ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
4dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
5gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome... 72 3e-09
6dbj|AK073861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
7gb|AY849874.1| Saccharum officinarum clone RGA-Q5 resistance gen... 64 6e-07
8ref|NM_194732.1| Oryza sativa (japonica cultivar-group) putative... 60 1e-05
9gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
10gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
13gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
14gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
15dbj|AK105448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
16dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
17emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 48 0.038
18gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
19gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
20dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
21dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
22gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome... 44 0.59
23gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 42 2.3
24gb|AC087835.2| Pan troglodytes clone RP43-93P21, complete sequence 42 2.3
25emb|CT025529.7| Mouse DNA sequence from clone RP23-153E24 on chr... 42 2.3
26gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complet... 42 2.3
27emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chro... 42 2.3
28gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park C... 42 2.3
29gb|AC099537.2| Homo sapiens chromosome 3 clone RP11-44E8, comple... 42 2.3
30gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complet... 42 2.3
31gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence 40 9.2
32ref|NM_001034753.1| Bos taurus chromosome 9 open reading frame 8... 40 9.2
33ref|XM_849397.1| PREDICTED: Canis familiaris similar to SH3 doma... 40 9.2
34gb|AC134446.4| Mus musculus BAC clone RP24-173D10 from chromosom... 40 9.2
35emb|CR718140.2|CNS0GH2A Tetraodon nigroviridis full-length cDNA 40 9.2
36ref|XM_533560.2| PREDICTED: Canis familiaris similar to RIKEN cD... 40 9.2
37gb|AC120779.24| Mus musculus strain C57BL/6J clone rp23-194d11 m... 40 9.2
38emb|AL445439.9| Human DNA sequence from clone RP11-357P24 on chr... 40 9.2
39emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 9.2
40emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in ... 40 9.2
41gb|AC010560.9| Drosophila melanogaster 3L BAC RPCI98-16K12 (Rosw... 40 9.2
42gb|BC112579.1| Bos taurus cDNA clone MGC:137092 IMAGE:8010043, c... 40 9.2
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
44gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Can... 40 9.2
45dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 9.2
46dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
47gb|BT021706.1| Bos taurus chromosome 9 open reading frame 89 (C9... 40 9.2
48dbj|AK100136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
49emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.2
50gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35... 40 9.2 
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0049B20, complete sequence
          Length = 131337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 155/180 (86%)
 Strand = Plus / Plus

                                                                         
Query: 412   cttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacggcaa 471
             |||||| |||||||| || |||||||| |||||  | |||||||||||||||||||||||
Sbjct: 84060 cttcaaccatctcgtgaggaggaagatcatacgtcccgtggagcacagcagcaacggcaa 84119

                                                                         
Query: 472   ggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaagtga 531
             |||||||| || ||||||||| ||||||||||| |||||||| || |||||||| |||||
Sbjct: 84120 ggtgaagaactgccaagtccatgacatggttcttgagtacatcgtgtccaaggcgagtga 84179

                                                                         
Query: 532   agaaaactttgtcaccgtggtcggcggccattggctcatggcgccacctagcaacaaagt 591
             ||| ||||| || || ||||| || ||  ||||||||||| ||||||| |||| ||||||
Sbjct: 84180 agagaacttcgtgacggtggttggagggtattggctcatgccgccacccagcagcaaagt 84239



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 143/178 (80%)
 Strand = Plus / Plus

                                                                         
Query: 230   accaggatactcagtcactgctacaatgatatgcctggtgagatcaagacttgctccttg 289
             ||||| |||||  |||| |||||||||||||||||||  ||| | | |||||||||  ||
Sbjct: 77532 accagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctg 77591

                                                                         
Query: 290   tatctgtgcatattcccaaaggggcgcaaggtcagcaggaagcggctgacgaggcgatgg 349
             || ||| | |||||||| || ||   |||| | ||||||||||||||||| |||||||||
Sbjct: 77592 tacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatgg 77651

                                                                       
Query: 350   ttagcagagagatttgtcagcgagaaagatgggctgagtgcagaggatgtcgcggagg 407
              |||| ||  | |||||||| |||||  | |||| |||||  |||||||| |||||||
Sbjct: 77652 atagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggagg 77709



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 81    tctgggaaatgtgtgggggtctgccattggccattgttaccatggctgg 129
             |||||||||||||  | || || |||||||||||||| |||||||||||
Sbjct: 77383 tctgggaaatgtgcagcgggcttccattggccattgtcaccatggctgg 77431
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  159 bits (80), Expect = 1e-35
 Identities = 155/180 (86%)
 Strand = Plus / Plus

                                                                            
Query: 412      cttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacggcaa 471
                |||||| |||||||| || |||||||| |||||  | |||||||||||||||||||||||
Sbjct: 27030772 cttcaaccatctcgtgaggaggaagatcatacgtcccgtggagcacagcagcaacggcaa 27030831

                                                                            
Query: 472      ggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaagtga 531
                |||||||| || ||||||||| ||||||||||| |||||||| || |||||||| |||||
Sbjct: 27030832 ggtgaagaactgccaagtccatgacatggttcttgagtacatcgtgtccaaggcgagtga 27030891

                                                                            
Query: 532      agaaaactttgtcaccgtggtcggcggccattggctcatggcgccacctagcaacaaagt 591
                ||| ||||| || || ||||| || ||  ||||||||||| ||||||| |||| ||||||
Sbjct: 27030892 agagaacttcgtgacggtggttggagggtattggctcatgccgccacccagcagcaaagt 27030951



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 143/178 (80%)
 Strand = Plus / Plus

                                                                            
Query: 230      accaggatactcagtcactgctacaatgatatgcctggtgagatcaagacttgctccttg 289
                ||||| |||||  |||| |||||||||||||||||||  ||| | | |||||||||  ||
Sbjct: 27024244 accagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctg 27024303

                                                                            
Query: 290      tatctgtgcatattcccaaaggggcgcaaggtcagcaggaagcggctgacgaggcgatgg 349
                || ||| | |||||||| || ||   |||| | ||||||||||||||||| |||||||||
Sbjct: 27024304 tacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatgg 27024363

                                                                          
Query: 350      ttagcagagagatttgtcagcgagaaagatgggctgagtgcagaggatgtcgcggagg 407
                 |||| ||  | |||||||| |||||  | |||| |||||  |||||||| |||||||
Sbjct: 27024364 atagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggagg 27024421



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                ||||||||||||||| ||||||||||| |||| | || |||||||| ||| |||||||||
Sbjct: 22568418 acagcagcaacggcagggtgaagagctgccaaattcatgacatggtcctccagtacattg 22568477

                        
Query: 516      tatccaag 523
                | ||||||
Sbjct: 22568478 tctccaag 22568485



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 511      cattgtatccaaggcaagtgaagaaaactttgt 543
                ||||||||||||||||| |||||||||||||||
Sbjct: 23860027 cattgtatccaaggcaattgaagaaaactttgt 23860059



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                            
Query: 447      ctgtggagcacagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcg 506
                ||||||| ||||||||| |||| || || |||| || ||| || || |||||| | ||||
Sbjct: 16235776 ctgtggatcacagcagcgacgggaaagttaagacctgccaggttcatgacatgatcctcg 16235835

                                                                            
Query: 507      agtacattgtatccaaggcaagtgaagaaaactttgtcaccgtggtcggcggccattggc 566
                |||||||  | |||||| | || || || |||||| |||||||||| ||||| || ||||
Sbjct: 16235836 agtacatcatgtccaagtccagcgaggagaactttatcaccgtggttggcgggcactggc 16235895

                     
Query: 567      tcatg 571
                |||||
Sbjct: 16235896 tcatg 16235900



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 22557279 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22557338

                       
Query: 516      tatccaa 522
                | |||||
Sbjct: 22557339 tctccaa 22557345



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 22455758 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22455699

                       
Query: 516      tatccaa 522
                | |||||
Sbjct: 22455698 tctccaa 22455692



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 321      tcagcaggaagcggctgacgaggcgatggttagc 354
                |||||||||||||| |||||||||||||| ||||
Sbjct: 16235650 tcagcaggaagcggttgacgaggcgatggatagc 16235683



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 81       tctgggaaatgtgtgggggtctgccattggccattgttaccatggctgg 129
                |||||||||||||  | || || |||||||||||||| |||||||||||
Sbjct: 27024095 tctgggaaatgtgcagcgggcttccattggccattgtcaccatggctgg 27024143



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 527      agtgaagaaaactttgtcaccgt 549
                |||||||||||||||||||||||
Sbjct: 15217542 agtgaagaaaactttgtcaccgt 15217564



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 92       tgtgggggtctgccattggccattgttaccatggctgg 129
                ||||||||  |||| ||||||||||| |||||||||||
Sbjct: 27110477 tgtgggggattgcctttggccattgtcaccatggctgg 27110514



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 91       gtgtgggggtctgccattggccattgttaccatggct 127
                |||||| |||||||||||||| ||| |||| ||||||
Sbjct: 23815199 gtgtggtggtctgccattggcaattattactatggct 23815235
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  159 bits (80), Expect = 1e-35
 Identities = 155/180 (86%)
 Strand = Plus / Plus

                                                                            
Query: 412      cttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacggcaa 471
                |||||| |||||||| || |||||||| |||||  | |||||||||||||||||||||||
Sbjct: 27357825 cttcaaccatctcgtgaggaggaagatcatacgtcccgtggagcacagcagcaacggcaa 27357884

                                                                            
Query: 472      ggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaagtga 531
                |||||||| || ||||||||| ||||||||||| |||||||| || |||||||| |||||
Sbjct: 27357885 ggtgaagaactgccaagtccatgacatggttcttgagtacatcgtgtccaaggcgagtga 27357944

                                                                            
Query: 532      agaaaactttgtcaccgtggtcggcggccattggctcatggcgccacctagcaacaaagt 591
                ||| ||||| || || ||||| || ||  ||||||||||| ||||||| |||| ||||||
Sbjct: 27357945 agagaacttcgtgacggtggttggagggtattggctcatgccgccacccagcagcaaagt 27358004



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 143/178 (80%)
 Strand = Plus / Plus

                                                                            
Query: 230      accaggatactcagtcactgctacaatgatatgcctggtgagatcaagacttgctccttg 289
                ||||| |||||  |||| |||||||||||||||||||  ||| | | |||||||||  ||
Sbjct: 27351297 accagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctg 27351356

                                                                            
Query: 290      tatctgtgcatattcccaaaggggcgcaaggtcagcaggaagcggctgacgaggcgatgg 349
                || ||| | |||||||| || ||   |||| | ||||||||||||||||| |||||||||
Sbjct: 27351357 tacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatgg 27351416

                                                                          
Query: 350      ttagcagagagatttgtcagcgagaaagatgggctgagtgcagaggatgtcgcggagg 407
                 |||| ||  | |||||||| |||||  | |||| |||||  |||||||| |||||||
Sbjct: 27351417 atagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggagg 27351474



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                ||||||||||||||| ||||||||||| |||| | || |||||||| ||| |||||||||
Sbjct: 22878329 acagcagcaacggcagggtgaagagctgccaaattcatgacatggtcctccagtacattg 22878388

                        
Query: 516      tatccaag 523
                | ||||||
Sbjct: 22878389 tctccaag 22878396



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 511      cattgtatccaaggcaagtgaagaaaactttgt 543
                ||||||||||||||||| |||||||||||||||
Sbjct: 24171696 cattgtatccaaggcaattgaagaaaactttgt 24171728



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                            
Query: 447      ctgtggagcacagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcg 506
                ||||||| ||||||||| |||| || || |||| || ||| || || |||||| | ||||
Sbjct: 16325758 ctgtggatcacagcagcgacgggaaagttaagacctgccaggttcatgacatgatcctcg 16325817

                                                                            
Query: 507      agtacattgtatccaaggcaagtgaagaaaactttgtcaccgtggtcggcggccattggc 566
                |||||||  | |||||| | || || || |||||| |||||||||| ||||| || ||||
Sbjct: 16325818 agtacatcatgtccaagtccagcgaggagaactttatcaccgtggttggcgggcactggc 16325877

                     
Query: 567      tcatg 571
                |||||
Sbjct: 16325878 tcatg 16325882



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 22867190 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22867249

                       
Query: 516      tatccaa 522
                | |||||
Sbjct: 22867250 tctccaa 22867256



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 456      acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
                |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 22765669 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22765610

                       
Query: 516      tatccaa 522
                | |||||
Sbjct: 22765609 tctccaa 22765603



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 321      tcagcaggaagcggctgacgaggcgatggttagc 354
                |||||||||||||| |||||||||||||| ||||
Sbjct: 16325632 tcagcaggaagcggttgacgaggcgatggatagc 16325665



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 81       tctgggaaatgtgtgggggtctgccattggccattgttaccatggctgg 129
                |||||||||||||  | || || |||||||||||||| |||||||||||
Sbjct: 27351148 tctgggaaatgtgcagcgggcttccattggccattgtcaccatggctgg 27351196



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 527      agtgaagaaaactttgtcaccgt 549
                |||||||||||||||||||||||
Sbjct: 15299041 agtgaagaaaactttgtcaccgt 15299063



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 92       tgtgggggtctgccattggccattgttaccatggctgg 129
                ||||||||  |||| ||||||||||| |||||||||||
Sbjct: 27437530 tgtgggggattgcctttggccattgtcaccatggctgg 27437567



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 91       gtgtgggggtctgccattggccattgttaccatggct 127
                |||||| |||||||||||||| ||| |||| ||||||
Sbjct: 24126868 gtgtggtggtctgccattggcaattattactatggct 24126904
to top
>dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H03, full
            insert sequence
          Length = 2323

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 143/178 (80%)
 Strand = Plus / Plus

                                                                        
Query: 230  accaggatactcagtcactgctacaatgatatgcctggtgagatcaagacttgctccttg 289
            ||||| |||||  |||| |||||||||||||||||||  ||| | | |||||||||  ||
Sbjct: 2087 accagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctg 2146

                                                                        
Query: 290  tatctgtgcatattcccaaaggggcgcaaggtcagcaggaagcggctgacgaggcgatgg 349
            || ||| | |||||||| || ||   |||| | ||||||||||||||||| |||||||||
Sbjct: 2147 tacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatgg 2206

                                                                      
Query: 350  ttagcagagagatttgtcagcgagaaagatgggctgagtgcagaggatgtcgcggagg 407
             |||| ||  | |||||||| |||||  | |||| |||||  |||||||| |||||||
Sbjct: 2207 atagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggagg 2264



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                             
Query: 81   tctgggaaatgtgtgggggtctgccattggccattgttaccatggctgg 129
            |||||||||||||  | || || |||||||||||||| |||||||||||
Sbjct: 1938 tctgggaaatgtgcagcgggcttccattggccattgtcaccatggctgg 1986
to top
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0030E22, complete sequence
          Length = 135468

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                          
Query: 456    acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
              ||||||||||||||| ||||||||||| |||| | || |||||||| ||| |||||||||
Sbjct: 125563 acagcagcaacggcagggtgaagagctgccaaattcatgacatggtcctccagtacattg 125622

                      
Query: 516    tatccaag 523
              | ||||||
Sbjct: 125623 tctccaag 125630



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                          
Query: 456    acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
              |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 114424 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 114483

                     
Query: 516    tatccaa 522
              | |||||
Sbjct: 114484 tctccaa 114490



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 456   acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
             |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 12903 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 12844

                    
Query: 516   tatccaa 522
             | |||||
Sbjct: 12843 tctccaa 12837
to top
>dbj|AK073861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071G16, full
            insert sequence
          Length = 2395

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 456  acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
            ||||||||||||||| ||||||||||| |||| | || |||||||| ||| |||||||||
Sbjct: 1793 acagcagcaacggcagggtgaagagctgccaaattcatgacatggtcctccagtacattg 1734

                    
Query: 516  tatccaag 523
            | ||||||
Sbjct: 1733 tctccaag 1726
to top
>gb|AY849874.1| Saccharum officinarum clone RGA-Q5 resistance gene-like mRNA,
           complete sequence
          Length = 598

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 87/106 (82%)
 Strand = Plus / Plus

                                                                       
Query: 233 aggatactcagtcactgctacaatgatatgcctggtgagatcaagacttgctccttgtat 292
           |||||| ||| | ||||||||||||| |||||| |||| ||||||| |||||| ||||||
Sbjct: 428 aggataatcaattactgctacaatgacatgcctagtgatatcaagatttgctctttgtat 487

                                                         
Query: 293 ctgtgcatattcccaaaggggcgcaaggtcagcaggaagcggctga 338
           ||  ||||||| || || || || || || || |||| ||||||||
Sbjct: 488 ctaagcatatttcctaaaggccggaaagttagtaggargcggctga 533



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 tgccattggccattgttaccatggc 126
           ||||||||||||| |||||||||||
Sbjct: 297 tgccattggccatagttaccatggc 321
to top
>ref|NM_194732.1| Oryza sativa (japonica cultivar-group) putative disease resistance
           protein (OSJNBb0004A06.4), mRNA
          Length = 2325

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/126 (80%)
 Strand = Plus / Plus

                                                                       
Query: 409 atacttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacgg 468
           ||||||||||||| |  ||||||| ||| | |||||  ||||||||||||||||||||||
Sbjct: 855 atacttcaatcatattttaagaagaaagttgatacgtcctgtggagcacagcagcaacgg 914

                                                                       
Query: 469 caaggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaag 528
            ||  | || | ||  ||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 915 gaaactaaaaacctttcaagttcatgacatggttcttgactatattgtgaccaaggcaag 974

                 
Query: 529 tgaaga 534
            |||||
Sbjct: 975 agaaga 980



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 91  gtgtgggggtctgccattggccattgttaccatggctgg 129
           ||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 510 gtgtgggggtcagcctttggccatagttaccatggctgg 548
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                           
Query: 409     atacttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacgg 468
               ||||||||||||| |  ||||||| ||| | |||||  ||||||||||||||||||||||
Sbjct: 1930118 atacttcaatcatattttaagaagaaagttgatacgtcctgtggagcacagcagcaacgg 1930059

                                                                           
Query: 469     caaggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaag 528
                ||  | || | ||  ||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 1930058 gaaactaaaaacctttcaagttcatgacatggttcttgactatattgtgaccaaggcaag 1929999

                     
Query: 529     tgaaga 534
                |||||
Sbjct: 1929998 agaaga 1929993



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 91      gtgtgggggtctgccattggccattgttaccatggctgg 129
               ||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 1930463 gtgtgggggtcagcctttggccatagttaccatggctgg 1930425
to top
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0004A06, complete sequence
          Length = 153510

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                         
Query: 409   atacttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacgg 468
             ||||||||||||| |  ||||||| ||| | |||||  ||||||||||||||||||||||
Sbjct: 20847 atacttcaatcatattttaagaagaaagttgatacgtcctgtggagcacagcagcaacgg 20788

                                                                         
Query: 469   caaggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaag 528
              ||  | || | ||  ||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 20787 gaaactaaaaacctttcaagttcatgacatggttcttgactatattgtgaccaaggcaag 20728

                   
Query: 529   tgaaga 534
              |||||
Sbjct: 20727 agaaga 20722



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 91    gtgtgggggtctgccattggccattgttaccatggctgg 129
             ||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 21192 gtgtgggggtcagcctttggccatagttaccatggctgg 21154
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                           
Query: 409     atacttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacgg 468
               ||||||||||||| |  ||||||| ||| | |||||  ||||||||||||||||||||||
Sbjct: 1930118 atacttcaatcatattttaagaagaaagttgatacgtcctgtggagcacagcagcaacgg 1930059

                                                                           
Query: 469     caaggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaag 528
                ||  | || | ||  ||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 1930058 gaaactaaaaacctttcaagttcatgacatggttcttgactatattgtgaccaaggcaag 1929999

                     
Query: 529     tgaaga 534
                |||||
Sbjct: 1929998 agaaga 1929993



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 91      gtgtgggggtctgccattggccattgttaccatggctgg 129
               ||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 1930463 gtgtgggggtcagcctttggccatagttaccatggctgg 1930425
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                           
Query: 409     atacttcaatcatctcgtaagaaggaagattatacgggctgtggagcacagcagcaacgg 468
               ||||||||||||| |  ||||||| ||| | |||||  ||||||||||||||||||||||
Sbjct: 1930069 atacttcaatcatattttaagaagaaagttgatacgtcctgtggagcacagcagcaacgg 1930010

                                                                           
Query: 469     caaggtgaagagctaccaagtccacgacatggttctcgagtacattgtatccaaggcaag 528
                ||  | || | ||  ||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 1930009 gaaactaaaaacctttcaagttcatgacatggttcttgactatattgtgaccaaggcaag 1929950

                     
Query: 529     tgaaga 534
                |||||
Sbjct: 1929949 agaaga 1929944



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 91      gtgtgggggtctgccattggccattgttaccatggctgg 129
               ||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 1930414 gtgtgggggtcagcctttggccatagttaccatggctgg 1930376
to top
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11,
              complete sequence
          Length = 143925

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                          
Query: 447    ctgtggagcacagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcg 506
              ||||||| ||||||||| |||| || || |||| || ||| || || |||||| | ||||
Sbjct: 100631 ctgtggatcacagcagcgacgggaaagttaagacctgccaggttcatgacatgatcctcg 100690

                                                                          
Query: 507    agtacattgtatccaaggcaagtgaagaaaactttgtcaccgtggtcggcggccattggc 566
              |||||||  | |||||| | || || || |||||| |||||||||| ||||| || ||||
Sbjct: 100691 agtacatcatgtccaagtccagcgaggagaactttatcaccgtggttggcgggcactggc 100750

                   
Query: 567    tcatg 571
              |||||
Sbjct: 100751 tcatg 100755



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 321    tcagcaggaagcggctgacgaggcgatggttagc 354
              |||||||||||||| |||||||||||||| ||||
Sbjct: 100505 tcagcaggaagcggttgacgaggcgatggatagc 100538
to top
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0016O23, complete sequence
          Length = 149400

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 511   cattgtatccaaggcaagtgaagaaaactttgt 543
             ||||||||||||||||| |||||||||||||||
Sbjct: 48842 cattgtatccaaggcaattgaagaaaactttgt 48874



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 91   gtgtgggggtctgccattggccattgttaccatggct 127
            |||||| |||||||||||||| ||| |||| ||||||
Sbjct: 4014 gtgtggtggtctgccattggcaattattactatggct 4050
to top
>dbj|AK105448.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B08, full
            insert sequence
          Length = 2335

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 456  acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
            |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 1639 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 1580

                   
Query: 516  tatccaa 522
            | |||||
Sbjct: 1579 tctccaa 1573
to top
>dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020O22, full
            insert sequence
          Length = 3275

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 456  acagcagcaacggcaaggtgaagagctaccaagtccacgacatggttctcgagtacattg 515
            |||||||||| || |||||||||||||  ||| | || |||||||| || ||||||||||
Sbjct: 1561 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 1620

                   
Query: 516  tatccaa 522
            | |||||
Sbjct: 1621 tctccaa 1627
to top
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 521    aaggcaagtgaagaaaactttgtc 544
              ||||||||||||||||||||||||
Sbjct: 769084 aaggcaagtgaagaaaactttgtc 769061
to top
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0006N14, complete sequence
          Length = 155730

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 527   agtgaagaaaactttgtcaccgt 549
             |||||||||||||||||||||||
Sbjct: 73175 agtgaagaaaactttgtcaccgt 73197
to top
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0047M04, complete sequence
          Length = 109523

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 92    tgtgggggtctgccattggccattgttaccatggctgg 129
             ||||||||  |||| ||||||||||| |||||||||||
Sbjct: 61530 tgtgggggattgcctttggccattgtcaccatggctgg 61567
to top
>dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D06, full
            insert sequence
          Length = 2265

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 92   tgtgggggtctgccattggccattgttaccatggctgg 129
            ||||||||  |||| ||||||||||| |||||||||||
Sbjct: 1362 tgtgggggattgcctttggccattgtcaccatggctgg 1399
to top
>dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065D18, full
            insert sequence
          Length = 3778

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 92   tgtgggggtctgccattggccattgttaccatggctgg 129
            ||||||||  |||| ||||||||||| |||||||||||
Sbjct: 1731 tgtgggggattgcctttggccattgtcaccatggctgg 1768
to top
>gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome 16, complete sequence
          Length = 206740

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 622   gaaacacaagaaatcaatggag 643
             ||||||||||||||||||||||
Sbjct: 84836 gaaacacaagaaatcaatggag 84815
to top
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaagaaaatcaggagaaaatt 70
               |||||||||||||||||||||
Sbjct: 1585222 aaagaaaatcaggagaaaatt 1585202
to top
>gb|AC087835.2| Pan troglodytes clone RP43-93P21, complete sequence
          Length = 162681

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     aaagaaaatcaggagaaaatt 70
              |||||||||||||||||||||
Sbjct: 124419 aaagaaaatcaggagaaaatt 124399
to top
>emb|CT025529.7| Mouse DNA sequence from clone RP23-153E24 on chromosome 16, complete
             sequence
          Length = 187241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 80    ctctgggaaatgtgtgggggtctgccatt 108
             |||||||||||||| ||| ||||||||||
Sbjct: 36587 ctctgggaaatgtgggggtgtctgccatt 36615
to top
>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence
          Length = 207802

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   ggccattgttaccatggctgg 129
             |||||||||||||||||||||
Sbjct: 38906 ggccattgttaccatggctgg 38926
to top
>emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chromosome 1, complete
             sequence
          Length = 164200

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 38    gtggacaagcctaaagaaaatcaggagaa 66
             ||||||||  |||||||||||||||||||
Sbjct: 84260 gtggacaaaactaaagaaaatcaggagaa 84232
to top
>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216123

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     ctaaagaaaatcaggagaaaa 68
              |||||||||||||||||||||
Sbjct: 156897 ctaaagaaaatcaggagaaaa 156877
to top
>gb|AC099537.2| Homo sapiens chromosome 3 clone RP11-44E8, complete sequence
          Length = 156512

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 635    tcaatggagagcatgaatttt 655
              |||||||||||||||||||||
Sbjct: 103158 tcaatggagagcatgaatttt 103178
to top
>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence
          Length = 182776

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    ctaaagaaaatcaggagaaaa 68
             |||||||||||||||||||||
Sbjct: 78624 ctaaagaaaatcaggagaaaa 78604
to top
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence
          Length = 258544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    aaattccagccagactctgg 85
             ||||||||||||||||||||
Sbjct: 14818 aaattccagccagactctgg 14837
to top
>ref|NM_001034753.1| Bos taurus chromosome 9 open reading frame 89 (C9orf89), mRNA
          Length = 928

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 aaggtcagcaggaagcggctgacg 340
           |||| |||||||||||||||||||
Sbjct: 753 aaggccagcaggaagcggctgacg 730
to top
>ref|XM_849397.1| PREDICTED: Canis familiaris similar to SH3 domain-containing adapter
            protein (LOC611699), mRNA
          Length = 3279

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  ccagacaaactggtggacaa 165
            ||||||||||||||||||||
Sbjct: 2425 ccagacaaactggtggacaa 2406
to top
>gb|AC134446.4| Mus musculus BAC clone RP24-173D10 from chromosome 17, complete
             sequence
          Length = 131657

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cttgcaatccagacaaactg 157
             ||||||||||||||||||||
Sbjct: 85407 cttgcaatccagacaaactg 85426
to top
>emb|CR718140.2|CNS0GH2A Tetraodon nigroviridis full-length cDNA
          Length = 972

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 gtgagatcaagacttgctcc 286
           ||||||||||||||||||||
Sbjct: 783 gtgagatcaagacttgctcc 802
to top
>ref|XM_533560.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 1110007C09
           (LOC476359), mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 aaggtcagcaggaagcggctgacg 340
           |||| |||||||||||||||||||
Sbjct: 589 aaggccagcaggaagcggctgacg 566
to top
>gb|AC120779.24| Mus musculus strain C57BL/6J clone rp23-194d11 map 17, complete
             sequence
          Length = 235634

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cttgcaatccagacaaactg 157
             ||||||||||||||||||||
Sbjct: 78193 cttgcaatccagacaaactg 78212
to top
>emb|AL445439.9| Human DNA sequence from clone RP11-357P24 on chromosome 6 Contains the
             5' end of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM) and a mesoderm
             specific transcript homolog (mouse) (MEST) (PEG1)
             pseudogene, complete sequence
          Length = 167025

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   agtgaagaaaactttgtcac 546
             ||||||||||||||||||||
Sbjct: 16536 agtgaagaaaactttgtcac 16517
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    attggctcatggcgccacct 580
              ||||||||||||||||||||
Sbjct: 183286 attggctcatggcgccacct 183267
to top
>emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in linkage group 4 Contains
             the gene for a novel protein similar to vertebrate
             selenoprotein family, the gene for a novel protein similar
             to vertebrate vascular endothelial growth factor (VEGF),
             the gene for a novel protein similar to vertebrate
             mitogen-activated protein kinase family, the gene for a
             novel protein similar to vertebrate mitogen-activated
             protein kinase family, the gene for a novel protein
             similar to vertebrate scavenger receptor protein, two
             genes for novel proteins similar to vertebrate protein
             deleted in malignant brain tumors 1, fifteen novel genes
             and three CpG islands, complete sequence
          Length = 264155

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tccagccagactctgggaaa 89
             ||||||||||||||||||||
Sbjct: 31531 tccagccagactctgggaaa 31512
to top
>gb|AC010560.9| Drosophila melanogaster 3L BAC RPCI98-16K12 (Roswell Park Cancer
              Institute Drosophila BAC library) complete sequence
          Length = 167595

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     aggagaaaattccagccagactct 83
              ||||||||| ||||||||||||||
Sbjct: 103610 aggagaaaaatccagccagactct 103587
to top
>gb|BC112579.1| Bos taurus cDNA clone MGC:137092 IMAGE:8010043, complete cds
          Length = 2408

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 317  aaggtcagcaggaagcggctgacg 340
            |||| |||||||||||||||||||
Sbjct: 2076 aaggccagcaggaagcggctgacg 2053
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 368      agcgagaaagatgggctgag 387
                ||||||||||||||||||||
Sbjct: 16987356 agcgagaaagatgggctgag 16987337
to top
>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 630    agaaatcaatggagagcatgaatt 653
              |||||||| |||||||||||||||
Sbjct: 108600 agaaatcattggagagcatgaatt 108577
to top
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    gggctgtggagcacagcagc 463
              ||||||||||||||||||||
Sbjct: 666292 gggctgtggagcacagcagc 666311
to top
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    agcgagaaagatgggctgag 387
              ||||||||||||||||||||
Sbjct: 117169 agcgagaaagatgggctgag 117150
to top
>gb|BT021706.1| Bos taurus chromosome 9 open reading frame 89 (C9orf89), mRNA,
           complete cds
          Length = 928

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 aaggtcagcaggaagcggctgacg 340
           |||| |||||||||||||||||||
Sbjct: 753 aaggccagcaggaagcggctgacg 730
to top
>dbj|AK100136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H12, full
            insert sequence
          Length = 4892

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 527  agtgaagaaaactttgtcac 546
            ||||||||||||||||||||
Sbjct: 1837 agtgaagaaaactttgtcac 1856
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    cgtggtcggcggccattggc 566
              ||||||||||||||||||||
Sbjct: 502902 cgtggtcggcggccattggc 502921
to top
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete
              sequence
          Length = 304975

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     aggagaaaattccagccagactct 83
              ||||||||| ||||||||||||||
Sbjct: 238456 aggagaaaaatccagccagactct 238479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,600,077
Number of Sequences: 3902068
Number of extensions: 5600077
Number of successful extensions: 101134
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100676
Number of HSP's gapped (non-prelim): 454
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top