| Clone Name | basd13b18 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 197 bits (500), Expect = 7e-51 Identities = 94/104 (90%), Positives = 97/104 (93%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXG 182 AL G+ARV MRKT AKAKQV+SSSP YG+DRVLYLGPLSGEPPSYLTGEFPGDYGWDT G Sbjct: 25 ALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAG 84 Query: 183 LSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 LSADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 85 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 194 bits (494), Expect = 4e-50 Identities = 95/105 (90%), Positives = 96/105 (91%), Gaps = 1/105 (0%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASS-SPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTX 179 ALFGEAR+TMRKT AK K ASS SP YGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT Sbjct: 23 ALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTA 82 Query: 180 GLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 GLSADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 83 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 127
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 194 bits (492), Expect = 6e-50 Identities = 95/105 (90%), Positives = 96/105 (91%), Gaps = 1/105 (0%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASS-SPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTX 179 +LFGEARVTMRKT AKAK ASS SP YG DRVLYLGPLSGEPPSYLTGEFPGDYGWDT Sbjct: 23 SLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTA 82 Query: 180 GLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 GLSADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 83 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 127
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 192 bits (487), Expect = 2e-49 Identities = 90/103 (87%), Positives = 93/103 (90%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 +FGE R+TMRK+ AK K AS SP YGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT GL Sbjct: 21 VFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 80 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 81 SADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 123
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 190 bits (482), Expect = 9e-49 Identities = 93/103 (90%), Positives = 94/103 (91%), Gaps = 1/103 (0%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASS-SPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 FGEARVTMRKT AKAK A+S SP YG DRVLYLGPLSGEPPSYLTGEFPGDYGWDT GL Sbjct: 25 FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 84 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 85 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 127
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 184 bits (467), Expect = 5e-47 Identities = 86/102 (84%), Positives = 88/102 (86%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 FGE R+TMRKT K K AS SP YG DRV YLGP SGEPPSYLTGEFPGDYGWDT GLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFAKNRELE IH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 124
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 181 bits (460), Expect = 3e-46 Identities = 86/103 (83%), Positives = 88/103 (85%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 + GE R+TMRKT K K V SSSP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GL Sbjct: 27 IIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGL 86 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 87 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 180 bits (456), Expect = 9e-46 Identities = 85/103 (82%), Positives = 88/103 (85%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 +FGE R+TMRKT AK K S SP YGADRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFAKNRELE IH RWA+ LGCVFPELLARNGVKFGE Sbjct: 84 SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGE 126
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 179 bits (455), Expect = 1e-45 Identities = 85/101 (84%), Positives = 88/101 (87%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT +KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 179 bits (455), Expect = 1e-45 Identities = 85/101 (84%), Positives = 88/101 (87%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT +KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 28 GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 87 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 88 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 179 bits (455), Expect = 1e-45 Identities = 87/102 (85%), Positives = 88/102 (86%), Gaps = 1/102 (0%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVAS-SSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 GEAR+TMRK T K AS SP YG DRVLYLGP SGEPPSYLTGEFPGDYGWDT GLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 140
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 179 bits (454), Expect = 2e-45 Identities = 88/102 (86%), Positives = 89/102 (87%), Gaps = 1/102 (0%) Frame = +3 Query: 12 GEARVTMRK-TTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 GEARVTMRK TT K AS+SP YG DRVLYLGP SGEPPSYLTGEFPGDYGWDT GLS Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPE FAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 95 ADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 136
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 179 bits (454), Expect = 2e-45 Identities = 85/101 (84%), Positives = 89/101 (88%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT +KAK V+SSSP YG +RV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +3 Query: 114 LSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLAR 293 ++GEP + +D GL+ DPE FA+ + E + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 294 NG 299 G Sbjct: 238 KG 239
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 179 bits (453), Expect = 2e-45 Identities = 85/101 (84%), Positives = 86/101 (85%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G RVTMRKT KAK +S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 178 bits (452), Expect = 3e-45 Identities = 85/101 (84%), Positives = 87/101 (86%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 28 GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 87 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 88 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +3 Query: 114 LSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLAR 293 ++GEP + +D GL+ DPE FA+ + E + R AM G L+ Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236 Query: 294 NG 299 G Sbjct: 237 KG 238
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 178 bits (451), Expect = 3e-45 Identities = 84/101 (83%), Positives = 87/101 (86%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT KAK ++S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 177 bits (450), Expect = 5e-45 Identities = 85/102 (83%), Positives = 88/102 (86%), Gaps = 1/102 (0%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVAS-SSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 GEAR+TMRK T + AS SP YG DRV+YLGP SGEPPSYLTGEFPGDYGWDT GLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 140
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 176 bits (446), Expect = 1e-44 Identities = 83/101 (82%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G + TMRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPEL ARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGE 129
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 176 bits (446), Expect = 1e-44 Identities = 83/101 (82%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G + TMRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 28 GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 87 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPEL ARNGVKFGE Sbjct: 88 DPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGE 128
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 175 bits (444), Expect = 2e-44 Identities = 83/101 (82%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G + MRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 175 bits (443), Expect = 3e-44 Identities = 82/101 (81%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G +VTMRKT KAK +SSSP YG DRV YLGP SGE PSYLTGEFP DYGWDT GLSA Sbjct: 29 GNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPEL ARNG+KFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGE 129
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 174 bits (442), Expect = 4e-44 Identities = 83/101 (82%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G + TMRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT LSA Sbjct: 29 GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSA 88 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 174 bits (442), Expect = 4e-44 Identities = 86/101 (85%), Positives = 87/101 (86%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G RV+MRKT AK VASSSP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 86 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 127
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 174 bits (441), Expect = 5e-44 Identities = 84/101 (83%), Positives = 87/101 (86%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G RV+MRKT +K V+S SP YG DRV YLGP SGEPPSYLTGEFPGDYGWDT GLSA Sbjct: 9 GVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 66 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 67 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 107
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 174 bits (441), Expect = 5e-44 Identities = 83/101 (82%), Positives = 88/101 (87%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G A+ TMRKT +K+ V+S SP YG DRV YLGP SGEPPSYLTGEFPGDYGWDT GLSA Sbjct: 19 GNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 76 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 77 DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 117
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 173 bits (439), Expect = 9e-44 Identities = 84/103 (81%), Positives = 87/103 (84%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 + G RVTMRKT AK K S SP YG+DRV YLGP SGE PSYLTGEFPGDYGWDT GL Sbjct: 27 VLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGL 85 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFA+NRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 86 SADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 128
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 173 bits (439), Expect = 9e-44 Identities = 84/103 (81%), Positives = 87/103 (84%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 + G RVTMRKT AK K S SP YG+DRV YLGP SGE PSYLTGEFPGDYGWDT GL Sbjct: 27 VLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGL 85 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFA+NRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 86 SADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 128
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 173 bits (438), Expect = 1e-43 Identities = 83/98 (84%), Positives = 86/98 (87%) Frame = +3 Query: 21 RVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE 200 RV+MRKT K QV+S SP YG DRV YLGP SGEPPSYLTGEFPGDYGWDT GLSADPE Sbjct: 30 RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 201 TFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 TFAKNRELE IH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 88 TFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 125
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 172 bits (435), Expect = 2e-43 Identities = 84/103 (81%), Positives = 85/103 (82%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 LFG RV+MRKT K S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GL Sbjct: 27 LFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGL 83 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 84 SADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 126
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 171 bits (434), Expect = 3e-43 Identities = 83/103 (80%), Positives = 86/103 (83%) Frame = +3 Query: 6 LFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL 185 +FG RVTMRKT S SP YG+DRV YLGP SGEPPSYLTGEFPGDYGWDT GL Sbjct: 27 VFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGL 84 Query: 186 SADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 SADPETFA+NRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 85 SADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 127
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 171 bits (434), Expect = 3e-43 Identities = 84/101 (83%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G R+TMRK A AK SSSP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 86 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 127
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 170 bits (431), Expect = 7e-43 Identities = 80/101 (79%), Positives = 84/101 (83%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G AR TMRK+ K +S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 31 GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 90 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETF+KNRELE IH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 91 DPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 131
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 170 bits (430), Expect = 9e-43 Identities = 80/98 (81%), Positives = 83/98 (84%) Frame = +3 Query: 21 RVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE 200 +VTMRKT KAK V+S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSADP Sbjct: 31 KVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPA 90 Query: 201 TFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 TFAKNR+LE IH RW MLGALGCVFPEL ARNGVKFGE Sbjct: 91 TFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGE 128
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 170 bits (430), Expect = 9e-43 Identities = 80/101 (79%), Positives = 84/101 (83%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G AR TMRK+ K +S SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 30 GGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 89 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETF+KNRELE IH RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 90 DPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 130
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 169 bits (429), Expect = 1e-42 Identities = 83/101 (82%), Positives = 85/101 (84%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G+ARV+MRKT A K SP YG DRV YLGP SGE PSYLTGEFPGDYGWDT GLSA Sbjct: 29 GDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 85 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 86 DPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGE 126
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 158 bits (400), Expect = 3e-39 Identities = 78/101 (77%), Positives = 82/101 (81%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 GEARV M +KA S S YG+DR LYLGP SG PPSYL+GEFPGDYGWDT GLSA Sbjct: 30 GEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSA 86 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCV PELLA+NGVKFGE Sbjct: 87 DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGE 127
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 157 bits (396), Expect = 8e-39 Identities = 75/102 (73%), Positives = 82/102 (80%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 FGE R+TMR+T A Q S YG DR YLGP S + PSYLTGEFPGDYGWDT GLS Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFA+NRELE IH RWAMLGALGCVFPE+L++NGVKFGE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGE 127
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 156 bits (394), Expect = 1e-38 Identities = 73/87 (83%), Positives = 76/87 (87%) Frame = +3 Query: 54 KQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXI 233 K +SSSP +G D V YLGP SGE PSYLTGEFPGDYGWDT GLSADPETFAKNRELE I Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 234 HXRWAMLGALGCVFPELLARNGVKFGE 314 H RWAMLGALGCVFPELL+RNGVKFGE Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGE 90
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 153 bits (386), Expect = 1e-37 Identities = 74/102 (72%), Positives = 80/102 (78%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 FG+AR TMR+T A + S YG DR YLGP S + PSYLTGEFPGDYGWDT GLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFA+NRELE IH RWAMLGALGC FPELL +NGVKFGE Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGE 127
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 151 bits (381), Expect = 5e-37 Identities = 72/98 (73%), Positives = 79/98 (80%) Frame = +3 Query: 21 RVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE 200 R+TMR+T A Q S YG DR YLGP S + PSYLTGEFPGDYGWDT GLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 201 TFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 TFA+NRELE IH RWAMLGALGCVFPE+L++NGVKFGE Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGE 125 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG +D GL+ DP+TFA+ + E + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 150 bits (380), Expect = 6e-37 Identities = 74/98 (75%), Positives = 79/98 (80%) Frame = +3 Query: 21 RVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE 200 RV+MR+T A + S YG DR YLGP S + PSYLTGEFPGDYGWDT GLSADPE Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 201 TFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 TFAKNRELE IH RWAMLGALGCVFPELLA+NGVKFGE Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGE 126
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 150 bits (380), Expect = 6e-37 Identities = 73/102 (71%), Positives = 79/102 (77%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 FG R TMR+T A Q S YG DR YLGP S + PSYLTGEFPGDYGWDT GLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFA+NRELE IH RWAMLGALGCVFPE+L++NGV FGE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGE 127
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 150 bits (380), Expect = 6e-37 Identities = 73/102 (71%), Positives = 79/102 (77%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 F R TMR+T A Q S YG DR YLGP S + PSYLTGEFPGDYGWDT GLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFA+NRELE IH RWAMLGALGCVFPE+L++NGVKFGE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGE 127
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 150 bits (379), Expect = 8e-37 Identities = 72/100 (72%), Positives = 82/100 (82%) Frame = +3 Query: 15 EARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSAD 194 EARVTMR+T +K+ S + YGADR +LGP SGE PSYL GEF GDYGWDT GLS+D Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 90 Query: 195 PETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 PETFA+NRELE IH RWAMLGALGC+ PELLA++GVKFGE Sbjct: 91 PETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGE 130 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG +D GL+ DP+TFA+ + E + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 150 bits (378), Expect = 1e-36 Identities = 73/101 (72%), Positives = 80/101 (79%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G RV+MR+T A +S YG DR YLGP S + PSYLTGEFPGDYGWDT GLSA Sbjct: 31 GGGRVSMRRTVKSAP----TSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPE+L++NGVKFGE Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGE 127
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 149 bits (376), Expect = 2e-36 Identities = 73/102 (71%), Positives = 79/102 (77%) Frame = +3 Query: 9 FGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 F RVTMR+T A Q S YG DR YLGP S + PSYLTGEFPGDYGWDT GLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 189 ADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ADPETFA+NRELE IH RWAMLGALGCVFPE+L++NGV FGE Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGE 99
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 148 bits (374), Expect = 3e-36 Identities = 72/100 (72%), Positives = 79/100 (79%) Frame = +3 Query: 15 EARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSAD 194 +AR+TMR+T A + S YG DR YLGP S PSYLTGEFPGDYGWDT +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 195 PETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 PETFAKNRELE IH RWAMLGALGCVFPELLA+NG+KFGE Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGE 128
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 147 bits (371), Expect = 7e-36 Identities = 70/100 (70%), Positives = 79/100 (79%) Frame = +3 Query: 15 EARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSAD 194 + R +MR+T Q S YGADR +LGP S + PSYLTGEFPGDYGWDT GLSAD Sbjct: 31 DGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86 Query: 195 PETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 PETFAKNRELE IH RWAMLGALGC+FPELL++NGV+FGE Sbjct: 87 PETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGE 126
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 142 bits (357), Expect = 3e-34 Identities = 75/101 (74%), Positives = 77/101 (76%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSA 191 G RV+MRKT K V+S SP YG DRV YLGP SGE PSYLTGEF GLSA Sbjct: 28 GVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF--------HGLSA 77 Query: 192 DPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 DPETFAKNRELE IH RWAMLGALGCVFPELLARNGVKFGE Sbjct: 78 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 118
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 137 bits (345), Expect = 7e-33 Identities = 62/68 (91%), Positives = 63/68 (92%) Frame = +3 Query: 111 PLSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLA 290 P SGEPPSYLTGEFPGDYGWDT GLSADPETFAKNRELE IH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 291 RNGVKFGE 314 RNGVKFGE Sbjct: 61 RNGVKFGE 68
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 129 bits (323), Expect = 2e-30 Identities = 67/106 (63%), Positives = 75/106 (70%), Gaps = 2/106 (1%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASSS-PXYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 176 AL + T +KT AKA SS YG +R +LGP S P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 177 XGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 GLSADPETF + RELE IH RWAMLGALGC PELLA++G KFGE Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGE 115 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG+ +D GL+ DP+TFA+ + E + R A G ++ G Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 125 bits (315), Expect = 2e-29 Identities = 59/79 (74%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = +3 Query: 81 YGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGA 260 YG DRV YLGP S + PSYL GEFPGDYGWDT GLSADPE FA+NR LE IH RWAMLGA Sbjct: 51 YGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGA 110 Query: 261 LGCVFPELLAR-NGVKFGE 314 LGCVFPE+L + GV+F E Sbjct: 111 LGCVFPEVLQKWVGVEFKE 129 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG +D GL+ DP TFA+ + E + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 125 bits (314), Expect = 3e-29 Identities = 57/81 (70%), Positives = 63/81 (77%) Frame = +3 Query: 51 AKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEX 230 A+ S+ YG DRV YLGP S + PSYL GEFPGDYGWDT GLSADPE FAKNR LE Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97 Query: 231 IHXRWAMLGALGCVFPELLAR 293 IH RWAMLGALGC+FPE+L + Sbjct: 98 IHGRWAMLGALGCIFPEVLEK 118 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG +D GL+ DP TFA+ + E + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 124 bits (311), Expect = 6e-29 Identities = 66/99 (66%), Positives = 71/99 (71%) Frame = +3 Query: 18 ARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADP 197 A TM K AK+K +S+ RV YLGP SGE PSYLTGEFPGDYGWDT GLSA P Sbjct: 37 AGFTMLKHAAKSKVSSSTCDR----RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYP 92 Query: 198 ETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFGE 314 ETFAKNRELE IH R AM ALGC+FPELL+ G FGE Sbjct: 93 ETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGE 131
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 120 bits (301), Expect = 9e-28 Identities = 60/94 (63%), Positives = 67/94 (71%), Gaps = 1/94 (1%) Frame = +3 Query: 36 KTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPETFAKN 215 K T A ++ YG DR +LGP S P+YLTGEFPGDYGWDT GLSADPETF K Sbjct: 25 KQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKY 84 Query: 216 RELEXIHXRWAMLGALGCVFPELLAR-NGVKFGE 314 RELE IH RWA+LGALG + PELL+ GVKFGE Sbjct: 85 RELEVIHARWALLGALGILTPELLSTYAGVKFGE 118 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG+ +D GL+ DP+TFA+ + E + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 114 bits (284), Expect = 8e-26 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = +3 Query: 81 YGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLG 257 YG DR +LGP S + P YLTGEFPGDYGWDT GLSADP+TFA+ RE+E IH RWA+LG Sbjct: 34 YGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLG 93 Query: 258 ALGCVFPELLAR-NGVKFGE 314 ALG + PELL++ GV+FGE Sbjct: 94 ALGILTPELLSQYAGVQFGE 113 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG +D GL+ DP+TFA+ + E + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 96.3 bits (238), Expect = 2e-20 Identities = 52/97 (53%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Frame = +3 Query: 27 TMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPETF 206 T + A +K +S++ YG D L + P TGEFPGDYGWDT GLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 207 AKNRELEXIHXRWAMLGALGCVFPELLA-RNGVKFGE 314 + RELE IH R +LGALG V PELLA +G+KFG+ Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGD 135 Score = 31.6 bits (70), Expect = 0.53 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 150 FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNG 299 +PG+ +D GL+ DP+TFA+ + E + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 81.3 bits (199), Expect = 6e-16 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 3/106 (2%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASSSPXYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 173 ALF + + K+ A ++ + YG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 174 TXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKFG 311 GL PE FAK + E IH RWAMLGA G + PE L + G G Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCG 142
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 76.6 bits (187), Expect = 1e-14 Identities = 38/94 (40%), Positives = 53/94 (56%) Frame = +3 Query: 21 RVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE 200 RV+ TT A+ + DR L+ PP +L G PGD+G+D GL++DPE Sbjct: 41 RVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPE 98 Query: 201 TFAKNRELEXIHXRWAMLGALGCVFPELLARNGV 302 + N++ E +H RWAMLGA G PELL + G+ Sbjct: 99 SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI 132
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 73.9 bits (180), Expect = 9e-14 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Frame = +3 Query: 3 ALFGEARVTMRKTTAK--AKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 176 + G R+ + K A ++ VA S+ DR L+ PP +L G PGD+G+D Sbjct: 33 SFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDP 90 Query: 177 XGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGV 302 GL +DPE+ N + E +H RWAMLGA G PE L + GV Sbjct: 91 LGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV 132
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/59 (49%), Positives = 40/59 (67%) Frame = +3 Query: 117 SGEPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLAR 293 + EPP+ LTGE+P D G+D L+ADP+ +A+ R E H R AML +GC+ PELL + Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251 Score = 63.2 bits (152), Expect = 2e-10 Identities = 32/61 (52%), Positives = 39/61 (63%) Frame = +3 Query: 126 PPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVK 305 PP YLTGE GD G+D GL+ADP TF + + E H R +ML +GC+ PELL NG Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAW 438 Query: 306 F 308 F Sbjct: 439 F 439 Score = 57.8 bits (138), Expect = 7e-09 Identities = 26/55 (47%), Positives = 36/55 (65%) Frame = +3 Query: 129 PSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLAR 293 PS+L GE+ GD G+D GL+ADP+TF + R E H R AML +G + P+ L + Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 60.1 bits (144), Expect = 1e-09 Identities = 25/57 (43%), Positives = 38/57 (66%) Frame = +3 Query: 123 EPPSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLAR 293 +PP++LTGE+P D G+D ++ADP +A+ R E H R +ML +G + PELL + Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223 Score = 35.0 bits (79), Expect = 0.048 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +3 Query: 195 PETFAKNRELEXIHXRWAMLGALGCVFPELLARNGVKF 308 P + + R E + R AML +GCV+PELL NGV F Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGVWF 37
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 59.3 bits (142), Expect = 2e-09 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 114 LSGEP-PSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELL 287 + G+P PSYL G PGD+G+D+ GL P + +E E IH RWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/58 (43%), Positives = 34/58 (58%) Frame = +3 Query: 129 PSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALGCVFPELLARNGV 302 P YLTG GD G+D GL+ DPE + E ++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 54.3 bits (129), Expect = 8e-08 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 6/96 (6%) Frame = +3 Query: 33 RKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPET--- 203 RK + + ++ GA+R L+ S + SYL G PGD+G+D GLS DPE Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89 Query: 204 FAKNREL---EXIHXRWAMLGALGCVFPELLARNGV 302 F + + L E I+ R+AMLGA G + PE+L + G+ Sbjct: 90 FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGL 125
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = +3 Query: 129 PSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALG 266 P +L G PGD+G+D GL DP RE E IH RWAML LG Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 53.5 bits (127), Expect = 1e-07 Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Frame = +3 Query: 3 ALFGEARVTMRKTTAKAKQVASSSPXYGADRVLYLGPLSGE----PPSYLTGEFPGDYGW 170 AL G A VT R TT K VA+++ A + ++ + P +L G PGD+G+ Sbjct: 26 ALLG-AHVTARVTTPKRFVVAAAAV---APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGF 81 Query: 171 DTXGLSADPETFAKNRELEXIHXRWAMLGALG 266 D GL DP RE E IH RWAM LG Sbjct: 82 DPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/46 (52%), Positives = 26/46 (56%) Frame = +3 Query: 129 PSYLTGEFPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALG 266 P +L G PGDYG+D GL DP RE E IH RWAM LG Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 38.9 bits (89), Expect = 0.003 Identities = 36/130 (27%), Positives = 42/130 (32%), Gaps = 43/130 (33%) Frame = +3 Query: 27 TMRKTTAKAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE-- 200 T + + KAK V S P + + P YL G GDYG+D GL E Sbjct: 37 TKKASPKKAKTVISDRPLWFP---------GAKSPEYLDGSLVGDYGFDPFGLGKPAEYL 87 Query: 201 ---------TFAKN--------------------------------RELEXIHXRWAMLG 257 AKN RE E IH RWAML Sbjct: 88 QFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLA 147 Query: 258 ALGCVFPELL 287 LG + E L Sbjct: 148 TLGAITVEWL 157 Score = 32.0 bits (71), Expect = 0.40 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +3 Query: 96 VLYLGPLSGEPPSYLTGE---FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALG 266 VL +G + + + L E +PG +D GL++DP A+ + E H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 38.1 bits (87), Expect = 0.006 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +3 Query: 105 LGPLSGEPPSYLT-GEFPGDYGWDTXGLS-ADPETFAKNRELEXIHXRWAMLGALGCVFP 278 + P +G+ S L G PGD G+D GL+ +DP+ F +E E H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 279 ELLA 290 E ++ Sbjct: 192 EAVS 195
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 36.2 bits (82), Expect = 0.021 Identities = 37/124 (29%), Positives = 42/124 (33%), Gaps = 44/124 (35%) Frame = +3 Query: 48 KAKQVASSSPXYGADRVL-YLGPLSGEPPSYLTGEFPGDYGWDTXGLSADPE-------- 200 KA S+ DR L Y G +S P +L G GDYG+D GL E Sbjct: 40 KAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDS 96 Query: 201 ---TFAKN--------------------------------RELEXIHXRWAMLGALGCVF 275 AKN RE E IH RWAML LG + Sbjct: 97 LDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALS 156 Query: 276 PELL 287 E L Sbjct: 157 VEWL 160 Score = 33.9 bits (76), Expect = 0.11 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +3 Query: 96 VLYLGPLSGEPPSYLTGE---FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGALG 266 VL +G + + + L E +PG +D GL+ADPE A+ + E H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 35.8 bits (81), Expect = 0.028 Identities = 29/97 (29%), Positives = 32/97 (32%), Gaps = 43/97 (44%) Frame = +3 Query: 126 PPSYLTGEFPGDYGWDTXGLSADPE-----------TFAKN------------------- 215 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 216 -------------RELEXIHXRWAMLGALGCVFPELL 287 RE E IH RWAMLG LG + E L Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +3 Query: 96 VLYLGPLSGEPPSYLTGE---FPGDYGWDTXGLSADPETFAKNRELEXIHXRWAMLGAL 263 VL +G + + S L E +PG Y +D GL+ADPE + E H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 35.0 bits (79), Expect = 0.048 Identities = 39/142 (27%), Positives = 46/142 (32%), Gaps = 49/142 (34%) Frame = +3 Query: 36 KTTAKAKQVASSSPXYGADRVLYLGPLSGEP----PSYLTGEFPGDYGWDTXGLSADPE- 200 K T K ++ + G Y G P P +L G PGD G+D GLS E Sbjct: 24 KATTKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEF 83 Query: 201 ----------TFAKN----------------------------------RELEXIHXRWA 248 AKN RE E IH RWA Sbjct: 84 VVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWA 143 Query: 249 MLGALGCVFPELLARNGVKFGE 314 ML LG + E A GV + E Sbjct: 144 MLACLGALVAE--ATTGVSWVE 163
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast| precursor (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSP 77 G R+TMRKT AK K +S SP Sbjct: 29 GNGRITMRKTAAKPKPASSGSP 50
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast| precursor (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSSP 77 G R+TMRKT AK K +S SP Sbjct: 29 GNGRITMRKTAAKPKPASSGSP 50
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 2.0 Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Frame = +3 Query: 24 VTMRKTTAKAKQVASSSPXYG--ADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLSADP 197 V+ KT + K V S+S A+ YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASAESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAATA 83 Query: 198 ET--FAKNRELEXIHXRWAMLGALGCVFPELL 287 + RE E H R AML ALG V E L Sbjct: 84 TVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +3 Query: 60 VASSSPXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGL--SADPETFAKNRELEXI 233 +A+S+ A ++ + + +PP WD GL AD E F + R +E Sbjct: 22 LATSAKSSSAMKMSFESEIGAQPPIGF---------WDPLGLVADADQERFDRLRYVEIK 72 Query: 234 HXRWAMLGALG 266 H R AML +G Sbjct: 73 HGRIAMLAVVG 83
>SEM6B_RAT (O70141) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)| Length = 887 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = -1 Query: 313 SPNLTPLRASNSGKTHPRAPSMAHRQWIXSSSRFFAKVSGSAESPXVSHP*SPGNSPVK* 134 +P TPL THP A ++ R W S S S ++H +P PV Sbjct: 710 TPEQTPLPQKRLPTTHPHAHALGPRAW--DHSHALLSASASTSLLLLAHTRAPEQPPV-- 765 Query: 133 LGGSPDSGP 107 +SGP Sbjct: 766 ---PTESGP 771
>ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64)| Length = 643 Score = 28.1 bits (61), Expect = 5.8 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 13/106 (12%) Frame = +1 Query: 31 CARLRXRQSKL---LRAARGTVPIACSTSXHYQVSRRAI*----------PVSSPVTMGG 171 C + R+ KL +R G P C T + ++ P + Sbjct: 178 CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYA 237 Query: 172 TPXDSQLTLRPSQRTASWRXSIXDGPCLVPSDVSSLSCSPAMALSL 309 + SQLT+ TAS + P +P++ S +PA+ LSL Sbjct: 238 SRNSSQLTVHLRSHTASVLENDVQKPAGLPAEESDAQQAPAVTLSL 283
>EMBP1_WHEAT (P25032) DNA-binding protein EMBP-1 (Histone promoter-binding| protein 1a(1)) (HBP-1a(1)) Length = 354 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = -1 Query: 289 ASNSGKTHPRA-----PSMAHRQWIXSSSRFFAKVSGSAESPXVSHP*SP 155 ++ SG P A P+ AH +W S ++A + +A P + P P Sbjct: 6 SATSGDDRPPAAGGGTPAQAHAEWAASMHAYYAAAASAAGHPYAAWPLPP 55
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 27.7 bits (60), Expect = 7.6 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 12 GEARVTMRKTTAKAKQVASSS-PXYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTXGLS 188 G A +R T + + S+ P +G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 189 ADPETFAKNRELEXIHXR 242 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +3 Query: 168 WDTXGL--SADPETFAKNRELEXIHXRWAMLGALG 266 WD GL AD E F + R +E H R AML G Sbjct: 48 WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 82
>NPRE_PAEPO (P29148) Bacillolysin precursor (EC 3.4.24.28) (Neutral protease)| Length = 590 Score = 27.7 bits (60), Expect = 7.6 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 48 KAKQVASSSPXYGADRVLYLGPLSGEPPSYL 140 + KQ + P YGA++ +++G SGE SYL Sbjct: 94 RLKQYVNGIPVYGAEQTIHVGK-SGEVTSYL 123
>ABFB_STRLI (P96463) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 114 LSGEPPSYLTGEFPGDYGWDTXGLSADPET 203 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>ABFB_STRCO (O54161) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 114 LSGEPPSYLTGEFPGDYGWDTXGLSADPET 203 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +3 Query: 168 WDTXGL--SADPETFAKNRELEXIHXRWAMLGALG 266 WD GL AD E F + R +E H R AML G Sbjct: 19 WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 53
>GR22C_DROME (P58952) Putative gustatory receptor 22c| Length = 383 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 Query: 195 PETFAKNRELEXIHXRWAMLGALGCV 272 PE FA+N LE H ML CV Sbjct: 73 PEAFARNSVLENTHYTTGMLAVFSCV 98
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +3 Query: 168 WDTXGL--SADPETFAKNRELEXIHXRWAMLGALG 266 WD GL AD E F + R +E H R AML G Sbjct: 54 WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 88
>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) (Lysosomal pepstatin insensitive protease) (LPIC) Length = 563 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -1 Query: 316 ASPNLTPLRASN-SGKTHPRAPSMAHRQWIXSSSRFFAKVSGSAESPXV 173 +SP+L P N SG+ +P +++ W+ S+S VSG++ S V Sbjct: 432 SSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480
>TRC4_ECOLI (P27189) DNA primase traC (EC 2.7.7.-) (Replication primase)| Length = 1061 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Frame = +3 Query: 48 KAKQVASSSPXYGADRVLYLGPLSGEPPSYLTGEFPG-DYGWDTXGLSADPETFAK 212 K ++ + G Y+G L G P Y+ G + W G + DP AK Sbjct: 683 KKHRIETEGDKKGEKSGFYVGHLDGHPAGYIKNNRTGVEMKWKAKGYALDPAEKAK 738
>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)| Length = 1186 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = -2 Query: 291 GRATQGRHIRGHQAWPIXNGSPPARGSLRRSQGQLRVXRCPTHSHRGTHRSNS 133 G +T G + RGH GS S +S G T+ + +HR S Sbjct: 577 GSSTSGSNARGHLGTVSSTGSTSNTDSSSKSAGSRTSGGSSTYGYSSSHRGGS 629 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,155,803 Number of Sequences: 219361 Number of extensions: 841617 Number of successful extensions: 2372 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 2292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2352 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)