| Clone Name | basd13b20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GPSN2_HUMAN (Q9NZ01) Synaptic glycoprotein SC2 | 134 | 3e-31 | 2 | GPSN2_RAT (Q64232) Synaptic glycoprotein SC2 | 132 | 1e-30 | 3 | GPSN2_MOUSE (Q9CY27) Synaptic glycoprotein SC2 | 132 | 1e-30 | 4 | CBIO2_HALSA (Q9HPH7) Putative cobalt import ATP-binding protein ... | 31 | 3.5 | 5 | O51I1_HUMAN (Q9H343) Olfactory receptor 51I1 (Odorant receptor H... | 30 | 7.7 |
|---|
>GPSN2_HUMAN (Q9NZ01) Synaptic glycoprotein SC2| Length = 308 Score = 134 bits (336), Expect = 3e-31 Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Frame = +1 Query: 133 AKVADLQEAIHAKTKKYYPARQRLTLPAQPGKSGKPVVLNQKASLSEYCEKGSGSLTVVF 312 A +A+++ ++YPARQ L L + GKS K + QK + + T+ F Sbjct: 27 ATIAEIKNLFTKTHPQWYPARQSLRLDPK-GKSLKDEDVLQKLPVGT-------TATLYF 78 Query: 313 KDLGPQVYYSTLFFWEYVGPLIIYPIFYYLPVYKY-FGYEGERVIHPVQTYAMYYFCFHY 489 +DLG Q+ + T+F EY GPL IY +FY+ + Y Y+ H V A FHY Sbjct: 79 RDLGAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGHKYDFTSSRHTVVHLACICHSFHY 138 Query: 490 FKRIMETFFVHRFSHATSPVSNVFRNCAYYWTFGAYIAYYCNHPLYT 630 KR++ET FVHRFSH T P+ N+F+NC YYW F A++AYY NHPLYT Sbjct: 139 IKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
>GPSN2_RAT (Q64232) Synaptic glycoprotein SC2| Length = 308 Score = 132 bits (331), Expect = 1e-30 Identities = 70/171 (40%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Frame = +1 Query: 121 LKDSAKVADLQEAIHAKTKKYYPARQRLTLPAQPGKSGKPVVLNQKASLSEYCEKGSGSL 300 ++ A +++++ ++YPARQ L L + GKS K + QK + + Sbjct: 23 VEPQATISEIKTLFTKTHPQWYPARQSLRLDPK-GKSLKDEDVLQKLPVGT-------TA 74 Query: 301 TVVFKDLGPQVYYSTLFFWEYVGPLIIYPIFYYLPVYKYFG-YEGERVIHPVQTYAMYYF 477 T+ F+DLG Q+ + T+F EY GPL IY +FY+ + Y Y+ H V A Sbjct: 75 TLYFRDLGAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRKYDFTSSRHTVVHLACMCH 134 Query: 478 CFHYFKRIMETFFVHRFSHATSPVSNVFRNCAYYWTFGAYIAYYCNHPLYT 630 FHY KR++ET FVHRFSH T P+ N+F+NC YYW F A++AYY NHPLYT Sbjct: 135 SFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
>GPSN2_MOUSE (Q9CY27) Synaptic glycoprotein SC2| Length = 308 Score = 132 bits (331), Expect = 1e-30 Identities = 70/171 (40%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Frame = +1 Query: 121 LKDSAKVADLQEAIHAKTKKYYPARQRLTLPAQPGKSGKPVVLNQKASLSEYCEKGSGSL 300 ++ A +++++ ++YPARQ L L + GKS K + QK + + Sbjct: 23 VEPQATISEIKTLFTKTHPQWYPARQSLRLDPK-GKSLKDEDVLQKLPVGT-------TA 74 Query: 301 TVVFKDLGPQVYYSTLFFWEYVGPLIIYPIFYYLPVYKYFG-YEGERVIHPVQTYAMYYF 477 T+ F+DLG Q+ + T+F EY GPL IY +FY+ + Y Y+ H V A Sbjct: 75 TLYFRDLGAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRKYDFTSSRHTVVHLACMCH 134 Query: 478 CFHYFKRIMETFFVHRFSHATSPVSNVFRNCAYYWTFGAYIAYYCNHPLYT 630 FHY KR++ET FVHRFSH T P+ N+F+NC YYW F A++AYY NHPLYT Sbjct: 135 SFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
>CBIO2_HALSA (Q9HPH7) Putative cobalt import ATP-binding protein cbiO 2| Length = 242 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 Query: 399 VIEDGVDDKRADVFPEEERAVVDLRA*IFEDY 304 V+EDGV D R D + A DLR+ +F+D+ Sbjct: 205 VLEDGVIDYRGDTLSQSLAAEYDLRSYVFDDW 236
>O51I1_HUMAN (Q9H343) Olfactory receptor 51I1 (Odorant receptor HOR5'beta11)| (Olfactory receptor OR11-39) Length = 314 Score = 29.6 bits (65), Expect = 7.7 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 343 TLFFWEYVGPLIIYPIFYYLPVYKY--FGYEGERVIHPVQTYAMYYFCFHYFKRIMETFF 516 TL FWE P + P++Y+L + G + + T+ Y + +++ FF Sbjct: 49 TLVFWE---PALHQPMYYFLSMLALNDLGVSFSTLPTVISTFCFNYNHVAFNACLVQMFF 105 Query: 517 VHRFSHATSPV 549 +H FS S + Sbjct: 106 IHTFSFMESGI 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,067,269 Number of Sequences: 219361 Number of extensions: 1475599 Number of successful extensions: 4012 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4006 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)