ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12m03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL512447.14| Human DNA sequence from clone RP11-77B15 on chr... 44 0.49
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
6dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
7dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
8dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
9dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
10dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
12emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.49
13ref|NM_105568.3| Arabidopsis thaliana ubiquitin-protein ligase A... 42 1.9
14gb|AF083480.1|MMPPLD1S09 Mus musculus phospholipase D1 (PLD1) ge... 42 1.9
15gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, com... 42 1.9
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
17gb|AC124440.3| Mus musculus BAC clone RP24-176E5 from chromosome... 42 1.9
18emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3 42 1.9
19gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, comp... 42 1.9
20ref|NM_001018501.1| Schizosaccharomyces pombe 972h- hypothetical... 42 1.9
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
22gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L... 42 1.9
23gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genom... 42 1.9
24gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, co... 42 1.9
25gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, comp... 40 7.6
26gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
27gb|AC159245.2| Mus musculus BAC clone RP24-260B5 from chromosome... 40 7.6
28gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.6
29gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital ... 40 7.6
30gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 40 7.6
31gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, comp... 40 7.6
32gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
33gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, comp... 40 7.6
34emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in ... 40 7.6
35gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosom... 40 7.6
36emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on ... 40 7.6
37emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on ch... 40 7.6
38gb|DQ014512.1| Reticulitermes flavipes gut symbiont cell-3 exogl... 40 7.6
39gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, com... 40 7.6
40emb|CR388096.8| Zebrafish DNA sequence from clone DKEY-146L2 in ... 40 7.6
41gb|AC063947.30| Homo sapiens 12 BAC RP11-350G24 (Roswell Park Ca... 40 7.6
42gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, com... 40 7.6
43gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, co... 40 7.6
44gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, comp... 40 7.6
45dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 7.6
46gb|AC008492.3| Homo sapiens chromosome 5 clone CTC-427F23, compl... 40 7.6
47gb|AC109356.3| Homo sapiens BAC clone RP11-631I16 from 4, comple... 40 7.6
48gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, comple... 40 7.6
49gb|AC104657.2| Homo sapiens BAC clone RP11-567F17 from 4, comple... 40 7.6
50gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complet... 40 7.6
51gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, co... 40 7.6
52gb|AC008621.8| Homo sapiens chromosome 5 clone CTB-147K10, compl... 40 7.6
53ref|XM_571960.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 7.6
54gb|BC103355.1| Bos taurus hematopoietic cell-specific Lyn substr... 40 7.6
55gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1)... 40 7.6
56gb|AC155329.7| Mus musculus 6 BAC RP24-183K24 (Roswell Park Canc... 40 7.6
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
58gb|AY259117.1| Homo sapiens defender against cell death 1 (DAD1)... 40 7.6
59gb|AC021072.27| Homo sapiens 12 BAC RP11-624J6 (Roswell Park Can... 40 7.6
60gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, comple... 40 7.6
61dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
62dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
63dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
64dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
65dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
66dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
67emb|CR392368.7| Zebrafish DNA sequence from clone DKEY-86E18 in ... 40 7.6
68emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in ... 40 7.6
69emb|AL160314.7|CNS01RH3 Human chromosome 14 DNA sequence BAC C-2... 40 7.6
70gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6... 40 7.6
71gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, comple... 40 7.6
72ref|NM_001035057.1| Bos taurus hematopoietic cell-specific Lyn s... 40 7.6 
>emb|AL512447.14| Human DNA sequence from clone RP11-77B15 on chromosome 6 Contains part
             of the FUT9 gene for fucosyltransferase 9 (alpha (1,3)
             fucosyltransferase), complete sequence
          Length = 102086

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 391   taaaatatatgaaggacattga 412
             ||||||||||||||||||||||
Sbjct: 38850 taaaatatatgaaggacattga 38871
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 420      ttggagaaggaaagtgagaaaa 441
                ||||||||||||||||||||||
Sbjct: 12348616 ttggagaaggaaagtgagaaaa 12348637
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 376      ctaggggtccatttgtaaaata 397
                ||||||||||||||||||||||
Sbjct: 21684881 ctaggggtccatttgtaaaata 21684860



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 376      ctaggggtccatttgtaaaa 395
                ||||||||||||||||||||
Sbjct: 13909187 ctaggggtccatttgtaaaa 13909168



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 11949013 aggggtccatttgtaaaata 11949032



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 11941710 aggggtccatttgtaaaata 11941691
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 376      ctaggggtccatttgtaaaata 397
                ||||||||||||||||||||||
Sbjct: 28042437 ctaggggtccatttgtaaaata 28042458
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 376     ctaggggtccatttgtaaaata 397
               ||||||||||||||||||||||
Sbjct: 9426174 ctaggggtccatttgtaaaata 9426195



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 16341091 aggggtccatttgtaaaata 16341110
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1343_D04
          Length = 143407

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 376    ctaggggtccatttgtaaaata 397
              ||||||||||||||||||||||
Sbjct: 131771 ctaggggtccatttgtaaaata 131792
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>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0059O19
          Length = 144386

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 376   ctaggggtccatttgtaaaata 397
             ||||||||||||||||||||||
Sbjct: 13796 ctaggggtccatttgtaaaata 13817
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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0450A04
          Length = 162545

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 376   ctaggggtccatttgtaaaata 397
             ||||||||||||||||||||||
Sbjct: 25733 ctaggggtccatttgtaaaata 25754
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>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C12
          Length = 136799

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 376   ctaggggtccatttgtaaaata 397
             ||||||||||||||||||||||
Sbjct: 52451 ctaggggtccatttgtaaaata 52430
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>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0708B04
          Length = 170523

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 376    ctaggggtccatttgtaaaata 397
              ||||||||||||||||||||||
Sbjct: 145055 ctaggggtccatttgtaaaata 145034
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 420      ttggagaaggaaagtgagaaaa 441
                ||||||||||||||||||||||
Sbjct: 12302986 ttggagaaggaaagtgagaaaa 12303007
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 420   ttggagaaggaaagtgagaaaa 441
             ||||||||||||||||||||||
Sbjct: 62981 ttggagaaggaaagtgagaaaa 63002
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>ref|NM_105568.3| Arabidopsis thaliana ubiquitin-protein ligase AT1G68940 mRNA,
            complete cds
          Length = 3102

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 86   cagaccaaatctcaagaaatttaga 110
            |||||||||||| ||||||||||||
Sbjct: 1415 cagaccaaatcttaagaaatttaga 1439
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>gb|AF083480.1|MMPPLD1S09 Mus musculus phospholipase D1 (PLD1) gene, exon 11, complete
           sequence
          Length = 510

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 322 gtccttcaaagagaagcaaaa 342
           |||||||||||||||||||||
Sbjct: 158 gtccttcaaagagaagcaaaa 138
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>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 430   aaagtgagaaaacagactcta 450
             |||||||||||||||||||||
Sbjct: 70631 aaagtgagaaaacagactcta 70611
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 377      taggggtccatttgtaaaata 397
                |||||||||||||||||||||
Sbjct: 21960491 taggggtccatttgtaaaata 21960471



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 21967406 aggggtccatttgtaaaata 21967425
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>gb|AC124440.3| Mus musculus BAC clone RP24-176E5 from chromosome 3, complete sequence
          Length = 173198

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tccttcaaagagaagcaaaac 343
             |||||||||||||||||||||
Sbjct: 45230 tccttcaaagagaagcaaaac 45210
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>emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3
          Length = 41181

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 323   tccttcaaagagaagcaaaacttta 347
             ||||| |||||||||||||||||||
Sbjct: 20441 tccttgaaagagaagcaaaacttta 20465
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>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence
          Length = 159749

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   cgctgtggatggttcatctgc 181
             |||||||||||||||||||||
Sbjct: 70240 cgctgtggatggttcatctgc 70220
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>ref|NM_001018501.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC23G3.04),
           partial mRNA
          Length = 585

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 323 tccttcaaagagaagcaaaacttta 347
           ||||| |||||||||||||||||||
Sbjct: 64  tccttgaaagagaagcaaaacttta 88
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 377      taggggtccatttgtaaaata 397
                |||||||||||||||||||||
Sbjct: 21953520 taggggtccatttgtaaaata 21953500



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 21960435 aggggtccatttgtaaaata 21960454
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>gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L1 genomic sequence, complete
             sequence
          Length = 100515

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 86    cagaccaaatctcaagaaatttaga 110
             |||||||||||| ||||||||||||
Sbjct: 65459 cagaccaaatcttaagaaatttaga 65435
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>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
             sequence
          Length = 127210

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 377   taggggtccatttgtaaaata 397
             |||||||||||||||||||||
Sbjct: 48525 taggggtccatttgtaaaata 48545



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 41610 aggggtccatttgtaaaata 41591
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>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence
          Length = 224670

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 161  cgctgtggatggttcatctgc 181
            |||||||||||||||||||||
Sbjct: 1664 cgctgtggatggttcatctgc 1684
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>gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, complete sequence
          Length = 187230

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gagttaaataatgatgatga 229
             ||||||||||||||||||||
Sbjct: 71980 gagttaaataatgatgatga 71961
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>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
              complete sequence
          Length = 150825

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    aggggtccatttgtaaaata 397
              ||||||||||||||||||||
Sbjct: 127449 aggggtccatttgtaaaata 127430
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>gb|AC159245.2| Mus musculus BAC clone RP24-260B5 from chromosome 12, complete sequence
          Length = 168773

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    ggtgggaaaaagaaatcaaggaca 87
             ||||||||| ||||||||||||||
Sbjct: 41547 ggtgggaaacagaaatcaaggaca 41570
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    ggagaaggaaagtgagaaaa 441
              ||||||||||||||||||||
Sbjct: 669829 ggagaaggaaagtgagaaaa 669848
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>gb|AC150644.4| Bos taurus  BAC CH240-223I2 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 199501

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tgtaaaatatatgaaggaca 408
              ||||||||||||||||||||
Sbjct: 139093 tgtaaaatatatgaaggaca 139074
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tcaaagagaagcaaaacttt 346
              ||||||||||||||||||||
Sbjct: 122846 tcaaagagaagcaaaacttt 122827
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>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence
          Length = 186990

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   agaaatttagaaatggtaac 119
             ||||||||||||||||||||
Sbjct: 42754 agaaatttagaaatggtaac 42735
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>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0014K18, complete sequence
          Length = 123508

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 51999 aggggtccatttgtaaaata 51980
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>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence
          Length = 211657

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tcaaagagaagcaaaacttt 346
             ||||||||||||||||||||
Sbjct: 28965 tcaaagagaagcaaaacttt 28946
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>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22, complete
              sequence
          Length = 122651

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    agaaggaaagtgagaaaaca 443
              ||||||||||||||||||||
Sbjct: 105830 agaaggaaagtgagaaaaca 105811



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   agaaggaaagtgagaaaaca 443
             ||||||||||||||||||||
Sbjct: 73931 agaaggaaagtgagaaaaca 73912
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>gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosome 12, complete sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 480    gaaaaggttaggagaagtga 499
              ||||||||||||||||||||
Sbjct: 115319 gaaaaggttaggagaagtga 115338
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>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete
             sequence
          Length = 177568

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 439   aaacagactctattttgcaggctc 462
             |||||| |||||||||||||||||
Sbjct: 34443 aaacagtctctattttgcaggctc 34466
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>emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on chromosome 9, complete
              sequence
          Length = 190651

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     aaaagaaatcaaggacagac 90
              ||||||||||||||||||||
Sbjct: 126489 aaaagaaatcaaggacagac 126470
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>gb|DQ014512.1| Reticulitermes flavipes gut symbiont cell-3 exoglucanase-type
           cellulase mRNA, complete cds
          Length = 1448

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 56  tgcagattggtgggaaaaagaaat 79
           ||||||||||||||||| ||||||
Sbjct: 474 tgcagattggtgggaaacagaaat 497
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>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence
          Length = 203826

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    tccttcaaagagaagcaaaa 342
              ||||||||||||||||||||
Sbjct: 125133 tccttcaaagagaagcaaaa 125114
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>emb|CR388096.8| Zebrafish DNA sequence from clone DKEY-146L2 in linkage group 5,
             complete sequence
          Length = 139460

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   agaaaacagactctattttg 455
             ||||||||||||||||||||
Sbjct: 82829 agaaaacagactctattttg 82848
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>gb|AC063947.30| Homo sapiens 12 BAC RP11-350G24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 196877

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 418    agttggagaaggaaagtgagaaaa 441
              ||||| ||||||||||||||||||
Sbjct: 141689 agttgtagaaggaaagtgagaaaa 141712
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>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence
          Length = 134242

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     tggtgggaaaaagaaatcaa 82
              ||||||||||||||||||||
Sbjct: 104499 tggtgggaaaaagaaatcaa 104480
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>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence
          Length = 189559

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    aagagaagcaaaactttaga 349
              ||||||||||||||||||||
Sbjct: 114392 aagagaagcaaaactttaga 114411
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>gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, complete sequence
          Length = 129469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tggtgggaaaaagaaatcaa 82
             ||||||||||||||||||||
Sbjct: 91400 tggtgggaaaaagaaatcaa 91419
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    ggagaaggaaagtgagaaaacaga 445
              |||||||||||| |||||||||||
Sbjct: 218285 ggagaaggaaagagagaaaacaga 218262
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>gb|AC008492.3| Homo sapiens chromosome 5 clone CTC-427F23, complete sequence
          Length = 138127

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   agtagtccttcaaagagaagcaaa 341
             ||||||||||||||||| ||||||
Sbjct: 90344 agtagtccttcaaagagtagcaaa 90321
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>gb|AC109356.3| Homo sapiens BAC clone RP11-631I16 from 4, complete sequence
          Length = 63578

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aaagaaatcaaggacagaccaaat 95
             ||||||||||||||||| ||||||
Sbjct: 58206 aaagaaatcaaggacagcccaaat 58183
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>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence
          Length = 174696

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   taaaatatatgaaggacatt 410
             ||||||||||||||||||||
Sbjct: 48767 taaaatatatgaaggacatt 48748
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>gb|AC104657.2| Homo sapiens BAC clone RP11-567F17 from 4, complete sequence
          Length = 126525

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   ggctcttgtgaaccaaggca 477
             ||||||||||||||||||||
Sbjct: 78186 ggctcttgtgaaccaaggca 78205
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>gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complete sequence
          Length = 170227

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 542    tgagtgtggagcatcagaag 561
              ||||||||||||||||||||
Sbjct: 160525 tgagtgtggagcatcagaag 160506
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>gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, complete sequence
          Length = 174380

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gaaatcaaggacagaccaaa 94
              ||||||||||||||||||||
Sbjct: 131763 gaaatcaaggacagaccaaa 131744
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>gb|AC008621.8| Homo sapiens chromosome 5 clone CTB-147K10, complete sequence
          Length = 67086

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   agtagtccttcaaagagaagcaaa 341
             ||||||||||||||||| ||||||
Sbjct: 63859 agtagtccttcaaagagtagcaaa 63836
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>ref|XM_571960.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 5243

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 ggagaaggaaagtgagaaaa 441
           ||||||||||||||||||||
Sbjct: 324 ggagaaggaaagtgagaaaa 343
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>gb|BC103355.1| Bos taurus hematopoietic cell-specific Lyn substrate 1, mRNA (cDNA
            clone MGC:127454 IMAGE:7949030), complete cds
          Length = 3126

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 424  agaaggaaagtgagaaaaca 443
            ||||||||||||||||||||
Sbjct: 1969 agaaggaaagtgagaaaaca 1950
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>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds
          Length = 99431

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 400   tgaaggacattgaaactaagttgg 423
             |||||||||||||| |||||||||
Sbjct: 99213 tgaaggacattgaagctaagttgg 99236



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 400   tgaaggacattgaaactaagttgg 423
             |||||||||||||| |||||||||
Sbjct: 66018 tgaaggacattgaagctaagttgg 65995
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>gb|AC155329.7| Mus musculus 6 BAC RP24-183K24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 146487

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aaatcaaggacagaccaaat 95
             ||||||||||||||||||||
Sbjct: 47891 aaatcaaggacagaccaaat 47910
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 378      aggggtccatttgtaaaata 397
                ||||||||||||||||||||
Sbjct: 19799375 aggggtccatttgtaaaata 19799356
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>gb|AY259117.1| Homo sapiens defender against cell death 1 (DAD1) gene, complete cds
          Length = 26315

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aaaaagaaatcaaggacagaccaa 93
            ||||| ||||||||||||||||||
Sbjct: 8358 aaaaaaaaatcaaggacagaccaa 8335
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>gb|AC021072.27| Homo sapiens 12 BAC RP11-624J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55034

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   tgacctggatggcaatgaag 246
             ||||||||||||||||||||
Sbjct: 38801 tgacctggatggcaatgaag 38820
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>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence
          Length = 177855

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   gtcagaaccttgccattgag 545
             ||||||||||||||||||||
Sbjct: 28536 gtcagaaccttgccattgag 28555
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>dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1568_D07
          Length = 83857

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 36192 aggggtccatttgtaaaata 36211
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>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0008F02
          Length = 139655

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 17654 aggggtccatttgtaaaata 17673
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>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0024C06
          Length = 177529

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 aggggtccatttgtaaaata 397
           ||||||||||||||||||||
Sbjct: 508 aggggtccatttgtaaaata 527
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>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0465H09
          Length = 148590

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    ctaggggtccatttgtaaaa 395
              ||||||||||||||||||||
Sbjct: 116906 ctaggggtccatttgtaaaa 116887
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>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_D12
          Length = 105521

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   ctaggggtccatttgtaaaa 395
             ||||||||||||||||||||
Sbjct: 53582 ctaggggtccatttgtaaaa 53563
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>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1212_C09
          Length = 120818

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 98158 aggggtccatttgtaaaata 98177



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   aggggtccatttgtaaaata 397
             ||||||||||||||||||||
Sbjct: 90855 aggggtccatttgtaaaata 90836
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>emb|CR392368.7| Zebrafish DNA sequence from clone DKEY-86E18 in linkage group 20,
             complete sequence
          Length = 87973

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   tggatggttcatctgcttat 185
             ||||||||||||||||||||
Sbjct: 84609 tggatggttcatctgcttat 84590
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>emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in linkage group 22,
             complete sequence
          Length = 234949

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   agaaggaaagtgagaaaaca 443
             ||||||||||||||||||||
Sbjct: 52906 agaaggaaagtgagaaaaca 52925
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>emb|AL160314.7|CNS01RH3 Human chromosome 14 DNA sequence BAC C-2555K7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208953

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    aaaaagaaatcaaggacagaccaa 93
             ||||| ||||||||||||||||||
Sbjct: 50691 aaaaaaaaatcaaggacagaccaa 50714
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>gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6, complete sequence
          Length = 138473

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   taaaatatatgaaggacattgaaa 414
             ||||||| ||||||||||||||||
Sbjct: 58586 taaaataaatgaaggacattgaaa 58563
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>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence
          Length = 208779

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   gaaaaggttaggagaagtga 499
             ||||||||||||||||||||
Sbjct: 25124 gaaaaggttaggagaagtga 25143
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>ref|NM_001035057.1| Bos taurus hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA
          Length = 3126

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 424  agaaggaaagtgagaaaaca 443
            ||||||||||||||||||||
Sbjct: 1969 agaaggaaagtgagaaaaca 1950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,866
Number of Sequences: 3902068
Number of extensions: 5989866
Number of successful extensions: 136515
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135964
Number of HSP's gapped (non-prelim): 551
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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