ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12n19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197804.1| Oryza sativa (japonica cultivar-group) putative chlorophyll synthase (OSJNBa0057L21.2), mRNA Length = 2207 Score = 652 bits (329), Expect = 0.0 Identities = 563/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 710 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 769 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 770 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 829 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 830 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 889 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 890 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 949 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 950 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 1009 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 1010 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 1069 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 1070 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctattagat 1129 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1130 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 1189 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 1190 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 1249 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1250 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 1309 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 1310 aaactagaggggaagagcaccaagcaatgttcgacgcatct 1350
>gb|AF284781.1|AF284781 Oryza sativa LLS1 protein (Lls1) mRNA, complete cds Length = 2138 Score = 652 bits (329), Expect = 0.0 Identities = 563/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 769 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 828 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 829 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 888 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 889 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 948 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 949 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 1008 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 1009 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 1068 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 1069 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 1128 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 1129 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctattagat 1188 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1189 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 1248 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 1249 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 1308 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1309 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 1368 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 1369 aaactagaggggaagagcaccaagcaatgttcgacgcatct 1409
>dbj|AK065124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P04, full insert sequence Length = 2090 Score = 652 bits (329), Expect = 0.0 Identities = 563/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 731 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 790 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 791 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 850 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 851 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 910 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 911 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 970 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 971 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 1030 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 1031 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 1090 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 1091 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctattagat 1150 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1151 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 1210 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 1211 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 1270 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1271 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 1330 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 1331 aaactagaggggaagagcaccaagcaatgttcgacgcatct 1371
>dbj|AB021310.1| Oryza sativa CAO mRNA for chlorophyll b synthase, partial cds Length = 1472 Score = 652 bits (329), Expect = 0.0 Identities = 563/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 116 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 175 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 176 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 235 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 236 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 295 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 296 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 355 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 356 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 415 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 416 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 475 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 476 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctattagat 535 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 536 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 595 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 596 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 655 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 656 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 715 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 716 aaactagaggggaagagcaccaagcaatgttcgacgcatct 756
>dbj|AK067730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116K15, full insert sequence Length = 2540 Score = 644 bits (325), Expect = 0.0 Identities = 562/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 1133 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 1192 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 1193 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 1252 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 1253 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 1312 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 1313 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 1372 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 1373 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 1432 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 1433 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 1492 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 1493 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctattagat 1552 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1553 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 1612 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 1613 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 1672 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 | ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1673 ggcatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 1732 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 1733 aaactagaggggaagagcaccaagcaatgttcgacgcatct 1773
>dbj|AK062219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B05, full insert sequence Length = 1415 Score = 644 bits (325), Expect = 0.0 Identities = 562/641 (87%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct: 36 gctttctccagtgacctaaaagacgatacaatggtgccaatagattgttttgaggagcag 95 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 96 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 155 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 156 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 215 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 216 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 275 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 276 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 335 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 336 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 395 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 396 gcagagatagtgatggagctaccagtggagcatggacttcttctggacaatctatcagat 455 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 456 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 515 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 516 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 575 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 576 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 635 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 636 aaactagaggggaagagcaccaagcaatgttcgacgcatct 676
>dbj|AK071899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059G06, full insert sequence Length = 2088 Score = 628 bits (317), Expect = e-177 Identities = 561/641 (87%), Gaps = 1/641 (0%) Strand = Plus / Plus Query: 15 gctttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacag 74 ||||||||| ||||||| || || || ||| |||| || ||||||||||| ||||| ||| Sbjct: 731 gctttctccagtgacctaaaagacgataca-tggtgccaatagattgttttgaggagcag 789 Query: 75 tgggtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcac 134 |||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||||| Sbjct: 790 tgggtaattttccgaggaaaggatgggagacctggatgtgttatgaacacatgtgctcac 849 Query: 135 agagcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccat 194 ||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 850 agagcttgccctcttcatcttggctcagttaatgagggcagaatccaatgcccttaccat 909 Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 || ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 910 ggttgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaac 969 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 970 gtgcgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggc 1029 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 ||||| | || | | || ||||||||||| ||||| |||||||| |||||||| || Sbjct: 1030 aatgacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcac 1089 Query: 375 gcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagac 434 |||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||| Sbjct: 1090 gcagagatagtggtggagctaccagtggagcatggacttcttctggacaatctattagat 1149 Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1150 cttgctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaagc 1209 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||||||||||||| |||||||||| ||||| ||||||||||| || || ||| Sbjct: 1210 ttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccatacccgatc 1269 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 || ||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1270 gacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaaagcctgga 1329 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || ||||| ||||||||||| |||||||| | |||||||| Sbjct: 1330 aaactagaggggaagagcaccaagcaatgttcgacgcatct 1370
>ref|NM_197802.1| Oryza sativa (japonica cultivar-group) putative chlorophyll synthase (OSJNBa0057L21.9), mRNA Length = 1560 Score = 626 bits (316), Expect = e-176 Identities = 541/616 (87%) Strand = Plus / Plus Query: 18 ttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacagtgg 77 |||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 607 ttctccggtgacctgaaagatgatacaatggtaccaatagattgttttgaggagcagtgg 666 Query: 78 gtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcacaga 137 ||||| ||||| ||||| ||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 667 gtaattttccgaggaaaggatgggagacctggatgtgttcagaacacatgtgctcacaga 726 Query: 138 gcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccatggg 197 |||||||||||| ||||||| ||||| | |||||| |||||| ||||||| ||||||| Sbjct: 727 gcctgccctcttcatcttggctcagttagtgagggtagaatccaatgccctttccatggg 786 Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaacgtg 257 ||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| ||| Sbjct: 787 tgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaatgtg 846 Query: 258 cgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggcgat 317 ||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || ||| Sbjct: 847 cgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggtgat 906 Query: 318 gacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccatgca 377 | ||| || | || ||||||||||| | |||||||||||| |||||||| |||||| Sbjct: 907 ggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcatgca 966 Query: 378 gagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagacctt 437 ||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| || Sbjct: 967 gagatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatatt 1026 Query: 438 gctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagcttt 497 |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1027 gctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaagcttg 1086 Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| Sbjct: 1087 gtgaagttcttgacacctgcatctgggctccaagggtactgggatccttaccccatcgac 1146 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 |||||||| ||||| || ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1147 atggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcctggaaaa 1206 Query: 618 ctagaagggaagagca 633 ||||| || ||||||| Sbjct: 1207 ctagagggaaagagca 1222
>dbj|AK063367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-D11, full insert sequence Length = 1949 Score = 626 bits (316), Expect = e-176 Identities = 541/616 (87%) Strand = Plus / Plus Query: 18 ttctccggtgacctcaaggatgacacaatggtacccatagattgtttcgaggaacagtgg 77 |||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 690 ttctccggtgacctgaaagatgatacaatggtaccaatagattgttttgaggagcagtgg 749 Query: 78 gtaatattccgcggaaaagataaaaggcctggatgtgtccagaatacatgtgctcacaga 137 ||||| ||||| ||||| ||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 750 gtaattttccgaggaaaggatgggagacctggatgtgttcagaacacatgtgctcacaga 809 Query: 138 gcctgccctcttgatcttggttcagtgaatgagggcagaatcacttgcccttaccatggg 197 |||||||||||| ||||||| ||||| | |||||| |||||| ||||||| ||||||| Sbjct: 810 gcctgccctcttcatcttggctcagttagtgagggtagaatccaatgccctttccatggg 869 Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaacgtg 257 ||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| ||| Sbjct: 870 tgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaatgtg 929 Query: 258 cgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggcgat 317 ||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || ||| Sbjct: 930 cgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggtgat 989 Query: 318 gacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccatgca 377 | ||| || | || ||||||||||| | |||||||||||| |||||||| |||||| Sbjct: 990 ggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcatgca 1049 Query: 378 gagatagtgatggagctaccagtggaacatggacttcttttggacaatctactagacctt 437 ||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| || Sbjct: 1050 gagatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatatt 1109 Query: 438 gctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagcttt 497 |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1110 gctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaagcttg 1169 Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| Sbjct: 1170 gtgaagttcttgacacctgcatctgggctccaagggtactgggatccttaccccatcgac 1229 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 |||||||| ||||| || ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1230 atggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcctggaaaa 1289 Query: 618 ctagaagggaagagca 633 ||||| || ||||||| Sbjct: 1290 ctagagggaaagagca 1305
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 180 bits (91), Expect = 4e-42 Identities = 109/115 (94%) Strand = Plus / Plus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 43703 agatagtgatggagctaccagtggagcatggacttcttctggacaatctattagatcttg 43762 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 43763 ctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaag 43817 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 492 agctttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcct 551 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 53392 agcttggtgaagttcttgacacctgcatctgggctccaagggtactgggatccttacccc 53451 Query: 552 atcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcct 611 ||||| |||||||| ||||| || ||||||||||||||||||| ||||||||| |||||| Sbjct: 53452 atcgacatggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcct 53511 Query: 612 ggaaagctagaagggaagagca 633 ||||| ||||| || ||||||| Sbjct: 53512 ggaaaactagagggaaagagca 53533 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 487 ttccaagctttgtgaagttcttgacacctacatctgggctccaagggtactgggatcctt 546 |||| ||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 43931 ttcccagcttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccat 43990 Query: 547 atcctatcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctcca 606 | || ||||| ||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 43991 acccgatcgacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaa 44050 Query: 607 agcctggaaagctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||||| ||||| ||||||||||| |||||||| | |||||||| Sbjct: 44051 agcctggaaaactagaggggaagagcaccaagcaatgttcgacgcatct 44099 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Plus Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaacgtg 257 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 43410 tgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaacgtg 43469 Query: 258 cgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggcgat 317 ||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| || Sbjct: 43470 cgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggcaat 43529 Query: 318 gacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccatgca 377 ||| | || | | || ||||||||||| ||||| |||||||| |||||||| || ||| Sbjct: 43530 gacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcacgca 43589 Query: 378 gag 380 ||| Sbjct: 43590 gag 43592 Score = 163 bits (82), Expect = 9e-37 Identities = 160/186 (86%) Strand = Plus / Plus Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 |||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| Sbjct: 52894 gggtgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaat 52953 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct: 52954 gtgcgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggt 53013 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 |||| ||| || | || ||||||||||| | |||||||||||| |||||||| ||| Sbjct: 53014 gatggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcat 53073 Query: 375 gcagag 380 |||||| Sbjct: 53074 gcagag 53079 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 |||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 53192 agatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatattg 53251 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 53252 ctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaag 53306 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 47 ggtacccatagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcc 106 |||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || || Sbjct: 52333 ggtaccaatagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacc 52392 Query: 107 tggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaa 166 ||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 52393 tggatgtgttcagaacacatgtgctcacagagcctgccctcttcatcttggctcagttag 52452 Query: 167 tgagggcagaatcacttgcccttaccatgg 196 |||||| |||||| ||||||| |||||| Sbjct: 52453 tgagggtagaatccaatgccctttccatgg 52482 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 54 atagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcctggatgt 113 ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || ||||||||| Sbjct: 43126 atagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacctggatgt 43185 Query: 114 gtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaatgagggc 173 || ||| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 43186 gttatgaacacatgtgctcacagagcttgccctcttcatcttggctcagttaatgagggc 43245 Query: 174 agaatcacttgcccttaccatgg 196 |||||| |||||||||||||| Sbjct: 43246 agaatccaatgcccttaccatgg 43268 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 18 ttctccggtgacctcaaggatgacacaatggta 50 |||||||||||||| || ||||| ||||||||| Sbjct: 52221 ttctccggtgacctgaaagatgatacaatggta 52253
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 180 bits (91), Expect = 4e-42 Identities = 109/115 (94%) Strand = Plus / Minus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 21964618 agatagtgatggagctaccagtggagcatggacttcttctggacaatctattagatcttg 21964559 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21964558 ctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaag 21964504 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 492 agctttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcct 551 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 21954929 agcttggtgaagttcttgacacctgcatctgggctccaagggtactgggatccttacccc 21954870 Query: 552 atcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcct 611 ||||| |||||||| ||||| || ||||||||||||||||||| ||||||||| |||||| Sbjct: 21954869 atcgacatggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcct 21954810 Query: 612 ggaaagctagaagggaagagca 633 ||||| ||||| || ||||||| Sbjct: 21954809 ggaaaactagagggaaagagca 21954788 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Minus Query: 487 ttccaagctttgtgaagttcttgacacctacatctgggctccaagggtactgggatcctt 546 |||| ||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 21964390 ttcccagcttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccat 21964331 Query: 547 atcctatcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctcca 606 | || ||||| ||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 21964330 acccgatcgacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaa 21964271 Query: 607 agcctggaaagctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||||| ||||| ||||||||||| |||||||| | |||||||| Sbjct: 21964270 agcctggaaaactagaggggaagagcaccaagcaatgttcgacgcatct 21964222 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaacgtg 257 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 21964911 tgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaacgtg 21964852 Query: 258 cgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggcgat 317 ||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| || Sbjct: 21964851 cgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggcaat 21964792 Query: 318 gacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccatgca 377 ||| | || | | || ||||||||||| ||||| |||||||| |||||||| || ||| Sbjct: 21964791 gacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcacgca 21964732 Query: 378 gag 380 ||| Sbjct: 21964731 gag 21964729 Score = 163 bits (82), Expect = 9e-37 Identities = 160/186 (86%) Strand = Plus / Minus Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 |||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| Sbjct: 21955427 gggtgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaat 21955368 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct: 21955367 gtgcgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggt 21955308 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 |||| ||| || | || ||||||||||| | |||||||||||| |||||||| ||| Sbjct: 21955307 gatggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcat 21955248 Query: 375 gcagag 380 |||||| Sbjct: 21955247 gcagag 21955242 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 |||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 21955129 agatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatattg 21955070 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 21955069 ctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaag 21955015 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Minus Query: 47 ggtacccatagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcc 106 |||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || || Sbjct: 21955988 ggtaccaatagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacc 21955929 Query: 107 tggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaa 166 ||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 21955928 tggatgtgttcagaacacatgtgctcacagagcctgccctcttcatcttggctcagttag 21955869 Query: 167 tgagggcagaatcacttgcccttaccatgg 196 |||||| |||||| ||||||| |||||| Sbjct: 21955868 tgagggtagaatccaatgccctttccatgg 21955839 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 54 atagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcctggatgt 113 ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || ||||||||| Sbjct: 21965195 atagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacctggatgt 21965136 Query: 114 gtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaatgagggc 173 || ||| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 21965135 gttatgaacacatgtgctcacagagcttgccctcttcatcttggctcagttaatgagggc 21965076 Query: 174 agaatcacttgcccttaccatgg 196 |||||| |||||||||||||| Sbjct: 21965075 agaatccaatgcccttaccatgg 21965053 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 18 ttctccggtgacctcaaggatgacacaatggta 50 |||||||||||||| || ||||| ||||||||| Sbjct: 21956100 ttctccggtgacctgaaagatgatacaatggta 21956068
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 180 bits (91), Expect = 4e-42 Identities = 109/115 (94%) Strand = Plus / Minus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 21976281 agatagtgatggagctaccagtggagcatggacttcttctggacaatctattagatcttg 21976222 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21976221 ctcatgctccttttactcatacatccacctttgccaagggttggagtgttccaag 21976167 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 492 agctttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcct 551 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 21966592 agcttggtgaagttcttgacacctgcatctgggctccaagggtactgggatccttacccc 21966533 Query: 552 atcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcct 611 ||||| |||||||| ||||| || ||||||||||||||||||| ||||||||| |||||| Sbjct: 21966532 atcgacatggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcct 21966473 Query: 612 ggaaagctagaagggaagagca 633 ||||| ||||| || ||||||| Sbjct: 21966472 ggaaaactagagggaaagagca 21966451 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Minus Query: 487 ttccaagctttgtgaagttcttgacacctacatctgggctccaagggtactgggatcctt 546 |||| ||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 21976053 ttcccagcttggtgaagttcttgacaccttcatctgggcttcaaggatactgggatccat 21975994 Query: 547 atcctatcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctcca 606 | || ||||| ||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 21975993 acccgatcgacatggaatttcgaccaccatgcatggtgttgtcaaccattggcatctcaa 21975934 Query: 607 agcctggaaagctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||||| ||||| ||||||||||| |||||||| | |||||||| Sbjct: 21975933 agcctggaaaactagaggggaagagcaccaagcaatgttcgacgcatct 21975885 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaacgtg 257 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 21976574 tgggagtattcaactgatggaaaatgtgagaaaatgccatccacaaagatgctcaacgtg 21976515 Query: 258 cgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggcgat 317 ||||||||| |||| || ||||| ||||||||||||||||| ||||| ||||| ||| || Sbjct: 21976514 cgcatccggtcattaccatgctttgagcaagaaggaatggtttggatatggcctggcaat 21976455 Query: 318 gacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccatgca 377 ||| | || | | || ||||||||||| ||||| |||||||| |||||||| || ||| Sbjct: 21976454 gacccaccgaagtcgactatcccttctctgctgcctccttcaggatttacaattcacgca 21976395 Query: 378 gag 380 ||| Sbjct: 21976394 gag 21976392 Score = 163 bits (82), Expect = 9e-37 Identities = 160/186 (86%) Strand = Plus / Minus Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 |||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| Sbjct: 21967090 gggtgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaat 21967031 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct: 21967030 gtgcgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggt 21966971 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 |||| ||| || | || ||||||||||| | |||||||||||| |||||||| ||| Sbjct: 21966970 gatggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcat 21966911 Query: 375 gcagag 380 |||||| Sbjct: 21966910 gcagag 21966905 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 |||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 21966792 agatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatattg 21966733 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 21966732 ctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaag 21966678 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Minus Query: 47 ggtacccatagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcc 106 |||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || || Sbjct: 21967651 ggtaccaatagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacc 21967592 Query: 107 tggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaa 166 ||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 21967591 tggatgtgttcagaacacatgtgctcacagagcctgccctcttcatcttggctcagttag 21967532 Query: 167 tgagggcagaatcacttgcccttaccatgg 196 |||||| |||||| ||||||| |||||| Sbjct: 21967531 tgagggtagaatccaatgccctttccatgg 21967502 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 54 atagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcctggatgt 113 ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || ||||||||| Sbjct: 21976858 atagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacctggatgt 21976799 Query: 114 gtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaatgagggc 173 || ||| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 21976798 gttatgaacacatgtgctcacagagcttgccctcttcatcttggctcagttaatgagggc 21976739 Query: 174 agaatcacttgcccttaccatgg 196 |||||| |||||||||||||| Sbjct: 21976738 agaatccaatgcccttaccatgg 21976716 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 18 ttctccggtgacctcaaggatgacacaatggta 50 |||||||||||||| || ||||| ||||||||| Sbjct: 21967763 ttctccggtgacctgaaagatgatacaatggta 21967731
>dbj|AK100517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100H07, full insert sequence Length = 2983 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 492 agctttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcct 551 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 274 agcttggtgaagttcttgacacctgcatctgggctccaagggtactgggatccttacccc 215 Query: 552 atcgatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcct 611 ||||| |||||||| ||||| || ||||||||||||||||||| ||||||||| |||||| Sbjct: 214 atcgacatggagtttcgaccgccatgcatggtcttgtcaaccactggcatctcaaagcct 155 Query: 612 ggaaagctagaagggaagagca 633 ||||| ||||| || ||||||| Sbjct: 154 ggaaaactagagggaaagagca 133 Score = 163 bits (82), Expect = 9e-37 Identities = 160/186 (86%) Strand = Plus / Minus Query: 195 gggtgggagtattcgactgatggaaaatgcgagaaaatgccatcaacgaagatgctcaac 254 |||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||| Sbjct: 772 gggtgggagtattcaactgatggaaaatgtgagaaaatgccagccacgaagttgctcaat 713 Query: 255 gtgcgcatccgggcattgccgtgcttcgagcaagaaggaatggtctggatctggcccggc 314 |||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||| || Sbjct: 712 gtgcgcatccggtcattgccatgctttgagcaagaaggcatggtttggatctggcctggt 653 Query: 315 gatgacacgcccacacccaccatcccttctcttctgcccccttcagggtttacaatccat 374 |||| ||| || | || ||||||||||| | |||||||||||| |||||||| ||| Sbjct: 652 gatggcacaccggagtcgactatcccttctctgcagcccccttcaggatttacaattcat 593 Query: 375 gcagag 380 |||||| Sbjct: 592 gcagag 587 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 379 agatagtgatggagctaccagtggaacatggacttcttttggacaatctactagaccttg 438 |||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 474 agatggtgatggagctaccggtggagcatggacttctgctggacaatctattagatattg 415 Query: 439 ctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 ||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 414 ctcatgctccttttgctcatacgtccacctttgccaagggttggagtgttccaag 360 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Minus Query: 47 ggtacccatagattgtttcgaggaacagtgggtaatattccgcggaaaagataaaaggcc 106 |||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||| || || Sbjct: 1332 ggtaccaatagattgttttgaggagcagtgggtaattttccgaggaaaggatgggagacc 1273 Query: 107 tggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaa 166 ||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 1272 tggatgtgttcagaacacatgtgctcacagagcctgccctcttcatcttggctcagttag 1213 Query: 167 tgagggcagaatcacttgcccttaccatgg 196 |||||| |||||| ||||||| |||||| Sbjct: 1212 tgagggtagaatccaatgccctttccatgg 1183 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 18 ttctccggtgacctcaaggatgacacaatggta 50 |||||||||||||| || ||||| ||||||||| Sbjct: 1444 ttctccggtgacctgaaagatgatacaatggta 1412
>ref|NM_202240.1| Arabidopsis thaliana CH1 (CHLORINA 1); chlorophyll a oxygenase AT1G44446 (CH1) transcript variant AT1G44446.2 mRNA, complete cds Length = 2049 Score = 129 bits (65), Expect = 1e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1165 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaagt 1224 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1225 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1284 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 |||||||| || |||||| || || || || || || || || || || || || || Sbjct: 1285 gatatggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccggg 1344 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1345 aaactagaaggcaaaagcacacagcagtgtgcaacacatct 1385 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 838 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 897 Query: 168 gaggg 172 ||||| Sbjct: 898 gaggg 902
>ref|NM_103548.3| Arabidopsis thaliana CH1 (CHLORINA 1); chlorophyll a oxygenase AT1G44446 (CH1) transcript variant AT1G44446.1 mRNA, complete cds Length = 1969 Score = 129 bits (65), Expect = 1e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1165 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaagt 1224 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1225 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1284 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 |||||||| || |||||| || || || || || || || || || || || || || Sbjct: 1285 gatatggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccggg 1344 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1345 aaactagaaggcaaaagcacacagcagtgtgcaacacatct 1385 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 838 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 897 Query: 168 gaggg 172 ||||| Sbjct: 898 gaggg 902
>gb|AY128357.1| Arabidopsis thaliana chlorophyll a oxygenase (At1g44446) mRNA, complete cds Length = 1966 Score = 129 bits (65), Expect = 1e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1165 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaagt 1224 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1225 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1284 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 |||||||| || |||||| || || || || || || || || || || || || || Sbjct: 1285 gatatggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccggg 1344 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1345 aaactagaaggcaaaagcacacagcagtgtgcaacacatct 1385 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 838 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 897 Query: 168 gaggg 172 ||||| Sbjct: 898 gaggg 902
>gb|BT002075.1| Arabidopsis thaliana chlorophyll a oxygenase (At1g44446) mRNA, complete cds Length = 1726 Score = 129 bits (65), Expect = 1e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1093 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaagt 1152 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1153 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1212 Query: 555 gatatggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctgga 614 |||||||| || |||||| || || || || || || || || || || || || || Sbjct: 1213 gatatggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccggg 1272 Query: 615 aagctagaagggaagagcacacagcaatgtgcaacgcatct 655 || |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1273 aaactagaaggcaaaagcacacagcagtgtgcaacacatct 1313 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 766 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 825 Query: 168 gaggg 172 ||||| Sbjct: 826 gaggg 830
>dbj|AB021316.1| Arabidopsis thaliana mRNA for chlorophyll b synthase, complete cds Length = 1928 Score = 127 bits (64), Expect = 5e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1127 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaagt 1186 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1187 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1246 Query: 555 gatatgga 562 |||||||| Sbjct: 1247 gatatgga 1254 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 800 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 859 Query: 168 gaggg 172 ||||| Sbjct: 860 gaggg 864
>gb|DQ423120.1| Capsicum annuum cultivar TA3417 chloroplast chlorophyll a oxygenase (At1g44446) gene, partial cds; nuclear gene for chloroplast product Length = 299 Score = 123 bits (62), Expect = 8e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 368 aatccatgcagagatagtgatggagctaccagtggaacatggacttcttttggacaatct 427 |||||||||||||||||||||||| || || |||||||||||||| ||||| |||||||| Sbjct: 174 aatccatgcagagatagtgatggaacttccggtggaacatggactacttttagacaatct 233 Query: 428 actagaccttgctcatgccccttttactcatacatccacctttgccaagggctggagtgt 487 | || ||||| ||||||||||| ||||||||||| |||||||| || || |||||||| Sbjct: 234 tttggatcttgcacatgcccctttcactcatacatcaacctttgctaaaggatggagtgt 293 Query: 488 tccaag 493 ||||| Sbjct: 294 cccaag 299 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatc 238 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 4 tgggaatattctactgatgggaagtgtgagaaaatgccatc 44
>emb|BX813908.1|CNS0ADTJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1835 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||||||||||| || |||||||||||||| |||| || ||||||||||| ||||| Sbjct: 1081 cttgctcatgccccattaactcatacatccacttttgaaaaaggctggagtgtcccaagt 1140 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| ||| Sbjct: 1141 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatc 1200 Query: 555 gatatgga 562 |||||||| Sbjct: 1201 gatatgga 1208 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 755 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 814 Query: 168 gaggg 172 ||||| Sbjct: 815 gaggg 819
>gb|DQ423121.1| Solanum tuberosum cultivar TA3427 chloroplast chlorophyll a oxygenase (At1g44446) gene, partial cds; nuclear gene for chloroplast product Length = 299 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 369 atccatgcagagatagtgatggagctaccagtggaacatggacttcttttggacaatcta 428 ||||||||||||||||| ||||| || || |||||||||||||| ||||| |||||||| Sbjct: 175 atccatgcagagatagtcatggaacttccggtggaacatggactacttttagacaatctt 234 Query: 429 ctagaccttgctcatgccccttttactcatacatccacctttgccaagggctggagtgtt 488 |||| ||||| ||||| ||||| ||||||||||| || ||||| || || |||||||| Sbjct: 235 ttagatcttgcacatgcacctttcactcatacatcaacttttgctaaaggatggagtgta 294 Query: 489 ccaag 493 ||||| Sbjct: 295 ccaag 299 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 198 tgggagtattcgactgatggaaaatgcgagaaaatgccatcaac 241 ||||||||||| ||||| || || || ||||||||||||||||| Sbjct: 4 tgggagtattccactgacgggaagtgtgagaaaatgccatcaac 47
>emb|BX816677.1|CNS0AD56 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1927 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaagc 494 |||||| || |||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1100 cttgctaataccccattaactcatacatccacttttgcaaaaggctggagtgtcccaagt 1159 Query: 495 tttgtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatc 554 || |||||||| || |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1160 ttggtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaata 1219 Query: 555 gatatgga 562 |||||||| Sbjct: 1220 gatatgga 1227 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 771 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 830 Query: 168 gaggg 172 ||||| Sbjct: 831 gaggg 835
>gb|DQ122810.1| Medicago sativa clone QC1 putative chlorophyll synthase mRNA, partial cds Length = 659 Score = 89.7 bits (45), Expect = 1e-14 Identities = 167/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 370 tccatgcagagatagtgatggagctaccagtggaacatggacttcttttggacaatctac 429 ||||||| ||||| || ||||| || || || ||||| ||| | ||||||||||| || Sbjct: 455 tccatgccgagattgtcatggaacttccggttgaacacggattacttttggacaaccttt 514 Query: 430 tagaccttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttc 489 | || ||||| || ||||||||||||||||| || || ||||| ||||| ||||||| || Sbjct: 515 tggatcttgcgcacgccccttttactcatacttcgacatttgctaagggatggagtggtc 574 Query: 490 caagctttgtgaagttcttgacacctacatctgggctccaaggg-tact-gggatcctta 547 | ||||||||||| || |||||||| ||||||| || |||||| || | ||||||| || Sbjct: 575 ctagctttgtgaattttttgacaccggcatctggtctgcaagggatattggggatcccta 634 Query: 548 tcctatcgatatggagttccgacca 572 ||| | ||||||||||| |||||| Sbjct: 635 tccgaatgatatggagtttcgacca 659 Score = 83.8 bits (42), Expect = 7e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 105 cctggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtg 164 ||||||||||| || ||||||||||| |||||||| || || ||| ||||||| || || Sbjct: 190 cctggatgtgttcaaaatacatgtgcacacagagcatgtccccttcatcttggctctgta 249 Query: 165 aatgagggcagaatcacttgcccttaccatgggtgggagtattcgactgatggaaaatgc 224 |||||||| | ||| | || || ||||| || ||||| ||| |||| || ||||||||| Sbjct: 250 aatgagggtcgtatcgcatgtccctaccacggctgggaatatacgacagacggaaaatgc 309 Query: 225 gagaaaatgccatc 238 |||||||||||||| Sbjct: 310 gagaaaatgccatc 323
>ref|NM_202241.1| Arabidopsis thaliana CH1 (CHLORINA 1); chlorophyll a oxygenase AT1G44446 (CH1) transcript variant AT1G44446.3 mRNA, complete cds Length = 2045 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1165 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaag 1223 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||| || |||||||| || || |||||||| ||||||||||| ||||| |||||| Sbjct: 1304 gtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatcgat 1363 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 ||||| || |||||| || || || || || || || || || || || || || || Sbjct: 1364 atggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccgggaaa 1423 Query: 618 ctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1424 ctagaaggcaaaagcacacagcagtgtgcaacacatct 1461 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 838 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 897 Query: 168 gaggg 172 ||||| Sbjct: 898 gaggg 902
>gb|AC084807.12|AC084807 Arabidopsis thaliana chromosome 1 BAC T18F15 genomic sequence, complete sequence Length = 81704 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 38252 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaag 38310 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||| || |||||||| || || |||||||| ||||||||||| ||||| |||||| Sbjct: 38391 gtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatcgat 38450 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 ||||| || |||||| || || || || || || || || || || || || || || Sbjct: 38451 atggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccgggaaa 38510 Query: 618 ctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 38511 ctagaaggcaaaagcacacagcagtgtgcaacacatct 38548 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 37762 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 37821 Query: 168 gaggg 172 ||||| Sbjct: 37822 gaggg 37826
>dbj|AB030565.1| Arabidopsis thaliana CAO gene for chlorophyll a oxygenase, complete cds Length = 2773 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1812 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaag 1870 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||| || |||||||| || || |||||||| ||||||||||| ||||| |||||| Sbjct: 1951 gtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatcgat 2010 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 ||||| || |||||| || || || || || || || || || || || || || || Sbjct: 2011 atggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccgggaaa 2070 Query: 618 ctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 2071 ctagaaggcaaaagcacacagcagtgtgcaacacatct 2108 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 1322 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 1381 Query: 168 gaggg 172 ||||| Sbjct: 1382 gaggg 1386
>gb|AF177200.1|AF177200 Arabidopsis thaliana chlorophyll a oxygenase (CAO) gene, complete cds Length = 3273 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 435 cttgctcatgccccttttactcatacatccacctttgccaagggctggagtgttccaag 493 |||||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 2313 cttgctcatgccccattcactcatacatccacttttgcaaaaggctggagtgtcccaag 2371 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 498 gtgaagttcttgacacctacatctgggctccaagggtactgggatccttatcctatcgat 557 |||||||| || |||||||| || || |||||||| ||||||||||| ||||| |||||| Sbjct: 2452 gtgaagtttttaacacctacctcgggtctccaaggatactgggatccatatccaatcgat 2511 Query: 558 atggagttccgaccaccctgcatggtcttgtcaaccattggcatctccaagcctggaaag 617 ||||| || |||||| || || || || || || || || || || || || || || Sbjct: 2512 atggaatttaaaccaccgtgtattgttttatcgacaatcgggatatcaaaacccgggaaa 2571 Query: 618 ctagaagggaagagcacacagcaatgtgcaacgcatct 655 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 2572 ctagaaggcaaaagcacacagcagtgtgcaacacatct 2609 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 108 ggatgtgtccagaatacatgtgctcacagagcctgccctcttgatcttggttcagtgaat 167 |||||||| | |||||||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 1823 ggatgtgtacggaatacatgtgcgcatagagcatgtcctcttgatcttggcacagtgaac 1882 Query: 168 gaggg 172 ||||| Sbjct: 1883 gaggg 1887
>dbj|AB021311.1| Marchantia polymorpha CAO mRNA for chlorophyll b synthase, partial cds Length = 846 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 gagcaagaaggaatggtctggatctggcccggcgatga 319 |||||||| |||||||||||||||||||| || ||||| Sbjct: 259 gagcaagacggaatggtctggatctggcctggggatga 296
>emb|AL139244.21| Human DNA sequence from clone RP5-1043G4 on chromosome 1p32.1-33 Contains the 3' end of a novel gene (FLJ46354), the TTC4 gene for tetratricopeptide repeat domain 4, a novel gene (DKFZp727A071), the 3' end of a novel gene (FLJ20619) and three CpG islands, complete sequence Length = 129156 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 606 aagcctggaaagctagaagggaaga 630 ||||||||||||||||||||||||| Sbjct: 22822 aagcctggaaagctagaagggaaga 22798
>gb|AC011736.4|AC011736 Homo sapiens BAC clone CTD-2331A14 from 1, complete sequence Length = 122146 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 606 aagcctggaaagctagaagggaaga 630 ||||||||||||||||||||||||| Sbjct: 10385 aagcctggaaagctagaagggaaga 10409
>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3' end of the Nrp2 gene for neuropilin 2, complete sequence Length = 157987 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 216 ggaaaatgcgagaaaatgccatca 239 |||||||||||||||||||||||| Sbjct: 5593 ggaaaatgcgagaaaatgccatca 5570
>gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome 8, complete sequence Length = 182564 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 330 cccaccatcccttctcttctgccc 353 |||||||||||||||||||||||| Sbjct: 121809 cccaccatcccttctcttctgccc 121786
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tgatggaaaatgcgagaaaatg 233 |||||||||||||||||||||| Sbjct: 122427 tgatggaaaatgcgagaaaatg 122448
>gb|BC075374.1| Xenopus tropicalis glutaredoxin 5, mRNA (cDNA clone MGC:89090 IMAGE:7006202), complete cds Length = 807 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 acatggacttcttttggaca 423 |||||||||||||||||||| Sbjct: 608 acatggacttcttttggaca 589
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cacagagcctgccctcttga 151 |||||||||||||||||||| Sbjct: 2099 cacagagcctgccctcttga 2080
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gaaaagataaaaggcctgga 110 |||||||||||||||||||| Sbjct: 372594 gaaaagataaaaggcctgga 372613
>gb|BC071212.1| Mus musculus RIKEN cDNA 1700037H04 gene, mRNA (cDNA clone IMAGE:4224813), complete cds Length = 1389 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 934 ctagaccttgctcatgcccc 953
>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete sequence Length = 245582 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gaatacatgtgctcacagag 138 |||||||||||||||||||| Sbjct: 63671 gaatacatgtgctcacagag 63690
>gb|AC124347.4| Mus musculus BAC clone RP24-462J14 from chromosome 19, complete sequence Length = 179915 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gaatacatgtgctcacagag 138 |||||||||||||||||||| Sbjct: 171250 gaatacatgtgctcacagag 171269
>emb|X64070.1|MMCDMPR Mus musculus gene for cation-dependent mannose-6-phosphate receptor Length = 10069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tgctcatgccccttttactc 456 |||||||||||||||||||| Sbjct: 363 tgctcatgccccttttactc 344
>gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chromosome 12, complete sequence Length = 135756 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 tgtgaagttcttgacaccta 516 |||||||||||||||||||| Sbjct: 130100 tgtgaagttcttgacaccta 130081
>emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in linkage group 23, complete sequence Length = 271754 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgacacaatggtacccata 56 |||||||||||||||||||| Sbjct: 161508 atgacacaatggtacccata 161489
>ref|NM_001004919.1| Xenopus tropicalis glutaredoxin 5 (grx5), mRNA Length = 807 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 acatggacttcttttggaca 423 |||||||||||||||||||| Sbjct: 608 acatggacttcttttggaca 589
>emb|AJ000884.1|PDJ000884 Paracoccus denitrificans, MxaA, MxaC, MxaK, MxaL, MxaD and orf's Length = 5962 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tgcgcatccgggcattgccg 275 |||||||||||||||||||| Sbjct: 2501 tgcgcatccgggcattgccg 2482
>emb|BX470099.5| Zebrafish DNA sequence from clone DKEY-14P11 in linkage group 23, complete sequence Length = 199831 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 atgacacaatggtacccata 56 |||||||||||||||||||| Sbjct: 19053 atgacacaatggtacccata 19072
>ref|NM_026091.1| Mus musculus RIKEN cDNA 1700037H04 gene (1700037H04Rik), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 819 ctagaccttgctcatgcccc 838
>gb|AY786443.1| Stenotrophomonas maltophilia strain DI-6 DdmC (ddmC) gene, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tctggatctggcccggcgat 317 |||||||||||||||||||| Sbjct: 323 tctggatctggcccggcgat 342
>dbj|AK003406.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110004B24 product:DJ1009E24.3 (A NOVEL PROTEIN) (CDNA FLJ14158 FIS, CLONE NT2RM1001112) (UNKNOWN) (PROTEIN FOR MGC:4349) homolog [Homo sapiens], full insert sequence Length = 1242 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 819 ctagaccttgctcatgcccc 838
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tgctcatgccccttttactc 456 |||||||||||||||||||| Sbjct: 95728 tgctcatgccccttttactc 95709
>dbj|AK040365.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430089D03 product:hypothetical protein, full insert sequence Length = 1648 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 1224 ctagaccttgctcatgcccc 1243
>dbj|AK048328.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049H18 product:unclassifiable, full insert sequence Length = 3462 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 300 ctagaccttgctcatgcccc 281
>gb|AC013246.13|AC013246 Homo sapiens 12 BAC RP11-997P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161822 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctacatctgggctccaagg 532 |||||||||||||||||||| Sbjct: 51216 cctacatctgggctccaagg 51197
>gb|AC019171.4| Homo sapiens BAC clone RP11-173C1 from 2, complete sequence Length = 180445 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcccttctcttctgccccct 356 |||||||||||||||||||| Sbjct: 143856 tcccttctcttctgccccct 143875
>gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190961 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 tgtgaagttcttgacaccta 516 |||||||||||||||||||| Sbjct: 46039 tgtgaagttcttgacaccta 46020
>gb|AC116736.14| Mus musculus chromosome 3, clone RP23-370O17, complete sequence Length = 180168 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cacagagcctgccctcttga 151 |||||||||||||||||||| Sbjct: 39838 cacagagcctgccctcttga 39857
>gb|BC006041.1| Mus musculus RIKEN cDNA 1700037H04 gene, mRNA (cDNA clone MGC:7693 IMAGE:3497476), complete cds Length = 1273 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 730 ctagaccttgctcatgcccc 749
>gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 tgtgaagttcttgacaccta 516 |||||||||||||||||||| Sbjct: 24604 tgtgaagttcttgacaccta 24623
>tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for collagen, type VI, alpha 3 and mlph gene for melanophilin Length = 212696 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 acctttgccaagggctggag 484 |||||||||||||||||||| Sbjct: 146122 acctttgccaagggctggag 146103
>emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed Doberman Length = 197532 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 acctttgccaagggctggag 484 |||||||||||||||||||| Sbjct: 145333 acctttgccaagggctggag 145314
>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete sequence Length = 126358 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctagaccttgctcatgcccc 448 |||||||||||||||||||| Sbjct: 78370 ctagaccttgctcatgcccc 78351
>emb|AL772174.11| Mouse DNA sequence from clone RP23-215D22 on chromosome 4, complete sequence Length = 178996 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ggaaagctagaagggaagag 631 |||||||||||||||||||| Sbjct: 102693 ggaaagctagaagggaagag 102674
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 623 agggaagagcacacagcaatgtgc 646 |||| ||||||||||||||||||| Sbjct: 218854 aggggagagcacacagcaatgtgc 218877 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,477,302 Number of Sequences: 3902068 Number of extensions: 5477302 Number of successful extensions: 92812 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92579 Number of HSP's gapped (non-prelim): 231 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
