ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13b20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550155.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1226 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 87 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 146 Query: 124 aaggactcggccaaggtcgcggatctgcaggaggccatccacgccaagactaagaagtat 183 ||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 147 aaggactcggctaaggtcgcggatctgcaggatgccatctatgccaagactaagaagtat 206 Query: 184 tatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctggaaagccagtt 243 || ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 207 taccctgctaggcagcggctcaccctccctatccaacctggaaaatcaggaaagccagtt 266 Query: 244 gtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccgggtccctgaca 303 ||||| | | |||||||||||||||||||||||| || |||||||| || ||||||||| Sbjct: 267 gtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctggatccctgaca 326 Query: 304 gtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttcttctgggaatac 363 || ||||| || ||||||||||| ||||||| |||||||||||| ||||||| |||||| Sbjct: 327 gtggtctttaaggatttaggcccacaggtcttctacagcacgctgttcttctttgaatac 386 Query: 364 gtcggccctcttatcatctaccccatcttctattacctgcccgtctacaaatactttggg 423 | || |||||| | ||||||||||| ||||||||| |||| ||||||||||| || || Sbjct: 387 ttgggtcctcttcttatctaccccatgttctattacttgcctgtctacaaatatttcgga 446 Query: 424 tatgagggagagcgggtcatccaccccgtccagacctacgccatgtactacttctgtttc 483 || ||||||||||||||||| || || |||||||| |||||||||||||| | |||||| Sbjct: 447 tacgagggagagcgggtcatgcatcctgtccagacttacgccatgtactattggtgtttc 506 Query: 484 cactacttcaagaggatcatggagaccttcttcgtccaccgcttcagccacgcgacttcc 543 |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 507 cactacttcaagaggatcatggagacgttctttgttcaccgcttcagccacgcgacttct 566 Query: 544 cccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggagcctacattgcc 603 || || ||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 567 cctgtatcaaatgtcttcaggaactgtgcctactactggacctttggagcttacattgct 626 Query: 604 tactactgcaaccaccctctgtacacc 630 ||||||||||||||||| || |||||| Sbjct: 627 tactactgcaaccacccgctttacacc 653
>dbj|AK060948.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F04, full insert sequence Length = 1221 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 82 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 141 Query: 124 aaggactcggccaaggtcgcggatctgcaggaggccatccacgccaagactaagaagtat 183 ||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 142 aaggactcggctaaggtcgcggatctgcaggatgccatctatgccaagactaagaagtat 201 Query: 184 tatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctggaaagccagtt 243 || ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 202 taccctgctaggcagcggctcaccctccctatccaacctggaaaatcaggaaagccagtt 261 Query: 244 gtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccgggtccctgaca 303 ||||| | | |||||||||||||||||||||||| || |||||||| || ||||||||| Sbjct: 262 gtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctggatccctgaca 321 Query: 304 gtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttcttctgggaatac 363 || ||||| || ||||||||||| ||||||| |||||||||||| ||||||| |||||| Sbjct: 322 gtggtctttaaggatttaggcccacaggtcttctacagcacgctgttcttctttgaatac 381 Query: 364 gtcggccctcttatcatctaccccatcttctattacctgcccgtctacaaatactttggg 423 | || |||||| | ||||||||||| ||||||||| |||| ||||||||||| || || Sbjct: 382 ttgggtcctcttcttatctaccccatgttctattacttgcctgtctacaaatatttcgga 441 Query: 424 tatgagggagagcgggtcatccaccccgtccagacctacgccatgtactacttctgtttc 483 || ||||||||||||||||| || || |||||||| |||||||||||||| | |||||| Sbjct: 442 tacgagggagagcgggtcatgcatcctgtccagacttacgccatgtactattggtgtttc 501 Query: 484 cactacttcaagaggatcatggagaccttcttcgtccaccgcttcagccacgcgacttcc 543 |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 502 cactacttcaagaggatcatggagacgttctttgttcaccgcttcagccacgcgacttct 561 Query: 544 cccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggagcctacattgcc 603 || || ||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 562 cctgtatcaaatgtcttcaggaactgtgcctactactggacctttggagcttacattgct 621 Query: 604 tactactgcaaccaccctctgtacacc 630 ||||||||||||||||| || |||||| Sbjct: 622 tactactgcaaccacccgctttacacc 648
>gb|BT018162.1| Zea mays clone EL01N0556D07.c mRNA sequence Length = 1165 Score = 597 bits (301), Expect = e-167 Identities = 499/565 (88%) Strand = Plus / Plus Query: 66 gaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctcaa 125 ||||||| | |||||||||||||||||||| |||||||||||||||||| |||| ||||| Sbjct: 104 gaaggtcacggtcgtgtcccggagcggccgggaggtcgtcaagggcggcatcgacctcaa 163 Query: 126 ggactcggccaaggtcgcggatctgcaggaggccatccacgccaagactaagaagtatta 185 ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 164 ggactcggccaaggtcgcggacctgcaggaggccatccatgccaggactaagaagtatta 223 Query: 186 tcctgctaggcaacggctcaccctccctgcacaacctggaaaatctggaaagccagttgt 245 |||| ||||||| |||||||||||||| |||||||||||| || ||||||||||| Sbjct: 224 tccttctaggcagcggctcaccctcccccttcaacctggaaaaggcgggaagccagttgt 283 Query: 246 cctcaatcaaaaggccagcctatcagaatactgtgagaagggttccgggtccctgacagt 305 ||||| || ||||||||||| ||||||||| ||||||||||| ||||| |||||||| Sbjct: 284 cctcagtccgaaggccagcctgctagaatactgcgagaagggttctgggtcactgacagt 343 Query: 306 agtcttcaaagatttaggcccgcaggtctactacagcacgctcttcttctgggaatacgt 365 ||||||||||||||||| || ||||||||||||||||| || ||||||| || ||| | Sbjct: 344 ggtcttcaaagatttagggccacaggtctactacagcacactgttcttcttcgagtacct 403 Query: 366 cggccctcttatcatctaccccatcttctattacctgcccgtctacaaatactttgggta 425 || ||||| |||||||||||||| ||||| || |||||||||||||| ||||| ||||| Sbjct: 404 gggtcctctcatcatctaccccatgttctactatctgcccgtctacaagtacttcgggta 463 Query: 426 tgagggagagcgggtcatccaccccgtccagacctacgccatgtactacttctgtttcca 485 ||||| ||||||| ||| ||||| ||||||||||||||||||||||||| || ||||| Sbjct: 464 cgagggggagcgggccatgcaccctgtccagacctacgccatgtactactggtgcttcca 523 Query: 486 ctacttcaagaggatcatggagaccttcttcgtccaccgcttcagccacgcgacttcccc 545 |||||||||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 524 ctacttcaagcggatcatggagacgttcttcgtgcaccgcttcagccacgcgacgtcgcc 583 Query: 546 cgtgtcaaacgtcttcagaaactgtgcctactactggacctttggagcctacattgccta 605 | || ||||||||||| ||||||||||||||||||||||| || ||||||||||| || Sbjct: 584 gctctcgaacgtcttcaggaactgtgcctactactggaccttcggcgcctacattgctta 643 Query: 606 ctactgcaaccaccctctgtacacc 630 ||||||||||||||| ||||||||| Sbjct: 644 ctactgcaaccacccgctgtacacc 668
>gb|AY106269.1| Zea mays PCO138212 mRNA sequence Length = 1343 Score = 581 bits (293), Expect = e-162 Identities = 503/573 (87%) Strand = Plus / Plus Query: 58 gggagcatgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtc 117 ||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||| || Sbjct: 280 gggaggatgaaggtcacggtcgtgtcccggagcggccgggaggtcgtcaagggcggcatc 339 Query: 118 gagctcaaggactcggccaaggtcgcggatctgcaggaggccatccacgccaagactaag 177 || |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 340 gacctcaaggactcggccaaggtcgcggacctgcaggaggccatccatgccaggactaag 399 Query: 178 aagtattatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctggaaag 237 |||||||||||| ||||||| |||||||||||||| |||||||||||| || ||| Sbjct: 400 aagtattatccttctaggcagcggctcaccctcccccttcaacctggaaaaggcgggaag 459 Query: 238 ccagttgtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccgggtcc 297 ||||||||||||| || ||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 460 ccagttgtcctcagtccgaaggccagcctgctagaatactgcgagaagggttctgggtca 519 Query: 298 ctgacagtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttcttctgg 357 |||||||| ||||||||||||||||| || ||||||||||||||||| || ||||||| Sbjct: 520 ctgacagtggtcttcaaagatttagggccacaggtctactacagcacactgttcttcttc 579 Query: 358 gaatacgtcggccctcttatcatctaccccatcttctattacctgcccgtctacaaatac 417 || ||| | || ||||| |||||||||||||| ||||| || |||||||||||||| ||| Sbjct: 580 gagtacctgggtcctctcatcatctaccccatgttctactatctgcccgtctacaagtac 639 Query: 418 tttgggtatgagggagagcgggtcatccaccccgtccagacctacgccatgtactacttc 477 || ||| | ||||| ||||||| ||| ||||| |||||||||||||| |||||||||| Sbjct: 640 ttcgggcacgagggggagcgggccatgcaccctgtccagacctacgcaatgtactactgg 699 Query: 478 tgtttccactacttcaagaggatcatggagaccttcttcgtccaccgcttcagccacgcg 537 || ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 700 tgcttccactacttcaagcggatcatggagacgttcttcgtgcaccgcttcagccacgcg 759 Query: 538 acttcccccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggagcctac 597 || || || | || ||||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 760 acgtcgccgctctcgaacgtcttcaggaactgtgcctactactggaccttcggcgcttac 819 Query: 598 attgcctactactgcaaccaccctctgtacacc 630 ||||| ||||||||||||||||| ||||||||| Sbjct: 820 attgcttactactgcaaccacccgctgtacacc 852
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 488 bits (246), Expect = e-134 Identities = 405/458 (88%) Strand = Plus / Minus Query: 173 ctaagaagtattatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctg 232 ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| | Sbjct: 2707825 ctaagaagtattaccctgctaggcagcggctcaccctccctatccaacctggaaaatcag 2707766 Query: 233 gaaagccagttgtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccg 292 |||||||||||||||| | | |||||||||||||||||||||||| || |||||||| | Sbjct: 2707765 gaaagccagttgtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctg 2707706 Query: 293 ggtccctgacagtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttct 352 | ||||||||||| ||||| || ||||||||||| ||||||| |||||||||||| |||| Sbjct: 2707705 gatccctgacagtggtctttaaggatttaggcccacaggtcttctacagcacgctgttct 2707646 Query: 353 tctgggaatacgtcggccctcttatcatctaccccatcttctattacctgcccgtctaca 412 ||| |||||| | || |||||| | ||||||||||| ||||||||| |||| ||||||| Sbjct: 2707645 tctttgaatacttgggtcctcttcttatctaccccatgttctattacttgcctgtctaca 2707586 Query: 413 aatactttgggtatgagggagagcgggtcatccaccccgtccagacctacgccatgtact 472 |||| || || || ||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 2707585 aatatttcggatacgagggagagcgggtcatgcatcctgtccagacttacgccatgtact 2707526 Query: 473 acttctgtttccactacttcaagaggatcatggagaccttcttcgtccaccgcttcagcc 532 | | |||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 2707525 attggtgtttccactacttcaagaggatcatggagacgttctttgttcaccgcttcagcc 2707466 Query: 533 acgcgacttcccccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggag 592 |||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 2707465 acgcgacttctcctgtatcaaatgtcttcaggaactgtgcctactactggacctttggag 2707406 Query: 593 cctacattgcctactactgcaaccaccctctgtacacc 630 | |||||||| ||||||||||||||||| || |||||| Sbjct: 2707405 cttacattgcttactactgcaaccacccgctttacacc 2707368 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 2710336 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 2710277 Query: 124 aaggactcgg 133 |||||||||| Sbjct: 2710276 aaggactcgg 2710267 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 136 aaggtcgcggatctgcaggaggccatccacgccaagactaag 177 |||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 2710050 aaggtcgcggatctgcaggatgccatctatgccaagagtaag 2710009
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434B04 Length = 167029 Score = 488 bits (246), Expect = e-134 Identities = 405/458 (88%) Strand = Plus / Minus Query: 173 ctaagaagtattatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctg 232 ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| | Sbjct: 157600 ctaagaagtattaccctgctaggcagcggctcaccctccctatccaacctggaaaatcag 157541 Query: 233 gaaagccagttgtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccg 292 |||||||||||||||| | | |||||||||||||||||||||||| || |||||||| | Sbjct: 157540 gaaagccagttgtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctg 157481 Query: 293 ggtccctgacagtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttct 352 | ||||||||||| ||||| || ||||||||||| ||||||| |||||||||||| |||| Sbjct: 157480 gatccctgacagtggtctttaaggatttaggcccacaggtcttctacagcacgctgttct 157421 Query: 353 tctgggaatacgtcggccctcttatcatctaccccatcttctattacctgcccgtctaca 412 ||| |||||| | || |||||| | ||||||||||| ||||||||| |||| ||||||| Sbjct: 157420 tctttgaatacttgggtcctcttcttatctaccccatgttctattacttgcctgtctaca 157361 Query: 413 aatactttgggtatgagggagagcgggtcatccaccccgtccagacctacgccatgtact 472 |||| || || || ||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 157360 aatatttcggatacgagggagagcgggtcatgcatcctgtccagacttacgccatgtact 157301 Query: 473 acttctgtttccactacttcaagaggatcatggagaccttcttcgtccaccgcttcagcc 532 | | |||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 157300 attggtgtttccactacttcaagaggatcatggagacgttctttgttcaccgcttcagcc 157241 Query: 533 acgcgacttcccccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggag 592 |||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 157240 acgcgacttctcctgtatcaaatgtcttcaggaactgtgcctactactggacctttggag 157181 Query: 593 cctacattgcctactactgcaaccaccctctgtacacc 630 | |||||||| ||||||||||||||||| || |||||| Sbjct: 157180 cttacattgcttactactgcaaccacccgctttacacc 157143 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 160111 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 160052 Query: 124 aaggactcgg 133 |||||||||| Sbjct: 160051 aaggactcgg 160042 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 136 aaggtcgcggatctgcaggaggccatccacgccaagactaag 177 |||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 159825 aaggtcgcggatctgcaggatgccatctatgccaagagtaag 159784
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 488 bits (246), Expect = e-134 Identities = 405/458 (88%) Strand = Plus / Minus Query: 173 ctaagaagtattatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctg 232 ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| | Sbjct: 13502 ctaagaagtattaccctgctaggcagcggctcaccctccctatccaacctggaaaatcag 13443 Query: 233 gaaagccagttgtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccg 292 |||||||||||||||| | | |||||||||||||||||||||||| || |||||||| | Sbjct: 13442 gaaagccagttgtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctg 13383 Query: 293 ggtccctgacagtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttct 352 | ||||||||||| ||||| || ||||||||||| ||||||| |||||||||||| |||| Sbjct: 13382 gatccctgacagtggtctttaaggatttaggcccacaggtcttctacagcacgctgttct 13323 Query: 353 tctgggaatacgtcggccctcttatcatctaccccatcttctattacctgcccgtctaca 412 ||| |||||| | || |||||| | ||||||||||| ||||||||| |||| ||||||| Sbjct: 13322 tctttgaatacttgggtcctcttcttatctaccccatgttctattacttgcctgtctaca 13263 Query: 413 aatactttgggtatgagggagagcgggtcatccaccccgtccagacctacgccatgtact 472 |||| || || || ||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 13262 aatatttcggatacgagggagagcgggtcatgcatcctgtccagacttacgccatgtact 13203 Query: 473 acttctgtttccactacttcaagaggatcatggagaccttcttcgtccaccgcttcagcc 532 | | |||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 13202 attggtgtttccactacttcaagaggatcatggagacgttctttgttcaccgcttcagcc 13143 Query: 533 acgcgacttcccccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggag 592 |||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 13142 acgcgacttctcctgtatcaaatgtcttcaggaactgtgcctactactggacctttggag 13083 Query: 593 cctacattgcctactactgcaaccaccctctgtacacc 630 | |||||||| ||||||||||||||||| || |||||| Sbjct: 13082 cttacattgcttactactgcaaccacccgctttacacc 13045 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 16013 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 15954 Query: 124 aaggactcgg 133 |||||||||| Sbjct: 15953 aaggactcgg 15944 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 136 aaggtcgcggatctgcaggaggccatccacgccaagactaag 177 |||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 15727 aaggtcgcggatctgcaggatgccatctatgccaagagtaag 15686
>dbj|AK066325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062L06, full insert sequence Length = 3501 Score = 480 bits (242), Expect = e-132 Identities = 404/458 (88%) Strand = Plus / Plus Query: 173 ctaagaagtattatcctgctaggcaacggctcaccctccctgcacaacctggaaaatctg 232 ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| | Sbjct: 2385 ctaagaagtattaccctgctaggcagcggctcaccctccctatccaacctggaaaatcag 2444 Query: 233 gaaagccagttgtcctcaatcaaaaggccagcctatcagaatactgtgagaagggttccg 292 |||||||||||||||| | | |||||||||||||||||||||||| || |||||||| | Sbjct: 2445 gaaagccagttgtccttagtgcaaaggccagcctatcagaatactgcgaaaagggttctg 2504 Query: 293 ggtccctgacagtagtcttcaaagatttaggcccgcaggtctactacagcacgctcttct 352 | ||||||||||| ||||| || ||||||||||| ||||||| |||||||||||| |||| Sbjct: 2505 gatccctgacagtggtctttaaggatttaggcccacaggtcttctacagcacgctgttct 2564 Query: 353 tctgggaatacgtcggccctcttatcatctaccccatcttctattacctgcccgtctaca 412 | | |||||| | || |||||| | ||||||||||| ||||||||| |||| ||||||| Sbjct: 2565 tatttgaatacttgggtcctcttcttatctaccccatgttctattacttgcctgtctaca 2624 Query: 413 aatactttgggtatgagggagagcgggtcatccaccccgtccagacctacgccatgtact 472 |||| || || || ||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 2625 aatatttcggatacgagggagagcgggtcatgcatcctgtccagacttacgccatgtact 2684 Query: 473 acttctgtttccactacttcaagaggatcatggagaccttcttcgtccaccgcttcagcc 532 | | |||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 2685 attggtgtttccactacttcaagaggatcatggagacgttctttgttcaccgcttcagcc 2744 Query: 533 acgcgacttcccccgtgtcaaacgtcttcagaaactgtgcctactactggacctttggag 592 |||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 2745 acgcgacttctcctgtatcaaatgtcttcaggaactgtgcctactactggacctttggag 2804 Query: 593 cctacattgcctactactgcaaccaccctctgtacacc 630 | |||||||| ||||||||||||||||| || |||||| Sbjct: 2805 cttacattgcttactactgcaaccacccgctttacacc 2842 Score = 155 bits (78), Expect = 2e-34 Identities = 105/114 (92%) Strand = Plus / Plus Query: 64 atgaaggtctccgtcgtgtcccggagcggccgcgaggtcgtcaagggcggcgtcgagctc 123 |||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 88 atgaaggtgtccgtcgtgtcccggagcggccgggaggtggtcaggggcggcgtcgagctc 147 Query: 124 aaggactcggccaaggtcgcggatctgcaggaggccatccacgccaagactaag 177 ||||||||||| |||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 148 aaggactcggctaaggtcgcggatctgcaggatgccatctatgccaagagtaag 201
>gb|DQ000300.1| Nicotiana benthamiana TSC13 protein (TSC13) mRNA, complete cds Length = 933 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 |||||||| |||||||| || |||||||| |||| ||||||||||||||||| ||||| Sbjct: 379 atccaccctgtccagacatatgccatgtattactggtgtttccactacttcaaacggatc 438 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttc 542 |||||||||||||| || |||||||||||||| || ||||| Sbjct: 439 atggagaccttctttgtgcaccgcttcagccatgccacttc 479
>ref|NM_115394.2| Arabidopsis thaliana CER10/ECR; 3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid elongase AT3G55360 (CER10/ECR) mRNA, complete cds Length = 1319 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 509 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 568 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 569 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 628 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 629 aggaactgtgcttattactggagctttggtgcttacattgc 669
>gb|BT012066.1| Arabidopsis thaliana At3g55360 mRNA sequence Length = 930 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 376 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 435 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 436 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 495 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 496 aggaactgtgcttattactggagctttggtgcttacattgc 536
>gb|AY081583.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete cds Length = 1134 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 379 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 438 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 439 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 498 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 499 aggaactgtgcttattactggagctttggtgcttacattgc 539
>gb|AY065136.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete cds Length = 1218 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 414 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 473 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 474 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 533 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 534 aggaactgtgcttattactggagctttggtgcttacattgc 574
>emb|BX826269.1|CNS0A4Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL95ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 411 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 470 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 471 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 530 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 531 aggaactgtgcttattactggagctttggtgcttacattgc 571
>gb|AY088452.1| Arabidopsis thaliana clone 6774 mRNA, complete sequence Length = 1311 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 506 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 565 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 566 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 625 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 626 aggaactgtgcttattactggagctttggtgcttacattgc 666
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Minus Query: 442 atccaccccgtccagacctacgccatgtactacttctgtttccactacttcaagaggatc 501 ||||| || |||||||| ||||| |||||||||| || || ||||||||||| ||||| Sbjct: 4306 atccatccggtccagacgtacgctatgtactactggtgctttcactacttcaaacggatc 4247 Query: 502 atggagaccttcttcgtccaccgcttcagccacgcgacttcccccgtgtcaaacgtcttc 561 | || || || ||||| || || ||||||||||| || ||||| | || || ||| Sbjct: 4246 ttagaaacgtttttcgtacatcggttcagccacgcaacctccccaatcgggaatgtgttc 4187 Query: 562 agaaactgtgcctactactggacctttggagcctacattgc 602 || |||||||| || ||||||| |||||| || |||||||| Sbjct: 4186 aggaactgtgcttattactggagctttggtgcttacattgc 4146
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 caaggactcggccaaggtcgcg 144 |||||||||||||||||||||| Sbjct: 5646779 caaggactcggccaaggtcgcg 5646758
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 caaggactcggccaaggtcgcg 144 |||||||||||||||||||||| Sbjct: 630520 caaggactcggccaaggtcgcg 630541
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence Length = 209936 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 tctggaaagccagttgtcctca 250 |||||||||||||||||||||| Sbjct: 128006 tctggaaagccagttgtcctca 127985
>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence Length = 155751 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tcaccctccctgcacaacctg 223 ||||||||||||||||||||| Sbjct: 117254 tcaccctccctgcacaacctg 117234
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 36532 ctcgcctcgcctcgctgcctc 36552
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 135833 ctcgcctcgcctcgctgcctc 135853
>ref|XM_587841.2| PREDICTED: Bos taurus similar to CD180 antigen precursor (Lymphocyte antigen 64) (Radioprotective 105 kDa protein) (LOC539518), mRNA Length = 2138 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 tgcacaacctggaaaatctggaaag 237 ||||||||||||||||| ||||||| Sbjct: 546 tgcacaacctggaaaatttggaaag 570
>ref|XM_959933.1| Neurospora crassa OR74A hypothetical protein (NCU02623.1) partial mRNA Length = 726 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ccgcgaggtcgtcaagggcgg 113 ||||||||||||||||||||| Sbjct: 39 ccgcgaggtcgtcaagggcgg 59
>ref|XM_331821.1| Neurospora crassa OR74A hypothetical protein (NCU02623.1) partial mRNA Length = 726 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ccgcgaggtcgtcaagggcgg 113 ||||||||||||||||||||| Sbjct: 39 ccgcgaggtcgtcaagggcgg 59
>ref|XM_540834.2| PREDICTED: Canis familiaris similar to ZK1067.4 (LOC483713), mRNA Length = 1791 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 caaggactcggccaaggtcgc 143 ||||||||||||||||||||| Sbjct: 135 caaggactcggccaaggtcgc 155
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 32667 ctcgcctcgcctcgctgcctc 32647
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcct 28 ||||||||||||||||||||| Sbjct: 229038 cctcgcctcgcctcgctgcct 229018 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 11170567 cctcgcctcgcctcgctgcc 11170548 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 7337096 cctcgcctcgcctcgctgcc 7337077
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 3278453 ctcgcctcgcctcgctgcctc 3278433 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 23713920 cctcgcctcgcctcgctgcc 23713939 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 23502840 ttcttctgggaatacgtcgg 23502859 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 19503205 ttcttctgggaatacgtcgg 19503224 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 17610343 ttcttctgggaatacgtcgg 17610362 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 4256382 ttcttctgggaatacgtcgg 4256363
>gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 of the complete genome Length = 14999 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aaggactcggccaaggtcgcg 144 ||||||||||||||||||||| Sbjct: 3372 aaggactcggccaaggtcgcg 3352
>dbj|AK104405.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D04, full insert sequence Length = 1213 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 122 ctcgcctcgcctcgctgcctc 102
>dbj|AK071185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083P12, full insert sequence Length = 1811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcct 28 ||||||||||||||||||||| Sbjct: 149 cctcgcctcgcctcgctgcct 169
>dbj|AK066507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068F13, full insert sequence Length = 1201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 72 ctcgcctcgcctcgctgcctc 52
>dbj|AK061362.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C01, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 125 ctcgcctcgcctcgctgcctc 105
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ctcgcctcgcctcgctgcctc 29 ||||||||||||||||||||| Sbjct: 3287166 ctcgcctcgcctcgctgcctc 3287146 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 24023637 cctcgcctcgcctcgctgcc 24023656 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 23812776 ttcttctgggaatacgtcgg 23812795 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 19662008 ttcttctgggaatacgtcgg 19662027 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 17704401 ttcttctgggaatacgtcgg 17704420 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 4265076 ttcttctgggaatacgtcgg 4265057
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcct 28 ||||||||||||||||||||| Sbjct: 229038 cctcgcctcgcctcgctgcct 229018 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 11170238 cctcgcctcgcctcgctgcc 11170219 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 7336975 cctcgcctcgcctcgctgcc 7336956
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcct 28 ||||||||||||||||||||| Sbjct: 46218 cctcgcctcgcctcgctgcct 46238
>gb|AC168314.2| Mus musculus BAC clone RP24-229J18 from chromosome 8, complete sequence Length = 191850 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 51439 aaaggccagcctatcagaat 51420 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 34874 aaaggccagcctatcagaat 34855
>ref|XM_522410.1| PREDICTED: Pan troglodytes similar to homeo box C5 (LOC467010), mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 253 cgtgtcccggagcggccgcg 234
>ref|XM_470020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4149 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 1656 ttcttctgggaatacgtcgg 1637
>ref|XM_470016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 1656 ttcttctgggaatacgtcgg 1637
>ref|XM_469027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 245 cctcgcctcgcctcgctgcc 226
>ref|XM_473332.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5496 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 2715 ttcttctgggaatacgtcgg 2696
>ref|XM_473472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 2709 ttcttctgggaatacgtcgg 2690
>gb|AC103612.5| Mus musculus chromosome 5, clone RP24-455E13, complete sequence Length = 152420 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 caacctggaaaatctggaaa 236 |||||||||||||||||||| Sbjct: 8382 caacctggaaaatctggaaa 8363
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 17869 ttcttctgggaatacgtcgg 17888
>gb|AC163449.2| Mus musculus chromosome 3, clone RP23-193H21, complete sequence Length = 199224 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 151436 aaaggccagcctatcagaat 151417
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 37892 ttcttctgggaatacgtcgg 37873
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 118318 cctcgcctcgcctcgctgcc 118299
>gb|AC166648.4| Mus musculus chromosome 5, clone RP23-102C14, complete sequence Length = 203566 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ctgcctcaagccccagcggcggga 46 |||||||| ||||||||||||||| Sbjct: 113242 ctgcctcaggccccagcggcggga 113219
>gb|AC154907.3| Mus musculus BAC clone RP23-312K18 from chromosome 8, complete sequence Length = 182534 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 175299 aaaggccagcctatcagaat 175280 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 158734 aaaggccagcctatcagaat 158715
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 77111 ttcttctgggaatacgtcgg 77130
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 118403 ttcttctgggaatacgtcgg 118422
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 48006 cctcgcctcgcctcgctgcc 48025
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 caacctggaaaatctggaaa 236 |||||||||||||||||||| Sbjct: 229361 caacctggaaaatctggaaa 229342
>ref|NG_005542.1| Homo sapiens homeobox C4/C5/C6 cluster (HOXC4/C5/C6@) on chromosome 12 Length = 40195 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 17030 cgtgtcccggagcggccgcg 17011
>ref|NM_018953.2| Homo sapiens homeobox C5 (HOXC5), mRNA Length = 1613 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 328 cgtgtcccggagcggccgcg 309
>ref|XM_654480.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1968.2), mRNA Length = 822 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tcttcgtccaccgcttcagc 531 |||||||||||||||||||| Sbjct: 335 tcttcgtccaccgcttcagc 354
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 114487 ttcttctgggaatacgtcgg 114506
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 93526 ttcttctgggaatacgtcgg 93545
>gb|DQ175857.1| Hordeum vulgare clone DsC28 Ds insertion site flanking region genomic sequence Length = 838 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cccgcaggtctactacagca 343 |||||||||||||||||||| Sbjct: 639 cccgcaggtctactacagca 658
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 33365660 ttcttctgggaatacgtcgg 33365641 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 25001873 cctcgcctcgcctcgctgcc 25001854
>gb|AC102806.18| Mus musculus chromosome 3, clone RP23-341B15, complete sequence Length = 229984 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 173874 aaaggccagcctatcagaat 173893
>gb|AC121537.9| Mus musculus chromosome 8, clone RP24-394O10, complete sequence Length = 218348 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 150990 aaaggccagcctatcagaat 151009 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 134425 aaaggccagcctatcagaat 134444
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 122176 ttcttctgggaatacgtcgg 122157
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 118353 ttcttctgggaatacgtcgg 118372
>ref|XM_844382.1| PREDICTED: Canis familiaris similar to homeo box C5 (LOC607625), mRNA Length = 944 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 521 cgtgtcccggagcggccgcg 502
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 agaatactgtgagaagggtt 289 |||||||||||||||||||| Sbjct: 114233 agaatactgtgagaagggtt 114252
>ref|XM_753149.1| Ustilago maydis 521 hypothetical protein (UM02095.1) partial mRNA Length = 1320 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctcaaggactcggccaagg 139 |||||||||||||||||||| Sbjct: 129 gctcaaggactcggccaagg 148
>emb|CR847534.13| Zebrafish DNA sequence from clone DKEY-27E20 in linkage group 3, complete sequence Length = 211145 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 493 aagaggatcatggagaccttcttcgtccaccgcttc 528 ||||||||||||||||| || || ||||| |||||| Sbjct: 183690 aagaggatcatggagacattgtttgtccatcgcttc 183655
>gb|AY144706.1| Babesia odocoilei strain Holman beta-tubulin gene, partial cds Length = 917 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 aggatcatggagaccttcttcgtc 519 ||||||||||||||||||| |||| Sbjct: 391 aggatcatggagaccttctccgtc 414
>gb|AY144705.1| Babesia odocoilei strain Ips01Deer beta-tubulin gene, partial cds Length = 874 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 aggatcatggagaccttcttcgtc 519 ||||||||||||||||||| |||| Sbjct: 391 aggatcatggagaccttctccgtc 414
>ref|XM_447077.1| Candida glabrata CBS138, CAGL0H06479g partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ctactacagcacgctcttct 352 |||||||||||||||||||| Sbjct: 820 ctactacagcacgctcttct 801
>gb|AC124345.4| Mus musculus BAC clone RP24-459N19 from chromosome 15, complete sequence Length = 184532 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 20395 cgtgtcccggagcggccgcg 20414
>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence Length = 160137 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 agaatactgtgagaagggtt 289 |||||||||||||||||||| Sbjct: 107432 agaatactgtgagaagggtt 107413
>gb|AC131726.3| Mus musculus BAC clone RP23-132P9 from 3, complete sequence Length = 190554 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 135856 aaaggccagcctatcagaat 135875
>gb|AC123829.2| Mus musculus BAC clone RP24-117E16 from 2, complete sequence Length = 172335 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 51254 aaaggccagcctatcagaat 51235
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 176273 cctcgcctcgcctcgctgcc 176292
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 33680 cctcgcctcgcctcgctgcc 33661
>ref|XM_969972.1| PREDICTED: Tribolium castaneum similar to RWD domain-containing protein 2 (LOC663945), mRNA Length = 837 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aatctggaaagccagttgtc 246 |||||||||||||||||||| Sbjct: 25 aatctggaaagccagttgtc 44
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcttatcatctaccccatct 391 |||||||||||||||||||| Sbjct: 15111 tcttatcatctaccccatct 15092
>emb|X61755.1|HSHOX3D Human HOX3D gene for homeoprotein HOX3D Length = 4968 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 2607 cgtgtcccggagcggccgcg 2588
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ctactacagcacgctcttct 352 |||||||||||||||||||| Sbjct: 638594 ctactacagcacgctcttct 638575
>ref|NM_001016968.2| Xenopus tropicalis golgi associated, gamma adaptin ear containing, ARF binding protein 1 (gga1), mRNA Length = 2306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aggaggggagcatgaaggtc 72 |||||||||||||||||||| Sbjct: 2269 aggaggggagcatgaaggtc 2288
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 84708 ttcttctgggaatacgtcgg 84689
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 105062 ttcttctgggaatacgtcgg 105043
>emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on chromosome 11 Contains part of a novel gene and a CpG island, complete sequence Length = 218414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tggaaagccagttgtcctca 250 |||||||||||||||||||| Sbjct: 108674 tggaaagccagttgtcctca 108693
>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 167170 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctgcctcaagccccagcggcggga 46 |||||||| ||||||||||||||| Sbjct: 97237 ctgcctcaggccccagcggcggga 97260
>ref|XM_689353.1| PREDICTED: Danio rerio similar to Glycoprotein, synaptic 2 (LOC566085), mRNA Length = 1044 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 493 aagaggatcatggagaccttcttcgtccaccgcttc 528 ||||||||||||||||| || || ||||| |||||| Sbjct: 535 aagaggatcatggagacattgtttgtccatcgcttc 570
>gb|AC161253.2| Mus musculus BAC clone RP24-165J6 from chromosome 12, complete sequence Length = 156976 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 24851 aaaggccagcctatcagaat 24870
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 132451 ttcttctgggaatacgtcgg 132470
>gb|AC159654.8| Mus musculus 6 BAC RP23-234C22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231034 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 atcaaaaggccagcctatcagaat 274 |||||||||| ||||||||||||| Sbjct: 135414 atcaaaaggcaagcctatcagaat 135391
>gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221540 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 atcaaaaggccagcctatcagaat 274 |||||||||| ||||||||||||| Sbjct: 4123 atcaaaaggcaagcctatcagaat 4146
>dbj|AK078527.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820434E03 product:HOMEOBOX PROTEIN HOX-C5 (HOX-3D) (CP11) homolog [Homo sapiens], full insert sequence Length = 2732 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 328 cgtgtcccggagcggccgcg 309
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 27942209 ttcttctgggaatacgtcgg 27942190 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 26863648 ttcttctgggaatacgtcgg 26863629
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 3474563 ttcttctgggaatacgtcgg 3474582 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 2215433 ttcttctgggaatacgtcgg 2215452
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 21397165 ttcttctgggaatacgtcgg 21397184
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 33456170 ttcttctgggaatacgtcgg 33456151 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 25093190 cctcgcctcgcctcgctgcc 25093171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 27598894 ttcttctgggaatacgtcgg 27598913 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 20230334 ttcttctgggaatacgtcgg 20230315
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ggaggaggggagcatgaagg 70 |||||||||||||||||||| Sbjct: 94336 ggaggaggggagcatgaagg 94317
>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence Length = 203106 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 117157 cgtgtcccggagcggccgcg 117138
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 111928 cgtgtcccggagcggccgcg 111909
>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198488 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 1035 cgtgtcccggagcggccgcg 1016
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 170979 cgtgtcccggagcggccgcg 170960
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 180963 cgtgtcccggagcggccgcg 180944
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 93695 ttcttctgggaatacgtcgg 93714
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 78563 ttcttctgggaatacgtcgg 78582
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 103640 ttcttctgggaatacgtcgg 103621
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 13560 ttcttctgggaatacgtcgg 13579
>dbj|AK121360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123F07, full insert sequence Length = 2383 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 10 cctcgcctcgcctcgctgcc 29
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 107982 ttcttctgggaatacgtcgg 108001
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttctgggaatacgtcgg 368 |||||||||||||||||||| Sbjct: 30280 ttcttctgggaatacgtcgg 30299
>gb|AC155850.6| Mus musculus 6 BAC RP24-545D3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195675 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctgcctcaagccccagcggcggga 46 |||||||| ||||||||||||||| Sbjct: 182050 ctgcctcaggccccagcggcggga 182073
>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164242 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctgcctcaagccccagcggcggga 46 |||||||| ||||||||||||||| Sbjct: 34867 ctgcctcaggccccagcggcggga 34890
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgagctcaaggactcggcca 136 |||||||||||||||||||| Sbjct: 4256742 cgagctcaaggactcggcca 4256761
>gb|AC124395.5| Mus musculus BAC clone RP24-342J3 from 13, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 20845 cctcgcctcgcctcgctgcc 20864
>dbj|AK060995.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E03, full insert sequence Length = 1207 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 aggtcgtcaagggcggcgtcgagc 121 |||||||||||| ||||||||||| Sbjct: 197 aggtcgtcaaggccggcgtcgagc 220
>emb|CR848466.2| Xenopus tropicalis finished cDNA, clone TEgg087a14 Length = 2306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aggaggggagcatgaaggtc 72 |||||||||||||||||||| Sbjct: 2269 aggaggggagcatgaaggtc 2288
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcgtcaagggcggcgtcgag 120 |||||||||||||||||||| Sbjct: 3333195 tcgtcaagggcggcgtcgag 3333176
>dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-382M14, complete sequences Length = 190462 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 tctaccccatcttctattacctgc 403 |||||||||||||||||| ||||| Sbjct: 32036 tctaccccatcttctattgcctgc 32059
>ref|NM_175730.2| Mus musculus homeo box C5 (Hoxc5), mRNA Length = 2732 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 328 cgtgtcccggagcggccgcg 309
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 15636 cctcgcctcgcctcgctgcc 15655
>emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb0020J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133575 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 52106 cctcgcctcgcctcgctgcc 52087
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108805 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctcgcctcgcctcgctgcc 27 |||||||||||||||||||| Sbjct: 86091 cctcgcctcgcctcgctgcc 86110
>gb|AC141871.2| Mus musculus BAC clone RP24-394A13 from 8, complete sequence Length = 164114 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 110888 aaaggccagcctatcagaat 110869 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 94323 aaaggccagcctatcagaat 94304
>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence Length = 184181 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 181973 aaaggccagcctatcagaat 181992
>gb|U28071.1|MMU28071 Mus musculus homeobox protein (Hoxc-5) gene, complete cds Length = 4050 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 2493 cgtgtcccggagcggccgcg 2474
>gb|L43497.1|MUSFRH Mus musculus Hoxc-5 gene fragment Length = 4054 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgtgtcccggagcggccgcg 97 |||||||||||||||||||| Sbjct: 2493 cgtgtcccggagcggccgcg 2474
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaggccagcctatcagaat 274 |||||||||||||||||||| Sbjct: 15702 aaaggccagcctatcagaat 15683 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,369,031 Number of Sequences: 3902068 Number of extensions: 4369031 Number of successful extensions: 99915 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98511 Number of HSP's gapped (non-prelim): 1402 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
