>CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-)|
           (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase)
          Length = 452

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
 Frame = +3

Query: 270 TSTQKRG---SRSELRSTASSPSKR-SKTLDDMPRTHGKTRGPFVKYMKD---IETKLEK 428
           TS QK+     RSE+ S   S  K  +K  D+  +  GK +    K ++    IE K EK
Sbjct: 32  TSQQKQEIQQKRSEVNSGIESKRKEIAKLQDEQKKLEGKIQELDKKALETSNKIEDK-EK 90

Query: 429 ESEKTDSILQALVNQGNEKVRRSEERAQSVKNCQNLAIECGASE 560
           E++KT   ++AL  +  E  +R EER++ +KN      E G S+
Sbjct: 91  ENKKTKKEVEALKKEIKETEKRIEERSKVIKNRVRSLQENGGSQ 134

>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)|
           (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4
           kinase)
          Length = 1007

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
 Frame = +3

Query: 291 SRSELRSTASSPSKRSKTLDDMPRTH------------GKTRGPFVKYMKDIETKLEKES 434
           S+S+ R  + SPSKRSK+ D   ++             GK R P      D + K+E +S
Sbjct: 215 SKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSP-----TDDKVKIEDKS 269

Query: 435 EKTDSILQALVNQGNEKVRRSEERA 509
           +  D     ++N+   + R  + R+
Sbjct: 270 KSKDRKKSPIINESRSRDRGKKSRS 294

>HISX_NEIMA (Q9JTH9) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 429

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = +3

Query: 252 VPSPMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKE 431
           + + +    QKRG  + +  T       +K++DD+  T    +  F +   D++T L+  
Sbjct: 32  IVADICADVQKRGDAALIEYTNKFDQTNAKSIDDLILTQADLKAAFERIPNDVQTALQTA 91

Query: 432 SEKTDSILQ 458
           + + +S  Q
Sbjct: 92  ARRVESYHQ 100

>KAD6_PYRAB (Q9UZK4) Putative adenylate kinase (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 180

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = +3

Query: 12  ETGCGRDSDGEVTATAD----WWEKEIKDR 89
           E GCGR+ DGEV    D    + EKE+KDR
Sbjct: 37  EKGCGREVDGEVEVEIDELAYFVEKELKDR 66

>OPTN_MOUSE (Q8K3K8) Optineurin|
          Length = 584

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 279 QKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSILQ 458
           Q    RSE++   +   +    L  +  TH K      K +K IE   ++++EK D +  
Sbjct: 367 QVESMRSEIKMEQAKTEEEKSRLATLQATHNKLLQEHNKALKTIEELTKQQAEKVDKM-- 424

Query: 459 ALVNQGNEKVRRSEERAQS 515
            L+ + +EK+  +E+   S
Sbjct: 425 -LLQELSEKLELAEQALAS 442

>HISX_NEIMB (Q9JYH8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 429

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = +3

Query: 252 VPSPMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKE 431
           + + +    QKRG  + +  T       +K++DD+  T       F +   D++T L+  
Sbjct: 32  IVADICADVQKRGDAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTA 91

Query: 432 SEKTDSILQ 458
           + + +S  Q
Sbjct: 92  ARRVESYHQ 100

>HISX_NEIG1 (Q5F7D8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 429

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = +3

Query: 252 VPSPMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKE 431
           + + +    QKRG  + +  T       +K++DD+  T       F +   D++T L+  
Sbjct: 32  IVADICADVQKRGDAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTA 91

Query: 432 SEKTDSILQ 458
           + + +S  Q
Sbjct: 92  ARRVESYHQ 100

>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding|
           protein 19)
          Length = 1895

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +3

Query: 285 RGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSILQAL 464
           +G++       +  +KR  T+D      G T G  + Y+K ++ K E +SEK D+ L+ L
Sbjct: 275 KGAKGSKMFCKACITKRPLTIDGGGNMGGVTTGDALNYLKAVKDKFE-DSEKYDTFLEVL 333

>OPTN_PIG (Q7YS99) Optineurin|
          Length = 574

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/79 (24%), Positives = 35/79 (44%)
 Frame = +3

Query: 279 QKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSILQ 458
           Q    RSE++   +   +    L  +  TH +    +   +K IE    +ESEK D +  
Sbjct: 358 QVESMRSEIKMEQAKTEEEKSKLTTLQLTHNRLLQEYNNALKTIEELKRRESEKVDKV-- 415

Query: 459 ALVNQGNEKVRRSEERAQS 515
            ++ + N K+  +E+   S
Sbjct: 416 -VLQELNGKLEMAEKALAS 433

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
            (dDOT1L)
          Length = 1848

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 252  QSLHCHPGHHHYLTPNNLLSQEHKQMNHPQRPH 154
            Q  H H  HHH+  P + L Q H Q  HP + H
Sbjct: 1233 QQQHQHHHHHHHHHPQHRLPQ-HVQHQHPHQHH 1264

>Y4095_ARATH (Q9M160) Protein At4g00950|
          Length = 291

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 255 PSPMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTH 368
           P   STS+    S S L S +SSP +  K+L+  PR H
Sbjct: 55  PKQHSTSSSSSSSSSPLTSYSSSPFETHKSLELPPRLH 92

>CAND_DROME (P27398) Calpain D (EC 3.4.22.-) (Calcium-activated neutral|
           proteinase D) (CANP D) (Small optic lobes protein)
          Length = 1594

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 243 HCHPGHHHYLTPNNLLSQEHKQMNHPQRPHEISHVTGAYTQG 118
           H HP HHH+   +  L ++H+   H Q  H+  H+ G    G
Sbjct: 195 HSHPHHHHHYL-HQELEEQHQHQLHSQHLHK-RHLKGRSASG 234

>SPD5_CAEEL (P91349) Spindle-defective protein 5|
          Length = 1198

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 390 VKYMKDIETKLEKESEKTDSILQALVNQGNEKVRRSEERAQSVKN 524
           + Y+ D+ETKL    ++ D   QALV   N+  +   E    VKN
Sbjct: 289 LNYIDDLETKLADAKKENDKARQALVEYMNKCSKLEHEIRTMVKN 333

>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)|
           (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA
           protein kinase)
          Length = 1007

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
 Frame = +3

Query: 291 SRSELRSTASSPSKRSKTLDDMPRTH------------GKTRGPFVKYMKDIETKLEKES 434
           S+S+ R  + SPSKRSK+ D   ++             GK R P  + MK  E    K+ 
Sbjct: 216 SKSKERRKSKSPSKRSKSQDQARKSKSPPLRRRSQEKVGKARSPAEEKMKSEEKGKIKDR 275

Query: 435 EKTDSILQALVNQGNEKVRRSEERAQS 515
           +K+  +        NE+ R   ++++S
Sbjct: 276 KKSPIV--------NERSRDRSKKSKS 294

>AMY2_SCHPO (O42918) Probable alpha-amylase meu7 precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase) (Meiotic
           expression up-regulated protein 7)
          Length = 774

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -1

Query: 258 WVQSLHCHPGHHHYLTPNNLLSQEHKQMNHPQRPH 154
           W    HCH G      P+N+   +HK   H +  H
Sbjct: 364 WKHEEHCHHGKFLRPVPHNVTKPDHKPWKHEEHCH 398

>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)|
          Length = 261

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = +3

Query: 273 STQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSI 452
           ST  R SR+  R+  S    RSK+L    ++ GK++    +      TK       +DSI
Sbjct: 161 STSARQSRTPRRNFGSRGRSRSKSLQKRSKSIGKSQSSSPQKQTSSGTKSRSHGRHSDSI 220

Query: 453 LQALVNQGNEKVRRSEERAQSVKN 524
            ++   +  +    SE + Q+ K+
Sbjct: 221 ARSPC-KSPKGYTNSETKVQTAKH 243

>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = +3

Query: 327 SKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKT-----DSILQALVNQGNEKVR 491
           S+R K+LD+M +   + R    K MKD + KLE E E        ++L+  + +  E++R
Sbjct: 491 SQRWKSLDEMEK---QQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELR 547

Query: 492 RSEE 503
           R EE
Sbjct: 548 RMEE 551

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = +3

Query: 327 SKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKT-----DSILQALVNQGNEKVR 491
           S+R K+LD+M +   + R    K MKD + KLE E E        ++L+  + +  E++R
Sbjct: 483 SQRWKSLDEMEK---QQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELR 539

Query: 492 RSEE 503
           R EE
Sbjct: 540 RMEE 543

>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,|
            nonerythroid)
          Length = 3924

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +3

Query: 252  VPSP---MSTSTQKRGSRSELRSTASSPSKRSKTLD-DMPRTHGKTRGPFVKYMKDIETK 419
            VP P   + T   K G + E  +   S  K  K +  D  ++  K   P +   K +  K
Sbjct: 1615 VPLPKEQLQTVQDKAGKKCEALAVGRSSEKEGKDIPPDETQSTQKQHKPSLGIKKPVRRK 1674

Query: 420  LEKESEKTDSILQALVNQGNEKVRRSEE 503
            L+++ ++ +  LQA   +   K   SEE
Sbjct: 1675 LKEKQKQKEEGLQASAEKAELKKGSSEE 1702

>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)|
          Length = 1851

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
 Frame = +3

Query: 267  STSTQK-RGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKD----IETKLE-- 425
            +TST+K     S+L+ST +S     +  +++      T+ P  K + D     E+ +E  
Sbjct: 1682 TTSTEKDEEEESQLQSTPASRDGAEEQQEEVRAKPTPTKVP--KSVSDKKRFFESAMEDQ 1739

Query: 426  -KESEKTDSILQALVNQGNEKVRRSEER 506
             K ++KTD +   L     EK+R+ EER
Sbjct: 1740 HKPTQKTDKVFSFLSKDEVEKLRQEEER 1767

>OPTN_RAT (Q8R5M4) Optineurin (FIP-2-like protein)|
          Length = 585

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 279 QKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSI-L 455
           Q    RSE++   +   +    L  +  TH K      K ++ IE   ++++EK D + L
Sbjct: 368 QVESMRSEIKMEQAKTEEEKSRLATLQATHDKLLQEHNKALRTIEELTKQQAEKVDKVQL 427

Query: 456 QALVNQGNEKVRRSEERAQS 515
           Q L    +EK+  +E+   S
Sbjct: 428 QEL----SEKLELAEQALAS 443

>YJEP_ECOLI (P39285) Hypothetical mscS family protein yjeP precursor|
          Length = 1107

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 423 EKESEKTDSILQALVNQGNEKVRRSEERA 509
           EKES++ D+ LQAL NQ N + +   ERA
Sbjct: 212 EKESQQLDAYLQALRNQLNSQRQLEAERA 240

>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +3

Query: 258 SPMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESE 437
           +P S+  ++  SRS  RS + S S+R        R+H + RG   +       K +++ E
Sbjct: 260 TPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE 319

Query: 438 KTDS 449
           K  S
Sbjct: 320 KKRS 323

>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells|
            cyclophilin-related protein) (NK-TR protein)
          Length = 1453

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
 Frame = +3

Query: 261  PMSTSTQKRGSRSELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETK------- 419
            P S++++   S S L +    P K+  + DD+   H K      K  KD + K       
Sbjct: 946  PQSSASESESSCSNLGNIRGEPQKQKHSKDDLKGDHTKRAREKSKAKKDKKHKAPKRKQA 1005

Query: 420  ------LEKESEKTDSILQALVNQGNEKVRRSEERAQSVKN 524
                  LE   ++ + +    V Q  ++ R   E+ ++VK+
Sbjct: 1006 FHWQPPLEFGDDEEEEMNGKQVTQDPKEKRHVSEKCEAVKD 1046

>OPTN_HUMAN (Q96CV9) Optineurin (Optic neuropathy-inducing protein)|
           (E3-14.7K-interacting protein) (FIP-2)
           (Huntingtin-interacting protein HYPL) (NEMO-related
           protein) (Transcription factor IIIA-interacting protein)
           (TFIIIA-IntP)
          Length = 577

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +3

Query: 297 SELRSTASSPSKRSKTLDDMPRTHGKTRGPFVKYMKDIETKLEKESEKTDSILQALVNQG 476
           SE++   +        L  +  TH K        +K IE    KESEK D   +A++ + 
Sbjct: 370 SEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVD---RAVLKEL 426

Query: 477 NEKVRRSEERAQS 515
           +EK+  +E+   S
Sbjct: 427 SEKLELAEKALAS 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,452,064
Number of Sequences: 219361
Number of extensions: 1468309
Number of successful extensions: 4495
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4481
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)