttc 8347 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 301 ctcagcactttggaaatagactgaatggaaaa 332 |||||||||||||| || |||||||| ||||| Sbjct: 8249 ctcagcactttggatatcgactgaatcgaaaa 8218
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 241 tctttgccgacgcgttgccagatttcctcttc 272 |||||||| ||||||||||||||||| ||||| Sbjct: 3229335 tctttgccaacgcgttgccagatttcatcttc 3229366
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 151 accagcgcaccggcattaatgaacggattacgcgg 185 |||||||||||||| || ||||||||||| ||||| Sbjct: 848424 accagcgcaccggcgttgatgaacggattgcgcgg 848458
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 154 agcgcaccggcattaatgaacggattacgcggtat 188 ||||| |||||||| ||||||||||| |||||||| Sbjct: 2159746 agcgccccggcattgatgaacggattgcgcggtat 2159712
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 156 cgcaccggcattaatgaacggattacgcgg 185 |||||||||||| ||||||||||| ||||| Sbjct: 217451 cgcaccggcattgatgaacggattgcgcgg 217480
>gb|AC079398.8| Homo sapiens BAC clone RP11-330E10 from 7, complete sequence Length = 63681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctgctccatttccagttgca 211 ||||||||||||||||||||| Sbjct: 34865 cctgctccatttccagttgca 34845
>gb|AC016884.10| Homo sapiens chromosome , clone RP11-350M7, complete sequence Length = 209320 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 aaatagactgaatggaaaaac 334 ||||||||||||||||||||| Sbjct: 131290 aaatagactgaatggaaaaac 131270
>ref|XM_879713.1| PREDICTED: Bos taurus similar to inositol hexaphosphate kinase 1 isoform 1, transcript variant 8 (LOC534029), mRNA Length = 1856 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cctggaccgcaggtctgaaa 543 |||||||||||||||||||| Sbjct: 1375 cctggaccgcaggtctgaaa 1394
>ref|XM_879657.1| PREDICTED: Bos taurus similar to inositol hexaphosphate kinase 1 isoform 1, transcript variant 7 (LOC534029), mRNA Length = 1804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cctggaccgcaggtctgaaa 543 |||||||||||||||||||| Sbjct: 1325 cctggaccgcaggtctgaaa 1344
>ref|XM_879624.1| PREDICTED: Bos taurus similar to inositol hexaphosphate kinase 1 isoform 1, transcript variant 6 (LOC534029), mRNA Length = 1484 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cctggaccgcaggtctgaaa 543 |||||||||||||||||||| Sbjct: 1003 cctggaccgcaggtctgaaa 1022
>ref|XM_879534.1| PREDICTED: Bos taurus similar to inositol hexaphosphate kinase 1 isoform 1, transcript variant 3 (LOC534029), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cctggaccgcaggtctgaaa 543 |||||||||||||||||||| Sbjct: 1340 cctggaccgcaggtctgaaa 1359
>ref|XM_867036.1| PREDICTED: Bos taurus similar to inositol hexaphosphate kinase 1 isoform 1, transcript variant 2 (LOC534029), mRNA Length = 1841 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cctggaccgcaggtctgaaa 543 |||||||||||||||||||| Sbjct: 1360 cctggaccgcaggtctgaaa 1379
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 153 cagcgcaccggcattaatgaacggattacgcggtat 188 |||||| || ||||| ||||||||||| |||||||| Sbjct: 2677718 cagcgcccccgcattgatgaacggattgcgcggtat 2677753
>gb|AC102676.16| Mus musculus chromosome 14, clone RP23-266L19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttttctaaaattgcattatc 500 |||||||||||||||||||| Sbjct: 62309 ttttctaaaattgcattatc 62328
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gccgcgcacgacttccagca 103 |||||||||||||||||||| Sbjct: 2010149 gccgcgcacgacttccagca 2010168
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gccagcgccggaatataatccgcgactttacc 446 |||| ||||||||||||||| || |||||||| Sbjct: 2480109 gccaacgccggaatataatcggccactttacc 2480140
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gccgcgcacgacttccagca 103 |||||||||||||||||||| Sbjct: 1521468 gccgcgcacgacttccagca 1521449
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 153 cagcgcaccggcattaatgaacggattacgcggtat 188 |||||| || ||||| ||||||||||| |||||||| Sbjct: 857968 cagcgcccccgcattgatgaacggattgcgcggtat 858003
>emb|AL672173.9| Mouse DNA sequence from clone RP23-149O19 on chromosome 11 Contains a novel pseudogene similar to RIKEN cDNA 1700066C05 gene, complete sequence Length = 118767 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tccatttccagttgcactaa 215 |||||||||||||||||||| Sbjct: 33500 tccatttccagttgcactaa 33519
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gttcttgcgcgtctccggcc 354 |||||||||||||||||||| Sbjct: 130040 gttcttgcgcgtctccggcc 130059
>gb|AC012622.6| Homo sapiens chromosome 5 clone CTD-2072F21, complete sequence Length = 168237 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 aagatgttttctaaaattgc 494 |||||||||||||||||||| Sbjct: 143862 aagatgttttctaaaattgc 143843
>gb|AY170317.1| Porcine lymphotropic herpesvirus 2 isolate 568 long unique region, partial sequence Length = 59673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cctgctccatttccagttgc 210 |||||||||||||||||||| Sbjct: 12106 cctgctccatttccagttgc 12087
>gb|AY170314.1| Porcine lymphotropic herpesvirus 2 isolate 546 long unique region, partial sequence Length = 32480 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cctgctccatttccagttgc 210 |||||||||||||||||||| Sbjct: 12106 cctgctccatttccagttgc 12087
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 153 cagcgcaccggcattaatgaacggattacgcggtat 188 |||||| || ||||| ||||||||||| |||||||| Sbjct: 841093 cagcgcccccgcattgatgaacggattgcgcggtat 841128
>gb|AC155229.2| Mus musculus BAC clone RP24-335F18 from chromosome 12, complete sequence Length = 156833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 atgttttctaaaattgcatt 497 |||||||||||||||||||| Sbjct: 119876 atgttttctaaaattgcatt 119895
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gccgcgcacgacttccagca 103 |||||||||||||||||||| Sbjct: 1885717 gccgcgcacgacttccagca 1885698
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ctcagcactttggaaataga 320 |||||||||||||||||||| Sbjct: 95739 ctcagcactttggaaataga 95720 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,093,396 Number of Sequences: 3902068 Number of extensions: 4093396 Number of successful extensions: 56163 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55018 Number of HSP's gapped (non-prelim): 1137 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
