>NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71|
          Length = 579

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 311 CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRK--RGSTKRKRE 439
           C  D  G   CRSC  +KCI  G  ++   QPR+   GS K +R+
Sbjct: 53  CLIDPDGRCACRSCRFTKCIEAG-MKIGAVQPRRDPTGSQKERRK 96

>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = -1

Query: 401 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLGKPPGCLCTPTS 222
           ASL  G L Y+ +L SHS     +   L  +      YY LF  + L G     L    S
Sbjct: 236 ASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNS 295

Query: 221 FI 216
            I
Sbjct: 296 SI 297

>MEDEA_ARATH (O65312) Polycomb group protein MEDEA (Maternal embryogenesis|
           control protein) (Protein FERTILIZATION-INDEPENDENT
           SEED1) (Protein SET DOMAIN GROUP 5)
          Length = 689

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 392 RGKQPRKRGSTKRKRECRP 448
           RG++PRK G++KR +E RP
Sbjct: 669 RGREPRKTGASKRSKEARP 687

>ZN580_MOUSE (Q9DB38) Zinc finger protein 580|
          Length = 172

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 473 IQCPENPRFPPQGSSTEGESGPK 541
           +Q  E PR PPQ  +T GE GP+
Sbjct: 67  VQLEEEPRGPPQREATPGEPGPR 89

>CN12L_DROME (Q9VTL1) CSN12-like protein|
          Length = 395

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = -2

Query: 97  LVFRVCLDLVPLAQPAPKQC--FTP 29
           L++RVCLDL  LAQ   K C  FTP
Sbjct: 108 LMYRVCLDLRYLAQACEKHCQGFTP 132

>TIM44_YEAST (Q01852) Import inner membrane translocase subunit TIM44,|
           mitochondrial precursor (Mitochondrial protein import
           protein 1) (Inner membrane import site protein 45)
           (ISP45) (Membrane import machinery protein MIM44)
          Length = 431

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 63  SGTKSRQTLNTRYDPKITGVKVGQXXXXXXASSSRGKQPGSP 188
           SGT SR TL  RY  + TG+ V +       + ++G  P SP
Sbjct: 10  SGTSSR-TLTARYRSQYTGLLVARVLFSTSTTRAQGGNPRSP 50

>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 458 SLLKADILASASSTPAFAVASL*GGTLPYRC 366
           S+++   L  A++T  FAVAS+ G T  YRC
Sbjct: 99  SIMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 458 SLLKADILASASSTPAFAVASL*GGTLPYRC 366
           S+++   L  A++T  FAVAS+ G T  YRC
Sbjct: 99  SIMQGVFLLPANTTHQFAVASVQGKTFQYRC 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,135,888
Number of Sequences: 219361
Number of extensions: 2027742
Number of successful extensions: 5420
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5419
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)