ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 375 e-100
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 375 e-100
3dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
4gb|AY109490.1| Zea mays CL920_1 mRNA sequence 339 7e-90
5ref|NM_190647.1| Oryza sativa (japonica cultivar-group), predic... 232 1e-57
6gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA,... 232 1e-57
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
8gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine... 232 1e-57
9dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
10dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
11gb|AY109565.1| Zea mays CL896_1 mRNA sequence 145 2e-31
12gb|AY111944.1| Zea mays CL896_2 mRNA sequence 137 5e-29
13gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence 131 3e-27
14gb|AY423550.1| Lycopersicon esculentum coronatine-insensitive 1 ... 48 0.037
15gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 ... 48 0.037
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.15
17gb|AF536527.1| Glycine max putative coronatine-insensitive 1 (CO... 46 0.15
18gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 46 0.15
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
20gb|BT009618.1| Triticum aestivum clone wre1n.pk0122.d3:fis, full... 44 0.58
21emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, compl... 44 0.58
22gb|AY109486.1| Zea mays CL529_1 mRNA sequence 44 0.58
23gb|AE014075.1| Escherichia coli CFT073, complete genome 42 2.3
24gb|CP000243.1| Escherichia coli UTI89, complete genome 42 2.3
25gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 42 2.3
26gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 42 2.3
27gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 9.1
28ref|NM_129552.2| Arabidopsis thaliana COI1 (CORONATINE INSENSITI... 40 9.1
29gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 a... 40 9.1
30gb|AC126023.3| Mus musculus BAC clone RP24-422I18 from chromosom... 40 9.1
31gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q... 40 9.1
32gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, com... 40 9.1
33emb|CR396586.7| Zebrafish DNA sequence from clone DKEY-184A18 in... 40 9.1
34gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosom... 40 9.1
35gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 9.1
36emb|BX324006.19| Zebrafish DNA sequence from clone DKEY-46M10 in... 40 9.1
37emb|CR388122.9| Zebrafish DNA sequence from clone CH211-261F7 in... 40 9.1
38gb|AY133556.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, co... 40 9.1
39dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 9.1
40gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 ma... 40 9.1
41gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, com... 40 9.1
42gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 9.1
43gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosom... 40 9.1
44gb|AY045625.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, co... 40 9.1
45emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 i... 40 9.1
46gb|AC016724.11| Homo sapiens BAC clone RP11-339F22 from 2, compl... 40 9.1
47gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14... 40 9.1
48gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7... 40 9.1
49gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence 40 9.1
50gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 9.1
51gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, co... 40 9.1
52gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome... 40 9.1
53gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 9.1
54emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in ... 40 9.1
55emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in... 40 9.1
56gb|AY944686.1| Homo sapiens interleukin 1 family, member 6 (epsi... 40 9.1
57tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete int... 40 9.1
58emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-5... 40 9.1
59gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq... 40 9.1
60gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 9.1
61emb|BX248384.10| Zebrafish DNA sequence from clone CH211-233C3 i... 40 9.1
62gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 9.1
63gb|AF036340.1|AF036340 Arabidopsis thaliana LRR-containing F-box... 40 9.1
64gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 9.1
65dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 9.1
66gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 9.1
67emb|AL352979.4|CNS05TBZ Human chromosome 14 DNA sequence BAC R-3... 40 9.1
68gb|CP000036.1| Shigella boydii Sb227, complete genome 40 9.1
69gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 9.1

>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score =  375 bits (189), Expect = e-100
 Identities = 489/589 (83%)
 Strand = Plus / Plus

                                                                         
Query: 34    ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93
             ||||||||||| ||||  ||||| || |||||||| || || ||| ||||||||||||||
Sbjct: 36914 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 36973

                                                                         
Query: 94    gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153
             ||||||||  | |||||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct: 36974 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 37033

                                                                         
Query: 154   ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213
             || ||||||||| ||||||||||||| |||||||||   ||||||  |||||||||||||
Sbjct: 37034 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 37093

                                                                         
Query: 214   cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273
              ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| ||  | 
Sbjct: 37094 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 37153

                                                                         
Query: 274   atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333
             ||| | ||||||   |||||   |||||||| |||||||||  ||||||| || ||||||
Sbjct: 37154 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 37213

                                                                         
Query: 334   agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393
             || ||||  ||||| |||| |||  ||| ||  |||||||| ||||| ||||| ||||| 
Sbjct: 37214 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 37273

                                                                         
Query: 394   cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453
             ||||||||||  || ||| | ||||| | ||| |||||||||||||| ||||||||||||
Sbjct: 37274 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcccttctgg 37333

                                                                         
Query: 454   aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513
             ||||| |||||||| |||||| |  | ||||  ||   |||  |||  |||||||| || 
Sbjct: 37334 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 37393

                                                                         
Query: 514   ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573
             || ||||| ||||| ||||||||| ||||||||||||||||||||   |||| |||||||
Sbjct: 37394 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 37453

                                                              
Query: 574   gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622
             |||||||| |  ||||| |||||| ||||||||||||||||||| ||||
Sbjct: 37454 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 37502



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  375 bits (189), Expect = e-100
 Identities = 489/589 (83%)
 Strand = Plus / Plus

                                                                            
Query: 34       ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93
                ||||||||||| ||||  ||||| || |||||||| || || ||| ||||||||||||||
Sbjct: 21917700 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 21917759

                                                                            
Query: 94       gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153
                ||||||||  | |||||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct: 21917760 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 21917819

                                                                            
Query: 154      ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213
                || ||||||||| ||||||||||||| |||||||||   ||||||  |||||||||||||
Sbjct: 21917820 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 21917879

                                                                            
Query: 214      cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273
                 ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| ||  | 
Sbjct: 21917880 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 21917939

                                                                            
Query: 274      atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333
                ||| | ||||||   |||||   |||||||| |||||||||  ||||||| || ||||||
Sbjct: 21917940 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 21917999

                                                                            
Query: 334      agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393
                || ||||  ||||| |||| |||  ||| ||  |||||||| ||||| ||||| ||||| 
Sbjct: 21918000 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 21918059

                                                                            
Query: 394      cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453
                ||||||||||  || ||| | ||||| | ||| |||||||||||||| ||||||||||||
Sbjct: 21918060 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcccttctgg 21918119

                                                                            
Query: 454      aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513
                ||||| |||||||| |||||| |  | ||||  ||   |||  |||  |||||||| || 
Sbjct: 21918120 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 21918179

                                                                            
Query: 514      ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573
                || ||||| ||||| ||||||||| ||||||||||||||||||||   |||| |||||||
Sbjct: 21918180 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 21918239

                                                                 
Query: 574      gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622
                |||||||| |  ||||| |||||| ||||||||||||||||||| ||||
Sbjct: 21918240 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 21918288



to top

>dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F05, full
            insert sequence
          Length = 2305

 Score =  367 bits (185), Expect = 3e-98
 Identities = 488/589 (82%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93
            ||||||||||| ||||  ||||| || |||||||| || || ||| ||||||||||||||
Sbjct: 1430 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 1489

                                                                        
Query: 94   gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153
            ||||||||  | |||||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct: 1490 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 1549

                                                                        
Query: 154  ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213
            || ||||||||| ||||||||||||| |||||||||   ||||||  |||||||||||||
Sbjct: 1550 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 1609

                                                                        
Query: 214  cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273
             ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| ||  | 
Sbjct: 1610 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 1669

                                                                        
Query: 274  atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333
            ||| | ||||||   |||||   |||||||| |||||||||  ||||||| || ||||||
Sbjct: 1670 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 1729

                                                                        
Query: 334  agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393
            || ||||  ||||| |||| |||  ||| ||  |||||||| ||||| ||||| ||||| 
Sbjct: 1730 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 1789

                                                                        
Query: 394  cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453
            ||||||||||  || ||| | ||||| | ||| |||||||||||||| |||| |||||||
Sbjct: 1790 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcgcttctgg 1849

                                                                        
Query: 454  aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513
            ||||| |||||||| |||||| |  | ||||  ||   |||  |||  |||||||| || 
Sbjct: 1850 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 1909

                                                                        
Query: 514  ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573
            || ||||| ||||| ||||||||| ||||||||||||||||||||   |||| |||||||
Sbjct: 1910 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 1969

                                                             
Query: 574  gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622
            |||||||| |  ||||| |||||| ||||||||||||||||||| ||||
Sbjct: 1970 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 2018



to top

>gb|AY109490.1| Zea mays CL920_1 mRNA sequence
          Length = 2298

 Score =  339 bits (171), Expect = 7e-90
 Identities = 501/613 (81%)
 Strand = Plus / Plus

                                                                        
Query: 20   aatctatcggaacattctgcaaaaagctttatgactttcgccttgtcctgcttgacagac 79
            |||||||||| |||||||||      || || ||||| || ||||| || ||||| ||| 
Sbjct: 1412 aatctatcgggacattctgcnnnnnnctatacgacttccggcttgttctacttgatagag 1471

                                                                        
Query: 80   aagagaggataacagatttgccactggacaatggtgcccgtgcgctgctgaggggctgca 139
            |||||||||||||||| ||||||||||||||||||| ||| ||  || ||||||||||||
Sbjct: 1472 aagagaggataacagacttgccactggacaatggtgtccgagctttgttgaggggctgca 1531

                                                                        
Query: 140  ctaaacttcggaggttcgctctatacctgagaccagggggcctttcagatgtgggcctta 199
            | || ||||||||||| ||||| ||| |||||||||| || || |||||||  || ||  
Sbjct: 1532 ccaagcttcggaggtttgctctgtacttgagaccaggagggctctcagatgcaggtctcg 1591

                                                                        
Query: 200  actatattggacagcacagtggaactatccactacatgcttctgggtaacgttgggcaaa 259
             ||| |||||||||  ||| ||||  ||||| ||||||||||| ||||| |||||| |||
Sbjct: 1592 gctacattggacagtgcagcggaaacatccagtacatgcttctcggtaatgttggggaaa 1651

                                                                        
Query: 260  cggatgacggattaatcagttttgcagctgggtgccggaacctgctgaagcttgaattaa 319
            | ||||| ||||| ||||| || |||   || |||   |||||||  ||||||||| | |
Sbjct: 1652 ctgatgatggattgatcagcttcgcattgggttgcgtaaacctgcgaaagcttgaactca 1711

                                                                        
Query: 320  ggagctgctgcttcagcgagcgggctttggccctcgccgtactgaaaatgccttctctga 379
            |||| ||||||||||||||||| ||  ||||||| ||  ||||  | |||||||| ||||
Sbjct: 1712 ggagttgctgcttcagcgagcgagcactggcccttgcaatactacatatgccttccctga 1771

                                                                        
Query: 380  ggtacgtatgggtgcagggctacagagcctctcaaactggccgcgacctcatgctcatgg 439
            ||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||||||
Sbjct: 1772 ggtacgtatgggttcagggctacaaagcgtctcaaaccggccgagacctcatgctcatgg 1831

                                                                        
Query: 440  caaggcccttctggaacattgagtttacgcctcccggcacggagagcgcgggtcggctga 499
            ||||||||||||||||||| |||||||| ||||||    |  ||| ||  ||| ||||||
Sbjct: 1832 caaggcccttctggaacatagagtttacacctcccaatcctaagaacggaggttggctga 1891

                                                                        
Query: 500  tggaagatggggagccctgtgttgataggcaagctcaggtacttgcatactactccctta 559
            |||||||||||||||| ||||| ||||| || |||||| ||||||||||| |||||||  
Sbjct: 1892 tggaagatggggagccttgtgtagatagtcacgctcagatacttgcataccactccctcg 1951

                                                                        
Query: 560  gtgggaggaggtcggactgcccgcagtctgttgttcctctgtatcctgcgtgactgtaca 619
              || | ||||  ||||||||| || || || |||||| |||||||||||||| |||| |
Sbjct: 1952 ccggtaagaggctggactgcccacaatccgtggttcctttgtatcctgcgtgagtgtaaa 2011

                         
Query: 620  tacacaaagctgg 632
            || || |||||||
Sbjct: 2012 tagactaagctgg 2024



to top

>ref|NM_190647.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1893

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
            ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 1315 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1373

                                                                        
Query: 93   agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
            |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 1374 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1433

                                                                        
Query: 153  gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
            ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 1434 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1493

                                                                        
Query: 213  gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
            | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 1494 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1553

                                                                        
Query: 273  aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
             ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 1554 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1613

                                                                        
Query: 333  cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
            ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 1614 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1673

                                                                        
Query: 393  gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
            ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 1674 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1733

                                 
Query: 453  gaacattgagtttacgcctcc 473
            |||||| |||||||| |||||
Sbjct: 1734 gaacatcgagtttacacctcc 1754



to top

>gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA, complete cds
          Length = 2088

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
            ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 1275 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1333

                                                                        
Query: 93   agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
            |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 1334 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1393

                                                                        
Query: 153  gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
            ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 1394 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1453

                                                                        
Query: 213  gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
            | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 1454 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1513

                                                                        
Query: 273  aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
             ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 1514 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1573

                                                                        
Query: 333  cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
            ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 1574 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1633

                                                                        
Query: 393  gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
            ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 1634 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1693

                                 
Query: 453  gaacattgagtttacgcctcc 473
            |||||| |||||||| |||||
Sbjct: 1694 gaacatcgagtttacacctcc 1714



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
                ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 36743312 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 36743370

                                                                            
Query: 93       agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
                |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 36743371 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 36743430

                                                                            
Query: 153      gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
                ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 36743431 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 36743490

                                                                            
Query: 213      gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
                | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 36743491 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 36743550

                                                                            
Query: 273      aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
                 ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 36743551 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 36743610

                                                                            
Query: 333      cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
                ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 36743611 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 36743670

                                                                            
Query: 393      gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
                ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 36743671 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 36743730

                                     
Query: 453      gaacattgagtttacgcctcc 473
                |||||| |||||||| |||||
Sbjct: 36743731 gaacatcgagtttacacctcc 36743751



to top

>gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine-insensitive 1 mRNA,
            complete cds
          Length = 1893

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
            ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 1315 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1373

                                                                        
Query: 93   agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
            |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 1374 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1433

                                                                        
Query: 153  gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
            ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 1434 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1493

                                                                        
Query: 213  gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
            | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 1494 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1553

                                                                        
Query: 273  aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
             ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 1554 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1613

                                                                        
Query: 333  cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
            ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 1614 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1673

                                                                        
Query: 393  gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
            ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 1674 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1733

                                 
Query: 453  gaacattgagtttacgcctcc 473
            |||||| |||||||| |||||
Sbjct: 1734 gaacatcgagtttacacctcc 1754



to top

>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
             ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 69627 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 69685

                                                                         
Query: 93    agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
             |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 69686 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 69745

                                                                         
Query: 153   gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
             ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 69746 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 69805

                                                                         
Query: 213   gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
             | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 69806 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 69865

                                                                         
Query: 273   aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
              ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 69866 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 69925

                                                                         
Query: 333   cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
             ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 69926 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 69985

                                                                         
Query: 393   gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
             ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 69986 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 70045

                                  
Query: 453   gaacattgagtttacgcctcc 473
             |||||| |||||||| |||||
Sbjct: 70046 gaacatcgagtttacacctcc 70066



to top

>dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A10, full
            insert sequence
          Length = 2163

 Score =  232 bits (117), Expect = 1e-57
 Identities = 362/441 (82%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92
            ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| ||||
Sbjct: 1291 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1349

                                                                        
Query: 93   agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152
            |||| ||||||| |||||||||| | |||| ||| | ||    ||||| || ||||||||
Sbjct: 1350 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1409

                                                                        
Query: 153  gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212
            ||| ||||| ||||| |||||||| || ||||||||||  ||||||| ||| || |||||
Sbjct: 1410 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1469

                                                                        
Query: 213  gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272
            | ||||||||| |||||| |||||||| ||||| || |||||  || | ||  | |||||
Sbjct: 1470 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1529

                                                                        
Query: 273  aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332
             ||| |||| ||||  || |||   ||||| | |||||||||||| || |||||||||||
Sbjct: 1530 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1589

                                                                        
Query: 333  cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392
            ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| |||||||
Sbjct: 1590 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1649

                                                                        
Query: 393  gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452
            ||| || |||||||| |||||||| ||||  |||||| |||||||||| ||||| |||||
Sbjct: 1650 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1709

                                 
Query: 453  gaacattgagtttacgcctcc 473
            |||||| |||||||| |||||
Sbjct: 1710 gaacatcgagtttacacctcc 1730



to top

>gb|AY109565.1| Zea mays CL896_1 mRNA sequence
          Length = 2190

 Score =  145 bits (73), Expect = 2e-31
 Identities = 433/553 (78%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93
            |||||||| || || ||||| || || ||||| || ||||||| |||  ||| |||||||
Sbjct: 1382 ttctgcaagaatctatatgatttccggcttgttctacttgacaaacagaagaagataaca 1441

                                                                        
Query: 94   gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153
            ||  ||||||| ||||| || | |||||| || ||||||  ||||   ||||||||||||
Sbjct: 1442 gacctgccacttgacaacggcgtccgtgccctactgaggaactgcgtcaaacttcggagg 1501

                                                                        
Query: 154  ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213
            || ||  | ||||||||||| || || |||||||| || |||||    || |||||||  
Sbjct: 1502 tttgccttctacctgagaccgggagggctttcagacgtaggcctcggttacattggacta 1561

                                                                        
Query: 214  cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273
             ||||||| |  ||||| |||||||| || || ||||||||  || | ||  ||||||| 
Sbjct: 1562 tacagtgggaacatccaatacatgctgctcggcaacgttggtgaatctgacaacggattg 1621

                                                                        
Query: 274  atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333
            |||   |||||| | || |||   ||||||| |||||| ||  | ||| |||||||||||
Sbjct: 1622 atccagtttgcaacgggatgcaccaacctgcggaagctcgagctgaggggctgctgcttc 1681

                                                                        
Query: 334  agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393
            |||||||| ||| ||||  | ||||| ||  | ||||| || ||||||||| ||||||||
Sbjct: 1682 agcgagcgagctctggcagtggccgtgctccagatgccctcgctgaggtacatatgggtg 1741

                                                                        
Query: 394  cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453
            ||||| ||||||||||||| ||| ||||  ||||||||||||||||| ||||| | ||||
Sbjct: 1742 caggggtacagagcctctcgaacgggccaggacctcatgctcatggccaggccgtactgg 1801

                                                                        
Query: 454  aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513
            |||||||| ||  ||||||||    | ||||||||   |||| |||||| ||||||  ||
Sbjct: 1802 aacattgaattcgcgcctcccattcccgagagcgcttatcgggtgatggcagatggacag 1861

                                                                        
Query: 514  ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573
            || |||||||| |  || || ||||| ||||| || |||||||||  ||| |||||| ||
Sbjct: 1862 ccttgtgttgacacccatgcccaggtccttgcgtattactcccttgctggaaggaggccg 1921

                         
Query: 574  gactgcccgcagt 586
            |||||||| ||||
Sbjct: 1922 gactgccctcagt 1934



to top

>gb|AY111944.1| Zea mays CL896_2 mRNA sequence
          Length = 579

 Score =  137 bits (69), Expect = 5e-29
 Identities = 261/325 (80%)
 Strand = Plus / Plus

                                                                       
Query: 298 aacctgctgaagcttgaattaaggagctgctgcttcagcgagcgggctttggccctcgcc 357
           ||||||| |||||| ||  | ||| ||||||||||||||||||||||  ||||  | |||
Sbjct: 43  aacctgcggaagctggagctgaggggctgctgcttcagcgagcgggccctggcggtggcc 102

                                                                       
Query: 358 gtactgaaaatgccttctctgaggtacgtatgggtgcagggctacagagcctctcaaact 417
           || ||  | ||||| || ||||||||||||||||||||||| ||||| |||||||| || 
Sbjct: 103 gtgctccagatgccctcgctgaggtacgtatgggtgcaggggtacagggcctctcagacg 162

                                                                       
Query: 418 ggccgcgacctcatgctcatggcaaggcccttctggaacattgagtttacgcctcccggc 477
           ||||| ||||||||||||||||| ||||| | ||||||||| |||||   ||||||| | 
Sbjct: 163 ggccgggacctcatgctcatggccaggccgtactggaacatcgagttcgtgcctccccgt 222

                                                                       
Query: 478 acggagagcgcgggtcggctgatggaagatggggagccctgtgttgataggcaagctcag 537
            | ||||||||| ||||| ||||||  |||||  |||| ||||| || |  || ||||||
Sbjct: 223 cccgagagcgcgtgtcgggtgatggcggatggacagccttgtgtcgacacccatgctcag 282

                                                                       
Query: 538 gtacttgcatactactcccttagtgggaggaggtcggactgcccgcagtctgttgttcct 597
           || || || ||||| |||||   ||| |||||| ||||||| |||| ||   | ||| ||
Sbjct: 283 gttctcgcgtactattccctcgctggaaggaggccggactgtccgcggtggctcgttact 342

                                    
Query: 598 ctgtatcctgcgtgactgtacatac 622
            || |||||||||||||||| ||||
Sbjct: 343 ttgcatcctgcgtgactgtagatac 367



to top

>gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence
          Length = 1411

 Score =  131 bits (66), Expect = 3e-27
 Identities = 231/286 (80%)
 Strand = Plus / Plus

                                                                        
Query: 298  aacctgctgaagcttgaattaaggagctgctgcttcagcgagcgggctttggccctcgcc 357
            ||||||| |||||| ||  | ||| ||||||||||||||||||||||  ||||  | |||
Sbjct: 774  aacctgcggaagctggagctgaggggctgctgcttcagcgagcgggccctggcggtggcc 833

                                                                        
Query: 358  gtactgaaaatgccttctctgaggtacgtatgggtgcagggctacagagcctctcaaact 417
            || ||  | ||||| || ||||||||||||||||||||||| ||||| |||||||| || 
Sbjct: 834  gtgctccagatgccctcgctgaggtacgtatgggtgcaggggtacagggcctctcagacg 893

                                                                        
Query: 418  ggccgcgacctcatgctcatggcaaggcccttctggaacattgagtttacgcctcccggc 477
            ||||| ||||||||||||||||| ||||| | ||||||||| |||||   ||||||| | 
Sbjct: 894  ggccgggacctcatgctcatggccaggccgtactggaacatcgagttcgtgcctccccgt 953

                                                                        
Query: 478  acggagagcgcgggtcggctgatggaagatggggagccctgtgttgataggcaagctcag 537
             | ||||||||| ||||| ||||||  |||||  |||| ||||| || |  || ||||||
Sbjct: 954  cccgagagcgcgtgtcgggtgatggcggatggacagccttgtgtcgacacccatgctcag 1013

                                                          
Query: 538  gtacttgcatactactcccttagtgggaggaggtcggactgcccgc 583
            || || || ||||| |||||   ||| |||||| ||||||| ||||
Sbjct: 1014 gttctcgcgtactattccctcgctggaaggaggccggactgtccgc 1059



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 88  ataacagatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaactt 147
           ||||| ||| |||| |||||||| |||| ||| || || |||||| |||| || || |||
Sbjct: 564 ataacggatctgccgctggacaacggtgtccgagctctactgaggagctgtaccaagctt 623

                                     
Query: 148 cggaggttcgctctatacctgagacc 173
           ||| |||||||  | |||||||||||
Sbjct: 624 cggcggttcgccttgtacctgagacc 649



to top

>gb|AY423550.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) mRNA,
            complete cds
          Length = 2030

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 68   tgcttgacagacaagagaggataacagatttgccactggacaatggtg 115
            ||||||||||| |||| || ||||||||| ||||||| || |||||||
Sbjct: 1388 tgcttgacagagaagaaagaataacagatctgccacttgataatggtg 1435



to top

>gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) gene,
            complete cds
          Length = 9377

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 68   tgcttgacagacaagagaggataacagatttgccactggacaatggtg 115
            ||||||||||| |||| || ||||||||| ||||||| || |||||||
Sbjct: 5249 tgcttgacagagaagaaagaataacagatctgccacttgataatggtg 5296



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 78       acaagagaggataacagatttgccactggac 108
                ||||| || ||||||||||||||||||||||
Sbjct: 26915670 acaagtgatgataacagatttgccactggac 26915700



to top

>gb|AF536527.1| Glycine max putative coronatine-insensitive 1 (COI1) gene, partial
           cds
          Length = 711

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 55  tttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaatgg 113
           |||||||||||  ||||||||    |||||| |||||| ||||||||||| ||||||||
Sbjct: 145 tttcgccttgtgttgcttgaccatgaagagaagataactgatttgccacttgacaatgg 203



to top

>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 78    acaagagaggataacagatttgccactggac 108
             ||||| || ||||||||||||||||||||||
Sbjct: 94670 acaagtgatgataacagatttgccactggac 94700



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 78       acaagagaggataacagatttgccactggac 108
                ||||| || ||||||||||||||||||||||
Sbjct: 27006993 acaagtgatgataacagatttgccactggac 27007023



to top

>gb|BT009618.1| Triticum aestivum clone wre1n.pk0122.d3:fis, full insert mRNA
           sequence
          Length = 1074

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 445 cccttctggaacattgagttta 466
           ||||||||||||||||||||||
Sbjct: 518 cccttctggaacattgagttta 539



to top

>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence
          Length = 313573

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 23     ctatcggaacattctgcaaaaa 44
              ||||||||||||||||||||||
Sbjct: 169061 ctatcggaacattctgcaaaaa 169082



to top

>gb|AY109486.1| Zea mays CL529_1 mRNA sequence
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                       
Query: 50  atgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggaca 109
           ||||||| ||||||||||| ||||| ||| |||     ||||| || |||||||||||||
Sbjct: 754 atgacttccgccttgtcctccttgatagagaagcacatataaccgaattgccactggaca 813

                                                         
Query: 110 atggtgcccgtgcgctgctgaggggctgcactaaacttcggaggtt 155
           |||| |  |||||  |||| || || ||||| ||||| ||||||||
Sbjct: 814 atggggttcgtgctttgcttagaggttgcaccaaactacggaggtt 859



to top

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 330     cttcagcgagcgggctttggc 350
               |||||||||||||||||||||
Sbjct: 1513142 cttcagcgagcgggctttggc 1513162



to top

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 330     cttcagcgagcgggctttggc 350
               |||||||||||||||||||||
Sbjct: 1348590 cttcagcgagcgggctttggc 1348610



to top

>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 499   atggaagatggggagccctgt 519
             |||||||||||||||||||||
Sbjct: 96453 atggaagatggggagccctgt 96433



to top

>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 499   atggaagatggggagccctgt 519
             |||||||||||||||||||||
Sbjct: 18219 atggaagatggggagccctgt 18199



to top

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1270154 cttcagcgagcgggctttgg 1270173



to top

>ref|NM_129552.2| Arabidopsis thaliana COI1 (CORONATINE INSENSITIVE 1);
            ubiquitin-protein ligase AT2G39940 (COI1) mRNA, complete
            cds
          Length = 2927

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 51   tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110
            |||||| ||||||||| | || ||| |  |||| ||||| |||||| |||||||||||||
Sbjct: 1480 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1539



to top

>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes,
              complete cds; and S171 gene, partial cds
          Length = 216387

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cagggggcctttcagatgtg 192
              ||||||||||||||||||||
Sbjct: 168931 cagggggcctttcagatgtg 168912



to top

>gb|AC126023.3| Mus musculus BAC clone RP24-422I18 from chromosome 16, complete
             sequence
          Length = 198296

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   atattggacagcacagtgga 222
             ||||||||||||||||||||
Sbjct: 37653 atattggacagcacagtgga 37672



to top

>gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q24.13, complete
             sequence
          Length = 198700

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   aggcccttctggaacattga 461
             ||||||||||||||||||||
Sbjct: 21771 aggcccttctggaacattga 21790



to top

>gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, complete sequence
          Length = 173236

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    caagagaggataacagatttgcca 102
             |||||||||| |||||||||||||
Sbjct: 46376 caagagaggagaacagatttgcca 46399



to top

>emb|CR396586.7| Zebrafish DNA sequence from clone DKEY-184A18 in linkage group 10,
              complete sequence
          Length = 225059

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 98     tgccactggacaatggtgcccgtgcgct 125
              |||||| ||||||||||||| |||||||
Sbjct: 211517 tgccacaggacaatggtgccagtgcgct 211490



to top

>gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosome 14, complete
             sequence
          Length = 178534

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   catgcttctgggtaacgttg 253
             ||||||||||||||||||||
Sbjct: 98767 catgcttctgggtaacgttg 98786



to top

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1273565 cttcagcgagcgggctttgg 1273584



to top

>emb|BX324006.19| Zebrafish DNA sequence from clone DKEY-46M10 in linkage group 16,
            complete sequence
          Length = 135340

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 98   tgccactggacaatggtgcccgtgcgct 125
            |||||| ||||||||||||| |||||||
Sbjct: 6196 tgccacaggacaatggtgccagtgcgct 6169



to top

>emb|CR388122.9| Zebrafish DNA sequence from clone CH211-261F7 in linkage group 20
             Contains the 5' end of the gene for a novel protein
             similar to vertebrate ectonucleotide
             pyrophosphatase/phosphodiesterase 5 (putative function)
             (ENPP5), a novel gene, the 3' end of the ccm2 gene for
             cerebral cavernous malformation 2 and a CpG island,
             complete sequence
          Length = 55981

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 98    tgccactggacaatggtgcccgtgcgct 125
             |||||| ||||||||||||| |||||||
Sbjct: 35539 tgccacaggacaatggtgccagtgcgct 35566



to top

>gb|AY133556.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, complete cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 51   tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110
            |||||| ||||||||| | || ||| |  |||| ||||| |||||| |||||||||||||
Sbjct: 1218 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1277



to top

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1275919 cttcagcgagcgggctttgg 1275938



to top

>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete
             sequence
          Length = 108847

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 51    tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110
             |||||| ||||||||| | || ||| |  |||| ||||| |||||| |||||||||||||
Sbjct: 42070 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 42011



to top

>gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, complete sequence
          Length = 158330

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   actgaaaatgccttctctga 379
             ||||||||||||||||||||
Sbjct: 89875 actgaaaatgccttctctga 89894



to top

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     ggctgcactaaacttcggag 152
               ||||||||||||||||||||
Sbjct: 4658544 ggctgcactaaacttcggag 4658563



to top

>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence
          Length = 194368

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    caagagaggataacagatttgcca 102
             |||||||||| |||||||||||||
Sbjct: 14356 caagagaggagaacagatttgcca 14333



to top

>gb|AY045625.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, complete cds
          Length = 2335

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 51   tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110
            |||||| ||||||||| | || ||| |  |||| ||||| |||||| |||||||||||||
Sbjct: 1418 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1477



to top

>emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 in linkage group 3,
             complete sequence
          Length = 183783

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 98    tgccactggacaatggtgcccgtgcgct 125
             |||||| ||||||||||||| |||||||
Sbjct: 61346 tgccacaggacaatggtgccagtgcgct 61373



to top

>gb|AC016724.11| Homo sapiens BAC clone RP11-339F22 from 2, complete sequence
          Length = 197308

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   catgctcatggcaaggccct 448
             ||||||||||||||||||||
Sbjct: 57492 catgctcatggcaaggccct 57473



to top

>gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14q24.3, complete sequence
          Length = 154616

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    cagggggcctttcagatgtg 192
              ||||||||||||||||||||
Sbjct: 105773 cagggggcctttcagatgtg 105792



to top

>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence
          Length = 120429

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   aactatattggacagcacag 218
             ||||||||||||||||||||
Sbjct: 67934 aactatattggacagcacag 67953



to top

>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence
          Length = 182644

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   aactatattggacagcacag 218
             ||||||||||||||||||||
Sbjct: 87748 aactatattggacagcacag 87767



to top

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1269869 cttcagcgagcgggctttgg 1269888



to top

>gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, complete sequence
          Length = 198899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   aggcccttctggaacattga 461
             ||||||||||||||||||||
Sbjct: 21772 aggcccttctggaacattga 21791



to top

>gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome 14, complete sequence
          Length = 192706

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    catgcttctgggtaacgttg 253
              ||||||||||||||||||||
Sbjct: 158849 catgcttctgggtaacgttg 158830



to top

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 589     gttgttcctctgtatcctgcgtgactgt 616
               ||||||| |||| |||||||||||||||
Sbjct: 2435543 gttgttcttctgcatcctgcgtgactgt 2435516



to top

>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7,
             complete sequence
          Length = 199752

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    gccactggacaatggtgcccgtgc 122
             ||||| ||||||||||||||||||
Sbjct: 63598 gccacaggacaatggtgcccgtgc 63621



to top

>emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in linkage group 17,
             complete sequence
          Length = 133128

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 98    tgccactggacaatggtgcccgtgcgct 125
             |||||| |||||| ||||||||||||||
Sbjct: 46744 tgccacaggacaacggtgcccgtgcgct 46717



to top

>gb|AY944686.1| Homo sapiens interleukin 1 family, member 6 (epsilon) (IL1F6) gene,
             complete cds
          Length = 19140

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   catgctcatggcaaggccct 448
             ||||||||||||||||||||
Sbjct: 12395 catgctcatggcaaggccct 12376



to top

>tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft
              Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN
              (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10
          Length = 495475

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    catgctcatggcaaggccct 448
              ||||||||||||||||||||
Sbjct: 299946 catgctcatggcaaggccct 299927



to top

>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190648

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 30     aacattctgcaaaaagctttatga 53
              |||||||||||||| |||||||||
Sbjct: 188348 aacattctgcaaaaggctttatga 188325



to top

>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence
          Length = 1332022

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    ggattaatcagttttgcagc 287
              ||||||||||||||||||||
Sbjct: 349791 ggattaatcagttttgcagc 349810



to top

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 589    gttgttcctctgtatcctgcgtgactgt 616
              ||||||| |||| |||||||||||||||
Sbjct: 482000 gttgttcttctgcatcctgcgtgactgt 482027



to top

>emb|BX248384.10| Zebrafish DNA sequence from clone CH211-233C3 in linkage group 8,
             complete sequence
          Length = 155293

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 98    tgccactggacaatggtgcccgtgcgct 125
             |||||| ||||||||||||| |||||||
Sbjct: 80594 tgccacaggacaatggtgccagtgcgct 80621



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 473    ccggcacggagagcgcgggtcggc 496
              ||||||||| ||||||||||||||
Sbjct: 444165 ccggcacggtgagcgcgggtcggc 444188



to top

>gb|AF036340.1|AF036340 Arabidopsis thaliana LRR-containing F-box protein (COI1) mRNA,
            complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 51   tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110
            |||||| ||||||||| | || ||| |  |||| ||||| |||||| |||||||||||||
Sbjct: 1480 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1539



to top

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1811624 cttcagcgagcgggctttgg 1811643



to top

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1719688 cttcagcgagcgggctttgg 1719707



to top

>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1176901 cttcagcgagcgggctttgg 1176920



to top

>emb|AL352979.4|CNS05TBZ Human chromosome 14 DNA sequence BAC R-368P15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155692

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     aacattctgcaaaaagctttatga 53
              |||||||||||||| |||||||||
Sbjct: 142028 aacattctgcaaaaggctttatga 142051



to top

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 1828850 cttcagcgagcgggctttgg 1828831



to top

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     cttcagcgagcgggctttgg 349
               ||||||||||||||||||||
Sbjct: 2060415 cttcagcgagcgggctttgg 2060396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,768,437
Number of Sequences: 3902068
Number of extensions: 4768437
Number of successful extensions: 82089
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81566
Number of HSP's gapped (non-prelim): 516
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top