| Clone Name | basd12o04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 375 bits (189), Expect = e-100 Identities = 489/589 (83%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93 ||||||||||| |||| ||||| || |||||||| || || ||| |||||||||||||| Sbjct: 36914 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 36973 Query: 94 gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153 |||||||| | |||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 36974 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 37033 Query: 154 ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213 || ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 37034 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 37093 Query: 214 cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273 ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| || | Sbjct: 37094 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 37153 Query: 274 atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333 ||| | |||||| ||||| |||||||| ||||||||| ||||||| || |||||| Sbjct: 37154 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 37213 Query: 334 agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393 || |||| ||||| |||| ||| ||| || |||||||| ||||| ||||| ||||| Sbjct: 37214 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 37273 Query: 394 cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453 |||||||||| || ||| | ||||| | ||| |||||||||||||| |||||||||||| Sbjct: 37274 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcccttctgg 37333 Query: 454 aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513 ||||| |||||||| |||||| | | |||| || ||| ||| |||||||| || Sbjct: 37334 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 37393 Query: 514 ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573 || ||||| ||||| ||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 37394 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 37453 Query: 574 gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622 |||||||| | ||||| |||||| ||||||||||||||||||| |||| Sbjct: 37454 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 37502
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 375 bits (189), Expect = e-100 Identities = 489/589 (83%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93 ||||||||||| |||| ||||| || |||||||| || || ||| |||||||||||||| Sbjct: 21917700 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 21917759 Query: 94 gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153 |||||||| | |||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 21917760 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 21917819 Query: 154 ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213 || ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 21917820 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 21917879 Query: 214 cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273 ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| || | Sbjct: 21917880 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 21917939 Query: 274 atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333 ||| | |||||| ||||| |||||||| ||||||||| ||||||| || |||||| Sbjct: 21917940 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 21917999 Query: 334 agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393 || |||| ||||| |||| ||| ||| || |||||||| ||||| ||||| ||||| Sbjct: 21918000 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 21918059 Query: 394 cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453 |||||||||| || ||| | ||||| | ||| |||||||||||||| |||||||||||| Sbjct: 21918060 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcccttctgg 21918119 Query: 454 aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513 ||||| |||||||| |||||| | | |||| || ||| ||| |||||||| || Sbjct: 21918120 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 21918179 Query: 514 ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573 || ||||| ||||| ||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 21918180 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 21918239 Query: 574 gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622 |||||||| | ||||| |||||| ||||||||||||||||||| |||| Sbjct: 21918240 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 21918288
>dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F05, full insert sequence Length = 2305 Score = 367 bits (185), Expect = 3e-98 Identities = 488/589 (82%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93 ||||||||||| |||| ||||| || |||||||| || || ||| |||||||||||||| Sbjct: 1430 ttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaagagaggataaca 1489 Query: 94 gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153 |||||||| | |||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 1490 gatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacgaaacttcggagg 1549 Query: 154 ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213 || ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 1550 tttgctctatacttgagaccagggggactttcagatacaggccttggctatattggacag 1609 Query: 214 cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273 ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||| || | Sbjct: 1610 tacagtggaattatccaatacatgcttctgggtaatgttggggaaacagatgatggtctg 1669 Query: 274 atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333 ||| | |||||| ||||| |||||||| ||||||||| ||||||| || |||||| Sbjct: 1670 atccggtttgcattggggtgtgagaacctgcggaagcttgagctaaggagttgttgcttc 1729 Query: 334 agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393 || |||| ||||| |||| ||| ||| || |||||||| ||||| ||||| ||||| Sbjct: 1730 agtgagcaagctttagcccgcgctatacggagtatgccttccctgagatacgtgtgggta 1789 Query: 394 cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453 |||||||||| || ||| | ||||| | ||| |||||||||||||| |||| ||||||| Sbjct: 1790 cagggctacaaggcttctaagactggtcacgatctcatgctcatggccaggcgcttctgg 1849 Query: 454 aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513 ||||| |||||||| |||||| | | |||| || ||| ||| |||||||| || Sbjct: 1850 aacatagagtttacacctcccagttctgagaatgcaaatcgaatgagagaagatggtgaa 1909 Query: 514 ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573 || ||||| ||||| ||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1910 ccttgtgtagatagtcaagctcagatacttgcatactactcccttgccgggaagaggtcg 1969 Query: 574 gactgcccgcagtctgttgttcctctgtatcctgcgtgactgtacatac 622 |||||||| | ||||| |||||| ||||||||||||||||||| |||| Sbjct: 1970 gactgcccacgatctgtggttcctttgtatcctgcgtgactgtaaatac 2018
>gb|AY109490.1| Zea mays CL920_1 mRNA sequence Length = 2298 Score = 339 bits (171), Expect = 7e-90 Identities = 501/613 (81%) Strand = Plus / Plus Query: 20 aatctatcggaacattctgcaaaaagctttatgactttcgccttgtcctgcttgacagac 79 |||||||||| ||||||||| || || ||||| || ||||| || ||||| ||| Sbjct: 1412 aatctatcgggacattctgcnnnnnnctatacgacttccggcttgttctacttgatagag 1471 Query: 80 aagagaggataacagatttgccactggacaatggtgcccgtgcgctgctgaggggctgca 139 |||||||||||||||| ||||||||||||||||||| ||| || || |||||||||||| Sbjct: 1472 aagagaggataacagacttgccactggacaatggtgtccgagctttgttgaggggctgca 1531 Query: 140 ctaaacttcggaggttcgctctatacctgagaccagggggcctttcagatgtgggcctta 199 | || ||||||||||| ||||| ||| |||||||||| || || ||||||| || || Sbjct: 1532 ccaagcttcggaggtttgctctgtacttgagaccaggagggctctcagatgcaggtctcg 1591 Query: 200 actatattggacagcacagtggaactatccactacatgcttctgggtaacgttgggcaaa 259 ||| ||||||||| ||| |||| ||||| ||||||||||| ||||| |||||| ||| Sbjct: 1592 gctacattggacagtgcagcggaaacatccagtacatgcttctcggtaatgttggggaaa 1651 Query: 260 cggatgacggattaatcagttttgcagctgggtgccggaacctgctgaagcttgaattaa 319 | ||||| ||||| ||||| || ||| || ||| ||||||| ||||||||| | | Sbjct: 1652 ctgatgatggattgatcagcttcgcattgggttgcgtaaacctgcgaaagcttgaactca 1711 Query: 320 ggagctgctgcttcagcgagcgggctttggccctcgccgtactgaaaatgccttctctga 379 |||| ||||||||||||||||| || ||||||| || |||| | |||||||| |||| Sbjct: 1712 ggagttgctgcttcagcgagcgagcactggcccttgcaatactacatatgccttccctga 1771 Query: 380 ggtacgtatgggtgcagggctacagagcctctcaaactggccgcgacctcatgctcatgg 439 ||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||||||||| Sbjct: 1772 ggtacgtatgggttcagggctacaaagcgtctcaaaccggccgagacctcatgctcatgg 1831 Query: 440 caaggcccttctggaacattgagtttacgcctcccggcacggagagcgcgggtcggctga 499 ||||||||||||||||||| |||||||| |||||| | ||| || ||| |||||| Sbjct: 1832 caaggcccttctggaacatagagtttacacctcccaatcctaagaacggaggttggctga 1891 Query: 500 tggaagatggggagccctgtgttgataggcaagctcaggtacttgcatactactccctta 559 |||||||||||||||| ||||| ||||| || |||||| ||||||||||| ||||||| Sbjct: 1892 tggaagatggggagccttgtgtagatagtcacgctcagatacttgcataccactccctcg 1951 Query: 560 gtgggaggaggtcggactgcccgcagtctgttgttcctctgtatcctgcgtgactgtaca 619 || | |||| ||||||||| || || || |||||| |||||||||||||| |||| | Sbjct: 1952 ccggtaagaggctggactgcccacaatccgtggttcctttgtatcctgcgtgagtgtaaa 2011 Query: 620 tacacaaagctgg 632 || || ||||||| Sbjct: 2012 tagactaagctgg 2024
>ref|NM_190647.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1893 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 1315 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1373 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 1374 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1433 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 1434 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1493 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 1494 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1553 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 1554 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1613 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 1614 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1673 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 1674 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1733 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 1734 gaacatcgagtttacacctcc 1754
>gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA, complete cds Length = 2088 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 1275 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1333 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 1334 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1393 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 1394 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1453 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 1454 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1513 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 1514 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1573 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 1574 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1633 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 1634 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1693 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 1694 gaacatcgagtttacacctcc 1714
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 36743312 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 36743370 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 36743371 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 36743430 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 36743431 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 36743490 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 36743491 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 36743550 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 36743551 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 36743610 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 36743611 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 36743670 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 36743671 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 36743730 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 36743731 gaacatcgagtttacacctcc 36743751
>gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine-insensitive 1 mRNA, complete cds Length = 1893 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 1315 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1373 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 1374 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1433 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 1434 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1493 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 1494 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1553 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 1554 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1613 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 1614 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1673 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 1674 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1733 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 1734 gaacatcgagtttacacctcc 1754
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 69627 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 69685 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 69686 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 69745 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 69746 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 69805 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 69806 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 69865 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 69866 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 69925 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 69926 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 69985 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 69986 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 70045 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 70046 gaacatcgagtttacacctcc 70066
>dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A10, full insert sequence Length = 2163 Score = 232 bits (117), Expect = 1e-57 Identities = 362/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaa-gagaggataac 92 ||||||||||| || || |||||||| ||||| || ||||||||| || || ||| |||| Sbjct: 1291 ttctgcaaaaatctatacgactttcggcttgtgctacttgacagagaaagacagg-taac 1349 Query: 93 agatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggag 152 |||| ||||||| |||||||||| | |||| ||| | || ||||| || |||||||| Sbjct: 1350 agatctgccacttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggag 1409 Query: 153 gttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggaca 212 ||| ||||| ||||| |||||||| || |||||||||| ||||||| ||| || ||||| Sbjct: 1410 gtttgctctctaccttagaccaggagggctttcagatgatggccttagctacatcggaca 1469 Query: 213 gcacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatt 272 | ||||||||| |||||| |||||||| ||||| || ||||| || | || | ||||| Sbjct: 1470 gtacagtggaaatatccaatacatgctactgggcaatgttggtgaatctgaccatggatt 1529 Query: 273 aatcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgctt 332 ||| |||| |||| || ||| ||||| | |||||||||||| || ||||||||||| Sbjct: 1530 gatccgtttcgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgctt 1589 Query: 333 cagcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggt 392 ||||||||| |||||| ||||||| |||||| | ||||| || ||||| ||| ||||||| Sbjct: 1590 cagcgagcgagctttgtccctcgctgtactgcagatgccctccctgagatacatatgggt 1649 Query: 393 gcagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctg 452 ||| || |||||||| |||||||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 1650 gcaaggatacagagcatctcaaacaggccttgacctcctgctcatggccaggcctttctg 1709 Query: 453 gaacattgagtttacgcctcc 473 |||||| |||||||| ||||| Sbjct: 1710 gaacatcgagtttacacctcc 1730
>gb|AY109565.1| Zea mays CL896_1 mRNA sequence Length = 2190 Score = 145 bits (73), Expect = 2e-31 Identities = 433/553 (78%) Strand = Plus / Plus Query: 34 ttctgcaaaaagctttatgactttcgccttgtcctgcttgacagacaagagaggataaca 93 |||||||| || || ||||| || || ||||| || ||||||| ||| ||| ||||||| Sbjct: 1382 ttctgcaagaatctatatgatttccggcttgttctacttgacaaacagaagaagataaca 1441 Query: 94 gatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaacttcggagg 153 || ||||||| ||||| || | |||||| || |||||| |||| |||||||||||| Sbjct: 1442 gacctgccacttgacaacggcgtccgtgccctactgaggaactgcgtcaaacttcggagg 1501 Query: 154 ttcgctctatacctgagaccagggggcctttcagatgtgggccttaactatattggacag 213 || || | ||||||||||| || || |||||||| || ||||| || ||||||| Sbjct: 1502 tttgccttctacctgagaccgggagggctttcagacgtaggcctcggttacattggacta 1561 Query: 214 cacagtggaactatccactacatgcttctgggtaacgttgggcaaacggatgacggatta 273 ||||||| | ||||| |||||||| || || |||||||| || | || ||||||| Sbjct: 1562 tacagtgggaacatccaatacatgctgctcggcaacgttggtgaatctgacaacggattg 1621 Query: 274 atcagttttgcagctgggtgccggaacctgctgaagcttgaattaaggagctgctgcttc 333 ||| |||||| | || ||| ||||||| |||||| || | ||| ||||||||||| Sbjct: 1622 atccagtttgcaacgggatgcaccaacctgcggaagctcgagctgaggggctgctgcttc 1681 Query: 334 agcgagcgggctttggccctcgccgtactgaaaatgccttctctgaggtacgtatgggtg 393 |||||||| ||| |||| | ||||| || | ||||| || ||||||||| |||||||| Sbjct: 1682 agcgagcgagctctggcagtggccgtgctccagatgccctcgctgaggtacatatgggtg 1741 Query: 394 cagggctacagagcctctcaaactggccgcgacctcatgctcatggcaaggcccttctgg 453 ||||| ||||||||||||| ||| |||| ||||||||||||||||| ||||| | |||| Sbjct: 1742 caggggtacagagcctctcgaacgggccaggacctcatgctcatggccaggccgtactgg 1801 Query: 454 aacattgagtttacgcctcccggcacggagagcgcgggtcggctgatggaagatggggag 513 |||||||| || |||||||| | |||||||| |||| |||||| |||||| || Sbjct: 1802 aacattgaattcgcgcctcccattcccgagagcgcttatcgggtgatggcagatggacag 1861 Query: 514 ccctgtgttgataggcaagctcaggtacttgcatactactcccttagtgggaggaggtcg 573 || |||||||| | || || ||||| ||||| || ||||||||| ||| |||||| || Sbjct: 1862 ccttgtgttgacacccatgcccaggtccttgcgtattactcccttgctggaaggaggccg 1921 Query: 574 gactgcccgcagt 586 |||||||| |||| Sbjct: 1922 gactgccctcagt 1934
>gb|AY111944.1| Zea mays CL896_2 mRNA sequence Length = 579 Score = 137 bits (69), Expect = 5e-29 Identities = 261/325 (80%) Strand = Plus / Plus Query: 298 aacctgctgaagcttgaattaaggagctgctgcttcagcgagcgggctttggccctcgcc 357 ||||||| |||||| || | ||| |||||||||||||||||||||| |||| | ||| Sbjct: 43 aacctgcggaagctggagctgaggggctgctgcttcagcgagcgggccctggcggtggcc 102 Query: 358 gtactgaaaatgccttctctgaggtacgtatgggtgcagggctacagagcctctcaaact 417 || || | ||||| || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 103 gtgctccagatgccctcgctgaggtacgtatgggtgcaggggtacagggcctctcagacg 162 Query: 418 ggccgcgacctcatgctcatggcaaggcccttctggaacattgagtttacgcctcccggc 477 ||||| ||||||||||||||||| ||||| | ||||||||| ||||| ||||||| | Sbjct: 163 ggccgggacctcatgctcatggccaggccgtactggaacatcgagttcgtgcctccccgt 222 Query: 478 acggagagcgcgggtcggctgatggaagatggggagccctgtgttgataggcaagctcag 537 | ||||||||| ||||| |||||| ||||| |||| ||||| || | || |||||| Sbjct: 223 cccgagagcgcgtgtcgggtgatggcggatggacagccttgtgtcgacacccatgctcag 282 Query: 538 gtacttgcatactactcccttagtgggaggaggtcggactgcccgcagtctgttgttcct 597 || || || ||||| ||||| ||| |||||| ||||||| |||| || | ||| || Sbjct: 283 gttctcgcgtactattccctcgctggaaggaggccggactgtccgcggtggctcgttact 342 Query: 598 ctgtatcctgcgtgactgtacatac 622 || |||||||||||||||| |||| Sbjct: 343 ttgcatcctgcgtgactgtagatac 367
>gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence Length = 1411 Score = 131 bits (66), Expect = 3e-27 Identities = 231/286 (80%) Strand = Plus / Plus Query: 298 aacctgctgaagcttgaattaaggagctgctgcttcagcgagcgggctttggccctcgcc 357 ||||||| |||||| || | ||| |||||||||||||||||||||| |||| | ||| Sbjct: 774 aacctgcggaagctggagctgaggggctgctgcttcagcgagcgggccctggcggtggcc 833 Query: 358 gtactgaaaatgccttctctgaggtacgtatgggtgcagggctacagagcctctcaaact 417 || || | ||||| || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 834 gtgctccagatgccctcgctgaggtacgtatgggtgcaggggtacagggcctctcagacg 893 Query: 418 ggccgcgacctcatgctcatggcaaggcccttctggaacattgagtttacgcctcccggc 477 ||||| ||||||||||||||||| ||||| | ||||||||| ||||| ||||||| | Sbjct: 894 ggccgggacctcatgctcatggccaggccgtactggaacatcgagttcgtgcctccccgt 953 Query: 478 acggagagcgcgggtcggctgatggaagatggggagccctgtgttgataggcaagctcag 537 | ||||||||| ||||| |||||| ||||| |||| ||||| || | || |||||| Sbjct: 954 cccgagagcgcgtgtcgggtgatggcggatggacagccttgtgtcgacacccatgctcag 1013 Query: 538 gtacttgcatactactcccttagtgggaggaggtcggactgcccgc 583 || || || ||||| ||||| ||| |||||| ||||||| |||| Sbjct: 1014 gttctcgcgtactattccctcgctggaaggaggccggactgtccgc 1059 Score = 44.1 bits (22), Expect = 0.58 Identities = 70/86 (81%) Strand = Plus / Plus Query: 88 ataacagatttgccactggacaatggtgcccgtgcgctgctgaggggctgcactaaactt 147 ||||| ||| |||| |||||||| |||| ||| || || |||||| |||| || || ||| Sbjct: 564 ataacggatctgccgctggacaacggtgtccgagctctactgaggagctgtaccaagctt 623 Query: 148 cggaggttcgctctatacctgagacc 173 ||| ||||||| | ||||||||||| Sbjct: 624 cggcggttcgccttgtacctgagacc 649
>gb|AY423550.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) mRNA, complete cds Length = 2030 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Plus Query: 68 tgcttgacagacaagagaggataacagatttgccactggacaatggtg 115 ||||||||||| |||| || ||||||||| ||||||| || ||||||| Sbjct: 1388 tgcttgacagagaagaaagaataacagatctgccacttgataatggtg 1435
>gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) gene, complete cds Length = 9377 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Plus Query: 68 tgcttgacagacaagagaggataacagatttgccactggacaatggtg 115 ||||||||||| |||| || ||||||||| ||||||| || ||||||| Sbjct: 5249 tgcttgacagagaagaaagaataacagatctgccacttgataatggtg 5296
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 acaagagaggataacagatttgccactggac 108 ||||| || |||||||||||||||||||||| Sbjct: 26915670 acaagtgatgataacagatttgccactggac 26915700
>gb|AF536527.1| Glycine max putative coronatine-insensitive 1 (COI1) gene, partial cds Length = 711 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 55 tttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaatgg 113 ||||||||||| |||||||| |||||| |||||| ||||||||||| |||||||| Sbjct: 145 tttcgccttgtgttgcttgaccatgaagagaagataactgatttgccacttgacaatgg 203
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 acaagagaggataacagatttgccactggac 108 ||||| || |||||||||||||||||||||| Sbjct: 94670 acaagtgatgataacagatttgccactggac 94700
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 acaagagaggataacagatttgccactggac 108 ||||| || |||||||||||||||||||||| Sbjct: 27006993 acaagtgatgataacagatttgccactggac 27007023
>gb|BT009618.1| Triticum aestivum clone wre1n.pk0122.d3:fis, full insert mRNA sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 445 cccttctggaacattgagttta 466 |||||||||||||||||||||| Sbjct: 518 cccttctggaacattgagttta 539
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence Length = 313573 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ctatcggaacattctgcaaaaa 44 |||||||||||||||||||||| Sbjct: 169061 ctatcggaacattctgcaaaaa 169082
>gb|AY109486.1| Zea mays CL529_1 mRNA sequence Length = 1683 Score = 44.1 bits (22), Expect = 0.58 Identities = 85/106 (80%) Strand = Plus / Plus Query: 50 atgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggaca 109 ||||||| ||||||||||| ||||| ||| ||| ||||| || ||||||||||||| Sbjct: 754 atgacttccgccttgtcctccttgatagagaagcacatataaccgaattgccactggaca 813 Query: 110 atggtgcccgtgcgctgctgaggggctgcactaaacttcggaggtt 155 |||| | ||||| |||| || || ||||| ||||| |||||||| Sbjct: 814 atggggttcgtgctttgcttagaggttgcaccaaactacggaggtt 859
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttggc 350 ||||||||||||||||||||| Sbjct: 1513142 cttcagcgagcgggctttggc 1513162
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttggc 350 ||||||||||||||||||||| Sbjct: 1348590 cttcagcgagcgggctttggc 1348610
>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198476 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 atggaagatggggagccctgt 519 ||||||||||||||||||||| Sbjct: 96453 atggaagatggggagccctgt 96433
>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence Length = 230020 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 atggaagatggggagccctgt 519 ||||||||||||||||||||| Sbjct: 18219 atggaagatggggagccctgt 18199
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1270154 cttcagcgagcgggctttgg 1270173
>ref|NM_129552.2| Arabidopsis thaliana COI1 (CORONATINE INSENSITIVE 1); ubiquitin-protein ligase AT2G39940 (COI1) mRNA, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 9.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 51 tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110 |||||| ||||||||| | || ||| | |||| ||||| |||||| ||||||||||||| Sbjct: 1480 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1539
>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes, complete cds; and S171 gene, partial cds Length = 216387 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cagggggcctttcagatgtg 192 |||||||||||||||||||| Sbjct: 168931 cagggggcctttcagatgtg 168912
>gb|AC126023.3| Mus musculus BAC clone RP24-422I18 from chromosome 16, complete sequence Length = 198296 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 atattggacagcacagtgga 222 |||||||||||||||||||| Sbjct: 37653 atattggacagcacagtgga 37672
>gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q24.13, complete sequence Length = 198700 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aggcccttctggaacattga 461 |||||||||||||||||||| Sbjct: 21771 aggcccttctggaacattga 21790
>gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, complete sequence Length = 173236 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 caagagaggataacagatttgcca 102 |||||||||| ||||||||||||| Sbjct: 46376 caagagaggagaacagatttgcca 46399
>emb|CR396586.7| Zebrafish DNA sequence from clone DKEY-184A18 in linkage group 10, complete sequence Length = 225059 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| ||||||||||||| ||||||| Sbjct: 211517 tgccacaggacaatggtgccagtgcgct 211490
>gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosome 14, complete sequence Length = 178534 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catgcttctgggtaacgttg 253 |||||||||||||||||||| Sbjct: 98767 catgcttctgggtaacgttg 98786
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1273565 cttcagcgagcgggctttgg 1273584
>emb|BX324006.19| Zebrafish DNA sequence from clone DKEY-46M10 in linkage group 16, complete sequence Length = 135340 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| ||||||||||||| ||||||| Sbjct: 6196 tgccacaggacaatggtgccagtgcgct 6169
>emb|CR388122.9| Zebrafish DNA sequence from clone CH211-261F7 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative function) (ENPP5), a novel gene, the 3' end of the ccm2 gene for cerebral cavernous malformation 2 and a CpG island, complete sequence Length = 55981 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| ||||||||||||| ||||||| Sbjct: 35539 tgccacaggacaatggtgccagtgcgct 35566
>gb|AY133556.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 9.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 51 tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110 |||||| ||||||||| | || ||| | |||| ||||| |||||| ||||||||||||| Sbjct: 1218 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1277
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1275919 cttcagcgagcgggctttgg 1275938
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 40.1 bits (20), Expect = 9.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 51 tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110 |||||| ||||||||| | || ||| | |||| ||||| |||||| ||||||||||||| Sbjct: 42070 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 42011
>gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, complete sequence Length = 158330 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 actgaaaatgccttctctga 379 |||||||||||||||||||| Sbjct: 89875 actgaaaatgccttctctga 89894
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggctgcactaaacttcggag 152 |||||||||||||||||||| Sbjct: 4658544 ggctgcactaaacttcggag 4658563
>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence Length = 194368 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 caagagaggataacagatttgcca 102 |||||||||| ||||||||||||| Sbjct: 14356 caagagaggagaacagatttgcca 14333
>gb|AY045625.1| Arabidopsis thaliana At2g39940/T28M21.10 mRNA, complete cds Length = 2335 Score = 40.1 bits (20), Expect = 9.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 51 tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110 |||||| ||||||||| | || ||| | |||| ||||| |||||| ||||||||||||| Sbjct: 1418 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1477
>emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 in linkage group 3, complete sequence Length = 183783 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| ||||||||||||| ||||||| Sbjct: 61346 tgccacaggacaatggtgccagtgcgct 61373
>gb|AC016724.11| Homo sapiens BAC clone RP11-339F22 from 2, complete sequence Length = 197308 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catgctcatggcaaggccct 448 |||||||||||||||||||| Sbjct: 57492 catgctcatggcaaggccct 57473
>gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14q24.3, complete sequence Length = 154616 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cagggggcctttcagatgtg 192 |||||||||||||||||||| Sbjct: 105773 cagggggcctttcagatgtg 105792
>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence Length = 120429 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aactatattggacagcacag 218 |||||||||||||||||||| Sbjct: 67934 aactatattggacagcacag 67953
>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence Length = 182644 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aactatattggacagcacag 218 |||||||||||||||||||| Sbjct: 87748 aactatattggacagcacag 87767
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1269869 cttcagcgagcgggctttgg 1269888
>gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, complete sequence Length = 198899 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aggcccttctggaacattga 461 |||||||||||||||||||| Sbjct: 21772 aggcccttctggaacattga 21791
>gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome 14, complete sequence Length = 192706 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 catgcttctgggtaacgttg 253 |||||||||||||||||||| Sbjct: 158849 catgcttctgggtaacgttg 158830
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 589 gttgttcctctgtatcctgcgtgactgt 616 ||||||| |||| ||||||||||||||| Sbjct: 2435543 gttgttcttctgcatcctgcgtgactgt 2435516
>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7, complete sequence Length = 199752 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccactggacaatggtgcccgtgc 122 ||||| |||||||||||||||||| Sbjct: 63598 gccacaggacaatggtgcccgtgc 63621
>emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in linkage group 17, complete sequence Length = 133128 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| |||||| |||||||||||||| Sbjct: 46744 tgccacaggacaacggtgcccgtgcgct 46717
>gb|AY944686.1| Homo sapiens interleukin 1 family, member 6 (epsilon) (IL1F6) gene, complete cds Length = 19140 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catgctcatggcaaggccct 448 |||||||||||||||||||| Sbjct: 12395 catgctcatggcaaggccct 12376
>tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10 Length = 495475 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catgctcatggcaaggccct 448 |||||||||||||||||||| Sbjct: 299946 catgctcatggcaaggccct 299927
>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190648 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aacattctgcaaaaagctttatga 53 |||||||||||||| ||||||||| Sbjct: 188348 aacattctgcaaaaggctttatga 188325
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ggattaatcagttttgcagc 287 |||||||||||||||||||| Sbjct: 349791 ggattaatcagttttgcagc 349810
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 589 gttgttcctctgtatcctgcgtgactgt 616 ||||||| |||| ||||||||||||||| Sbjct: 482000 gttgttcttctgcatcctgcgtgactgt 482027
>emb|BX248384.10| Zebrafish DNA sequence from clone CH211-233C3 in linkage group 8, complete sequence Length = 155293 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 tgccactggacaatggtgcccgtgcgct 125 |||||| ||||||||||||| ||||||| Sbjct: 80594 tgccacaggacaatggtgccagtgcgct 80621
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 ccggcacggagagcgcgggtcggc 496 ||||||||| |||||||||||||| Sbjct: 444165 ccggcacggtgagcgcgggtcggc 444188
>gb|AF036340.1|AF036340 Arabidopsis thaliana LRR-containing F-box protein (COI1) mRNA, complete cds Length = 2291 Score = 40.1 bits (20), Expect = 9.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 51 tgactttcgccttgtcctgcttgacagacaagagaggataacagatttgccactggacaa 110 |||||| ||||||||| | || ||| | |||| ||||| |||||| ||||||||||||| Sbjct: 1480 tgacttccgccttgtcttactcgaccgggaagaaaggattacagatctgccactggacaa 1539
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1811624 cttcagcgagcgggctttgg 1811643
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1719688 cttcagcgagcgggctttgg 1719707
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1176901 cttcagcgagcgggctttgg 1176920
>emb|AL352979.4|CNS05TBZ Human chromosome 14 DNA sequence BAC R-368P15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155692 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aacattctgcaaaaagctttatga 53 |||||||||||||| ||||||||| Sbjct: 142028 aacattctgcaaaaggctttatga 142051
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 1828850 cttcagcgagcgggctttgg 1828831
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cttcagcgagcgggctttgg 349 |||||||||||||||||||| Sbjct: 2060415 cttcagcgagcgggctttgg 2060396 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,768,437 Number of Sequences: 3902068 Number of extensions: 4768437 Number of successful extensions: 82089 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81566 Number of HSP's gapped (non-prelim): 516 length of query: 666 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 643 effective length of database: 17,143,297,704 effective search space: 11023140423672 effective search space used: 11023140423672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)