ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 123861 cgcgtcagcaactactgcaagttcgacagtcagctgctgacgctcttcacctcatcgctc 123920 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| || || || || |||||||||||||||||||| |||| Sbjct: 123921 tacatctccggcctgctcaccgccgtgctcctcgcgtcgtgggtcacggccagccgcggc 123980 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||||||||||||||||| Sbjct: 123981 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgcggcggtcagcggc 124040 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggcgctgctcggtgtcgg 512 | || || ||||||| |||||| |||||||| |||||||| ||||| ||||| Sbjct: 124041 gctgccgtcaacgtgtccatggccatcctcggcagggcgctcctcggcgtcgg 124093 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 119 gcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtca 178 |||| |||||||| ||||| || ||||| |||||| ||||||| | |||||||||| || Sbjct: 123676 gcgggagggtcacggcgttcgtggcgctgtcctgcgccacggcggcgatgggcggcgcca 123735 Query: 179 tctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcctcgggg 238 ||||||||||||||||| | |||| || |||||||||||||||||||||||||| ||| Sbjct: 123736 tctacggctacgacatcagcatcgccggcggcgtgtcgtccatggagccgttcctgaggg 123795 Query: 239 aattcttccc 248 | |||||||| Sbjct: 123796 acttcttccc 123805 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 124241 gaaatggcaccggcgcgataccggggagcattcagcaacggcatccagttcagcctgtgt 124300 Query: 613 ctcggagatctcgcc 627 ||||||| ||||||| Sbjct: 124301 ctcggagctctcgcc 124315
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 21771808 cgcgtcagcaactactgcaagttcgacagtcagctgctgacgctcttcacctcatcgctc 21771867 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| || || || || |||||||||||||||||||| |||| Sbjct: 21771868 tacatctccggcctgctcaccgccgtgctcctcgcgtcgtgggtcacggccagccgcggc 21771927 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||||||||||||||||| Sbjct: 21771928 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgcggcggtcagcggc 21771987 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggcgctgctcggtgtcgg 512 | || || ||||||| |||||| |||||||| |||||||| ||||| ||||| Sbjct: 21771988 gctgccgtcaacgtgtccatggccatcctcggcagggcgctcctcggcgtcgg 21772040 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 119 gcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtca 178 |||| |||||||| ||||| || ||||| |||||| ||||||| | |||||||||| || Sbjct: 21771623 gcgggagggtcacggcgttcgtggcgctgtcctgcgccacggcggcgatgggcggcgcca 21771682 Query: 179 tctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcctcgggg 238 ||||||||||||||||| | |||| || |||||||||||||||||||||||||| ||| Sbjct: 21771683 tctacggctacgacatcagcatcgccggcggcgtgtcgtccatggagccgttcctgaggg 21771742 Query: 239 aattcttccc 248 | |||||||| Sbjct: 21771743 acttcttccc 21771752 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 21772188 gaaatggcaccggcgcgataccggggagcattcagcaacggcatccagttcagcctgtgt 21772247 Query: 613 ctcggagatctcgcc 627 ||||||| ||||||| Sbjct: 21772248 ctcggagctctcgcc 21772262 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cgccggcgcggcggtcagcggcgg 461 |||||||||||||| ||||||||| Sbjct: 19335643 cgccggcgcggcgggcagcggcgg 19335666
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 22082007 cgcgtcagcaactactgcaagttcgacagtcagctgctgacgctcttcacctcatcgctc 22082066 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| || || || || |||||||||||||||||||| |||| Sbjct: 22082067 tacatctccggcctgctcaccgccgtgctcctcgcgtcgtgggtcacggccagccgcggc 22082126 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||||||||||||||||| Sbjct: 22082127 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgcggcggtcagcggc 22082186 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggcgctgctcggtgtcgg 512 | || || ||||||| |||||| |||||||| |||||||| ||||| ||||| Sbjct: 22082187 gctgccgtcaacgtgtccatggccatcctcggcagggcgctcctcggcgtcgg 22082239 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 119 gcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtca 178 |||| |||||||| ||||| || ||||| |||||| ||||||| | |||||||||| || Sbjct: 22081822 gcgggagggtcacggcgttcgtggcgctgtcctgcgccacggcggcgatgggcggcgcca 22081881 Query: 179 tctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcctcgggg 238 ||||||||||||||||| | |||| || |||||||||||||||||||||||||| ||| Sbjct: 22081882 tctacggctacgacatcagcatcgccggcggcgtgtcgtccatggagccgttcctgaggg 22081941 Query: 239 aattcttccc 248 | |||||||| Sbjct: 22081942 acttcttccc 22081951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 22082387 gaaatggcaccggcgcgataccggggagcattcagcaacggcatccagttcagcctgtgt 22082446 Query: 613 ctcggagatctcgcc 627 ||||||| ||||||| Sbjct: 22082447 ctcggagctctcgcc 22082461 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cgccggcgcggcggtcagcggcgg 461 |||||||||||||| ||||||||| Sbjct: 19495192 cgccggcgcggcgggcagcggcgg 19495215
>ref|XM_493721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 143 bits (72), Expect = 8e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 124 agggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtcatctac 183 |||||||||||||| || | ||| || ||| |||| || ||||||||||||||||| | Sbjct: 67 agggtcaccgcgttcgtcgtgctgtcgtgcgtcaccgccggcatgggcggcgtcatcttc 126 Query: 184 ggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcctcggggaattc 243 ||||||||||||||| |||| || ||||||||||| |||||||||||| | || | ||| Sbjct: 127 ggctacgacatcgggatcgcaggtggcgtgtcgtcgatggagccgttcttgaggaagttc 186 Query: 244 ttcccagacgtgtaccgcaggatgaagggcgactcacgcgtaagcaactactgcaagttc 303 ||||| || ||| |||| ||||| |||||||| || || |||||||||||||||||| Sbjct: 187 ttcccggaggtgcaccggcggatggagggcgacgtgcgggtcagcaactactgcaagttc 246 Query: 304 gacagccagctccttacgctcttcacctcctccctctacatctcagggctgctcac 359 ||||||||||| || ||| ||||||||||| |||||| || | ||||| ||||| Sbjct: 247 gacagccagctgctcacggcgttcacctcctcgctctacgtcgccgggctcctcac 302 Score = 44.1 bits (22), Expect = 0.55 Identities = 100/126 (79%) Strand = Plus / Plus Query: 435 cctcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctcggtag 494 ||||||||||||||| ||| |||||| | | ||| || | ||||||| |||||||| | Sbjct: 375 cctcgccggcgcggccgtcggcggcgcgtcggtggacatctacatggtcatcctcggccg 434 Query: 495 ggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcgga 554 | || ||||| ||||| || || || ||||||||||| ||||| |||||| | ||||| Sbjct: 435 cgtcctcctcggcgtcggcctcggcttcgccaaccaggccgtgccgctctacctgtcgga 494 Query: 555 aatggc 560 ||||| Sbjct: 495 gatggc 500
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 107 bits (54), Expect = 4e-20 Identities = 178/218 (81%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| |||||||||||||||||||||||| |||| || |||||||||||||| || ||| Sbjct: 6481 cgcgtcagcaactactgcaagttcgacagctagctgctgacgctcttcacctcgtcgctc 6422 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| | | || || |||||||||||||||| ||| |||| Sbjct: 6421 tacatctccggcctgctcacctccgcgctcct-ccgtcgtgggtcacggctagccgcggc 6363 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||| ||||| ||||||| Sbjct: 6362 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgtggcggccagcggc 6303 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggc 497 ||||| ||||||| ||| || ||||| |||||||| Sbjct: 6302 accgctgtcaacgtgtccattgccatccttggtagggc 6265 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 166 atgggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggag 225 |||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 6607 atgggcggcgccatctacggctacgacatcagcaccgcgggcggcgtgtcgtccatggag 6548 Query: 226 ccgttcct 233 ||||||| Sbjct: 6547 tcgttcct 6540 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 6102 gaaatggcaccggcgcgatactggggagcattcagcaacggcatccagttcagcctttgt 6043 Query: 613 ctcggagatctcgcc 627 |||||| ||||||| Sbjct: 6042 ttcggagctctcgcc 6028
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 107 bits (54), Expect = 4e-20 Identities = 178/218 (81%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| |||||||||||||||||||||||| |||| || |||||||||||||| || ||| Sbjct: 94696 cgcgtcagcaactactgcaagttcgacagctagctgctgacgctcttcacctcgtcgctc 94637 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| | | || || |||||||||||||||| ||| |||| Sbjct: 94636 tacatctccggcctgctcacctccgcgctcct-ccgtcgtgggtcacggctagccgcggc 94578 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||| ||||| ||||||| Sbjct: 94577 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgtggcggccagcggc 94518 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggc 497 ||||| ||||||| ||| || ||||| |||||||| Sbjct: 94517 accgctgtcaacgtgtccattgccatccttggtagggc 94480 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 166 atgggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggag 225 |||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 94822 atgggcggcgccatctacggctacgacatcagcaccgcgggcggcgtgtcgtccatggag 94763 Query: 226 ccgttcct 233 ||||||| Sbjct: 94762 tcgttcct 94755 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 94317 gaaatggcaccggcgcgatactggggagcattcagcaacggcatccagttcagcctttgt 94258 Query: 613 ctcggagatctcgcc 627 |||||| ||||||| Sbjct: 94257 ttcggagctctcgcc 94243
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 107 bits (54), Expect = 4e-20 Identities = 178/218 (81%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| |||||||||||||||||||||||| |||| || |||||||||||||| || ||| Sbjct: 4120002 cgcgtcagcaactactgcaagttcgacagctagctgctgacgctcttcacctcgtcgctc 4119943 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||||| || |||||||| | | || || |||||||||||||||| ||| |||| Sbjct: 4119942 tacatctccggcctgctcacctccgcgctcct-ccgtcgtgggtcacggctagccgcggc 4119884 Query: 400 cgccggccctccatgattgtcggtggcacggcatacctcgccggcgcggcggtcagcggc 459 ||||| | |||||||| |||| ||| || ||| ||||||||| ||||| ||||||| Sbjct: 4119883 cgccgcgcgtccatgatcctcggcggcttcgcctacatcgccggcgtggcggccagcggc 4119824 Query: 460 ggggctgtgaacgtgtacatggcgatcctcggtagggc 497 ||||| ||||||| ||| || ||||| |||||||| Sbjct: 4119823 accgctgtcaacgtgtccattgccatccttggtagggc 4119786 Score = 89.7 bits (45), Expect = 1e-14 Identities = 118/141 (83%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| ||||||||||||||||| ||||||||||| | |||||||||||||| || ||| Sbjct: 19137586 cgcgtcagcaactactgcaagtttgacagccagctgttgacgctcttcacctcgtcgctc 19137645 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||| | || |||||||| || || || || |||||| ||||||||||||| |||| Sbjct: 19137646 tacatccccggcctgctcaccgccgtgctcctcgcgtcgt-ggtcacggccagccgcggc 19137704 Query: 400 cgccggccctccatgattgtc 420 |||| | |||||||||||| Sbjct: 19137705 cgccacacgtccatgattgtc 19137725 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 118 ggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtc 177 ||||| |||||||| ||||| || || || |||||| ||||||| | |||||||| | | Sbjct: 19137429 ggcgggagggtcacggcgttcgtggcactgtcctgcgccacggcggcgatgggcggtgcc 19137488 Query: 178 atctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcct 233 ||||||||||| |||||| | |||||| |||||||| ||||||||||||||||| Sbjct: 19137489 atctacggctatgacatcagcaccgcgggcggcgtgtcatccatggagccgttcct 19137544 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 166 atgggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggag 225 |||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 4120128 atgggcggcgccatctacggctacgacatcagcaccgcgggcggcgtgtcgtccatggag 4120069 Query: 226 ccgttcct 233 ||||||| Sbjct: 4120068 tcgttcct 4120061 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 568 cgatacaggggagccttcagcaatggcttccaattcagcctatgtctcggagatctcgcc 627 |||||| ||||||| |||||||||||| |||| |||||||| |||||||||| ||||||| Sbjct: 19138941 cgataccggggagcattcagcaatggcatccagttcagcctgtgtctcggagctctcgcc 19139000 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 553 gaaatggcacccacacgatacaggggagccttcagcaatggcttccaattcagcctatgt 612 ||||||||||| | |||||| ||||||| |||||||| ||| |||| |||||||| ||| Sbjct: 4119623 gaaatggcaccggcgcgatactggggagcattcagcaacggcatccagttcagcctttgt 4119564 Query: 613 ctcggagatctcgcc 627 |||||| ||||||| Sbjct: 4119563 ttcggagctctcgcc 4119549 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 437 tcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctc 489 ||||||| |||||||||||||||| |||| ||||||| |||||| |||||| Sbjct: 19138703 tcgccggtgcggcggtcagcggcgcctctgtcaacgtgtccatggccatcctc 19138755
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 89.7 bits (45), Expect = 1e-14 Identities = 118/141 (83%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 280 cgcgtaagcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctc 339 ||||| ||||||||||||||||| ||||||||||| | |||||||||||||| || ||| Sbjct: 59484 cgcgtcagcaactactgcaagtttgacagccagctgttgacgctcttcacctcgtcgctc 59543 Query: 340 tacatctcagggctgctcacggcggtcctactatcgtcgtgggtcacggccagctgcggg 399 |||||| | || |||||||| || || || || |||||| ||||||||||||| |||| Sbjct: 59544 tacatccccggcctgctcaccgccgtgctcctcgcgtcgt-ggtcacggccagccgcggc 59602 Query: 400 cgccggccctccatgattgtc 420 |||| | |||||||||||| Sbjct: 59603 cgccacacgtccatgattgtc 59623 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 118 ggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtc 177 ||||| |||||||| ||||| || || || |||||| ||||||| | |||||||| | | Sbjct: 59327 ggcgggagggtcacggcgttcgtggcactgtcctgcgccacggcggcgatgggcggtgcc 59386 Query: 178 atctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttcct 233 ||||||||||| |||||| | |||||| |||||||| ||||||||||||||||| Sbjct: 59387 atctacggctatgacatcagcaccgcgggcggcgtgtcatccatggagccgttcct 59442 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 568 cgatacaggggagccttcagcaatggcttccaattcagcctatgtctcggagatctcgcc 627 |||||| ||||||| |||||||||||| |||| |||||||| |||||||||| ||||||| Sbjct: 60839 cgataccggggagcattcagcaatggcatccagttcagcctgtgtctcggagctctcgcc 60898 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 437 tcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctc 489 ||||||| |||||||||||||||| |||| ||||||| |||||| |||||| Sbjct: 60601 tcgccggtgcggcggtcagcggcgcctctgtcaacgtgtccatggccatcctc 60653
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Minus Query: 208 ggcgtgtcgtccatggagccgttcctcggggaattcttcccagacgtgtaccgcaggatg 267 ||||||||||| |||||||||||| | || | |||||||| || ||| |||| ||||| Sbjct: 2155481 ggcgtgtcgtcgatggagccgttcttgaggaagttcttcccggaggtgcaccggcggatg 2155422 Query: 268 aagggcgactcacgcgtaagcaactactgcaagttcgacagccagctccttacgctcttc 327 |||||||| || || ||||||||||||||||||||||||||||| || ||| ||| Sbjct: 2155421 gagggcgacgtgcgggtcagcaactactgcaagttcgacagccagctgctcacggcgttc 2155362 Query: 328 acctcctccctctacatctcagggctgctcac 359 |||||||| |||||| || | ||||| ||||| Sbjct: 2155361 acctcctcgctctacgtcgccgggctcctcac 2155330 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 124 agggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtcatctac 183 |||||||||||||| || | ||| || ||| |||| || ||||||||||||||||| | Sbjct: 2155642 agggtcaccgcgttcgtcgtgctgtcgtgcgtcaccgccggcatgggcggcgtcatcttc 2155583 Query: 184 ggctacgacatcggggtcgc 203 ||||||||||||||| |||| Sbjct: 2155582 ggctacgacatcgggatcgc 2155563 Score = 44.1 bits (22), Expect = 0.55 Identities = 100/126 (79%) Strand = Plus / Minus Query: 435 cctcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctcggtag 494 ||||||||||||||| ||| |||||| | | ||| || | ||||||| |||||||| | Sbjct: 2155257 cctcgccggcgcggccgtcggcggcgcgtcggtggacatctacatggtcatcctcggccg 2155198 Query: 495 ggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcgga 554 | || ||||| ||||| || || || ||||||||||| ||||| |||||| | ||||| Sbjct: 2155197 cgtcctcctcggcgtcggcctcggcttcgccaaccaggccgtgccgctctacctgtcgga 2155138 Query: 555 aatggc 560 ||||| Sbjct: 2155137 gatggc 2155132
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Minus Query: 208 ggcgtgtcgtccatggagccgttcctcggggaattcttcccagacgtgtaccgcaggatg 267 ||||||||||| |||||||||||| | || | |||||||| || ||| |||| ||||| Sbjct: 14938 ggcgtgtcgtcgatggagccgttcttgaggaagttcttcccggaggtgcaccggcggatg 14879 Query: 268 aagggcgactcacgcgtaagcaactactgcaagttcgacagccagctccttacgctcttc 327 |||||||| || || ||||||||||||||||||||||||||||| || ||| ||| Sbjct: 14878 gagggcgacgtgcgggtcagcaactactgcaagttcgacagccagctgctcacggcgttc 14819 Query: 328 acctcctccctctacatctcagggctgctcac 359 |||||||| |||||| || | ||||| ||||| Sbjct: 14818 acctcctcgctctacgtcgccgggctcctcac 14787 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 124 agggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggcgtcatctac 183 |||||||||||||| || | ||| || ||| |||| || ||||||||||||||||| | Sbjct: 15099 agggtcaccgcgttcgtcgtgctgtcgtgcgtcaccgccggcatgggcggcgtcatcttc 15040 Query: 184 ggctacgacatcggggtcgc 203 ||||||||||||||| |||| Sbjct: 15039 ggctacgacatcgggatcgc 15020 Score = 44.1 bits (22), Expect = 0.55 Identities = 100/126 (79%) Strand = Plus / Minus Query: 435 cctcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctcggtag 494 ||||||||||||||| ||| |||||| | | ||| || | ||||||| |||||||| | Sbjct: 14714 cctcgccggcgcggccgtcggcggcgcgtcggtggacatctacatggtcatcctcggccg 14655 Query: 495 ggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcgga 554 | || ||||| ||||| || || || ||||||||||| ||||| |||||| | ||||| Sbjct: 14654 cgtcctcctcggcgtcggcctcggcttcgccaaccaggccgtgccgctctacctgtcgga 14595 Query: 555 aatggc 560 ||||| Sbjct: 14594 gatggc 14589
>ref|XM_475195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 483 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 568 cgatacaggggagccttcagcaatggcttccaattcagcctatgtctcggagatctcgcc 627 |||||| ||||||| |||||||||||| |||| |||||||| |||||||||| ||||||| Sbjct: 157 cgataccggggagcattcagcaatggcatccagttcagcctgtgtctcggagctctcgcc 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 437 tcgccggcgcggcggtcagcggcggggctgtgaacgtgtacatggcgatcctc 489 ||||||| |||||||||||||||| |||| ||||||| |||||| |||||| Sbjct: 26 tcgccggtgcggcggtcagcggcgcctctgtcaacgtgtccatggccatcctc 78
>ref|XM_480356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 293 tactgcaagttcgacagccagctgctgacgctcttcacctc 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 170 ggcggcctcatcttcggctacgacatcgg 198
>ref|XM_507147.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1120_C08.22 mRNA Length = 2059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 293 tactgcaagttcgacagccagctgctgacgctcttcacctc 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 170 ggcggcctcatcttcggctacgacatcgg 198
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 4575379 tactgcaagttcgacagccagctgctgacgctcttcacctc 4575419 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 4575256 ggcggcctcatcttcggctacgacatcgg 4575284
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 99227 tactgcaagttcgacagccagctgctgacgctcttcacctc 99267 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 99104 ggcggcctcatcttcggctacgacatcgg 99132
>dbj|AK072269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O22, full insert sequence Length = 1743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 293 tactgcaagttcgacagccagctgctgacgctcttcacctc 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 170 ggcggcctcatcttcggctacgacatcgg 198
>dbj|AK070877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065C06, full insert sequence Length = 2059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctc 332 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 293 tactgcaagttcgacagccagctgctgacgctcttcacctc 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 170 ggcggcctcatcttcggctacgacatcgg 198
>ref|XM_450383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1794 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 105 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 164 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 165 gtcatcttcggctatgacatcgg 187 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 268 gcgtcagcaactactgcaagttcgacagcgagct 301 Score = 40.1 bits (20), Expect = 8.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 493 agggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcg 552 |||| ||||||||| |||||||| || || | ||| ||||| ||||| || ||| | ||| Sbjct: 477 agggtgctgctcggcgtcgggctgggcttcggcaatcaggccgtgccgctgtacctgtcg 536 Query: 553 gaaatggc 560 |||||||| Sbjct: 537 gaaatggc 544
>ref|XM_450384.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 114 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 173 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 174 gtcatcttcggctatgacatcgg 196 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 277 gcgtcagcaactactgcaagttcgacagcgagct 310 Score = 40.1 bits (20), Expect = 8.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 493 agggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcg 552 |||| ||||||||| |||||||| || || | ||| ||||| ||||| || ||| | ||| Sbjct: 486 agggtgctgctcggcgtcgggctgggcttcggcaatcaggccgtgccgctgtacctgtcg 545 Query: 553 gaaatggc 560 |||||||| Sbjct: 546 gaaatggc 553
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 5083816 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 5083875 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 5083876 gtcatcttcggctatgacatcgg 5083898 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 290 actactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||| ||||| |||| | || || ||||||||||||||||||||| Sbjct: 9315215 actactgcaagtacgacaaccaggtgctgaccctcttcacctcctccctctac 9315163 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| ||||||||||||||| ||| | || ||||| | |||||||| ||| Sbjct: 7164861 ggcggcctcatcttcggctacgacatcggcgtctccggcggcgtcacctccatggacccg 7164920 Query: 229 ttcctc 234 |||||| Sbjct: 7164921 ttcctc 7164926 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 5084079 gcgtcagcaactactgcaagttcgacagcgagct 5084112 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 ||||||| ||||| ||||||||||||||| Sbjct: 14832694 ggcggcgccatcttcggctacgacatcgg 14832722 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cggcgccggtggtggccgcg 112 |||||||||||||||||||| Sbjct: 16303548 cggcgccggtggtggccgcg 16303567
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 85933 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 85992 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 85993 gtcatcttcggctatgacatcgg 86015 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 86196 gcgtcagcaactactgcaagttcgacagcgagct 86229
>dbj|AK107400.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D09, full insert sequence Length = 1436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 114 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 173 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 174 gtcatcttcggctatgacatcgg 196 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 277 gcgtcagcaactactgcaagttcgacagcgagct 310 Score = 40.1 bits (20), Expect = 8.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 493 agggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcg 552 |||| ||||||||| |||||||| || || | ||| ||||| ||||| || ||| | ||| Sbjct: 486 agggtgctgctcggcgtcgggctgggcttcggcaatcaggccgtgccgctgtacctgtcg 545 Query: 553 gaaatggc 560 |||||||| Sbjct: 546 gaaatggc 553
>dbj|AK067908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126N07, full insert sequence Length = 1795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 115 tatggcggcagggtcaccgcgtttgttgcgctctcctgcatcacggcgtccatgggcggc 174 ||||| || ||||||||| | || || | ||||||||||||||| ||| |||||| ||| Sbjct: 106 tatggtggaagggtcaccaccttcgtcgtgctctcctgcatcaccgcgggcatgggaggc 165 Query: 175 gtcatctacggctacgacatcgg 197 ||||||| |||||| |||||||| Sbjct: 166 gtcatcttcggctatgacatcgg 188 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 281 gcgtaagcaactactgcaagttcgacagccagct 314 |||| |||||||||||||||||||||||| |||| Sbjct: 269 gcgtcagcaactactgcaagttcgacagcgagct 302 Score = 40.1 bits (20), Expect = 8.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 493 agggcgctgctcggtgtcgggctaggatttgccaaccaggcagtgccactctacttatcg 552 |||| ||||||||| |||||||| || || | ||| ||||| ||||| || ||| | ||| Sbjct: 478 agggtgctgctcggcgtcgggctgggcttcggcaatcaggccgtgccgctgtacctgtcg 537 Query: 553 gaaatggc 560 |||||||| Sbjct: 538 gaaatggc 545
>ref|NM_125545.3| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G61520 mRNA, complete cds Length = 1975 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 193 ccatgggcggtgtcatcttcggctacgacatcggggt 229
>gb|AY128303.1| Arabidopsis thaliana AT5g61520/k11j9_40 mRNA, complete cds Length = 2028 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 130 ccatgggcggtgtcatcttcggctacgacatcggggt 166
>emb|BX829776.1|CNS0A1JO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1621 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 193 ccatgggcggtgtcatcttcggctacgacatcggggt 229
>emb|BX830816.1|CNS0A0OR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1689 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 133 ccatgggcggtgtcatcttcggctacgacatcggggt 169
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 290 actactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||| ||||| |||| | || || ||||||||||||||||||||| Sbjct: 140506 actactgcaagtacgacaaccaggtgctgaccctcttcacctcctccctctac 140454
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 15656 ccatgggcggtgtcatcttcggctacgacatcggggt 15620
>emb|AJ002399.1|ATAJ2399 Arabidopsis thaliana mRNA for monosaccharide transporter STP3 Length = 1915 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 164 ccatgggcggcgtcatctacggctacgacatcggggt 200 |||||||||| ||||||| |||||||||||||||||| Sbjct: 117 ccatgggcggtgtcatcttcggctacgacatcggggt 153
>dbj|AK107018.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H05, full insert sequence Length = 1998 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 290 actactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||| ||||| |||| | || || ||||||||||||||||||||| Sbjct: 1462 actactgcaagtacgacaaccaggtgctgaccctcttcacctcctccctctac 1410
>dbj|AK067346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106G10, full insert sequence Length = 2150 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 290 actactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||| ||||| |||| | || || ||||||||||||||||||||| Sbjct: 559 actactgcaagtacgacaaccaggtgctgaccctcttcacctcctccctctac 611
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 96359 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 96300 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 6206413 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 6206362
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 30359 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 30300
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 28859 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 28918
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 96359 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 96300 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 6205626 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 6205575
>dbj|AK120679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162J03, full insert sequence Length = 1981 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 1436 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 1377
>dbj|AK100524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100P07, full insert sequence Length = 2045 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 373 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 432
>dbj|AK069891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037O19, full insert sequence Length = 2388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 286 agcaactactgcaagttcgacagccagctccttacgctcttcacctcctccctctacatc 345 |||||||||||| || |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 250 agcaactactgccgctttgacagcgagctcctcaccgtcttcacctcctccctctacatc 309
>gb|AY822464.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 8 (MST8) mRNA, complete cds Length = 1542 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| |||| || || ||||||||||| || |||||| Sbjct: 223 tactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctac 273 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 100 ggcggcctcatcttcggctacgacatcgg 128
>ref|NM_193582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| ||| || |||||||||||||| || |||||| Sbjct: 217 tactgcaagttcgacagcgagccgctcacgctcttcacctcgtcgctctac 267 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| ||||||||||||||| || | || |||||| |||| ||||| ||| Sbjct: 94 ggcggcctcatcttcggctacgacatcggcatctccggtggcgtgacgtcgatggacccg 153 Query: 229 ttcct 233 ||||| Sbjct: 154 ttcct 158
>ref|NM_193581.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| |||| || || ||||||||||| || |||||| Sbjct: 223 tactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctac 273 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 100 ggcggcctcatcttcggctacgacatcgg 128
>gb|AY538260.1| Vitis vinifera putative hexose transporter (HT4) mRNA, complete cds Length = 1777 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 520 tttgccaaccaggcagtgccactctacttatcggaaatggcacccacacgatacagggga 579 ||||| ||||||||||||||||| ||| | || |||||||| || || ||||||| || Sbjct: 472 tttgcaaaccaggcagtgccactttacctgtccgaaatggctccaccaagatacagaggg 531 Query: 580 gccttcagcaatggcttccaattcagc 606 || ||| ||||||||| ||||||||| Sbjct: 532 gcaatcaacaatggctttcaattcagc 558
>gb|AY643749.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 7 (MST7) mRNA, complete cds Length = 1539 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| ||| || |||||||||||||| || |||||| Sbjct: 217 tactgcaagttcgacagcgagccgctcacgctcttcacctcgtcgctctac 267 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| ||||||||||||||| || | || |||||| |||| ||||| ||| Sbjct: 94 ggcggcctcatcttcggctacgacatcggcatctccggtggcgtgacgtcgatggacccg 153 Query: 229 ttcct 233 ||||| Sbjct: 154 ttcct 158
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| ||| || |||||||||||||| || |||||| Sbjct: 21721663 tactgcaagttcgacagcgagccgctcacgctcttcacctcgtcgctctac 21721613 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| |||| || || ||||||||||| || |||||| Sbjct: 21716361 tactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctac 21716411 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acgctcttcacctcctccctct 340 |||||||||||||||||||||| Sbjct: 29044236 acgctcttcacctcctccctct 29044257 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 21721880 ggcggcctcatcttcggctacgacatcgg 21721852 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 21716155 ggcggcctcatcttcggctacgacatcgg 21716183
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| ||| || |||||||||||||| || |||||| Sbjct: 73714 tactgcaagttcgacagcgagccgctcacgctcttcacctcgtcgctctac 73664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| |||| || || ||||||||||| || |||||| Sbjct: 68412 tactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctac 68462 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 73931 ggcggcctcatcttcggctacgacatcgg 73903 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 68206 ggcggcctcatcttcggctacgacatcgg 68234
>dbj|AK069327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H11, full insert sequence Length = 1702 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccagctccttacgctcttcacctcctccctctac 342 |||||||||||||||||| |||| || || ||||||||||| || |||||| Sbjct: 309 tactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctac 359 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 186 ggcggcctcatcttcggctacgacatcgg 214
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| ||||||||||||||| ||| | || ||||| | |||||||| ||| Sbjct: 16966 ggcggcctcatcttcggctacgacatcggcgtctccggcggcgtcacctccatggacccg 17025 Query: 229 ttcctc 234 |||||| Sbjct: 17026 ttcctc 17031
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| ||||||||||||||| ||| | || ||||| | |||||||| ||| Sbjct: 116940 ggcggcctcatcttcggctacgacatcggcgtctccggcggcgtcacctccatggacccg 116999 Query: 229 ttcctc 234 |||||| Sbjct: 117000 ttcctc 117005
>dbj|AK065807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F14, full insert sequence Length = 1850 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 ||||||| ||||| ||||||||||||||| || | || || ||| |||||||||| ||| Sbjct: 207 ggcggcgccatcttcggctacgacatcggcatctccgggggagtgacgtccatggatccg 266 Query: 229 ttcctc 234 |||||| Sbjct: 267 ttcctc 272
>gb|BT018728.1| Zea mays clone EL01N0519B06.d mRNA sequence Length = 2099 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 172 ggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccgttc 231 |||| ||||| ||||||||||||||| || | ||||||||| | |||||||| || ||| Sbjct: 424 ggcgccatcttcggctacgacatcggcatctccggaggcgtgacatccatggacccattc 483 Query: 232 ctcggggaattcttccc 248 || | | |||||||||| Sbjct: 484 ctggagaaattcttccc 500
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 ccatggagccgttcctcggggaattc 243 |||||||||||||||||| ||||||| Sbjct: 3859915 ccatggagccgttcctcgtggaattc 3859940
>ref|NM_192212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 acgctcttcacctcctccctct 340 |||||||||||||||||||||| Sbjct: 1097 acgctcttcacctcctccctct 1076
>gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224566 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 329 cctcctccctctacatctcagggctg 354 |||||||||||||| ||||||||||| Sbjct: 142957 cctcctccctctacctctcagggctg 142932
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acgctcttcacctcctccctct 340 |||||||||||||||||||||| Sbjct: 88594 acgctcttcacctcctccctct 88615
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acgctcttcacctcctccctct 340 |||||||||||||||||||||| Sbjct: 4602 acgctcttcacctcctccctct 4623
>gb|AC135608.7| Mus musculus strain C57BL/6J clone rp23-408d14, complete sequence Length = 213801 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 329 cctcctccctctacatctcagggctg 354 |||||||||||||| ||||||||||| Sbjct: 209590 cctcctccctctacctctcagggctg 209565
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 94 ggcgccggtggtggccgcgagtatggcggc 123 |||||||||||||||| |||| |||||||| Sbjct: 1615245 ggcgccggtggtggccacgaggatggcggc 1615274
>dbj|AK108651.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-C09, full insert sequence Length = 1433 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 acgctcttcacctcctccctct 340 |||||||||||||||||||||| Sbjct: 1231 acgctcttcacctcctccctct 1210
>ref|XM_464184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 337 tactgcaagttcgacagccag 357
>ref|XM_506721.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.6 mRNA Length = 2040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 338 tactgcaagttcgacagccag 358
>ref|XM_472687.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| |||||||||| |||| || | || ||||| ||| | ||||||||| Sbjct: 106 ggcggcctcatcttcggctacgacgtcggcatctcaggcggcgtctcgacgatggagccg 165 Query: 229 ttcct 233 ||||| Sbjct: 166 ttcct 170
>ref|XM_472711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 103 ggcggcctcatcttcggctacgacatcgg 131
>gb|DQ124020.1| Coffea arabica x Coffea canephora clone HT-SSH1-B01 mRNA sequence Length = 429 Score = 42.1 bits (21), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 taagcaactactgcaagttcgacagcca 311 |||||||||||||||| || |||||||| Sbjct: 30 taagcaactactgcaaattngacagcca 57
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 94701 ggcggcctcatcttcggctacgacatcgg 94729 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 56229 ggcggcctcatcttcggctacgacatcgg 56257
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 161132 ggcggcctcatcttcggctacgacatcgg 161160
>gb|AF418137.1|AF418137 Desulfonatronum lacustre DSM 10312 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 890 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 cagcggcggggctgtgaacgtgtac 477 ||||||||| ||||||||||||||| Sbjct: 444 cagcggcggcgctgtgaacgtgtac 468
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 22757505 ggcggcctcatcttcggctacgacatcgg 22757533 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 22719032 ggcggcctcatcttcggctacgacatcgg 22719060
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 3266434 tactgcaagttcgacagccag 3266454
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 ||||||| ||||| ||||||||||||||| Sbjct: 118083 ggcggcgccatcttcggctacgacatcgg 118111
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 138621 tactgcaagttcgacagccag 138641
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 ||||||| ||||| ||||||||||||||| Sbjct: 41033 ggcggcgccatcttcggctacgacatcgg 41061
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 15294 tactgcaagttcgacagccag 15314
>dbj|AK119771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F02, full insert sequence Length = 1754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 337 tactgcaagttcgacagccag 357
>dbj|AK108820.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-E11, full insert sequence Length = 1801 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| |||||||||| |||| || | || ||||| ||| | ||||||||| Sbjct: 270 ggcggcctcatcttcggctacgacgtcggcatctcaggcggcgtctcgacgatggagccg 329 Query: 229 ttcct 233 ||||| Sbjct: 330 ttcct 334
>dbj|AK072059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111I22, full insert sequence Length = 1847 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcgg 197 |||||| |||||| ||||||||||||||| Sbjct: 196 ggcggcctcatcttcggctacgacatcgg 224
>dbj|AK070615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D11, full insert sequence Length = 2040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tactgcaagttcgacagccag 312 ||||||||||||||||||||| Sbjct: 338 tactgcaagttcgacagccag 358
>dbj|AB052883.1| Oryza sativa OsMST1 mRNA for monosaccharide transporter 1, complete cds Length = 1557 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 169 ggcggcgtcatctacggctacgacatcggggtcgcgggaggcgtgtcgtccatggagccg 228 |||||| |||||| |||||||||| |||| || | || ||||| ||| | ||||||||| Sbjct: 106 ggcggcctcatcttcggctacgacgtcggcatctcaggcggcgtctcgacgatggagccg 165 Query: 229 ttcct 233 ||||| Sbjct: 166 ttcct 170
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cggcgccggtggtggccgcg 112 |||||||||||||||||||| Sbjct: 3246519 cggcgccggtggtggccgcg 3246500
>gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence Length = 1456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cggcgccggtggtggccgcg 112 |||||||||||||||||||| Sbjct: 255 cggcgccggtggtggccgcg 274
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cgccggcgcggcggtcagcggcgg 461 |||||||||||||| ||||||||| Sbjct: 54194 cgccggcgcggcgggcagcggcgg 54217
>ref|XM_544614.2| PREDICTED: Canis familiaris similar to Serine/threonine-protein kinase PAK 6 (p21-activated kinase 6) (PAK-6) (PAK-5) (LOC487490), mRNA Length = 2907 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctacatctcagggctgctca 358 |||||||||||||||||||| Sbjct: 1101 ctacatctcagggctgctca 1120
>ref|XM_001004420.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 4 (Ankrd11), mRNA Length = 8387 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7198 ttgccaaccaggcagtgcca 7217
>ref|XM_001004426.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 5 (Ankrd11), mRNA Length = 9837 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 8648 ttgccaaccaggcagtgcca 8667
>ref|XM_001004428.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 7 (Ankrd11), mRNA Length = 17059 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 15870 ttgccaaccaggcagtgcca 15889
>ref|XM_001004417.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 3 (Ankrd11), mRNA Length = 8997 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7808 ttgccaaccaggcagtgcca 7827
>ref|XM_001004427.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 6 (Ankrd11), mRNA Length = 8961 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7772 ttgccaaccaggcagtgcca 7791
>ref|XM_917591.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 11 (Ankrd11), mRNA Length = 8885 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7697 ttgccaaccaggcagtgcca 7716
>ref|XM_902609.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 4 (Ankrd11), mRNA Length = 8386 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7198 ttgccaaccaggcagtgcca 7217
>ref|XM_902607.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 3 (Ankrd11), mRNA Length = 9836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 8648 ttgccaaccaggcagtgcca 8667
>ref|XM_902605.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 2 (Ankrd11), mRNA Length = 17058 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 15870 ttgccaaccaggcagtgcca 15889
>ref|XM_902618.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 9 (Ankrd11), mRNA Length = 8996 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 7808 ttgccaaccaggcagtgcca 7827
>ref|XM_134514.6| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 1 (Ankrd11), mRNA Length = 9197 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 8009 ttgccaaccaggcagtgcca 8028
>gb|AY342321.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 4 (MST4) mRNA, complete cds Length = 1548 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 71 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 122
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ccggcgcggcggtcagcggc 459 |||||||||||||||||||| Sbjct: 2484769 ccggcgcggcggtcagcggc 2484750
>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1 Contains STSs and GSSs, complete sequence Length = 143712 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tcacctcctccctctacatc 345 |||||||||||||||||||| Sbjct: 136353 tcacctcctccctctacatc 136334
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 cggcgcggcggtcagcggcggggc 464 ||||||||||||||||||| |||| Sbjct: 37390 cggcgcggcggtcagcggcagggc 37413
>gb|BC059876.1| Mus musculus ankyrin repeat domain 11, mRNA (cDNA clone IMAGE:6810694), partial cds Length = 3131 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 1945 ttgccaaccaggcagtgcca 1964
>gb|AY526334.1| Photorhabdus temperata strain Meg SctV (sctV) gene, partial cds Length = 484 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 aatggcttccaattcagcct 608 |||||||||||||||||||| Sbjct: 285 aatggcttccaattcagcct 266
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 45024 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 44973
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 19621 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 19570
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cggcgccggtggtggccgcg 112 |||||||||||||||||||| Sbjct: 120064 cggcgccggtggtggccgcg 120083
>emb|X78048.1|CGGTHIIB C.gariepinus pre-pro-catfish gonadotropin-releasing hormone mRNA Length = 351 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gcgctctcctgcatcacggc 161 |||||||||||||||||||| Sbjct: 185 gcgctctcctgcatcacggc 166
>emb|X78049.1|CGGTRIC C.gariepinus pre-pro-catfish gonadotropin-releasing hormone mRNA Length = 351 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gcgctctcctgcatcacggc 161 |||||||||||||||||||| Sbjct: 185 gcgctctcctgcatcacggc 166
>dbj|AK099306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140P21, full insert sequence Length = 1980 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 167 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 218
>dbj|AK069202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G17, full insert sequence Length = 1998 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 146 tctcctgcatcacggcgtccatgggcggcgtcatctacggctacgacatcgg 197 |||||||||||| |||| ||| |||||| |||| | |||||||||| |||| Sbjct: 163 tctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcgg 214
>gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, complete sequence Length = 195405 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ttgccaaccaggcagtgcca 540 |||||||||||||||||||| Sbjct: 64920 ttgccaaccaggcagtgcca 64901
>dbj|AB034638.1| Nicotiana tabacum mRNA for RNase, complete cds Length = 877 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 caatggcttccaattcagcc 607 |||||||||||||||||||| Sbjct: 40 caatggcttccaattcagcc 59 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,330,621 Number of Sequences: 3902068 Number of extensions: 3330621 Number of successful extensions: 64203 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 62977 Number of HSP's gapped (non-prelim): 1218 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
