ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1318 bits (665), Expect = 0.0 Identities = 699/705 (99%), Gaps = 4/705 (0%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 1008 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 1068 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1069 ttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcccagga 1128 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 1188 Query: 242 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1189 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 1248 Query: 302 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 1308 Query: 362 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 1368 Query: 422 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1369 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaa 1428 Query: 482 attctccatac-acacccaccatctcttgctgcataggaggaggtaaaggagcacagcaa 540 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1429 attctccatacaacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaa 1488 Query: 541 ggtactttgcccg-tgccggaaggttgcaccgaccaaaatgccaagaactacgacccaac 599 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1489 ggtactttgcccgatgccggaaggttgcaccgaccaaaatgccaagaactacgacccaac 1548 Query: 600 ggcaaggagcgacg-acggcagctgcctttacaccttttaagcatgccacttttaatatc 658 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1549 ggcaaggagcgacgaacggcagctgcctttacaccttttaagcatgccacttttaatatc 1608 Query: 659 tgatgttttacctac-ctaagtccgcatcgcatccaagcgattgc 702 ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1609 tgatgttttacctacactaagtccgcatcgcatccaagcgattgc 1653
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 1076 bits (543), Expect = 0.0 Identities = 668/707 (94%), Gaps = 7/707 (0%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 ||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 19 atcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgt 78 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 79 atggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagggtatc 138 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 139 ttccagaccgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcccagga 198 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 241 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 199 caatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaag 258 Query: 242 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 301 ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 259 tgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcgggacgga 318 Query: 302 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 361 || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 319 ccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacgggcacatg 378 Query: 362 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 438 Query: 422 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaa 481 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 439 gcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggttagaac 498 Query: 482 attctccatacacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaag 541 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 499 attctccatacacacccaccatctcttgctgcataggaggaggtaaaggggcacagcaag 558 Query: 542 gtactttgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacgg 601 |||||||||| || |||| ||| ||||||||||| | ||||||||||| ||||||||||| Sbjct: 559 gtactttgcctgtaccggcaggatgcaccgaccagactgccaagaacttcgacccaacgg 618 Query: 602 caaggagcgacgacggcagctgcctttacaccttttaagcatgccacttttaatatctga 661 | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 619 cgaggagtgacgacggcagctgcctttacaccttttaagcatgcca-atttaatatctga 677 Query: 662 tgttttacc-----tacctaagt-ccgcatcgcatccaagcgattgc 702 ||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 678 tgttttatcctttgtacctaagtaccgcatcgcatccaagcgattgc 724
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 1076 bits (543), Expect = 0.0 Identities = 668/707 (94%), Gaps = 7/707 (0%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 ||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 869 atcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgt 928 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 929 atggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagggtatc 988 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 ttccagaccgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcccagga 1048 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 241 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1049 caatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaag 1108 Query: 242 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 301 ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1109 tgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcgggacgga 1168 Query: 302 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 361 || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1169 ccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacgggcacatg 1228 Query: 362 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1229 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 1288 Query: 422 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaa 481 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1289 gcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggttagaac 1348 Query: 482 attctccatacacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaag 541 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1349 attctccatacacacccaccatctcttgctgcataggaggaggtaaaggggcacagcaag 1408 Query: 542 gtactttgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacgg 601 |||||||||| || |||| ||| ||||||||||| | ||||||||||| ||||||||||| Sbjct: 1409 gtactttgcctgtaccggcaggatgcaccgaccagactgccaagaacttcgacccaacgg 1468 Query: 602 caaggagcgacgacggcagctgcctttacaccttttaagcatgccacttttaatatctga 661 | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1469 cgaggagtgacgacggcagctgcctttacaccttttaagcatgcca-atttaatatctga 1527 Query: 662 tgttttacc-----tacctaagt-ccgcatcgcatccaagcgattgc 702 ||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 1528 tgttttatcctttgtacctaagtaccgcatcgcatccaagcgattgc 1574
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 753 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 813 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 814 ttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcccagga 873 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 933 Query: 242 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 tgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacggg 993 Query: 302 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 cccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatg 1053 Query: 362 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccag 1113 Query: 422 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 gcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 1167 Score = 357 bits (180), Expect = 3e-95 Identities = 180/180 (100%) Strand = Plus / Plus Query: 523 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 1224 Query: 583 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1225 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 1284 Query: 643 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 1344
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 848 bits (428), Expect = 0.0 Identities = 592/646 (91%), Gaps = 2/646 (0%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||||||| Sbjct: 884 tcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatgg 943 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 944 agaagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttcc 1003 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1004 agaccgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttcccaggacagt 1063 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1064 ccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtggg 1123 Query: 246 tcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccg 305 | || |||||||| |||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 1124 tgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccg 1183 Query: 306 tgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcg 365 | |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| | Sbjct: 1184 tcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttg 1243 Query: 366 tccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcag 425 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1244 tccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcag 1303 Query: 426 ctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattc 485 ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| | || Sbjct: 1304 ctctgggtgatgcgaacaaggatgccatgaagactggttccttctacggttagaacactc 1363 Query: 486 tccatacacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaaggtac 545 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 1364 ttcat--acacccaccatctcttgctgcataggaggaggtaaaggagcacaacaaggcac 1421 Query: 546 tttgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaag 605 |||||| |||||||||||||| ||||||| |||||||||||| ||||||||| || || Sbjct: 1422 tttgcctgtgccggaaggttgtaccgaccgggatgccaagaacttcgacccaaccgcgag 1481 Query: 606 gagcgacgacggcagctgcctttacaccttttaagcatgccacttt 651 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1482 gagcgacgacggcagctgcctttacaccttttaagcatgccacttt 1527
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 664 bits (335), Expect = 0.0 Identities = 335/335 (100%) Strand = Plus / Plus Query: 191 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 251 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 431 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320 Query: 491 acacacccaccatctcttgctgcataggaggaggt 525 ||||||||||||||||||||||||||||||||||| Sbjct: 7321 acacacccaccatctcttgctgcataggaggaggt 7355 Score = 377 bits (190), Expect = e-101 Identities = 190/190 (100%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6691 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 6750 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6751 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 6810 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6811 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 6870 Query: 182 caatccattg 191 |||||||||| Sbjct: 6871 caatccattg 6880 Score = 361 bits (182), Expect = 2e-96 Identities = 182/182 (100%) Strand = Plus / Plus Query: 521 gaggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7523 gaggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatg 7582 Query: 581 ccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaag 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7583 ccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaag 7642 Query: 641 catgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgatt 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7643 catgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgatt 7702 Query: 701 gc 702 || Sbjct: 7703 gc 7704 Score = 184 bits (93), Expect = 3e-43 Identities = 207/245 (84%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||| Sbjct: 3568 tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 3627 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 3628 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttcc 3687 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| | || || | | | || ||||||||||| || || | Sbjct: 3688 gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagt 3747 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||| Sbjct: 3748 ccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtggg 3807 Query: 246 tcggc 250 ||||| Sbjct: 3808 tcggc 3812 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 371 gagcaggacaatgtcaagcgtgtgcagct 399 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 595 bits (300), Expect = e-167 Identities = 426/468 (91%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 |||||||| ||||| || |||||||| ||||| || || || | ||| |||||||||||| Sbjct: 896 gtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatggag 955 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 ||||| |||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 956 aagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1015 Query: 128 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 187 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1016 accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtcc 1075 Query: 188 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 247 || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1076 atcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 1135 Query: 248 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 307 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1136 tcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgtc 1195 Query: 308 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 367 |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| ||| Sbjct: 1196 accttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtc 1255 Query: 368 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 427 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1256 caggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagct 1315 Query: 428 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 475 ||||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 1316 ctgggtgatgcgaacaaggatgccatgaagactggttccttctacggt 1363 Score = 176 bits (89), Expect = 6e-41 Identities = 119/129 (92%) Strand = Plus / Plus Query: 523 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 582 |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| ||||| Sbjct: 1361 ggtaaaggagcacaacaaggcactttgcctgtgccggaaggttgtaccgaccgggatgcc 1420 Query: 583 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 642 ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 aagaacttcgacccaaccgcgaggagcgacgacggcagctgcctttacaccttttaagca 1480 Query: 643 tgccacttt 651 ||||||||| Sbjct: 1481 tgccacttt 1489
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 521 bits (263), Expect = e-145 Identities = 296/307 (96%) Strand = Plus / Plus Query: 191 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 250 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 251 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 310 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 431 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 490 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301 Query: 491 acacacc 497 ||||||| Sbjct: 302 acacacc 308
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 846 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 905 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 906 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 965 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 966 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1025 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1026 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1085 Query: 246 t 246 | Sbjct: 1086 t 1086 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1426 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1485 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 1486 gcgacgacggcagctgcctttacaccttttaagca 1520 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 841 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 900 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 901 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 960 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 961 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1020 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1021 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1080 Query: 246 t 246 | Sbjct: 1081 t 1081 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1336 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1395 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 1396 gcgacgacggcagctgcctttacaccttttaagca 1430 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 443 caggatgcgatgaagactggttccttctacgg 474 || || ||||||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 95 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 154 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 155 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 214 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 215 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 274 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 275 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 334 Query: 246 t 246 | Sbjct: 335 t 335 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 889 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 948 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 949 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 1008 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 1009 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1068 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1069 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1128 Query: 246 t 246 | Sbjct: 1129 t 1129 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359 Score = 119 bits (60), Expect = 1e-23 Identities = 114/130 (87%), Gaps = 4/130 (3%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1434 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1493 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1494 ccctgttgccaagaatt-cgacccaacggcgaggagcgacgacggcagctgcctttacac 1552 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1553 cttttaagca 1562
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 840 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 899 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 900 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 959 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 960 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1019 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1020 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1079 Query: 246 t 246 | Sbjct: 1080 t 1080 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1385 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1444 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1445 ccctgttgccaagaacttcgacccaacggcgaggagcgacgacggcagctgcctttacac 1504 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1505 cttttaagca 1514 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 878 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 937 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 938 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 997 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 998 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1057 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1058 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1117 Query: 246 t 246 | Sbjct: 1118 t 1118 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1423 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1482 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1483 ccctgttgccaagaacttcgacccaacggcgaggagcgacgacggcagctgcctttacac 1542 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1543 cttttaagca 1552 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 877 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 936 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 937 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 996 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 997 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1056 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1057 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1116 Query: 246 t 246 | Sbjct: 1117 t 1117 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1422 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1481 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1482 ccctgttgccaagaacttcgacccaacggcgaggagcgacgacggcagctgcctttacac 1541 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1542 cttttaagca 1551 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 661 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 720 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 721 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 780 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 781 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 840 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 841 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 900 Query: 246 t 246 | Sbjct: 901 t 901 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1206 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1265 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1266 ccctgttgccaagaacttcgacccaacggcgaggagcgacgacggcagctgcctttacac 1325 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1326 cttttaagca 1335 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 882 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 941 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 942 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 1001 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 1002 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1061 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1062 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1121 Query: 246 t 246 | Sbjct: 1122 t 1122 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 516 aggaggaggtaaaggagcacagcaag---gtactttgcccgtgccggaaggttgcaccga 572 ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1427 aggaggagggcaaggagcacagcaagcaggtaacctgcctgtgccggaaggttgcaccga 1486 Query: 573 ccaaaatgccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacac 632 || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1487 ccctgttgccaagaacttcgacccaacggcgaggagcgacgacggcagctgcctttacac 1546 Query: 633 cttttaagca 642 |||||||||| Sbjct: 1547 cttttaagca 1556 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 443 caggatgcgatgaagactggttccttctacggtt 476 || || ||||||||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 876 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 935 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 936 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 995 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 996 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 1055 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| || || ||||| ||||| ||||| || || |||||||| |||||||||||||||| Sbjct: 1056 ccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtggg 1115 Query: 246 t 246 | Sbjct: 1116 t 1116 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1371 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1430 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 1431 gcgacgacggcagctgcctttacaccttttaagca 1465 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 443 caggatgcgatgaagactggttccttctacgg 474 || || ||||||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 202 bits (102), Expect = 1e-48 Identities = 321/394 (81%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||||||||| ||||| || || ||||| || || || |||| Sbjct: 849 tcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatgg 908 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 909 agaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttcc 968 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| | || || | | | || ||||||||||| || || | Sbjct: 969 gcaccgacaacgtccccgacgaggccgtggtgaggctggtggacaccttcccggggcagt 1028 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||| Sbjct: 1029 ccatcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtggg 1088 Query: 246 tcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccg 305 ||||| | ||| |||||||||| |||| |||| || ||||| |||| ||||| Sbjct: 1089 tcggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccagggaggggccgc 1148 Query: 306 tgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcg 365 ||| ||||| ||||| |||||||| |||||||||| | |||||||| |||||||| | Sbjct: 1149 cgacgttcgaccagcccaagatgaccatcgagaagctcatggagtacggccacatgctgg 1208 Query: 366 tccaggagcaggacaatgtcaagcgtgtgcagct 399 ||||||||||||| || || ||||| |||||||| Sbjct: 1209 tccaggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 184 bits (93), Expect = 3e-43 Identities = 207/245 (84%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||| Sbjct: 999 tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 1058 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 1059 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttcc 1118 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| | || || | | | || ||||||||||| || || | Sbjct: 1119 gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagt 1178 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 245 |||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||| Sbjct: 1179 ccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtggg 1238 Query: 246 tcggc 250 ||||| Sbjct: 1239 tcggc 1243 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 371 gagcaggacaatgtcaagcgtgtgcagct 399 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 174 bits (88), Expect = 3e-40 Identities = 160/184 (86%) Strand = Plus / Minus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 108871 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 108812 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 108811 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 108752 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 108751 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 108692 Query: 186 ccat 189 |||| Sbjct: 108691 ccat 108688 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 107252 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 107193 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 107192 gcgacgacggcagctgcctttacaccttttaagca 107158 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 443 caggatgcgatgaagactggttccttctacggttaga 479 || || |||||||||||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 122 ttcc 125 |||| Sbjct: 112459 ttcc 112456 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 550 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 609 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 112127 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 112068 Query: 610 gacgacggcagctgc 624 ||||||||||||||| Sbjct: 112067 gacgacggcagctgc 112053 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 197 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 246 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactc 291 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 174 bits (88), Expect = 3e-40 Identities = 160/184 (86%) Strand = Plus / Minus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 30748 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 30689 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 30688 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 30629 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 30628 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 30569 Query: 186 ccat 189 |||| Sbjct: 30568 ccat 30565 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 29133 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 29074 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 29073 gcgacgacggcagctgcctttacaccttttaagca 29039 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 443 caggatgcgatgaagactggttccttctacggttaga 479 || || |||||||||||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 122 ttcc 125 |||| Sbjct: 34336 ttcc 34333 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 550 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 609 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 34004 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 33945 Query: 610 gacgacggcagctgc 624 ||||||||||||||| Sbjct: 33944 gacgacggcagctgc 33930 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 197 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 246 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactc 291 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 174 bits (88), Expect = 3e-40 Identities = 160/184 (86%) Strand = Plus / Minus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 28304010 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 28303951 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28303950 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 28303891 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 28303890 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 28303831 Query: 186 ccat 189 |||| Sbjct: 28303830 ccat 28303827 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 28302395 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 28302336 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 28302335 gcgacgacggcagctgcctttacaccttttaagca 28302301 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 443 caggatgcgatgaagactggttccttctacggttaga 479 || || |||||||||||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 122 ttcc 125 |||| Sbjct: 28307598 ttcc 28307595 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 550 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 609 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 28307266 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 28307207 Query: 610 gacgacggcagctgc 624 ||||||||||||||| Sbjct: 28307206 gacgacggcagctgc 28307192 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 197 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 246 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactc 291 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 174 bits (88), Expect = 3e-40 Identities = 160/184 (86%) Strand = Plus / Minus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||| Sbjct: 28286459 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatgg 28286400 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28286399 agaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttcc 28286340 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||| Sbjct: 28286339 gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaat 28286280 Query: 186 ccat 189 |||| Sbjct: 28286279 ccat 28286276 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 28284844 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 28284785 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 ||||||||||||||||||||||||||||||||||| Sbjct: 28284784 gcgacgacggcagctgcctttacaccttttaagca 28284750 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 322 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 323 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 382 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 383 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 442 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 443 caggatgcgatgaagactggttccttctacggttaga 479 || || |||||||||||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 122 ttcc 125 |||| Sbjct: 28290047 ttcc 28290044 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 550 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 609 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 28289715 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 28289656 Query: 610 gacgacggcagctgc 624 ||||||||||||||| Sbjct: 28289655 gacgacggcagctgc 28289641 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 197 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 246 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 263 gagaacattggcaagaggctggtgaactc 291 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 850 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 909 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 910 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 14264 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 14205 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14204 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 927 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 986 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 987 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3019 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 3078 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 124 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3079 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 149 bits (75), Expect = 1e-32 Identities = 168/199 (84%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| |||||||| ||||| || | |||||||| || ||||||||||||||||||| Sbjct: 966 tcgtcactggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgtatgg 1025 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 1026 agaagttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatcttca 1085 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||||||||| ||| || || |||||| |||||||||||||||| || |||| Sbjct: 1086 ggaccgacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaat 1145 Query: 186 ccattgactttttcggtgc 204 | ||||| || |||||||| Sbjct: 1146 ctattgatttcttcggtgc 1164
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 149 bits (75), Expect = 1e-32 Identities = 198/239 (82%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||| Sbjct: 836 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 895 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| Sbjct: 896 agaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttca 955 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||| Sbjct: 956 ggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaat 1015 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 244 |||||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 1016 ccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074 Score = 103 bits (52), Expect = 8e-19 Identities = 166/204 (81%) Strand = Plus / Plus Query: 275 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 334 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 335 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 394 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 395 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 454 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 455 aagactggttccttctacggttag 478 |||||||| |||||||| |||||| Sbjct: 1285 aagactggatccttctatggttag 1308 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 559 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 618 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1377 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1436 Query: 619 agctgcctttacac 632 |||||||| ||||| Sbjct: 1437 agctgcctgtacac 1450
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 149 bits (75), Expect = 1e-32 Identities = 198/239 (82%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||| Sbjct: 699 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 758 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| Sbjct: 759 agaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttca 818 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||| Sbjct: 819 ggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaat 878 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 244 |||||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 879 ccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 937 Score = 97.6 bits (49), Expect = 5e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 275 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 334 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 335 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 394 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 395 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 454 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 455 aagactggttccttcta 471 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 559 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 618 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1202 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1261 Query: 619 agctgcctttacac 632 |||||||| ||||| Sbjct: 1262 agctgcctgtacac 1275
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 149 bits (75), Expect = 1e-32 Identities = 198/239 (82%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||| Sbjct: 535 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 594 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| Sbjct: 595 agaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttca 654 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||| Sbjct: 655 ggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaat 714 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 244 |||||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 715 ccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 773 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 272 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 331 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 332 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 391 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 392 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 451 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 452 atgaagactggttccttctacggttag 478 || |||||||| |||||||| |||||| Sbjct: 981 atcaagactggatccttctatggttag 1007 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 559 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 618 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1076 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1135 Query: 619 agctgcctttacac 632 |||||||| ||||| Sbjct: 1136 agctgcctgtacac 1149
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 149 bits (75), Expect = 1e-32 Identities = 198/239 (82%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||| Sbjct: 729 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 788 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 ||||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| Sbjct: 789 agaagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttca 848 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 | ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||| Sbjct: 849 ggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaat 908 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 244 |||||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 909 ccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 272 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 331 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 332 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 391 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 392 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 451 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 452 atgaagactggttccttcta 471 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 559 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 618 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1232 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1291 Query: 619 agctgcctttacac 632 |||||||| ||||| Sbjct: 1292 agctgcctgtacac 1305
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 2716 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 2775 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctg 111 |||||||||||||||||||| |||||||| |||||||| Sbjct: 2776 tactgggctcccacccgtgaggaccgtattggtgtctg 2813
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 1088 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 1147 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctg 111 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1148 tactgggctcccacccgtgaggaccgtattggtgtctg 1185 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Plus Query: 162 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 221 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 222 acgacgatga 231 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 129 bits (65), Expect = 1e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||| Sbjct: 455 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 514 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 515 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 574 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||| ||| || ||| |||||| || | |||||||||||||| || || | Sbjct: 575 gcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagt 634 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 234 |||| ||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 635 ccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 431 ggtgatgctaaccaggatgcgatgaagactggttccttct 470 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||| |||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 913 gtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaa 972 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 || |||||||||||||| ||| | || |||||||| ||||||||||||||||| ||| | Sbjct: 973 aaattctactgggctcctaccagggaagaccgtattggtgtctgcaagggtattttcagg 1032 Query: 128 accgacaatgt 138 || |||||||| Sbjct: 1033 actgacaatgt 1043 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 401 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 450 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 123 bits (62), Expect = 8e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 |||||||||||||||||||| || | ||||||||||| |||||||| |||||||||||| Sbjct: 929 gtcaccggtaacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggag 988 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 113 ||||||||||||||||||||||| || || ||||| || ||||||| Sbjct: 989 aagttctactgggctcccacccgcgaagatcgtattggagtctgca 1034 Score = 56.0 bits (28), Expect = 2e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 431 ggtgatgctaac 442 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.62 Identities = 64/78 (82%) Strand = Plus / Plus Query: 167 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 226 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 227 gatgaggtgcgcaagtgg 244 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 121 bits (61), Expect = 3e-24 Identities = 187/229 (81%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||| Sbjct: 850 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 909 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 910 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 969 Query: 126 agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 185 |||||| ||| || ||| |||||| || | |||||||||||||| || || | Sbjct: 970 gcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagt 1029 Query: 186 ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 234 |||| || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 1030 ccatcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 431 ggtgatgctaaccaggatgcgatgaagactggttccttct 470 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small isoform precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 93 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 5 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 64 Query: 608 gcgacgacggcagctgcctttacaccttt 636 ||||||||||||||||||||||||||||| Sbjct: 65 gcgacgacggcagctgcctttacaccttt 93
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 111 bits (56), Expect = 3e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||| Sbjct: 850 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 909 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 910 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 969 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 311 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 370 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 371 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 430 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 431 ggtgatgctaaccaggatgcgatgaagactggttccttct 470 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 109 bits (55), Expect = 1e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 |||||||||||||| ||||| ||||| ||||| ||||| || || || || || || || Sbjct: 392 atcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgc 451 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||| Sbjct: 452 atggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatc 511 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||| |||||| ||| |||||| |||||| || |||||||| ||||||| || Sbjct: 512 ttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggc 571 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 228 || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 572 cagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 109 bits (55), Expect = 1e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 2 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 61 |||||||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || Sbjct: 400 atcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgc 459 Query: 62 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 121 ||||| |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||| Sbjct: 460 atggacaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatc 519 Query: 122 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 181 |||| |||||| ||| |||||| |||||| || |||||||| ||||||| || Sbjct: 520 ttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggc 579 Query: 182 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 228 || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 580 cagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 626
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 |||||||||||||||||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 913 gtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatggag 972 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 ||||| |||||||| |||||| | || || | |||||||| |||| ||||| ||| | Sbjct: 973 aagttttactgggcacccaccagggaagataggatcggtgtttgcacaggtattttcagg 1032 Query: 128 accgacaatgt 138 ||||||||||| Sbjct: 1033 accgacaatgt 1043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 gacaccttcccaggacaatccattgactttttcggtgctctg 208 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 107 bits (54), Expect = 5e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||||||||| |||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 351 gtcaccggtaatgatttctcaacactttatgctcctctcatccgtgatggtcgtatggag 410 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 113 ||||||||||||||||| || | || || ||||| |||||||||| Sbjct: 411 aagttctactgggctcctactagagaagatcgtattggtgtctgca 456 Score = 48.1 bits (24), Expect = 0.039 Identities = 75/92 (81%) Strand = Plus / Plus Query: 155 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 214 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 215 cgggtgtacgacgatgaggtgcgcaagtgggt 246 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 38 gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 97 |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 147 gctcctctcatccgtgatggtcgtatggagaaattctactgggcacccactcgtgaggac 206 Query: 98 cgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 139 ||||| ||||| |||| ||||||||| ||| ||||||||| Sbjct: 207 cgtattggtgtttgcactggtatcttcaggactgacaatgtc 248
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 918 gtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtatggag 977 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 |||||||||||||| || || | || ||||| || ||||| |||||||| || |||| | Sbjct: 978 aagttctactgggcaccaacaagggaagaccgcattggtgtttgcaagggaattttccgg 1037 Query: 128 accga 132 ||||| Sbjct: 1038 accga 1042
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 469 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 416 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 475 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 476 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 103 bits (52), Expect = 8e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||| Sbjct: 414 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 473 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 103 bits (52), Expect = 8e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| |||||||||||||| || || || |||||||| |||||||| |||||||||| Sbjct: 726 tcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatgg 785 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||| || |||||||| || || | ||||||||||||||||| ||||| ||||| ||| Sbjct: 786 agaaattttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggtattttca 845 Query: 126 agaccgac 133 ||||||| Sbjct: 846 ggaccgac 853 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Plus Query: 162 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 221 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 222 acga 225 |||| Sbjct: 942 acga 945
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 103 bits (52), Expect = 8e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354 Query: 128 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 187 |||||||| || ||| || |||| || ||||| ||||| |||||||| |||||||| Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414 Query: 188 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 235 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 415 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 103 bits (52), Expect = 8e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 1 gatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcg 60 |||| ||||||| ||||| || |||||||| | ||||||||||| || ||||||||||| Sbjct: 749 gatcatcgtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcg 808 Query: 61 tatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtat 120 ||||||||| ||||||||||| |||||| | || ||||| || |||||||||| ||||| Sbjct: 809 tatggagaaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtat 868 Query: 121 cttc 124 |||| Sbjct: 869 cttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 103 bits (52), Expect = 8e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 1 gatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcg 60 |||| ||||||| ||||| || |||||||| | ||||||||||| || ||||||||||| Sbjct: 922 gatcatcgtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcg 981 Query: 61 tatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtat 120 ||||||||| ||||||||||| |||||| | || ||||| || |||||||||| ||||| Sbjct: 982 tatggagaaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtat 1041 Query: 121 cttc 124 |||| Sbjct: 1042 cttc 1045
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence Length = 234 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||| |||||| ||||||||||| |||||||||||| |||| Sbjct: 41 tgcctgtgccggaaggttgacccgaccctgttgccaagaacttcgacccaacggcgagga 100 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 |||||||||||||||||||||| | |||||||||| Sbjct: 101 gcgacgacggcagctgcctttaaaacttttaagca 135
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||||||||| |||||||| || | || ||||| || ||||||||||||||||||||| Sbjct: 38 gtcaccggtaatgatttctccaccttgtatgctccccttatccgtgatggtcgtatggag 97 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 113 || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 98 aaattctactgggcaccaacccgcgacgatcgtattggtgtctgca 143
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| |||||||||||||| || || || |||||||| |||||||| |||||||||| Sbjct: 725 tcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatgg 784 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 |||| || |||||||| || || | ||||||||| ||||||| ||||| ||||| ||| Sbjct: 785 agaaattttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttca 844 Query: 126 agaccgac 133 ||||||| Sbjct: 845 ggaccgac 852 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Plus Query: 162 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 221 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 222 acga 225 |||| Sbjct: 941 acga 944
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 414 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 473 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 469 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 469 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 471 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||| Sbjct: 416 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 475 Query: 66 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 125 | |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 476 acaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||||||||| |||||||| ||||| || |||||||| || |||||||| ||||||||| Sbjct: 922 gtcaccggtaatgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggag 981 Query: 68 aagttctactgggc 81 |||||||||||||| Sbjct: 982 aagttctactgggc 995
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 87.7 bits (44), Expect = 5e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 147 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 206 Query: 66 agaagttctactgggc 81 |||||||||||||||| Sbjct: 207 agaagttctactgggc 222 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 155 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 204 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 87.7 bits (44), Expect = 5e-14 Identities = 182/228 (79%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 879 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 938 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 939 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 998 Query: 128 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 187 |||||||| || ||| || | || | ||||| ||||| |||||||| |||||||| Sbjct: 999 accgacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatct 1058 Query: 188 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 235 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 1059 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 87.7 bits (44), Expect = 5e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 907 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 966 Query: 66 agaagttctactgggc 81 |||||||||||||||| Sbjct: 967 agaagttctactgggc 982
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||| ||||| || | || || ||||| ||||||||||| ||||||||| Sbjct: 913 gtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatggag 972 Query: 68 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 114 || ||||||||||| |||||| | || |||||||| ||||||||||| Sbjct: 973 aaattctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 9.6 Identities = 68/84 (80%) Strand = Plus / Plus Query: 358 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 417 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 418 ccaggcagctctgggtgatgctaa 441 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 83.8 bits (42), Expect = 7e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || || ||||| || || |||||||| || || |||||||||| | Sbjct: 1748 ggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggagaagtac 1807 Query: 74 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 127 |||||| ||||||||||| ||||| ||||| ||||||| ||| ||||||||| Sbjct: 1808 tactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 371 gagcaggacaatgtcaagcgtgtgcagct 399 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949 Query: 68 aagttctactgggc 81 |||||||||||||| Sbjct: 950 aagttctactgggc 963
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 338 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 397 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 398 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 453 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| |||||| |||| ||||||||||| | || Sbjct: 4541319 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 4541378 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 || ||||| ||| ||||||||||||||| |||||| Sbjct: 4541379 gcaacgacagcatctgcctttacaccttctaagca 4541413
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 548 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 607 |||| |||||||||||||||||||||| |||||| |||| ||||||||||| | || Sbjct: 84693 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 84752 Query: 608 gcgacgacggcagctgcctttacaccttttaagca 642 || ||||| ||| ||||||||||||||| |||||| Sbjct: 84753 gcaacgacagcatctgcctttacaccttctaagca 84787
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| |||||||||||||| || | || || ||||| ||||||||||||||||||||| Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985 Query: 68 aagttctactgggc 81 || ||||||||||| Sbjct: 986 aaattctactgggc 999 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 155 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 208 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 6 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 65 ||||||| || ||||||||||| | || || ||||| || ||||| ||||||||||||| Sbjct: 341 tcgtcacaggaaacgatttctcagcactatatgctccccttatccgcgatggtcgtatgg 400 Query: 66 agaagttctactgggctcc 84 | ||||||||||||||||| Sbjct: 401 aaaagttctactgggctcc 419
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||||||||| || | |||| |||||| |||| |||||| ||||||||||||||| Sbjct: 919 ggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagttc 978 Query: 74 t--actgggctcccacccgtgacgaccgtatcggtgtctg 111 | ||||| || |||||||| ||||||||||||||||| Sbjct: 979 ttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 167 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 226 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 227 ga 228 || Sbjct: 2722 ga 2723
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 167 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 226 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 227 ga 228 || Sbjct: 1032 ga 1033
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 14 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 73 |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| || ||| Sbjct: 930 ggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattc 989 Query: 74 tactgggctcccacccgtgacgaccgtat 102 ||||||||||| || ||||| || ||||| Sbjct: 990 tactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 164 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 223 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 224 gacgatgaggtgcgcaagtggg 245 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 933 aagttctactgg 944
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 8 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 67 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 68 aagttctactgg 79 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 45 tgatccgtgatggtcgtatggagaagttctactgg 79 |||| |||||||| ||||||||||||||||||||| Sbjct: 644 tgattcgtgatgggcgtatggagaagttctactgg 678
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 17 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 76 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 77 tgg 79 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 38 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 81 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 38 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 81 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 50 cgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 96 |||||||| |||||||| || ||||||||||| || || |||||||| Sbjct: 6938 cgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 agccaggcagctctgggtgatg 437 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 caagatcgtcgacaccttccc 177 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 646 cacttttaatatctgatgttt 666 ||||||||||||||||||||| Sbjct: 3040420 cacttttaatatctgatgttt 3040440
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 2.4 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 8 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 66 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 67 gaagttctactgg 79 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 495 acccaccatctcttgctgcat 515 ||||||||||||||||||||| Sbjct: 63550 acccaccatctcttgctgcat 63530
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 646 cacttttaatatctgatgttt 666 ||||||||||||||||||||| Sbjct: 3040365 cacttttaatatctgatgttt 3040385
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 cacttttaatatctgatgttt 666 ||||||||||||||||||||| Sbjct: 114423 cacttttaatatctgatgttt 114403
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ggtgtctgcaagggtatcttccag 127 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 262062 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tgcataggaggaggtaaagg 530 |||||||||||||||||||| Sbjct: 46378 tgcataggaggaggtaaagg 46359
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18, and complete cds Length = 16432 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tgcataggaggaggtaaagg 530 |||||||||||||||||||| Sbjct: 1656 tgcataggaggaggtaaagg 1637
>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence Length = 202128 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tgcataggaggaggtaaagg 530 |||||||||||||||||||| Sbjct: 32964 tgcataggaggaggtaaagg 32945
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 agcgtgtgcagcttgctgac 406 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 agtgacgagtctgtcgtcaa 159 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 642 atgccacttttaatatctga 661 |||||||||||||||||||| Sbjct: 141077 atgccacttttaatatctga 141058
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 642 atgccacttttaatatctga 661 |||||||||||||||||||| Sbjct: 142583 atgccacttttaatatctga 142564
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 642 atgccacttttaatatctga 661 |||||||||||||||||||| Sbjct: 95911 atgccacttttaatatctga 95930
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 caggagcaggacaatgtcaa 387 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, section 128 of 469 of the complete genome Length = 11388 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 606 gagcgacgacggcagctgcctttacacc 633 |||||||||||||||| |||| |||||| Sbjct: 5133 gagcgacgacggcagcagcctgtacacc 5160
>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 176974 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tgcataggaggaggtaaagg 530 |||||||||||||||||||| Sbjct: 34681 tgcataggaggaggtaaagg 34662
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 tacaccttttaagcatgcca 647 |||||||||||||||||||| Sbjct: 78254 tacaccttttaagcatgcca 78235
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cgtgacgaccgtatcggtgt 108 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 caggagcaggacaatgtcaa 387 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tgagccaggcagctctgggtgatg 437 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle) (predicted) (Lmod1_predicted), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gaggaggtaaaggagcacagcaag 541 |||||||||||||||| ||||||| Sbjct: 625 gaggaggtaaaggagcccagcaag 648
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence Length = 158595 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 tgcataggaggaggtaaagg 530 |||||||||||||||||||| Sbjct: 27736 tgcataggaggaggtaaagg 27755
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 639 agcatgccacttttaatatctgat 662 |||||| ||||||||||||||||| Sbjct: 127852 agcatggcacttttaatatctgat 127875 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,285,019 Number of Sequences: 3902068 Number of extensions: 4285019 Number of successful extensions: 76534 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76030 Number of HSP's gapped (non-prelim): 437 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
