>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor|
            (Protein starry night) (Protein flamingo)
          Length = 3574

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -1

Query: 286  DSAIS-RGVLGSRCRCSLSTVLAGSGRSSILPSGCHGRWWRWLHVWWRCVLQFRQDLAHP 110
            D+AI+  G LG R  C+  T L    R S+L   CH    R+L            DL  P
Sbjct: 1661 DTAIALSGQLGDRWSCANRTTLKLDKRCSLLTETCH----RFL------------DLTGP 1704

Query: 109  CHVGGLPRLGA 77
              VGGLPR+ A
Sbjct: 1705 LQVGGLPRIPA 1715

>JAG1A_BRARE (Q90Y57) Jagged-1a precursor (Jagged1a) (Jagged1)|
          Length = 1242

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = +1

Query: 247 DTCCQGRPC*--WHCP*DGEGRTRCRCPRGSSSCTTS*AHRSCLNEGGFGQPLILRSRVI 420
           +TC   +PC     C   G  +  C CP G S      A  +CL+E      L + S + 
Sbjct: 299 NTCGTLQPCLNGGTCSNTGPDKYHCACPDGYSGQNCERADNACLSEPCLNGGLCVESSLG 358

Query: 421 FGCQ 432
           F CQ
Sbjct: 359 FECQ 362

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 4   RHEDTSKEDGEERQGQEARNHRGPGPQAWEGHRHGTDAP 120
           R  +   ED E   G  +RNH G    AWE  R G+  P
Sbjct: 301 RDSEGHSEDSERHSGSASRNHHG---SAWEQSRDGSRHP 336

>TREF1_MOUSE (Q8BXJ2) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132)
          Length = 1205

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 383 PPSFRQLRWAQLVVQELLPRGQRQRVRPSPSQGQCH*QGRPWQQVSLQ 240
           PP  +Q    ++ VQE+  + Q Q++RPSP Q Q        QQ+ LQ
Sbjct: 274 PPQQQQAGLQRISVQEMQQQQQPQQIRPSPPQQQ--------QQLQLQ 313

>AMELY_BOVIN (Q99004) Amelogenin, Y isoform precursor (Class II amelogenin)|
          Length = 192

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 257 QQVSLQP*HRPCRQRPELHPSQRLPRQ 177
           Q +  QP H+P + +P +HP QRLP Q
Sbjct: 131 QPIQPQP-HQPLQPQPPVHPIQRLPPQ 156

>AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor|
          Length = 191

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 335 LLPRGQRQRVRPSPSQGQCH*QGRPWQQVSLQP*-HRPCRQRPELHPSQRLPRQ 177
           + P    Q   P P+Q       +P+Q   +QP  H+P + +P +HP Q LP Q
Sbjct: 109 MTPIQHHQPNLPPPAQ-------QPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQ 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,998,084
Number of Sequences: 219361
Number of extensions: 1669746
Number of successful extensions: 5034
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5026
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)