ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT016379.1| Zea mays clone Contig212 mRNA sequence 206 6e-50
2gb|AY109331.1| Zea mays CL253_2 mRNA sequence 202 9e-49
3gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complet... 182 9e-43
4gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence 182 9e-43
5ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group... 174 2e-40
6ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA 174 2e-40
7gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, ... 174 2e-40
8dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
10dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
11dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
12gb|AY105867.1| Zea mays PCO143262 mRNA sequence 115 2e-22
13gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence 92 2e-15
14gb|AY105966.1| Zea mays PCO143261 mRNA sequence 92 2e-15
15gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-assoc... 78 4e-11
16gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G8... 78 4e-11
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
18dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
19dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
20dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
21dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
22dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
23dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
24dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
25dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
26gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82... 54 5e-04
27gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77... 50 0.008
28dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 50 0.008
29gb|AY137590.1| Oryza sativa (indica cultivar-group) multiple str... 46 0.13
30gb|AF140722.2| Oryza sativa (indica cultivar-group) multiple str... 46 0.13
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
32dbj|AK119793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
33dbj|AK106128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
34dbj|AK070140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
35dbj|AK061067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
36ref|NM_115140.2| Arabidopsis thaliana DNA binding / zinc ion bin... 44 0.51
37ref|XM_416311.1| PREDICTED: Gallus gallus similar to DIP13 beta;... 44 0.51
38gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosom... 44 0.51
39emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.51
40gb|AY072524.1| Arabidopsis thaliana zinc finger-like protein (At... 44 0.51
41gb|AY042871.1| Arabidopsis thaliana zinc finger-like protein (F3... 44 0.51
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
43dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
44gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, comp... 44 0.51
45gb|AC124471.4| Mus musculus BAC clone RP24-79D7 from 12, complet... 44 0.51
46gb|AC145942.4| Gallus gallus BAC clone CH261-21I23 from chromoso... 44 0.51
47gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 42 2.0
48emb|BX908807.1| Neurospora crassa DNA linkage group III BAC cont... 42 2.0
49emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.0
50emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 42 2.0
51emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 42 2.0
52emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in... 42 2.0
53gb|AY106416.1| Zea mays PCO123428 mRNA sequence 42 2.0
54gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.0
55ref|XM_527724.1| PREDICTED: Pan troglodytes similar to T-cell re... 40 7.9
56gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, comp... 40 7.9
57gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromo... 40 7.9
58ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@)... 40 7.9
59gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 7.9
60gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.9
61gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complet... 40 7.9
62emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, co... 40 7.9
63gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, comple... 40 7.9
64ref|XM_502694.1| Yarrowia lipolytica CLIB122, YALI0D11330g predi... 40 7.9
65emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chr... 40 7.9
66gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of ... 40 7.9
67dbj|AK165988.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 7.9
68gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus,... 40 7.9
69dbj|AK085193.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 7.9
70dbj|AK053817.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 7.9
71gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Canc... 40 7.9
72gb|AF222338.1|AF222338 Rattus norvegicus voltage gated N-type ca... 40 7.9
73emb|AL671536.8| Mouse DNA sequence from clone RP23-291O10 on chr... 40 7.9
74emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.9
75gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Can... 40 7.9
76gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 7.9
77gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 7.9
78ref|NM_001038635.1| Mus musculus serine/threonine kinase 35 (Stk... 40 7.9
79ref|NM_183262.2| Mus musculus serine/threonine kinase 35 (Stk35)... 40 7.9
80emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.9
81emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chr... 40 7.9
82gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 7.9

>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence
          Length = 1020

 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Plus

                                                                       
Query: 205 ccggtgcagcacctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaa 264
           |||||||||| ||||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 445 ccggtgcagcgcctgcaggaagagggttgggctcacgggattcaactgccggtgtgggaa 504

                                                                       
Query: 265 cctctactgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgc 324
           | | |||||||||   ||||||||||| ||||||||||| |||||||||||||||||  |
Sbjct: 505 cttgtactgcgcgctccaccgctactccgacaagcacgactgcaagttcgactaccggac 564

                                                                       
Query: 325 tgcggccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           ||| |||| ||||||||| |||||||| || |||||||||||||| || |||||||||||
Sbjct: 565 tgctgccagggacgccattgccaaggctaatccggtggtgaaggcagacaagctcgacaa 624

                   
Query: 385 gatctagg 392
           ||||||||
Sbjct: 625 gatctagg 632



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 7   gaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacgg 60
           ||||||||| |||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct: 232 gaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtgaacgg 285



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 840 tgttggctatgttgtgtaagc 860



to top

>gb|AY109331.1| Zea mays CL253_2 mRNA sequence
          Length = 2256

 Score =  202 bits (102), Expect = 9e-49
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                        
Query: 205  ccggtgcagcacctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaa 264
            |||||||||| ||||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1425 ccggtgcagcgcctgcaggaagagggttgggctcacgggattcaactgccggtgtgggaa 1484

                                                                        
Query: 265  cctctactgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgc 324
            | | |||||||||   ||||||||||| ||||||||||| |||||||||||||||||  |
Sbjct: 1485 cttgtactgcgcgctccaccgctactccgacaagcacgactgcaagttcgactaccggac 1544

                                                                        
Query: 325  tgcggccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
            ||| |||| ||||||||| |||||||| || |||||||||||||| || |||||||||||
Sbjct: 1545 tgctgccagggacgccattgccaaggctaatccggtggtgaaggcagacaagctcgacaa 1604

                  
Query: 385  gatcta 390
            ||||||
Sbjct: 1605 gatcta 1610



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 7    gaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacgg 60
            ||||||||| |||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct: 1212 gaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtgaacgg 1265



to top

>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds
          Length = 1000

 Score =  182 bits (92), Expect = 9e-43
 Identities = 164/188 (87%)
 Strand = Plus / Plus

                                                                       
Query: 205 ccggtgcagcacctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaa 264
           |||||||||| ||||||| |||||||| || || || ||||||||||||||||| |||||
Sbjct: 429 ccggtgcagcgcctgcaggaagagggttggacttacgggattcaactgccggtgtgggaa 488

                                                                       
Query: 265 cctctactgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgc 324
           | | ||||||||    ||||||||||| ||||||||||| |||||||||||||||||  |
Sbjct: 489 cttgtactgcgcactccaccgctactccgacaagcacgactgcaagttcgactaccggac 548

                                                                       
Query: 325 tgcggccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           ||| |||| ||||||||| |||||||| || |||||||||||||| || |||||||||||
Sbjct: 549 tgctgccagggacgccattgccaaggctaatccggtggtgaaggcagacaagctcgacaa 608

                   
Query: 385 gatctagg 392
           ||||||||
Sbjct: 609 gatctagg 616



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 7   gaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacgg 60
           ||||||||| |||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct: 216 gaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtgaacgg 269



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 822 tgttggctatgttgtgtaagc 842



to top

>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence
          Length = 941

 Score =  182 bits (92), Expect = 9e-43
 Identities = 164/188 (87%)
 Strand = Plus / Plus

                                                                       
Query: 205 ccggtgcagcacctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaa 264
           |||||||||| ||||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 451 ccggtgcagcgcctgcaggaagagggttgggctcacgggattcaactgccggtgtgggaa 510

                                                                       
Query: 265 cctctactgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgc 324
           | | ||||| |||   ||||| ||||| ||||||||||| |||||||||||||||||  |
Sbjct: 511 cttgtactgggcgctccaccggtactccgacaagcacgactgcaagttcgactaccggac 570

                                                                       
Query: 325 tgcggccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           ||| |||| ||||||||| |||||||| || |||||||||||||| || ||||||| |||
Sbjct: 571 tgctgccagggacgccattgccaaggctaatccggtggtgaaggcagacaagctcgccaa 630

                   
Query: 385 gatctagg 392
           ||||||||
Sbjct: 631 gatctagg 638



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 7   gaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacgg 60
           ||||||||| |||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct: 238 gaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtgaacgg 291



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 846 tgttggctatgttgtgtaagc 866



to top

>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15
           mRNA
          Length = 1000

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Plus

                                                                       
Query: 215 acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
           ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 506 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 565

                                                                       
Query: 275 gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
           |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 566 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 625

                                                                   
Query: 335 gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
           || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 626 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 681



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 5   atgaagcaggagcaggccaagctggccgcctcctc 39
           |||||| |||||||||||||||| || ||||||||
Sbjct: 284 atgaaggaggagcaggccaagcttgctgcctcctc 318



to top

>ref|XM_464458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 991

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Plus

                                                                       
Query: 215 acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
           ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 489 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 548

                                                                       
Query: 275 gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
           |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 549 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 608

                                                                   
Query: 335 gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
           || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 609 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 664



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 5   atgaagcaggagcaggccaagctggccgcctcctc 39
           |||||| |||||||||||||||| || ||||||||
Sbjct: 267 atgaaggaggagcaggccaagcttgctgcctcctc 301



to top

>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds
          Length = 1162

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Plus

                                                                       
Query: 205 ccggtgcagcacctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaa 264
           |||||||||| ||||||| || ||||| || || || ||||||||||||||||| |||||
Sbjct: 621 ccggtgcagcgcctgcaggaaaagggttggacttacgggattcaactgccggtgtgggaa 680

                                                                       
Query: 265 cctctactgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgc 324
           | | ||||||||    ||||||||||| ||||||||||| |||||||||||||||||  |
Sbjct: 681 cttgtactgcgcactccaccgctactccgacaagcacgactgcaagttcgactaccggac 740

                                                                       
Query: 325 tgcggccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           ||| |||| ||||||||| |||||||| || |||||||||||||| || |||||||||||
Sbjct: 741 tgctgccagggacgccattgccaaggctaatccggtggtgaaggcagacaagctcgacaa 800

                   
Query: 385 gatctagg 392
           ||||||||
Sbjct: 801 gatctagg 808



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 7   gaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgt 54
           ||||||||| |||||||||||||| ||||||||| | |||||||||||
Sbjct: 408 gaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgt 455



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 563  tgttggctatgttgtgtaagc 583
            |||||||||||||||||||||
Sbjct: 1017 tgttggctatgttgtgtaagc 1037



to top

>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full
           insert sequence
          Length = 991

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Plus

                                                                       
Query: 215 acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
           ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 489 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 548

                                                                       
Query: 275 gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
           |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 549 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 608

                                                                   
Query: 335 gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
           || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 609 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 664



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 5   atgaagcaggagcaggccaagctggccgcctcctc 39
           |||||| |||||||||||||||| || ||||||||
Sbjct: 267 atgaaggaggagcaggccaagcttgctgcctcctc 301



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Minus

                                                                           
Query: 215     acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
               ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 5346212 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 5346153

                                                                           
Query: 275     gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
               |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 5346152 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 5346093

                                                                       
Query: 335     gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
               || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 5346092 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 5346037



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 5       atgaagcaggagcaggccaagctggccgcctcctc 39
               |||||| |||||||||||||||| || ||||||||
Sbjct: 5346434 atgaaggaggagcaggccaagcttgctgcctcctc 5346400



to top

>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1225_F07
          Length = 142772

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Minus

                                                                         
Query: 215   acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
             ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 72515 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 72456

                                                                         
Query: 275   gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
             |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 72455 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 72396

                                                                     
Query: 335   gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
             || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 72395 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 72340



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 5     atgaagcaggagcaggccaagctggccgcctcctc 39
             |||||| |||||||||||||||| || ||||||||
Sbjct: 72737 atgaaggaggagcaggccaagcttgctgcctcctc 72703



to top

>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full
           insert sequence
          Length = 1000

 Score =  174 bits (88), Expect = 2e-40
 Identities = 154/176 (87%)
 Strand = Plus / Plus

                                                                       
Query: 215 acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
           ||||| || |||||||| ||||| || |||||||||||||||||||| ||| | ||||| 
Sbjct: 506 acctgtaggaagagggttgggctgacgggattcaactgccggtgcggtaacatgtactgt 565

                                                                       
Query: 275 gcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatg 334
           |||  |||||||||||| |||||||| || ||| |||||||||||||  ||||||| | |
Sbjct: 566 gcgttgcaccgctactccgacaagcatgaatgccagttcgactaccggactgcggctagg 625

                                                                   
Query: 335 gacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatcta 390
           || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 626 gatgccatcgccaaggccaacccagtggtgaaggctgagaagctcgacaagatcta 681



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 5   atgaagcaggagcaggccaagctggccgcctcctc 39
           |||||| |||||||||||||||| || ||||||||
Sbjct: 284 atgaaggaggagcaggccaagcttgctgcctcctc 318



to top

>gb|AY105867.1| Zea mays PCO143262 mRNA sequence
          Length = 984

 Score =  115 bits (58), Expect = 2e-22
 Identities = 121/142 (85%)
 Strand = Plus / Plus

                                                                       
Query: 248 aactgccggtgcgggaacctctactgcgcgacgcaccgctactcggacaagcacgagtgc 307
           |||||||| |||||||||   |||||  ||| |||||||||||| ||||| ||||| |||
Sbjct: 461 aactgccgatgcgggaacacgtactgttcgatgcaccgctactccgacaaacacgactgc 520

                                                                       
Query: 308 aagttcgactaccgcgctgcggccatggacgccatcgccaaggccaacccggtggtgaag 367
            |||||||||| ||  |||| || | |||||| |||||||||||||| || |||||||||
Sbjct: 521 cagttcgactatcgaactgcagctagggacgctatcgccaaggccaatccagtggtgaag 580

                                 
Query: 368 gcggagaagctcgacaagatct 389
           ||||||||||| ||||||||||
Sbjct: 581 gcggagaagcttgacaagatct 602



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 5   atgaagcaggagcaggccaagctggccgcctcctc 39
           |||||||||||||||||| || |||| ||||||||
Sbjct: 212 atgaagcaggagcaggcccagttggctgcctcctc 246



to top

>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence
          Length = 779

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 142/174 (81%)
 Strand = Plus / Plus

                                                                       
Query: 216 cctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcg 275
           ||||||| ||| | || ||||| || ||||| | |||||| ||||||||| | |||||  
Sbjct: 118 cctgcaggaagcgtgttgggctgacgggatttagctgccgatgcgggaacatgtactgtt 177

                                                                       
Query: 276 cgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatgg 335
           ||  |||||||||||| ||||| || || ||  |||||||||| ||  |||| || | ||
Sbjct: 178 cggtgcaccgctactccgacaaacatgactgtcagttcgactatcggactgcagcaaggg 237

                                                                 
Query: 336 acgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatct 389
           |||| || ||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 238 acgcgattgccaaggccaatcctgtggtgagggcggagaagctcgacaagatct 291



to top

>gb|AY105966.1| Zea mays PCO143261 mRNA sequence
          Length = 1035

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 142/174 (81%)
 Strand = Plus / Plus

                                                                       
Query: 216 cctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcg 275
           ||||||| ||| | || ||||| || ||||| | |||||| ||||||||| | |||||  
Sbjct: 430 cctgcaggaagcgtgttgggctgacgggatttagctgccgatgcgggaacatgtactgtt 489

                                                                       
Query: 276 cgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatgg 335
           ||  |||||||||||| ||||| || || ||  |||||||||| ||  |||| || | ||
Sbjct: 490 cggtgcaccgctactccgacaaacatgactgtcagttcgactatcggactgcagcaaggg 549

                                                                 
Query: 336 acgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatct 389
           |||| || ||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 550 acgcgattgccaaggccaatcctgtggtgagggcggagaagctcgacaagatct 603



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 7   gaagcaggagcaggccaagctggccgcctcctc 39
           |||||||||||||||| ||||||| ||||||||
Sbjct: 215 gaagcaggagcaggcccagctggctgcctcctc 247



to top

>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3
           (SAP-3) mRNA, complete cds
          Length = 1132

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 184 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 242



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 409 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 468

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 469 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 528

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 529 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 569



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 762 tgttggctatgttgtgtaagc 782



to top

>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence
          Length = 449

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 179 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 237



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 224 aagagggtcgggctcaccggattcaactgccg 255
           |||||||| || || |||||||||||||||||
Sbjct: 404 aagagggttggtcttaccggattcaactgccg 435



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 5        atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
                |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 24109529 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 24109587



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                            
Query: 224      aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
                |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 24109754 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 24109813

                                                                            
Query: 284      cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
                ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 24109814 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 24109873

                                                         
Query: 344      gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
                |||||||| || |||||||||||||||||||| || |||||
Sbjct: 24109874 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 24109914



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 563      tgttggctatgttgtgtaagc 583
                |||||||||||||||||||||
Sbjct: 24110107 tgttggctatgttgtgtaagc 24110127



to top

>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417G12
          Length = 163568

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 5     atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
             |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 42987 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 43045



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                         
Query: 224   aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
             |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 43212 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 43271

                                                                         
Query: 284   cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
             ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 43272 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 43331

                                                      
Query: 344   gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
             |||||||| || |||||||||||||||||||| || |||||
Sbjct: 43332 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 43372



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 563   tgttggctatgttgtgtaagc 583
             |||||||||||||||||||||
Sbjct: 43565 tgttggctatgttgtgtaagc 43585



to top

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0429G06
          Length = 158321

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                         
Query: 5      atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
              |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 119222 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 119280



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                          
Query: 224    aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
              |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 119447 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 119506

                                                                          
Query: 284    cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
              ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 119507 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 119566

                                                       
Query: 344    gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
              |||||||| || |||||||||||||||||||| || |||||
Sbjct: 119567 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 119607



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 563    tgttggctatgttgtgtaagc 583
              |||||||||||||||||||||
Sbjct: 119800 tgttggctatgttgtgtaagc 119820



to top

>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full
           insert sequence
          Length = 999

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 273 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 331



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 498 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 557

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 558 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 617

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 618 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 658



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 851 tgttggctatgttgtgtaagc 871



to top

>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full
           insert sequence
          Length = 1009

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 273 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 331



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 498 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 557

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 558 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 617

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 618 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 658



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 851 tgttggctatgttgtgtaagc 871



to top

>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full
           insert sequence
          Length = 1000

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 274 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 332



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 499 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 558

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 559 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 618

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 619 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 659



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 852 tgttggctatgttgtgtaagc 872



to top

>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full
           insert sequence
          Length = 1209

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 271 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 329



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 496 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 555

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 556 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 615

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 616 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 656



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 849 tgttggctatgttgtgtaagc 869



to top

>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full
           insert sequence
          Length = 1021

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5   atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacggtgg 63
           |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||
Sbjct: 270 atgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtcaatggtgg 328



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 495 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 554

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 555 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 614

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 615 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 655



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 848 tgttggctatgttgtgtaagc 868



to top

>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full
           insert sequence
          Length = 631

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 aagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgcgcgacgcac 283
           |||||||| || || ||||||||||||||||| || || ||| | |||||||| | ||||
Sbjct: 137 aagagggttggtcttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcac 196

                                                                       
Query: 284 cgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggccatggacgccatc 343
           ||||| || || ||||| || ||| |||| ||||| ||  | || || | ||| || || 
Sbjct: 197 cgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgctatt 256

                                                    
Query: 344 gccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           |||||||| || |||||||||||||||||||| || |||||
Sbjct: 257 gccaaggctaatccggtggtgaaggcggagaaacttgacaa 297



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 490 tgttggctatgttgtgtaagc 510



to top

>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence
          Length = 391

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 93/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 270 actgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcgg 329
           ||||||| ||||||||||| || || ||||| || ||| |||| ||||| ||  | || |
Sbjct: 1   actgcgcaacgcaccgctattccgataagcatgactgccagtttgactatcggaccgctg 60

                                                                  
Query: 330 ccatggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           | | ||| || || |||||||| || |||||||||||||||||||| || |||||
Sbjct: 61  ctagggatgctattgccaaggctaatccggtggtgaaggcggagaaacttgacaa 115



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 308 tgttggctatgttgtgtaagc 328



to top

>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence
          Length = 391

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgcgcgacgcaccgctactcggacaagcacgagtgcaagttcgactaccgcgctgcggcc 331
           ||||| ||||||||||| || || ||||| || ||| |||| ||||| ||  | || || 
Sbjct: 3   tgcgcaacgcaccgctattccgataagcatgactgccagtttgactatcggaccgctgct 62

                                                                
Query: 332 atggacgccatcgccaaggccaacccggtggtgaaggcggagaagctcgacaa 384
           | ||| || || |||||||| || |||||||||||||||||||| || |||||
Sbjct: 63  agggatgctattgccaaggctaatccggtggtgaaggcggagaaacttgacaa 115



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 563 tgttggctatgttgtgtaagc 583
           |||||||||||||||||||||
Sbjct: 308 tgttggctatgttgtgtaagc 328



to top

>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 341   atcgccaaggccaacccggtggtgaaggcggagaagctcgacaagatct 389
             ||||| ||||| ||||||||||||||||  ||||||||  |||||||||
Sbjct: 38700 atcgcgaaggcgaacccggtggtgaagggtgagaagctgaacaagatct 38652



to top

>gb|AY137590.1| Oryza sativa (indica cultivar-group) multiple stress-associated
            zinc-finger protein (OSISAP1) gene, complete cds
          Length = 3139

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 334  ggacgccatcgccaaggccaacccggtggtg 364
            |||||||||||||| || |||||||||||||
Sbjct: 2900 ggacgccatcgccagggacaacccggtggtg 2930



to top

>gb|AF140722.2| Oryza sativa (indica cultivar-group) multiple stress-responsive
           zinc-finger protein mRNA, complete cds
          Length = 844

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 334 ggacgccatcgccaaggccaacccggtggtg 364
           |||||||||||||| || |||||||||||||
Sbjct: 547 ggacgccatcgccagggacaacccggtggtg 577



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 334      ggacgccatcgccaaggccaacccggtggtg 364
                |||||||||||||| || |||||||||||||
Sbjct: 18592194 ggacgccatcgccagggacaacccggtggtg 18592224



to top

>dbj|AK119793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B06, full
           insert sequence
          Length = 708

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 334 ggacgccatcgccaaggccaacccggtggtg 364
           |||||||||||||| || |||||||||||||
Sbjct: 564 ggacgccatcgccagggacaacccggtggtg 594



to top

>dbj|AK106128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F08, full
           insert sequence
          Length = 914

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 334 ggacgccatcgccaaggccaacccggtggtg 364
           |||||||||||||| || |||||||||||||
Sbjct: 560 ggacgccatcgccagggacaacccggtggtg 590



to top

>dbj|AK070140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G11, full
           insert sequence
          Length = 860

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 334 ggacgccatcgccaaggccaacccggtggtg 364
           |||||||||||||| || |||||||||||||
Sbjct: 565 ggacgccatcgccagggacaacccggtggtg 595



to top

>dbj|AK061067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B12, full
           insert sequence
          Length = 870

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 334 ggacgccatcgccaaggccaacccggtggtg 364
           |||||||||||||| || |||||||||||||
Sbjct: 564 ggacgccatcgccagggacaacccggtggtg 594



to top

>ref|NM_115140.2| Arabidopsis thaliana DNA binding / zinc ion binding AT3G52800 mRNA,
           complete cds
          Length = 1129

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 228 gggtcgggctcaccggattcaactgccggtgcgg 261
           |||||||| | ||||||||||| |||||||||||
Sbjct: 602 gggtcgggttaaccggattcaagtgccggtgcgg 635



to top

>ref|XM_416311.1| PREDICTED: Gallus gallus similar to DIP13 beta; adaptor protein
            containing PH domain, PTB domain and leucine zipper motif
            2 (LOC418075), mRNA
          Length = 3201

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 77   gagcaccttgctgctggcagcacagc 102
            |||| |||||||||||||||||||||
Sbjct: 2268 gagccccttgctgctggcagcacagc 2293



to top

>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete
             sequence
          Length = 216041

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 555   ggtctccttgttggctatgttg 576
             ||||||||||||||||||||||
Sbjct: 81350 ggtctccttgttggctatgttg 81329



to top

>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 228   gggtcgggctcaccggattcaactgccggtgcgg 261
             |||||||| | ||||||||||| |||||||||||
Sbjct: 90635 gggtcgggttaaccggattcaagtgccggtgcgg 90668



to top

>gb|AY072524.1| Arabidopsis thaliana zinc finger-like protein (At3g52800;
           F3C22_200) mRNA, complete cds
          Length = 541

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 228 gggtcgggctcaccggattcaactgccggtgcgg 261
           |||||||| | ||||||||||| |||||||||||
Sbjct: 347 gggtcgggttaaccggattcaagtgccggtgcgg 380



to top

>gb|AY042871.1| Arabidopsis thaliana zinc finger-like protein (F3C22_200) mRNA,
           complete cds
          Length = 871

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 228 gggtcgggctcaccggattcaactgccggtgcgg 261
           |||||||| | ||||||||||| |||||||||||
Sbjct: 439 gggtcgggttaaccggattcaagtgccggtgcgg 472



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 353      aacccggtggtgaaggcggaga 374
                ||||||||||||||||||||||
Sbjct: 28232438 aacccggtggtgaaggcggaga 28232417



to top

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 353   aacccggtggtgaaggcggaga 374
             ||||||||||||||||||||||
Sbjct: 87983 aacccggtggtgaaggcggaga 87962



to top

>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence
          Length = 236969

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 86     gctgctggcagcacagcggtgg 107
              ||||||||||||||||||||||
Sbjct: 198806 gctgctggcagcacagcggtgg 198827



to top

>gb|AC124471.4| Mus musculus BAC clone RP24-79D7 from 12, complete sequence
          Length = 179503

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 86   gctgctggcagcacagcggtgg 107
            ||||||||||||||||||||||
Sbjct: 8422 gctgctggcagcacagcggtgg 8443



to top

>gb|AC145942.4| Gallus gallus BAC clone CH261-21I23 from chromosome unknown, complete
             sequence
          Length = 228603

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 77    gagcaccttgctgctggcagcacagc 102
             |||| |||||||||||||||||||||
Sbjct: 79122 gagccccttgctgctggcagcacagc 79147



to top

>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 328    ggccatggacgccatcgccaaggcc 352
              ||||||||| |||||||||||||||
Sbjct: 801439 ggccatggaggccatcgccaaggcc 801463



to top

>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7
          Length = 93134

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   cagcgaggcggccatggagag 189
             |||||||||||||||||||||
Sbjct: 87794 cagcgaggcggccatggagag 87774



to top

>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   gacgccatcgccaaggccaac 355
             |||||||||||||||||||||
Sbjct: 69376 gacgccatcgccaaggccaac 69356



to top

>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 335    gacgccatcgccaaggccaac 355
              |||||||||||||||||||||
Sbjct: 334200 gacgccatcgccaaggccaac 334180



to top

>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 335   gacgccatcgccaaggccaac 355
             |||||||||||||||||||||
Sbjct: 15235 gacgccatcgccaaggccaac 15255



to top

>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11,
             complete sequence
          Length = 128109

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 445   cgtgcgtctttgctgcattat 465
             |||||||||||||||||||||
Sbjct: 58828 cgtgcgtctttgctgcattat 58808



to top

>gb|AY106416.1| Zea mays PCO123428 mRNA sequence
          Length = 744

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                       
Query: 215 acctgcagaaagagggtcgggctcaccggattcaactgccggtgcgggaacctctactgc 274
           |||||| | ||| |||| |||||||| || |||  |||||| |||||  |||||| ||||
Sbjct: 33  acctgccgcaagcgggtggggctcacgggcttccgctgccgctgcggagacctcttctgc 92

                                
Query: 275 gcgacgcaccgctactcggac 295
           |   |||||||||||||||||
Sbjct: 93  ggcgcgcaccgctactcggac 113



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    cggtggtgaaggcggagaagc 377
              |||||||||||||||||||||
Sbjct: 199136 cggtggtgaaggcggagaagc 199156



to top

>ref|XM_527724.1| PREDICTED: Pan troglodytes similar to T-cell receptor gamma chain V
           region V108A precursor (LOC472349), mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 ctgcggccatggacgccatc 343
           ||||||||||||||||||||
Sbjct: 447 ctgcggccatggacgccatc 466



to top

>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence
          Length = 158864

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gcctcggcggcagccccagg 547
             ||||||||||||||||||||
Sbjct: 41200 gcctcggcggcagccccagg 41181



to top

>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete
             sequence
          Length = 206418

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gcctcggcggcagccccagg 547
             ||||||||||||||||||||
Sbjct: 88273 gcctcggcggcagccccagg 88254



to top

>ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@) on chromosome 7
          Length = 140728

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ctgcggccatggacgccatc 343
             ||||||||||||||||||||
Sbjct: 62403 ctgcggccatggacgccatc 62422



to top

>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the
            complete plasmid sequence
          Length = 10943

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 523  cacgcgcctcggcggcagcc 542
            ||||||||||||||||||||
Sbjct: 9594 cacgcgcctcggcggcagcc 9575



to top

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     ccatcgccaaggccaacccg 358
               ||||||||||||||||||||
Sbjct: 3710404 ccatcgccaaggccaacccg 3710423



to top

>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence
          Length = 171816

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    ctgcggccatggacgccatc 343
              ||||||||||||||||||||
Sbjct: 132444 ctgcggccatggacgccatc 132425



to top

>emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, complete sequence
          Length = 165531

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    tgcagcacctgcagaaagag 228
              ||||||||||||||||||||
Sbjct: 163125 tgcagcacctgcagaaagag 163144



to top

>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence
          Length = 157813

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    gcctcggcggcagccccagg 547
              ||||||||||||||||||||
Sbjct: 149842 gcctcggcggcagccccagg 149823



to top

>ref|XM_502694.1| Yarrowia lipolytica CLIB122, YALI0D11330g predicted mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 gacgccatcgccaaggccaa 354
           ||||||||||||||||||||
Sbjct: 598 gacgccatcgccaaggccaa 617



to top

>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22
              Contains the NUDT11 gene for nudix (nucleoside diphosphate
              linked moiety X)-type motif 11, two novel genes, the NUDT10
              gene for nudix (nucleoside diphosphate linked moiety
              X)-type motif 10 and three CpG islands, complete sequence
          Length = 184873

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 525    cgcgcctcggcggcagccccaggt 548
              |||||||||||||||||| |||||
Sbjct: 103024 cgcgcctcggcggcagccacaggt 103047



to top

>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome
          Length = 10329

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   agcaggccaagctggccgcc 34
            ||||||||||||||||||||
Sbjct: 2795 agcaggccaagctggccgcc 2776



to top

>dbj|AK165988.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730027B12 product:Similar to
            serine/threonine kinase 35 (Fragment) homolog [Mus
            musculus], full insert sequence
          Length = 5324

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  ggtggtgaaggcggagaagc 377
            ||||||||||||||||||||
Sbjct: 4021 ggtggtgaaggcggagaagc 4040



to top

>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence
          Length = 140691

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ctgcggccatggacgccatc 343
             ||||||||||||||||||||
Sbjct: 62398 ctgcggccatggacgccatc 62417



to top

>dbj|AK085193.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched
            library, clone:D530005H18 product:unclassifiable, full
            insert sequence
          Length = 3788

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  ggtggtgaaggcggagaagc 377
            ||||||||||||||||||||
Sbjct: 2488 ggtggtgaaggcggagaagc 2507



to top

>dbj|AK053817.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130309P10 product:unclassifiable, full
            insert sequence
          Length = 3812

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   tggcagcacagcggtggcag 110
            ||||||||||||||||||||
Sbjct: 3100 tggcagcacagcggtggcag 3081



to top

>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 222712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tggcagcacagcggtggcag 110
              ||||||||||||||||||||
Sbjct: 182206 tggcagcacagcggtggcag 182225



to top

>gb|AF222338.1|AF222338 Rattus norvegicus voltage gated N-type calcium channel alpha1B gene,
            partial cds, alternatively spliced
          Length = 6340

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 462  ttatcctttcatcatgctggcttc 485
            |||||||||| |||||||||||||
Sbjct: 2282 ttatcctttcctcatgctggcttc 2259



to top

>emb|AL671536.8| Mouse DNA sequence from clone RP23-291O10 on chromosome X, complete
              sequence
          Length = 221255

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    agagccccaaaggcccaagc 205
              ||||||||||||||||||||
Sbjct: 134084 agagccccaaaggcccaagc 134103



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     catggacgccatcgccaagg 350
               ||||||||||||||||||||
Sbjct: 4628177 catggacgccatcgccaagg 4628196



to top

>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 210862

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   tggcagcacagcggtggcag 110
            ||||||||||||||||||||
Sbjct: 8400 tggcagcacagcggtggcag 8419



to top

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     gacgccatcgccaaggccaa 354
               ||||||||||||||||||||
Sbjct: 1186651 gacgccatcgccaaggccaa 1186632



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     cgccatcgccaaggccaacc 356
               ||||||||||||||||||||
Sbjct: 4682836 cgccatcgccaaggccaacc 4682855



to top

>ref|NM_001038635.1| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant
            2, mRNA
          Length = 5401

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  ggtggtgaaggcggagaagc 377
            ||||||||||||||||||||
Sbjct: 4082 ggtggtgaaggcggagaagc 4101



to top

>ref|NM_183262.2| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant
            1, mRNA
          Length = 6151

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  ggtggtgaaggcggagaagc 377
            ||||||||||||||||||||
Sbjct: 4832 ggtggtgaaggcggagaagc 4851



to top

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     gacgccatcgccaaggccaa 354
               ||||||||||||||||||||
Sbjct: 1420923 gacgccatcgccaaggccaa 1420942



to top

>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete
              sequence
          Length = 199593

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ggtggtgaaggcggagaagc 377
              ||||||||||||||||||||
Sbjct: 185934 ggtggtgaaggcggagaagc 185953



to top

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      agcaccttgctgctggcagc 97
               ||||||||||||||||||||
Sbjct: 2924369 agcaccttgctgctggcagc 2924388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,033,337
Number of Sequences: 3902068
Number of extensions: 4033337
Number of successful extensions: 82622
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 81771
Number of HSP's gapped (non-prelim): 839
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top