ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12n04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105627.1| Zea mays PCO089890 mRNA sequence 131 3e-27
2gb|BT016392.1| Zea mays clone Contig225 mRNA sequence 117 4e-23
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
5dbj|AK069288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6gb|BT018962.1| Zea mays clone Contig296.F mRNA sequence 46 0.13
7gb|AC034200.6|AC034200 Homo sapiens chromosome 5 clone CTB-135C1... 46 0.13
8gb|AC091393.3| Homo sapiens chromosome 5 clone CTC-571O20, compl... 46 0.13
9gb|AY111854.1| Zea mays CL20029_1 mRNA sequence 46 0.13
10ref|XM_474364.1| Oryza sativa (japonica cultivar-group), predic... 44 0.51
11ref|XM_477500.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.51
12emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 44 0.51
13emb|CR385386.1| Gallus gallus finished cDNA, clone ChEST605l4 44 0.51
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
16dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
17dbj|AK103034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
18emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.51
19emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chrom... 44 0.51
20gb|AC154202.2| Mus musculus BAC clone RP24-386E14 from chromosom... 42 2.0
21gb|BC007897.2| Homo sapiens proteasome (prosome, macropain) 26S ... 42 2.0
22gb|AC161509.8| Mus musculus chromosome 7, clone RP23-53O17, comp... 42 2.0
23ref|NM_002808.3| Homo sapiens proteasome (prosome, macropain) 26... 42 2.0
24gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosom... 42 2.0
25ref|XM_540136.2| PREDICTED: Canis familiaris similar to anaplast... 42 2.0
26gb|BC001671.2| Homo sapiens CGI-130 protein, mRNA (cDNA clone IM... 42 2.0
27emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on ch... 42 2.0
28gb|BT009736.1| Homo sapiens proteasome (prosome, macropain) 26S ... 42 2.0
29gb|BT009735.1| Synthetic construct Homo sapiens proteasome (pros... 42 2.0
30emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O... 42 2.0
31emb|CR620212.1| full-length cDNA clone CS0DK010YG02 of HeLa cell... 42 2.0
32dbj|AK095245.1| Homo sapiens cDNA FLJ37926 fis, clone CTONG20009... 42 2.0
33emb|CR600526.1| full-length cDNA clone CS0DG006YE16 of B cells (... 42 2.0
34gb|AC078797.20| Homo sapiens 3 BAC RP11-125E8 (Roswell Park Canc... 42 2.0
35gb|AY892426.1| Synthetic construct Homo sapiens clone FLH022847.... 42 2.0
36gb|AY892425.1| Synthetic construct Homo sapiens clone FLH022846.... 42 2.0
37gb|AY889948.1| Synthetic construct Homo sapiens clone FLH022851.... 42 2.0
38gb|AY889947.1| Synthetic construct Homo sapiens clone FLH022850.... 42 2.0
39ref|XM_309113.2| Anopheles gambiae str. PEST ENSANGP00000020537 ... 42 2.0
40ref|XM_308229.2| Anopheles gambiae str. PEST ENSANGP00000020719 ... 42 2.0
41gb|BC002368.2| Homo sapiens proteasome (prosome, macropain) 26S ... 42 2.0
42gb|BC002997.1| Homo sapiens proteasome (prosome, macropain) 26S ... 42 2.0
43gb|AC102117.13| Mus musculus chromosome 7, clone RP23-154P9, com... 42 2.0
44dbj|AB209843.1| Homo sapiens mRNA for proteasome 26S non-ATPase ... 42 2.0
45gb|U12596.1|HSU12596 Human tumor necrosis factor type 1 receptor... 42 2.0
46emb|X86446.1|HSRNA5511 H.sapiens mRNA for 55.11 binding protein 42 2.0
47dbj|D78151.1|HUM26SPSP Human mRNA for 26S proteasome subunit p97... 42 2.0
48gb|AY556462.1| Saguinus oedipus glandular kallikrein 2 pseudogen... 40 8.0
49gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 8.0
50ref|XM_512304.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 8.0
51ref|XM_477978.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.0
52gb|BC081047.1| Xenopus laevis MGC81799 protein, mRNA (cDNA clone... 40 8.0
53ref|XM_420591.1| PREDICTED: Gallus gallus similar to septin 11 (... 40 8.0
54gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 8.0
55ref|NM_020175.1| Homo sapiens dihydrouridine synthase 3-like (S.... 40 8.0
56gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome... 40 8.0
57gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, com... 40 8.0
58ref|XM_804176.1| Trypanosoma cruzi strain CL Brener heat shock p... 40 8.0
59ref|XM_812539.1| Trypanosoma cruzi strain CL Brener heat shock p... 40 8.0
60ref|NM_006032.2| Homo sapiens copine VI (neuronal) (CPNE6), mRNA 40 8.0
61emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chro... 40 8.0
62ref|XM_501302.1| Yarrowia lipolytica CLIB122, YALI0C00825g predi... 40 8.0
63emb|AL365366.20| Human DNA sequence from clone RP11-553N16 on ch... 40 8.0
64emb|AL138837.12| Human DNA sequence from clone RP1-149P10 on chr... 40 8.0
65emb|BX012398.1|CNS08HQA Single read from an extremity of a full-... 40 8.0
66gb|BC018046.1| Homo sapiens copine VI (neuronal), mRNA (cDNA clo... 40 8.0
67emb|BX927163.31| Zebrafish DNA sequence from clone DKEY-126A1 in... 40 8.0
68emb|CR861125.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0514 (from cl... 40 8.0
69gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 8.0
70gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 8.0
71emb|AL137688.1|HSM802103 Homo sapiens mRNA; cDNA DKFZp434M172 (f... 40 8.0
72emb|AL050397.1|HSM800534 Homo sapiens mRNA; cDNA DKFZp564K1522 (... 40 8.0
73gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, comple... 40 8.0
74ref|NM_182605.1| Homo sapiens hypothetical protein FLJ40448 (FLJ... 40 8.0
75dbj|AK125195.1| Homo sapiens cDNA FLJ43205 fis, clone FEBRA20091... 40 8.0
76dbj|AK097767.1| Homo sapiens cDNA FLJ40448 fis, clone TESTI2040815 40 8.0
77emb|CR598491.1| full-length cDNA clone CS0DC001YG03 of Neuroblas... 40 8.0
78emb|CR598214.1| full-length cDNA clone CS0DF022YI23 of Fetal bra... 40 8.0
79dbj|AK023958.1| Homo sapiens cDNA FLJ13896 fis, clone THYRO10017... 40 8.0
80dbj|AB229336.1| Aspergillus oryzae cDNA, contig sequence: AoEST6215 40 8.0
81gb|BC008362.1| Homo sapiens dihydrouridine synthase 3-like (S. c... 40 8.0
82gb|BC009973.1| Homo sapiens dihydrouridine synthase 3-like (S. c... 40 8.0
83dbj|AK222675.1| Homo sapiens mRNA for copine 6 variant, clone: C... 40 8.0
84gb|AC069303.6| Homo sapiens BAC clone RP11-332N21 from 2, comple... 40 8.0
85gb|AC010980.8| Homo sapiens BAC clone RP11-384O8 from 2, complet... 40 8.0
86gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, comp... 40 8.0
87dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
88gb|AY892955.1| Synthetic construct Homo sapiens clone FLH140037.... 40 8.0
89emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J... 40 8.0
90emb|AL365411.1|IR1967720 Homo sapiens mRNA full length insert cD... 40 8.0
91emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-4... 40 8.0
92gb|BC111769.1| Homo sapiens hypothetical protein FLJ40448, mRNA ... 40 8.0
93emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.0
94emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chr... 40 8.0
95dbj|AB009288.1| Homo sapiens mRNA for N-copine, complete cds 40 8.0 
>gb|AY105627.1| Zea mays PCO089890 mRNA sequence
          Length = 1249

 Score =  131 bits (66), Expect = 3e-27
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                       
Query: 37  gaaagacaaggacaagaagcccggaatcatcgtggtccagggccccaagcctgggaaggc 96
           |||||||||||| |||||||| || ||| | ||| ||||||| || |||||||||||| |
Sbjct: 625 gaaagacaaggagaagaagcctgggatcgtggtgatccagggaccgaagcctgggaagcc 684

                                                                       
Query: 97  caccgacatggcacggatgcgccagatcctgtcgaaactgaagcacacaccgccaccaca 156
            || ||||||||||||||||| |||||  ||  ||| ||||||||||| || ||||||||
Sbjct: 685 aacggacatggcacggatgcggcagatattgctgaagctgaagcacactcccccaccaca 744

                                     
Query: 157 catgaagccacctccaccacctgccg 182
           ||||||||||||||| ||||||||||
Sbjct: 745 catgaagccacctccgccacctgccg 770
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>gb|BT016392.1| Zea mays clone Contig225 mRNA sequence
          Length = 958

 Score =  117 bits (59), Expect = 4e-23
 Identities = 126/147 (85%), Gaps = 1/147 (0%)
 Strand = Plus / Minus

                                                                       
Query: 37  gaaagacaaggacaagaagcccggaatcatcgtggtccagggccccaagcctgggaaggc 96
           |||||||||||| |||||||| || ||| | ||| ||||||| || |||||||||||| |
Sbjct: 718 gaaagacaaggagaagaagcctgggatcgtggtgatccagggaccgaagcctgggaagcc 659

                                                                       
Query: 97  caccgacatggcacggatgcgccagatcctgtcgaaactgaagcacac-accgccaccac 155
            || ||||||||||||||||| |||||  ||  ||| |||||||||||  || |||||||
Sbjct: 658 aacggacatggcacggatgcggcagatattgctgaagctgaagcacactccccccaccac 599

                                      
Query: 156 acatgaagccacctccaccacctgccg 182
           |||||||||||||||| ||||||||||
Sbjct: 598 acatgaagccacctccgccacctgccg 572
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                            
Query: 72       tccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcga 131
                |||||||||| |||||||||||| |||| |||||| |||||||||| |||||  ||  ||
Sbjct: 30693104 tccagggcccaaagcctgggaagcccactgacatgtcacggatgcgtcagatattgctga 30693045

                                                        
Query: 132      aactgaagcacacaccgccaccacacatgaagccacctcc 171
                | ||||||||||| || || ||||| ||||||||||||||
Sbjct: 30693044 agctgaagcacactccccctccacatatgaagccacctcc 30693005



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 259      caaggacgcccctgctaatggcactgtccctgagatggagaaggccgc 306
                |||||||||| |||| ||||||| ||| || |||||||||||||||||
Sbjct: 30692932 caaggacgcctctgccaatggcagtgttccagagatggagaaggccgc 30692885
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>dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1206D04
          Length = 130176

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 72    tccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcga 131
             |||||||||| |||||||||||| |||| |||||| |||||||||| |||||  ||  ||
Sbjct: 95760 tccagggcccaaagcctgggaagcccactgacatgtcacggatgcgtcagatattgctga 95701

                                                     
Query: 132   aactgaagcacacaccgccaccacacatgaagccacctcc 171
             | ||||||||||| || || ||||| ||||||||||||||
Sbjct: 95700 agctgaagcacactccccctccacatatgaagccacctcc 95661



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 259   caaggacgcccctgctaatggcactgtccctgagatggagaaggccgc 306
             |||||||||| |||| ||||||| ||| || |||||||||||||||||
Sbjct: 95588 caaggacgcctctgccaatggcagtgttccagagatggagaaggccgc 95541
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>dbj|AK069288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014P04, full
           insert sequence
          Length = 1305

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 72  tccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcga 131
           |||||||||| |||||||||||| |||| |||||| |||||||||| |||||  ||  ||
Sbjct: 733 tccagggcccaaagcctgggaagcccactgacatgtcacggatgcgtcagatattgctga 792

                                                   
Query: 132 aactgaagcacacaccgccaccacacatgaagccacctcc 171
           | ||||||||||| || || ||||| ||||||||||||||
Sbjct: 793 agctgaagcacactccccctccacatatgaagccacctcc 832



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 259 caaggacgcccctgctaatggcactgtccctgagatggagaaggccgc 306
           |||||||||| |||| ||||||| ||| || |||||||||||||||||
Sbjct: 905 caaggacgcctctgccaatggcagtgttccagagatggagaaggccgc 952
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>gb|BT018962.1| Zea mays clone Contig296.F mRNA sequence
          Length = 912

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 74  cagggccccaagcctgggaaggccaccgacatggcacggatgcgcca 120
           ||||||||||||||||| ||| |||||||| |  | |||||||||||
Sbjct: 285 cagggccccaagcctggcaagcccaccgacctctcccggatgcgcca 331



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 35  aagaaagacaaggacaagaagcc 57
           |||||||||||||||||||||||
Sbjct: 246 aagaaagacaaggacaagaagcc 268
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>gb|AC034200.6|AC034200 Homo sapiens chromosome 5 clone CTB-135C10, complete sequence
          Length = 143084

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 311    gctgccgctgcccccgaggcagc 333
              |||||||||||||||||||||||
Sbjct: 108482 gctgccgctgcccccgaggcagc 108504
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>gb|AC091393.3| Homo sapiens chromosome 5 clone CTC-571O20, complete sequence
          Length = 217781

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 311   gctgccgctgcccccgaggcagc 333
             |||||||||||||||||||||||
Sbjct: 77029 gctgccgctgcccccgaggcagc 77051
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>gb|AY111854.1| Zea mays CL20029_1 mRNA sequence
          Length = 772

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 74  cagggccccaagcctgggaaggccaccgacatggcacggatgcgcca 120
           ||||||||||||||||| ||| |||||||| |  | |||||||||||
Sbjct: 590 cagggccccaagcctggcaagcccaccgacctctcccggatgcgcca 544
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>ref|XM_474364.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                       
Query: 74  cagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcgaaa 133
           |||||||| |||||||| ||| | || ||| |  |||| |||||||||||| |   ||| 
Sbjct: 652 cagggccctaagcctggcaagccgacagacctctcacgaatgcgccagatcttagtgaag 711

                                                     
Query: 134 ctgaagcacacaccgccaccacacatgaagccacctccacca 175
           ||||||||| | || ||||| ||||||| || ||||||||||
Sbjct: 712 ctgaagcacgctcctccaccgcacatgatgcaacctccacca 753
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>ref|XM_477500.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 996

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 302 gccgcacccgctgccgctgccc 323
           ||||||||||||||||||||||
Sbjct: 273 gccgcacccgctgccgctgccc 294
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                         
Query: 74    cagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcgaaa 133
             |||||||| |||||||| ||| | || ||| |  |||| |||||||||||| |   ||| 
Sbjct: 21411 cagggccctaagcctggcaagccgacagacctctcacgaatgcgccagatcttagtgaag 21470

                                                       
Query: 134   ctgaagcacacaccgccaccacacatgaagccacctccacca 175
             ||||||||| | || ||||| ||||||| || ||||||||||
Sbjct: 21471 ctgaagcacgctcctccaccgcacatgatgcaacctccacca 21512
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>emb|CR385386.1| Gallus gallus finished cDNA, clone ChEST605l4
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 305 gcacccgctgccgctgcccccg 326
           ||||||||||||||||||||||
Sbjct: 82  gcacccgctgccgctgcccccg 61
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                            
Query: 74       cagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcgaaa 133
                |||||||| |||||||| ||| | || ||| |  |||| |||||||||||| |   ||| 
Sbjct: 34715849 cagggccctaagcctggcaagccgacagacctctcacgaatgcgccagatcttagtgaag 34715908

                                                          
Query: 134      ctgaagcacacaccgccaccacacatgaagccacctccacca 175
                ||||||||| | || ||||| ||||||| || ||||||||||
Sbjct: 34715909 ctgaagcacgctcctccaccgcacatgatgcaacctccacca 34715950
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 302      gccgcacccgctgccgctgccc 323
                ||||||||||||||||||||||
Sbjct: 11004992 gccgcacccgctgccgctgccc 11004971



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                        
Query: 71       gtccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcct 126
                ||||||||| ||||||| || ||| |||||||| |  | |||||||||||| ||||
Sbjct: 16138901 gtccagggcaccaagcccggcaagcccaccgacctctcccggatgcgccaggtcct 16138846
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>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0091I19
          Length = 126544

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 302   gccgcacccgctgccgctgccc 323
             ||||||||||||||||||||||
Sbjct: 66935 gccgcacccgctgccgctgccc 66914
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>dbj|AK103034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D08, full
           insert sequence
          Length = 1340

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                       
Query: 74  cagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcgaaa 133
           |||||||| |||||||| ||| | || ||| |  |||| |||||||||||| |   ||| 
Sbjct: 748 cagggccctaagcctggcaagccgacagacctctcacgaatgcgccagatcttagtgaag 807

                                                     
Query: 134 ctgaagcacacaccgccaccacacatgaagccacctccacca 175
           ||||||||| | || ||||| ||||||| || ||||||||||
Sbjct: 808 ctgaagcacgctcctccaccgcacatgatgcaacctccacca 849
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                         
Query: 74    cagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcctgtcgaaa 133
             |||||||| |||||||| ||| | || ||| |  |||| |||||||||||| |   ||| 
Sbjct: 58917 cagggccctaagcctggcaagccgacagacctctcacgaatgcgccagatcttagtgaag 58976

                                                       
Query: 134   ctgaagcacacaccgccaccacacatgaagccacctccacca 175
             ||||||||| | || ||||| ||||||| || ||||||||||
Sbjct: 58977 ctgaagcacgctcctccaccgcacatgatgcaacctccacca 59018
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>emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chromosome 2, complete
            sequence
          Length = 142905

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 421  tttgggtgtcagtagagttgttccaggagagatg 454
            ||||||||||||| || |||||||||| ||||||
Sbjct: 3704 tttgggtgtcagtggaattgttccaggggagatg 3737
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>gb|AC154202.2| Mus musculus BAC clone RP24-386E14 from chromosome 14, complete sequence
          Length = 147957

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    acctccaccacctgccgtggc 186
              |||||||||||||||||||||
Sbjct: 129030 acctccaccacctgccgtggc 129010
to top
>gb|BC007897.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase,
            2, mRNA (cDNA clone MGC:14274 IMAGE:4131391), complete
            cds
          Length = 2957

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>gb|AC161509.8| Mus musculus chromosome 7, clone RP23-53O17, complete sequence
          Length = 196638

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   cactgtccctgagatggagaa 300
             |||||||||||||||||||||
Sbjct: 26071 cactgtccctgagatggagaa 26091
to top
>ref|NM_002808.3| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase,
            2 (PSMD2), mRNA
          Length = 2990

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1933 aagaaagacaaggacaagaag 1953
to top
>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete
             sequence
          Length = 173736

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   acctccaccacctgccgtggc 186
             |||||||||||||||||||||
Sbjct: 52090 acctccaccacctgccgtggc 52070
to top
>ref|XM_540136.2| PREDICTED: Canis familiaris similar to anaplastic lymphoma kinase
            Ki-1 (LOC483021), mRNA
          Length = 5718

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  agccacctccaccacctgccg 182
            |||||||||||||||||||||
Sbjct: 3514 agccacctccaccacctgccg 3494
to top
>gb|BC001671.2| Homo sapiens CGI-130 protein, mRNA (cDNA clone IMAGE:2820689),
          complete cds
          Length = 929

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 23 aagaggacggggaagaaagacaagg 47
          ||||||| |||||||||||||||||
Sbjct: 42 aagaggagggggaagaaagacaagg 66
to top
>emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on chromosome 1 Contains a
             processed pseudogene similar to ribosomal protein L31
             (RPL31), complete sequence
          Length = 200461

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   cagctcctgcaccaccagctg 353
             |||||||||||||||||||||
Sbjct: 39048 cagctcctgcaccaccagctg 39028
to top
>gb|BT009736.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase,
            2 mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>gb|BT009735.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S
            subunit, non-ATPase, 2 mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O5 on chromosome 6q22.1-23.3
              Contains the 3' end of the TPD52L1 gene encoding two
              variants of tumor protein D52-like 1 protein, the gene for
              CGI-130 protein and a CpG island, complete sequence
          Length = 156054

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 23     aagaggacggggaagaaagacaagg 47
              ||||||| |||||||||||||||||
Sbjct: 123728 aagaggagggggaagaaagacaagg 123704
to top
>emb|CR620212.1| full-length cDNA clone CS0DK010YG02 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 2852

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1895 aagaaagacaaggacaagaag 1915
to top
>dbj|AK095245.1| Homo sapiens cDNA FLJ37926 fis, clone CTONG2000977, highly similar to
            26S PROTEASOME REGULATORY SUBUNIT S2
          Length = 3447

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 2460 aagaaagacaaggacaagaag 2480
to top
>emb|CR600526.1| full-length cDNA clone CS0DG006YE16 of B cells (Ramos cell line) of
           Homo sapiens (human)
          Length = 1012

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 35  aagaaagacaaggacaagaag 55
           |||||||||||||||||||||
Sbjct: 81  aagaaagacaaggacaagaag 101
to top
>gb|AC078797.20| Homo sapiens 3 BAC RP11-125E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166704

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aagaaagacaaggacaagaag 55
             |||||||||||||||||||||
Sbjct: 47810 aagaaagacaaggacaagaag 47830
to top
>gb|AY892426.1| Synthetic construct Homo sapiens clone FLH022847.01L proteasome 26S
            subunit 2 (PSMD2) mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>gb|AY892425.1| Synthetic construct Homo sapiens clone FLH022846.01L proteasome 26S
            subunit 2 (PSMD2) mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>gb|AY889948.1| Synthetic construct Homo sapiens clone FLH022851.01X proteasome 26S
            subunit 2 (PSMD2) mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>gb|AY889947.1| Synthetic construct Homo sapiens clone FLH022850.01X proteasome 26S
            subunit 2 (PSMD2) mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1900 aagaaagacaaggacaagaag 1920
to top
>ref|XM_309113.2| Anopheles gambiae str. PEST ENSANGP00000020537
           (ENSANGG00000018048), partial mRNA
          Length = 4218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 329 gcagcagctcctgcaccaccagctg 353
           |||||||| ||||||||||||||||
Sbjct: 93  gcagcagcacctgcaccaccagctg 117
to top
>ref|XM_308229.2| Anopheles gambiae str. PEST ENSANGP00000020719 (ENSANGG00000018230),
            partial mRNA
          Length = 4215

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  gccacctccaccacctgccgt 183
            |||||||||||||||||||||
Sbjct: 1569 gccacctccaccacctgccgt 1589
to top
>gb|BC002368.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase,
            2, mRNA (cDNA clone MGC:8500 IMAGE:2822191), complete cds
          Length = 2917

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1901 aagaaagacaaggacaagaag 1921
to top
>gb|BC002997.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase,
            2, mRNA (cDNA clone MGC:3871 IMAGE:2905429), complete cds
          Length = 2928

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1922 aagaaagacaaggacaagaag 1942
to top
>gb|AC102117.13| Mus musculus chromosome 7, clone RP23-154P9, complete sequence
          Length = 196717

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 280    cactgtccctgagatggagaa 300
              |||||||||||||||||||||
Sbjct: 126967 cactgtccctgagatggagaa 126987
to top
>dbj|AB209843.1| Homo sapiens mRNA for proteasome 26S non-ATPase subunit 2 variant
            protein
          Length = 2900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1915 aagaaagacaaggacaagaag 1935
to top
>gb|U12596.1|HSU12596 Human tumor necrosis factor type 1 receptor associated protein
            (TRAP2) mRNA, complete cds
          Length = 2828

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1838 aagaaagacaaggacaagaag 1858
to top
>emb|X86446.1|HSRNA5511 H.sapiens mRNA for 55.11 binding protein
          Length = 2863

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1873 aagaaagacaaggacaagaag 1893
to top
>dbj|D78151.1|HUM26SPSP Human mRNA for 26S proteasome subunit p97, complete cds
          Length = 2922

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aagaaagacaaggacaagaag 55
            |||||||||||||||||||||
Sbjct: 1933 aagaaagacaaggacaagaag 1953
to top
>gb|AY556462.1| Saguinus oedipus glandular kallikrein 2 pseudogene, complete sequence
          Length = 13375

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    agaaagacaaggacaagaag 55
             ||||||||||||||||||||
Sbjct: 11567 agaaagacaaggacaagaag 11548
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aggctgcagcgacacctgct 256
             ||||||||||||||||||||
Sbjct: 41007 aggctgcagcgacacctgct 41026
to top
>ref|XM_512304.1| PREDICTED: Pan troglodytes similar to hypothetical protein from
           EUROIMAGE 1967720 (LOC455626), mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 794 cacccgctgccgctgtccccgagg 817
to top
>ref|XM_477978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 71  gtccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcct 126
           ||||||||| ||||||| || ||| |||||||| |  | |||||||||||| ||||
Sbjct: 796 gtccagggcaccaagcccggcaagcccaccgacctctcccggatgcgccaggtcct 851
to top
>gb|BC081047.1| Xenopus laevis MGC81799 protein, mRNA (cDNA clone MGC:81799
            IMAGE:7007776), complete cds
          Length = 2085

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aagaaagacaaggacaagaa 54
            ||||||||||||||||||||
Sbjct: 1594 aagaaagacaaggacaagaa 1613
to top
>ref|XM_420591.1| PREDICTED: Gallus gallus similar to septin 11 (LOC422635), mRNA
          Length = 2500

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aagaaagacaaggacaagaa 54
            ||||||||||||||||||||
Sbjct: 1858 aagaaagacaaggacaagaa 1877
to top
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    cacccgctgccgctgccccc 325
              ||||||||||||||||||||
Sbjct: 106049 cacccgctgccgctgccccc 106030
to top
>ref|NM_020175.1| Homo sapiens dihydrouridine synthase 3-like (S. cerevisiae)
           (DUS3L), mRNA
          Length = 2078

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 767 cacccgctgccgctgtccccgagg 790
to top
>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence
          Length = 166883

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    ggctgcagcgacacctgctg 257
              ||||||||||||||||||||
Sbjct: 129815 ggctgcagcgacacctgctg 129796
to top
>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    ggctgcagcgacacctgctg 257
              ||||||||||||||||||||
Sbjct: 225217 ggctgcagcgacacctgctg 225236
to top
>ref|XM_804176.1| Trypanosoma cruzi strain CL Brener heat shock protein-like protein
           (Tc00.1047053508443.20) partial mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 326 gaggcagcagctcctgcaccacca 349
           |||||||||||||| |||||||||
Sbjct: 661 gaggcagcagctccagcaccacca 638
to top
>ref|XM_812539.1| Trypanosoma cruzi strain CL Brener heat shock protein-like protein
           (Tc00.1047053509157.80) partial mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 326 gaggcagcagctcctgcaccacca 349
           |||||||||||||| |||||||||
Sbjct: 661 gaggcagcagctccagcaccacca 638
to top
>ref|NM_006032.2| Homo sapiens copine VI (neuronal) (CPNE6), mRNA
          Length = 2018

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1695 ctccaccacctgccgtggca 1676
to top
>emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chromosome X Contains a
             pseudogene similar to part of SLC9A2 (solute carrier
             family 9 (sodium/hydrogen exchanger), isoform 2), complete
             sequence
          Length = 190604

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   tattattaatttgagtttgttatt 575
             |||||||||||||||||| |||||
Sbjct: 37354 tattattaatttgagttttttatt 37377
to top
>ref|XM_501302.1| Yarrowia lipolytica CLIB122, YALI0C00825g predicted mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 cctgcaccaccagctgagcc 357
           ||||||||||||||||||||
Sbjct: 312 cctgcaccaccagctgagcc 331
to top
>emb|AL365366.20| Human DNA sequence from clone RP11-553N16 on chromosome 1 Contains the
             3' end of the gene for a novel protein (FLJ16613), a
             ribosomal protein L6 (RPL6) pseudogene, the EXO1 gene for
             exonuclease 1, the 5' end of a ribosomal protein L23a
             (RPL23a) pseudogene and a CpG island, complete sequence
          Length = 143967

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 277   tggcactgtccctgagatggagaa 300
             ||||||||||| ||||||||||||
Sbjct: 15676 tggcactgtccttgagatggagaa 15699
to top
>emb|AL138837.12| Human DNA sequence from clone RP1-149P10 on chromosome 1 Contains the
             5' end of a variant of the PHC2 gene for polyhomeotic-like
             2 (Drosophila) and the 5' end of the ZNF31 gene for zinc
             finger protein 31 (KOX 29), complete sequence
          Length = 98873

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   aggcagcagctcctgcacca 346
             ||||||||||||||||||||
Sbjct: 79746 aggcagcagctcctgcacca 79727
to top
>emb|BX012398.1|CNS08HQA Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA19CG08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 976

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 gcccctgctaatggcactgt 285
           ||||||||||||||||||||
Sbjct: 450 gcccctgctaatggcactgt 431
to top
>gb|BC018046.1| Homo sapiens copine VI (neuronal), mRNA (cDNA clone MGC:26354
            IMAGE:4799650), complete cds
          Length = 2030

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1701 ctccaccacctgccgtggca 1682
to top
>emb|BX927163.31| Zebrafish DNA sequence from clone DKEY-126A1 in linkage group 22,
             complete sequence
          Length = 157294

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   agagatggatggggaaggag 467
             ||||||||||||||||||||
Sbjct: 33170 agagatggatggggaaggag 33189
to top
>emb|CR861125.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0514 (from clone DKFZp459O0514)
          Length = 2043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1709 ctccaccacctgccgtggca 1690
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    cacccgctgccgctgccccc 325
              ||||||||||||||||||||
Sbjct: 247499 cacccgctgccgctgccccc 247518
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     ccgctgccgctgcccccgag 328
               ||||||||||||||||||||
Sbjct: 2643433 ccgctgccgctgcccccgag 2643414



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    cacccgctgccgctgccccc 325
              ||||||||||||||||||||
Sbjct: 484511 cacccgctgccgctgccccc 484530
to top
>emb|AL137688.1|HSM802103 Homo sapiens mRNA; cDNA DKFZp434M172 (from clone DKFZp434M172)
          Length = 4546

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 4223 ctccaccacctgccgtggca 4204
to top
>emb|AL050397.1|HSM800534 Homo sapiens mRNA; cDNA DKFZp564K1522 (from clone DKFZp564K1522)
          Length = 2213

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1760 ctccaccacctgccgtggca 1741
to top
>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 306    cacccgctgccgctgcccccgagg 329
              ||||||||||||||| ||||||||
Sbjct: 162765 cacccgctgccgctgtccccgagg 162742
to top
>ref|NM_182605.1| Homo sapiens hypothetical protein FLJ40448 (FLJ40448), mRNA
          Length = 2140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 328 ggcagcagctcctgcaccaccagc 351
           ||||||| ||||||||||||||||
Sbjct: 632 ggcagcaactcctgcaccaccagc 655
to top
>dbj|AK125195.1| Homo sapiens cDNA FLJ43205 fis, clone FEBRA2009185, highly  similar
            to Homo sapiens mRNA for N-copine
          Length = 2771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 2457 ctccaccacctgccgtggca 2438
to top
>dbj|AK097767.1| Homo sapiens cDNA FLJ40448 fis, clone TESTI2040815
          Length = 2140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 328 ggcagcagctcctgcaccaccagc 351
           ||||||| ||||||||||||||||
Sbjct: 632 ggcagcaactcctgcaccaccagc 655
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>emb|CR598491.1| full-length cDNA clone CS0DC001YG03 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1818

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 726 cacccgctgccgctgtccccgagg 749
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>emb|CR598214.1| full-length cDNA clone CS0DF022YI23 of Fetal brain of Homo sapiens
            (human)
          Length = 1968

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1670 ctccaccacctgccgtggca 1651
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>dbj|AK023958.1| Homo sapiens cDNA FLJ13896 fis, clone THYRO1001703, weakly similar
           to NIFR3-LIKE PROTEIN
          Length = 2034

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 741 cacccgctgccgctgtccccgagg 764
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>dbj|AB229336.1| Aspergillus oryzae cDNA, contig sequence: AoEST6215
          Length = 554

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  attcggcacgaggacacatc 20
          ||||||||||||||||||||
Sbjct: 3  attcggcacgaggacacatc 22
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>gb|BC008362.1| Homo sapiens dihydrouridine synthase 3-like (S. cerevisiae), mRNA
           (cDNA clone IMAGE:3611486), partial cds
          Length = 1932

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 610 cacccgctgccgctgtccccgagg 633
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>gb|BC009973.1| Homo sapiens dihydrouridine synthase 3-like (S. cerevisiae), mRNA
           (cDNA clone MGC:14981 IMAGE:4303655), complete cds
          Length = 2078

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 767 cacccgctgccgctgtccccgagg 790
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>dbj|AK222675.1| Homo sapiens mRNA for copine 6 variant, clone: CBR03180
          Length = 1744

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1655 ctccaccacctgccgtggca 1636
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>gb|AC069303.6| Homo sapiens BAC clone RP11-332N21 from 2, complete sequence
          Length = 162968

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    cgtggtccagggccccaagc 86
             ||||||||||||||||||||
Sbjct: 94072 cgtggtccagggccccaagc 94053
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>gb|AC010980.8| Homo sapiens BAC clone RP11-384O8 from 2, complete sequence
          Length = 171374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   agagttgttccaggagagat 453
             ||||||||||||||||||||
Sbjct: 25903 agagttgttccaggagagat 25922
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>gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, complete sequence
          Length = 127698

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 328   ggcagcagctcctgcaccaccagc 351
             ||||||| ||||||||||||||||
Sbjct: 35281 ggcagcaactcctgcaccaccagc 35258
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                      
Query: 71     gtccagggccccaagcctgggaaggccaccgacatggcacggatgcgccagatcct 126
              ||||||||| ||||||| || ||| |||||||| |  | |||||||||||| ||||
Sbjct: 109234 gtccagggcaccaagcccggcaagcccaccgacctctcccggatgcgccaggtcct 109179
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>gb|AY892955.1| Synthetic construct Homo sapiens clone FLH140037.01L copine VI
            (CPNE6) mRNA, partial cds
          Length = 1674

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1596 ctccaccacctgccgtggca 1577
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>emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J21 on chromosome 20, complete
              sequence
          Length = 108458

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    tgcctgaacgaaggtggctt 386
              ||||||||||||||||||||
Sbjct: 102413 tgcctgaacgaaggtggctt 102432
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>emb|AL365411.1|IR1967720 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1967720
          Length = 2205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cacccgctgccgctgcccccgagg 329
           ||||||||||||||| ||||||||
Sbjct: 670 cacccgctgccgctgtccccgagg 693
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>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194815

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    ctccaccacctgccgtggca 187
              ||||||||||||||||||||
Sbjct: 132380 ctccaccacctgccgtggca 132399
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>gb|BC111769.1| Homo sapiens hypothetical protein FLJ40448, mRNA (cDNA clone
           MGC:133175 IMAGE:40025355), complete cds
          Length = 1903

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 328 ggcagcagctcctgcaccaccagc 351
           ||||||| ||||||||||||||||
Sbjct: 578 ggcagcaactcctgcaccaccagc 601
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    cctgcaccaccagctgagcc 357
              ||||||||||||||||||||
Sbjct: 110174 cctgcaccaccagctgagcc 110193
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>emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chromosome X, complete
             sequence
          Length = 196655

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 559   aatttgagtttgttattatg 578
             ||||||||||||||||||||
Sbjct: 76905 aatttgagtttgttattatg 76886
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>dbj|AB009288.1| Homo sapiens mRNA for N-copine, complete cds
          Length = 1925

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  ctccaccacctgccgtggca 187
            ||||||||||||||||||||
Sbjct: 1695 ctccaccacctgccgtggca 1676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,245,336
Number of Sequences: 3902068
Number of extensions: 5245336
Number of successful extensions: 120655
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120127
Number of HSP's gapped (non-prelim): 527
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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