| Clone Name | basd13a23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 950 bits (479), Expect = 0.0 Identities = 516/527 (97%), Gaps = 1/527 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 79475 ctacaaaaggaaattaactctgtaaaccagag-atttaatatttctatcgaaaaagttaa 79417 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79416 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 79357 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79356 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 79297 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79296 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgcgccgaatc 79237 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79236 cattaaaaagggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79177 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79176 tccaattcggactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 79117 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagacttt 429 |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 79116 ataagtaatcttgtcttcggattctgtccattgatagaatcaaaaatgacaagagacttt 79057 Query: 430 tttcctgaaatccctgcaaaagaagaaattctacctctttctataagatttaatgaaaat 489 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79056 tttcctgaaatccctgcaaaagaagaaattatacctctttctataagatttaatgaaaat 78997 Query: 490 tgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78996 tgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 78950 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 78923 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 78877
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 79662 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 79604 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79603 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 79544 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79543 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 79484 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 79483 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 79424 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79423 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79364 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 79363 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 79304 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 79303 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 79244 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79243 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 79184 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79183 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 79133 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 79059 actaataaccaacctattgcttcgta 79034
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 55725 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 55667 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55666 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 55607 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 55606 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 55547 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 55546 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 55487 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 55486 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 55427 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 55426 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 55367 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 55366 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 55307 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 55306 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 55247 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 55246 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 55196 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 55122 actaataaccaacctattgcttcgta 55097
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 128553 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 128495 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128494 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 128435 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 128434 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 128375 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 128374 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 128315 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 128314 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 128255 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 128254 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 128195 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 128194 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 128135 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 128134 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 128075 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 128074 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 128024 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 127950 actaataaccaacctattgcttcgta 127925
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 71035 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 71093 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71094 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 71153 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 71154 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 71213 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 71214 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 71273 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 71274 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 71333 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 71334 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 71393 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 71394 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 71453 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 71454 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 71513 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 71514 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 71564 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 71638 actaataaccaacctattgcttcgta 71663 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 5730 actaataaccaacctattgcttcgta 5705
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 9189962 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 9190020 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9190021 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 9190080 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9190081 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 9190140 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 9190141 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 9190200 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9190201 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 9190260 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 9190261 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 9190320 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 9190321 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 9190380 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9190381 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 9190440 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 9190441 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 9190491 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 9113009 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 9113067 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9113068 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 9113127 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9113128 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 9113187 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 9113188 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 9113247 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9113248 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 9113307 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 9113308 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 9113367 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 9113368 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 9113427 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9113428 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 9113487 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 9113488 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 9113538 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 9190565 actaataaccaacctattgcttcgta 9190590 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 9113612 actaataaccaacctattgcttcgta 9113637 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 9047804 actaataaccaacctattgcttcgta 9047779
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 12758266 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 12758208 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12758207 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 12758148 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12758147 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 12758088 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 12758087 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 12758028 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12758027 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 12757968 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 12757967 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 12757908 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 12757907 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 12757848 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12757847 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 12757788 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 12757787 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 12757737 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 160 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 219 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 19543473 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 19543531 Query: 220 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 279 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 19543532 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 19543591 Query: 280 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 339 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19543592 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 19543651 Query: 340 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 399 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 19543652 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 19543711 Query: 400 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 455 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 19543712 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 19543771 Query: 456 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 515 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 19543772 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 19543831 Query: 516 tgcttagtgtgtgactcgtta 536 || |||||||||||||||||| Sbjct: 19543832 tgtttagtgtgtgactcgtta 19543852 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 19543923 actaataaccaacctattgcttcgta 19543948 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 12757663 actaataaccaacctattgcttcgta 12757638
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 676 bits (341), Expect = 0.0 Identities = 486/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 79659 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 79601 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79600 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 79541 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79540 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 79481 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 79480 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 79421 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79420 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79361 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 79360 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 79301 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 79300 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 79241 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79240 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 79181 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79180 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 79130 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 79056 actaataaccaacctattgcttcgta 79031
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 1197 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 1255 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1256 agaaccttatagacaacctaacattcttgtagaatatatagctttccaattaaaaaatag 1315 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1316 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 1375 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 1376 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 1435 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1436 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 1495 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1496 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 1555 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 1556 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 1615 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 1675 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1676 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 1799 actaataaccaacctattgcttcgta 1824
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 1197 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 1255 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1256 agaaccttatagacaacctaacattcttgtagaatatatagctttccaattaaaaaatag 1315 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1316 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 1375 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 1376 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 1435 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1436 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 1495 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1496 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 1555 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 1556 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 1615 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 1675 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1676 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 1799 actaataaccaacctattgcttcgta 1824
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 1105 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 1163 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1164 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 1223 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1224 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 1283 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| Sbjct: 1284 gggagtaaaagtaaaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatg 1343 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1344 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 1403 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1404 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 1463 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 1464 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 1523 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1524 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 1583 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1584 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 1634 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 1707 actaataaccaacctattgcttcgta 1732
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 79719 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 79661 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79660 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 79601 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79600 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 79541 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| | Sbjct: 79540 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtg 79481 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79480 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79421 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 79420 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 79361 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 79360 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 79301 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79300 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 79241 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79240 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 79190 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 79116 actaataaccaacctattgcttcgta 79091
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 79719 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 79661 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79660 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 79601 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79600 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 79541 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| | Sbjct: 79540 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtg 79481 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79480 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79421 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 79420 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 79361 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 79360 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 79301 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79300 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 79241 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79240 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 79190 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 79116 actaataaccaacctattgcttcgta 79091
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 79706 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 79648 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79647 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 79588 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79587 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 79528 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| | Sbjct: 79527 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtg 79468 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79467 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 79408 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 79407 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 79348 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 79347 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 79288 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79287 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 79228 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79227 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 79177 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 79103 actaataaccaacctattgcttcgta 79078
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 77899 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 77841 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77840 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 77781 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 77780 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 77721 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 77720 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 77661 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 77660 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 77601 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| Sbjct: 77600 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacaaaga 77541 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 77540 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 77481 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 77480 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 77421 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 77420 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 77370 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 77297 actaataaccaacctattgcttcgta 77272
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 11963 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 11905 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11904 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 11845 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 11844 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 11785 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 11784 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 11725 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 11724 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 11665 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| Sbjct: 11664 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacaaaga 11605 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 11604 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 11545 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 11544 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 11485 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 11484 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 11434 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 11361 actaataaccaacctattgcttcgta 11336
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 10371507 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 10371449 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10371448 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 10371389 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10371388 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 10371329 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 10371328 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 10371269 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10371268 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 10371209 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| Sbjct: 10371208 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacaaaga 10371149 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 10371148 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 10371089 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10371088 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 10371029 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 10371028 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 10370978 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 10370905 actaataaccaacctattgcttcgta 10370880
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 14453980 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 14454038 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14454039 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 14454098 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14454099 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 14454158 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 14454159 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 14454218 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 14454219 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 14454278 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 14454279 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 14454338 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | | |||||||||||||||||||| || Sbjct: 14454339 ataaccaaccctgtcttcccattctgttcagtaagagaataaaaaatgacaagagcctta 14454398 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14454399 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 14454458 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 14454459 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 14454509 Score = 638 bits (322), Expect = e-180 Identities = 483/532 (90%), Gaps = 6/532 (1%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 11894187 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 11894245 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11894246 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 11894305 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaag-cagatataa 188 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 11894306 agtttcattccaaaaggcaatgaaaaaagccattgaattaactaaaaaaaacagatataa 11894365 Query: 189 ggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 248 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 11894366 agggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaat 11894425 Query: 249 ccattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgct 308 ||| |||| | |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 11894426 gcatcaaaaaagatagacttcccctccaaacaattcacgctaaaattgattattgctgct 11894485 Query: 309 atccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaag 368 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 11894486 atccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaag 11894545 Query: 369 aataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact- 427 |||||| || | ||||||| ||||||| || | ||||||||||||||||||||| ||| Sbjct: 11894546 aataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagatactt 11894605 Query: 428 -tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatg 484 |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 11894606 attttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatg 11894665 Query: 485 aaaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 11894666 aaaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 11894717 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 14454583 actaataaccaacctattgcttcgta 14454608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 11894788 actaataaccaacctattgcttcgta 11894813
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 9257352 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 9257410 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9257411 agaaccttatagacaacctaacattcttgtagaatatatagctttccaattaaaaaatag 9257470 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9257471 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 9257530 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 9257531 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 9257590 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9257591 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 9257650 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 9257651 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 9257710 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 9257711 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 9257770 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9257771 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 9257830 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 9257831 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 9257881 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 9257954 actaataaccaacctattgcttcgta 9257979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 cctgcaaaagaagaaattct 461 |||||||||||||||||||| Sbjct: 25650014 cctgcaaaagaagaaattct 25650033
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 27925191 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 27925133 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27925132 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 27925073 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27925072 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 27925013 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| Sbjct: 27925012 gggagtaaaagtaaaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatg 27924953 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27924952 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 27924893 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 27924892 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 27924833 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 27924832 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 27924773 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27924772 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 27924713 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 27924712 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 27924662 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 27924589 actaataaccaacctattgcttcgta 27924564
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 88549 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 88491 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88490 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 88431 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 88430 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 88371 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| Sbjct: 88370 gggagtaaaagtaaaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatg 88311 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88310 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 88251 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 88250 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 88191 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 88190 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 88131 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 88130 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 88071 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 88070 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 88020 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 87947 actaataaccaacctattgcttcgta 87922
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 68565 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 68623 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68624 agaaccttatagacaacctaacattcttgtagaatatatagctttccaattaaaaaatag 68683 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 68684 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 68743 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 68744 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 68803 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 68804 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 68863 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 68864 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 68923 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 68924 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 68983 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 68984 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 69043 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 69044 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 69094 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 69167 actaataaccaacctattgcttcgta 69192
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 14525 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 14467 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14466 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 14407 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14406 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 14347 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| Sbjct: 14346 gggagtaaaagtaaaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatg 14287 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 14286 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 14227 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 14226 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 14167 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 14166 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 14107 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14106 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 14047 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 14046 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 13996 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 13923 actaataaccaacctattgcttcgta 13898
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 145783 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 145841 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145842 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 145901 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 145902 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 145961 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 145962 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 146021 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146022 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 146081 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 146082 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 146141 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | | |||||||||||||||||||| || Sbjct: 146142 ataaccaaccctgtcttcccattctgttcagtaagagaataaaaaatgacaagagcctta 146201 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 146202 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 146261 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 146262 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 146312 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 146386 actaataaccaacctattgcttcgta 146411
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 53545 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 53603 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53604 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 53663 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 53664 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 53723 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 53724 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 53783 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53784 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 53843 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 53844 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 53903 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | | |||||||||||||||||||| || Sbjct: 53904 ataaccaaccctgtcttcccattctgttcagtaagagaataaaaaatgacaagagcctta 53963 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 53964 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 54023 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 54024 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 54074 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 54148 actaataaccaacctattgcttcgta 54173
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 1197 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 1255 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 1315 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1316 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 1375 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| | Sbjct: 1376 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtg 1435 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1436 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 1495 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1496 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 1555 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 1556 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 1615 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 1675 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1676 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 1800 actaataaccaacctattgcttcgta 1825
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 668 bits (337), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 10377546 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 10377488 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10377487 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 10377428 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10377427 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 10377368 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 10377367 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatg 10377308 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10377307 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 10377248 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| Sbjct: 10377247 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacaaaga 10377188 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact-- 427 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 10377187 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagcctta 10377128 Query: 428 tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatga 485 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10377127 ttttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatga 10377068 Query: 486 aaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 10377067 aaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 10377017 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 10376944 actaataaccaacctattgcttcgta 10376919
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 638 bits (322), Expect = e-180 Identities = 483/532 (90%), Gaps = 6/532 (1%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 75677 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 75735 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75736 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 75795 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaag-cagatataa 188 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 75796 agtttcattccaaaaggcaatgaaaaaagccattgaattaactaaaaaaaacagatataa 75855 Query: 189 ggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 248 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| Sbjct: 75856 agggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaat 75915 Query: 249 ccattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgct 308 ||| |||| | |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 75916 gcatcaaaaaagatagacttcccctccaaacaattcacgctaaaattgattattgctgct 75975 Query: 309 atccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaag 368 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 75976 atccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaag 76035 Query: 369 aataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact- 427 |||||| || | ||||||| ||||||| || | ||||||||||||||||||||| ||| Sbjct: 76036 aataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagatactt 76095 Query: 428 -tttttcctgaaatccctg--caaaagaagaaattctacctctttctataagatttaatg 484 |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76096 attttccctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatg 76155 Query: 485 aaaattgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 76156 aaaattgagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 76207 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 76278 actaataaccaacctattgcttcgta 76303
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 615 bits (310), Expect = e-173 Identities = 477/528 (90%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 13 caaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaaga 72 ||||||||| |||| |||||||||||| | | |||||||| |||||||||| |||||||| Sbjct: 2613 caaaaggaagttaattctgtaaaccagag-acttaatattgctatcgaaaaggttaaaga 2555 Query: 73 accttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagt 132 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2554 accttatagacaacctaatattcttgcggaatatatagctttccaattaaaaaatagagt 2495 Query: 133 ttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggg 192 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| Sbjct: 2494 ttcattccgaaaagcaatgaaaaaagctattgaattaactaaaaaagcggatataaaggg 2435 Query: 193 agtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccat 252 | ||||| | |||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 2434 aataaaaatccaaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcat 2375 Query: 253 taaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatcc 312 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2374 caaaaagggtagactacccctccaaacaattcgcgctaaaattgattattgctgctatcc 2315 Query: 313 aattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaata 372 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 2314 aattcgaactatctatggagtattaggtgtcaaaatttggatattcgtagaagaagaata 2255 Query: 373 actaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact--ttt 430 ||||| | ||||||| |||| | ||| ||||||||||||||| ||||||| || ||| Sbjct: 2254 actaaccatgtcttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgttt 2196 Query: 431 ttcctgaaatccct--gcaaaagaagaaattctacctctttctataagatttaatgaaaa 488 |||| |||||||| ||||||||||| | | |||||||||||||||||||||||||| Sbjct: 2195 ttccaaaaatccctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaa 2136 Query: 489 ttgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2135 ttaataaatcttttaatataattgctatgcttagtgtgtgactcgtta 2088 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2023 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 1977
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 615 bits (310), Expect = e-173 Identities = 477/528 (90%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 13 caaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaaga 72 ||||||||| |||| |||||||||||| | | |||||||| |||||||||| |||||||| Sbjct: 82170 caaaaggaagttaattctgtaaaccagag-acttaatattgctatcgaaaaggttaaaga 82112 Query: 73 accttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagt 132 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 82111 accttatagacaacctaatattcttgcggaatatatagctttccaattaaaaaatagagt 82052 Query: 133 ttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggg 192 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| Sbjct: 82051 ttcattccgaaaagcaatgaaaaaagctattgaattaactaaaaaagcggatataaaggg 81992 Query: 193 agtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccat 252 | ||||| | |||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 81991 aataaaaatccaaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcat 81932 Query: 253 taaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatcc 312 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 81931 caaaaagggtagactacccctccaaacaattcgcgctaaaattgattattgctgctatcc 81872 Query: 313 aattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaata 372 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 81871 aattcgaactatctatggagtattaggtgtcaaaatttggatattcgtagaagaagaata 81812 Query: 373 actaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact--ttt 430 ||||| | ||||||| |||| | ||| ||||||||||||||| ||||||| || ||| Sbjct: 81811 actaaccatgtcttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgttt 81753 Query: 431 ttcctgaaatccct--gcaaaagaagaaattctacctctttctataagatttaatgaaaa 488 |||| |||||||| ||||||||||| | | |||||||||||||||||||||||||| Sbjct: 81752 ttccaaaaatccctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaa 81693 Query: 489 ttgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 81692 ttaataaatcttttaatataattgctatgcttagtgtgtgactcgtta 81645 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 81580 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 81534
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 607 bits (306), Expect = e-170 Identities = 476/528 (90%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 13 caaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaaga 72 ||||||||| |||| |||||||||||| | | |||||||| |||||||||| |||||||| Sbjct: 81502 caaaaggaagttaattctgtaaaccagag-acttaatattgctatcgaaaaggttaaaga 81444 Query: 73 accttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagt 132 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 81443 accttatagacaacctaatattcttgcggaatatatagctttccaattaaaaaatagagt 81384 Query: 133 ttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggg 192 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| Sbjct: 81383 ttcattccgaaaagcaatgaaaaaagctattgaattaactaaaaaagcggatataaaggg 81324 Query: 193 agtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccat 252 | ||||| | |||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 81323 aataaaaatccaaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcat 81264 Query: 253 taaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatcc 312 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 81263 caaaaagggtagactacccctccaaacaattcgcgctaaaattgattattgctgctatcc 81204 Query: 313 aattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaata 372 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 81203 aattcgaactatctatggagtattaggtgtcaaaatttggatattcgtagaagaagaata 81144 Query: 373 actaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagact--ttt 430 ||||| | ||||||| |||| | ||| ||||||||||||||| ||||||| || ||| Sbjct: 81143 actaaccatgtcttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgttt 81085 Query: 431 ttcctgaaatccct--gcaaaagaagaaattctacctctttctataagatttaatgaaaa 488 |||| |||||||| ||||||||||| | | |||||||||||||||||||||||||| Sbjct: 81084 ttccaaaaatccctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaa 81025 Query: 489 ttgataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 81024 ttaagaaatcttttaatataattgctatgcttagtgtgtgactcgtta 80977 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 80944 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 80898
>dbj|AK060382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E08, full insert sequence Length = 622 Score = 537 bits (271), Expect = e-149 Identities = 380/415 (91%), Gaps = 1/415 (0%) Strand = Plus / Plus Query: 10 ctacaaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaa 69 |||||||| ||| |||| |||||||||||| | | |||||||| ||||||||||| || Sbjct: 186 ctacaaaaagaagttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaa 244 Query: 70 agaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatag 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 agaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaaatag 304 Query: 130 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 305 agtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaa 364 Query: 190 gggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatc 249 ||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| | Sbjct: 365 gggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtg 424 Query: 250 cattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgcta 309 ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 425 catcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgctgcta 484 Query: 310 tccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaaga 369 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 485 tccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaaga 544 Query: 370 ataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagag 424 ||||| || | ||||||| ||||||| || | |||||||||||||||||||||| Sbjct: 545 ataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagag 599
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 517 bits (261), Expect = e-143 Identities = 444/500 (88%), Gaps = 5/500 (1%) Strand = Plus / Minus Query: 23 ttaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaagaaccttataga 82 |||| |||||||||||| | | |||||||| ||||||||||| |||||| |||||||| Sbjct: 17405191 ttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaaagaatcttataga 17405133 Query: 83 cagcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccg 141 || |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 17405132 caacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccg 17405073 Query: 142 aaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagt 201 ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| Sbjct: 17405072 aaaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagt 17405013 Query: 202 aaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaagggg 261 ||||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 17405012 aaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaagg 17404953 Query: 262 cagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaac 321 |||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 17404952 tagacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaac 17404893 Query: 322 tatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatctt 381 |||||||||||||||||| || ||||||||||||||||||||||||||||||| || | | Sbjct: 17404892 tatctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccct 17404833 Query: 382 gtcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaa 439 |||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| ||| Sbjct: 17404832 gtcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaa 17404773 Query: 440 tccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatc 498 ||||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 17404772 tccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatc 17404713 Query: 499 atttaatataattgctatgc 518 ||||||| ||||||||||| Sbjct: 17404712 ttttaataaaattgctatgc 17404693 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgct 519 ||||||||||||||||||||| Sbjct: 10776946 atttaatataattgctatgct 10776926 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 atatagctttccaattaaaaaata 128 |||||| ||||||||||||||||| Sbjct: 2333544 atatagatttccaattaaaaaata 2333521
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 517 bits (261), Expect = e-143 Identities = 444/500 (88%), Gaps = 5/500 (1%) Strand = Plus / Minus Query: 23 ttaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaagaaccttataga 82 |||| |||||||||||| | | |||||||| ||||||||||| |||||| |||||||| Sbjct: 171452 ttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaaagaatcttataga 171394 Query: 83 cagcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccg 141 || |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 171393 caacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccg 171334 Query: 142 aaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagt 201 ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| Sbjct: 171333 aaaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagt 171274 Query: 202 aaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaagggg 261 ||||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 171273 aaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaagg 171214 Query: 262 cagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaac 321 |||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 171213 tagacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaac 171154 Query: 322 tatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatctt 381 |||||||||||||||||| || ||||||||||||||||||||||||||||||| || | | Sbjct: 171153 tatctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccct 171094 Query: 382 gtcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaa 439 |||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| ||| Sbjct: 171093 gtcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaa 171034 Query: 440 tccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatc 498 ||||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 171033 tccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatc 170974 Query: 499 atttaatataattgctatgc 518 ||||||| ||||||||||| Sbjct: 170973 ttttaataaaattgctatgc 170954
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 517 bits (261), Expect = e-143 Identities = 444/500 (88%), Gaps = 5/500 (1%) Strand = Plus / Minus Query: 23 ttaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaagaaccttataga 82 |||| |||||||||||| | | |||||||| ||||||||||| |||||| |||||||| Sbjct: 58583 ttaattctgtaaaccagag-acttaatattgggatcgaaaaagtgaaagaatcttataga 58525 Query: 83 cagcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccg 141 || |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 58524 caacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccg 58465 Query: 142 aaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagt 201 ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| Sbjct: 58464 aaaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagt 58405 Query: 202 aaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaagggg 261 ||||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 58404 aaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaagg 58345 Query: 262 cagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaac 321 |||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 58344 tagacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaac 58285 Query: 322 tatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatctt 381 |||||||||||||||||| || ||||||||||||||||||||||||||||||| || | | Sbjct: 58284 tatctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccct 58225 Query: 382 gtcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaa 439 |||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| ||| Sbjct: 58224 gtcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaa 58165 Query: 440 tccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatc 498 ||||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 58164 tccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatc 58105 Query: 499 atttaatataattgctatgc 518 ||||||| ||||||||||| Sbjct: 58104 ttttaataaaattgctatgc 58085
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 505 bits (255), Expect = e-140 Identities = 368/403 (91%), Gaps = 2/403 (0%) Strand = Plus / Minus Query: 13 caaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaaga 72 ||||||||| |||| |||||||||||| | | |||||||| |||||||||| |||||||| Sbjct: 81472 caaaaggaagttaattctgtaaaccagag-acttaatattgctatcgaaaaggttaaaga 81414 Query: 73 accttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagt 132 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 81413 accttatagacaacctaatattcttgcggaatatatagctttccaattaaaaaatagagt 81354 Query: 133 ttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggg 192 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| Sbjct: 81353 ttcattccgaaaagcaatgaaaaaagctattgaattaactaaaaaagcggatataaaggg 81294 Query: 193 agtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccat 252 | ||||| | |||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 81293 aataaaaatccaaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcat 81234 Query: 253 taaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatcc 312 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 81233 caaaaagggtagactacccctccaaacaattcgcgctaaaattgattattgctgctatcc 81174 Query: 313 aattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaata 372 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 81173 aattcgaactatctatggagtattaggtgtcaaaatttggatattcgtagaagaagaata 81114 Query: 373 actaatcttgtcttcgaattctgtccattgatagaataaaaaa 415 ||||| | ||||||| |||| | ||| ||||||||||||||| Sbjct: 81113 actaaccatgtcttcccattccg-ccagtgatagaataaaaaa 81072 Score = 113 bits (57), Expect = 7e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 463 cctctttctataagatttaatgaaaattgataaatcatttaatataattgctatgcttag 522 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 81023 cctctttctataagatttaatgaaaattaagaaatcttttaatataattgctatgcttag 80964 Query: 523 tgtgtgact 531 ||||||||| Sbjct: 80963 tgtgtgact 80955 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 80918 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 80872
>emb|Y00340.1|CHZMRPS3 Maize chloroplast rps3 gene for ribosomal protein S3 Length = 731 Score = 498 bits (251), Expect = e-137 Identities = 345/375 (92%), Gaps = 1/375 (0%) Strand = Plus / Plus Query: 13 caaaaggaaattaactctgtaaaccaggggatttaatatttctatcgaaaaagttaaaga 72 ||||||||| |||| |||||||||||| | | |||||||| |||||||||| |||||||| Sbjct: 344 caaaaggaagttaattctgtaaaccagag-acttaatattgctatcgaaaaggttaaaga 402 Query: 73 accttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagt 132 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 403 accttatagacaacctaatattcttgcggaatatatagctttccaattaaaaaatagagt 462 Query: 133 ttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggg 192 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| Sbjct: 463 ttcattccgaaaagcaatgaaaaaagctattgaattaactaaaaaagcggatataaaggg 522 Query: 193 agtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccat 252 | ||||| | |||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 523 aataaaaatccaaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcat 582 Query: 253 taaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatcc 312 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 583 caaaaagggtagactacccctccaaacaattcgcgctaaaattgattattgctgctatcc 642 Query: 313 aattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaata 372 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 643 aattcgaactatctatggagtattaggtgtcaaaatttggatattcgtagaagaagaata 702 Query: 373 actaatcttgtcttc 387 ||||| | ||||||| Sbjct: 703 actaaccatgtcttc 717
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 160 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 219 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 144185 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 144243 Query: 220 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 279 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 144244 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 144303 Query: 280 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 339 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144304 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 144363 Query: 340 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 399 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 144364 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 144423 Query: 400 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 455 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 144424 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 144483 Query: 456 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 515 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 144484 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 144543 Query: 516 tgcttagtgtgtgactcgtta 536 || |||||||||||||||||| Sbjct: 144544 tgtttagtgtgtgactcgtta 144564 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 144635 actaataaccaacctattgcttcgta 144660
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 160 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 219 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 3372 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 3430 Query: 220 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 279 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 3431 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 3490 Query: 280 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 339 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3491 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 3550 Query: 340 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 399 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 3551 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 3610 Query: 400 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 455 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 3611 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 3670 Query: 456 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 515 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 3671 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 3730 Query: 516 tgcttagtgtgtgactcgtta 536 || |||||||||||||||||| Sbjct: 3731 tgtttagtgtgtgactcgtta 3751 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 3822 actaataaccaacctattgcttcgta 3847
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 315 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 374 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 23179707 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 23179766 Query: 375 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 432 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 23179767 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 23179826 Query: 433 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 490 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23179827 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 23179886 Query: 491 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 23179887 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 23179932 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 23180003 actaataaccaacctattgcttcgta 23180028 Score = 44.1 bits (22), Expect = 0.54 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 185 ataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgcc 244 |||| |||||| |||||||||||||| | | ||||| || |||||||||| | |||| | Sbjct: 28024386 ataaagggagttaaagtaaaaattgcatgccatctcgtagaaaaagaaattacgcgtgtc 28024445 Query: 245 gaatccattaaaaggggcagacttcccctccaaacaat 282 |||| ||| |||| || ||||||| |||| ||||||| Sbjct: 28024446 gaatacatgaaaa-aggtagacttcacctctaaacaat 28024482 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagt 523 ||||||||||||| ||||||||||| Sbjct: 19457851 atttaatataattcctatgcttagt 19457827
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 315 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 374 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 130355 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 130414 Query: 375 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 432 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 130415 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 130474 Query: 433 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 490 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130475 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 130534 Query: 491 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 130535 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 130580 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 130651 actaataaccaacctattgcttcgta 130676
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 315 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 374 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 14469 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 14528 Query: 375 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 432 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 14529 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 14588 Query: 433 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 490 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14589 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 14648 Query: 491 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 536 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 14649 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 14694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 591 actaataaccaacctattgcttcgta 616 |||||||||||||||||||||||||| Sbjct: 14765 actaataaccaacctattgcttcgta 14790
>gb|DQ069461.1| Typha latifolia ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 236 bits (119), Expect = 7e-59 Identities = 251/295 (85%) Strand = Plus / Plus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| |||| ||||| |||||| |||||||||||||||| |||||||||||||||| Sbjct: 356 aaccttatggacaacctaatattctttcagaatatatagctttacaattaaaaaatagag 415 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || ||||| |||||||||||||| |||||||||||| || || | |||| || | Sbjct: 416 tttcgtttcgaaaagcaatgaaaaaagctattgaattaactgaacaaacggatacaaaag 475 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | |||| ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 476 gaattcaagtgcaaattgcaggccgtatcgacggaaaagaaattgcacgtgtcgaatgga 535 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | ||| ||| ||||||| |||||||| ||||||||||||||| |||| | |||| Sbjct: 536 tcagagagggtagagttcccctacaaacaattcgcgctaaaattgatcattgttcctata 595 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacga 366 |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 596 caattcgaactatctatggagtattaggcataaaaatttggatatttgtagacga 650
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 263 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 322 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 9414579 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 9414520 Query: 323 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 382 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 9414519 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 9414460 Query: 383 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 440 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 9414459 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 9414400 Query: 441 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 492 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9414399 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 9414347 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 573 tatagaaaattaactaatactaataacca 601 ||||||| |||||||||||||||||||| Sbjct: 1793022 tatagaagtttaactaatactaataacca 1792994
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 263 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 322 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 28140 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 28081 Query: 323 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 382 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 28080 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 28021 Query: 383 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 440 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 28020 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 27961 Query: 441 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 492 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27960 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 27908
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 263 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 322 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 174833 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 174774 Query: 323 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 382 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 174773 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 174714 Query: 383 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 440 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 174713 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 174654 Query: 441 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 492 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 174653 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 174601
>gb|DQ069462.1| Yucca schidigera ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 660 Score = 204 bits (103), Expect = 2e-49 Identities = 250/299 (83%) Strand = Plus / Plus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| |||| ||||| ||||||||||||||||| |||| ||||||| |||||||| Sbjct: 362 aaccttatggacaccctaatattcttgcagaatatatggcttcacaattaagaaatagag 421 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| ||||||||||||||||||| ||| |||||||||||| || || |||||| || || Sbjct: 422 tttcgttccgaaaggcaatgaaaagagctattgaattaactgaacaaacagatacaaagg 481 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | || || ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 482 gaattcaaatacaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 541 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | || || |||| || |||||||| ||||||||||||||| |||| | |||| Sbjct: 542 tcagagaaggtagggttcctctacaaacaattcgcgctaaaattgatcattgttcctata 601 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaa 370 |||||||||||||| ||||||||||||| |||||||||||||||| || || |||||| Sbjct: 602 caattcgaactatccatggagtattaggcctaaaaatttggatatttgtggatgaagaa 660
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 163 bits (82), Expect = 8e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||| Sbjct: 84232 aaccttatggacaacctaatattcttgcagaatatatagctcgacaattaaagaatagag 84173 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || ||||||||||||||||||| |||||||||||| || |||| || | || | Sbjct: 84172 tttcctttcgaaaggcaatgaaaaaagttattgaattaactgaacaagcggacacaaaag 84113 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | |||| ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 84112 gaattcaagtgcaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 84053 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | ||||| ||||||| ||||| || || |||||||||||| |||| | |||| Sbjct: 84052 tcagagaaggcagggttcccctacaaaccattcgagctaaaattgatcattgttcctata 83993 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 371 || ||||||| || ||||| ||||| || |||||||||||||||| ||||||||| ||| Sbjct: 83992 cagttcgaaccatatatggggtattgggcataaaaatttggatatttgtagacgaacaat 83933 Query: 372 aa 373 || Sbjct: 83932 aa 83931 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 511 tgctatgcttagtgtgtgactcgtt 535 ||||||||||||||||||||||||| Sbjct: 83783 tgctatgcttagtgtgtgactcgtt 83759
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 163 bits (82), Expect = 8e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 ||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 85220 aaccttacggacaacctaatattctcgcagaatatatagctttacaattaaaaaatagag 85161 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 | ||||| |||||||||||||||||||| |||||||||||| || || | | || || | Sbjct: 85160 tctcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaaaccggtacaaaag 85101 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | |||| ||||||| || ||| ||| |||||||| |||||||||| ||||| | Sbjct: 85100 gaattcaagtgcaaattgcaggacgtatcgacggaaaagagattgcacgtgtcgaatgga 85041 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | ||||| ||||||| |||||||| ||||||||||||||| | || | | || Sbjct: 85040 tcagagaaggcagggttcccctacaaacaattcgcgctaaaattgatcactgttcccata 84981 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 371 || || |||||||||||||| | |||||| | |||||||||||||| ||| || |||||| Sbjct: 84980 cagttagaactatctatggaatcttaggtatcaaaatttggatatttgtaaaccaagaat 84921 Query: 372 aa 373 || Sbjct: 84920 aa 84919 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 500 tttaatataattgctatgcttagtgtgtgactcgtta 536 |||| ||||||||||||||| |||||||||||||||| Sbjct: 84750 tttagtataattgctatgctcagtgtgtgactcgtta 84714
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 85776 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 85717 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || ||||||||| || ||| | || || || Sbjct: 85716 gcaatgaaaaaggctattgaattaacagaacaagcagatacaaaaggaattcaaatacaa 85657 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | || || Sbjct: 85656 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggtagg 85597 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || |||||||||||||||||| ||| || ||||||||||| Sbjct: 85596 gttcccctacaaacgattcgagctaaaattgattattgcgcttatacagttcgaactatc 85537 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 ||||||||||| || | |||||||||||||| ||||||| |||||| Sbjct: 85536 tatggagtattgggcatcaaaatttggatatttctagacgaggaataa 85489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactc 532 ||||| ||||||||||||||||||||||||||||| Sbjct: 85359 catttgatataattgctatgcttagtgtgtgactc 85325
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84654 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84595 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84594 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84535 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84534 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84475 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84474 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84415 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84414 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84367 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84239 catttgatataattgctatgcttagtgtgtgactcgtt 84202
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84818 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84759 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84758 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84699 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84698 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84639 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84638 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84579 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84578 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgt 534 ||||| ||||||||||||||||||||||||||||||| Sbjct: 84386 catttgatataattgctatgcttagtgtgtgactcgt 84350
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84815 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84756 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84755 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84696 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84695 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84636 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84635 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84576 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84575 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84528 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgt 534 ||||| ||||||||||||||||||||||||||||||| Sbjct: 84383 catttgatataattgctatgcttagtgtgtgactcgt 84347
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84701 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84642 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84641 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84582 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84581 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84522 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84521 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84462 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84461 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84414 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84285 catttgatataattgctatgcttagtgtgtgactcgtt 84248
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84666 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84607 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84606 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84547 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84546 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84487 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84486 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84427 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84426 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84379 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84251 catttgatataattgctatgcttagtgtgtgactcgtt 84214
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85543 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85484 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85483 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85424 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85423 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85364 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85363 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85304 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 371 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85303 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85244 Query: 372 aa 373 || Sbjct: 85243 aa 85242 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 85112 catttgatataattgctatgcttagtgtgtgactcgtt 85075
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85541 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85482 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85481 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85422 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85421 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85362 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85361 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85302 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 371 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85301 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85242 Query: 372 aa 373 || Sbjct: 85241 aa 85240 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 85110 catttgatataattgctatgcttagtgtgtgactcgtt 85073
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 151 bits (76), Expect = 3e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| ||||||||||||| | ||||| || ||||| Sbjct: 82216 cctaatattcttgcagaatttatagctggccaattaaaaaatcgcgtttcttttcgaaaa 82157 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 82156 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82097 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82096 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82037 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82036 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 81977 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 81976 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 81929 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 504 atataattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||||||| Sbjct: 81758 atataattgctatgcttagtgtgtgactcgtt 81727
>gb|DQ069459.1| Nuphar advena ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 143 bits (72), Expect = 8e-31 Identities = 222/272 (81%) Strand = Plus / Plus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 370 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 429 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| ||||||||| || || |||||||| || |||| | | ||| || Sbjct: 430 gcaatgaaaaaagctattgaattagctgaacaagcagatgcaaagggaattcaggtacaa 489 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || |||||| ||||| |||||||| || | |||| |||| | ||| || Sbjct: 490 attgcaggacgtctcaacggaaacgaaattgcccgcgttgaatggattagagagggtagg 549 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| || || || || | |||||||||| |||| | ||||||| ||||||||||| Sbjct: 550 gttcccctacagaccattcgagttaaaattgatcattgttcctatccagttcgaactatc 609 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 |||||||||||||| | |||||||||||||| Sbjct: 610 tatggagtattagggatcaaaatttggatatt 641
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 141 bits (71), Expect = 3e-30 Identities = 230/283 (81%) Strand = Plus / Plus Query: 75 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 134 |||||| ||| ||||| ||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 3538 cttataaacaccctaatattcttgcagaatttatagctggacaattaaagaatagagttt 3597 Query: 135 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 194 |||| || || |||||||||||||| |||||||||||| || |||||| || || |||| Sbjct: 3598 catttcgtaaagcaatgaaaaaagctattgaattaactgaacaagcaggtacaaaaggag 3657 Query: 195 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 254 | ||||| | ||||| || ||| | | ||||||||||||||||||| ||||| |||| Sbjct: 3658 ttcaagtacagattgcaggacgtattgatggaaaagaaattgcacgtgtcgaatggatta 3717 Query: 255 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 314 | || || |||| || ||||| || || ||||||||||| ||||| || ||| || Sbjct: 3718 gagaaggtagggttcctctacaaaccattcgagctaaaattgaatattgttgttatacag 3777 Query: 315 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 357 |||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 3778 ttcgaactatttatggagttttagggataaaagtttggatatt 3820 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 509 attgctatgcttagtgtgtgactcgtta 536 ||||| |||||||||||||||||||||| Sbjct: 3988 attgccatgcttagtgtgtgactcgtta 4015
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 139 bits (70), Expect = 1e-29 Identities = 244/302 (80%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 ||||||| |||| ||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 87981 aaccttacggacatcctaatattcttgcagaatttatagccggacaattaaggaatagag 87922 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || || |||||||| |||||||| |||||||||||| || | ||||||| || | Sbjct: 87921 tttcgtttcgcaaggcaataaaaaaagctattgaattaactgaacaggcagatacaaaag 87862 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| | Sbjct: 87861 gaattcaagtacaaattgcagggcgtatcgacggaaaagaaattgcacgtgttgaatgga 87802 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 ||| | || || ||||||| ||||| || || ||||||||||||||||| | |||| Sbjct: 87801 ttagagaaggaagggttcccctacaaaccattcgagctaaaattgattattgttcctata 87742 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 371 | |||||||||| ||||| |||||||| | |||||||||||||| |||||||| |||| Sbjct: 87741 gagttcgaactatatatggggtattaggcatcaaaatttggatatttgtagacgaggaat 87682 Query: 372 aa 373 || Sbjct: 87681 aa 87680 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 87526 catttgatataattgctatgcttagtgtgtgactcgtt 87489
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 139 bits (70), Expect = 1e-29 Identities = 229/282 (81%) Strand = Plus / Minus Query: 92 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 151 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 82736 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 82677 Query: 152 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 211 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 82676 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 82617 Query: 212 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 271 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 82616 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 82557 Query: 272 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 331 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 82556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 82497 Query: 332 gtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 |||||||| |||||||||||||||| |||||||| |||||| Sbjct: 82496 gtattaggcataaaaatttggatatttgtagacgaggaataa 82455 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 511 tgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||| Sbjct: 82298 tgctatgcttagtgtgtgactcgtta 82273 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgt 615 ||||||||||||| ||||||||||| Sbjct: 82207 actaataaccaacttattgcttcgt 82183
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85312 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85253 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85252 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85193 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | || || |||||||||| ||| ||| ||||||||||||||||||| |||| | Sbjct: 85192 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgttgaatgga 85133 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85132 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85073 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 357 || |||||||||||||||||||||| || | |||||||||||||| Sbjct: 85072 cagttcgaactatctatggagtattgggcatcaaaatttggatatt 85027 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 504 atataattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||||||| Sbjct: 84875 atataattgctatgcttagtgtgtgactcgtt 84844
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 135 bits (68), Expect = 2e-28 Identities = 233/288 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||| ||| |||||||||||| | ||||| || ||||| Sbjct: 83113 cctaatattcttgcagaatttatcgctggacaattaaaaaatcgcgtttcttttcgaaaa 83054 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 83053 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82994 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82993 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82934 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82933 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 82874 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 82873 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 82826 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 504 atataattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||||||| Sbjct: 82663 atataattgctatgcttagtgtgtgactcgtt 82632
>gb|DQ069457.1| Acorus americanus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 133 bits (67), Expect = 8e-28 Identities = 223/275 (81%) Strand = Plus / Plus Query: 92 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 151 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 376 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 435 Query: 152 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 211 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 436 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 495 Query: 212 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 271 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 496 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 555 Query: 272 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 331 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 615 Query: 332 gtattaggtgtaaaaatttggatattcgtagacga 366 |||||||| |||||||||||||||| |||||||| Sbjct: 616 gtattaggcataaaaatttggatatttgtagacga 650
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82993 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82934 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82933 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82874 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82873 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82814 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82813 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82754 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 ||||| |||||||| | |||||||||||||| Sbjct: 82753 tatggggtattaggcatcaaaatttggatatt 82722 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 495 aatcatttaatataattgctatgcttagtgtgtgactcgtt 535 |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 82571 aatcttttgataaaattgctatgcttagtgtgtgactcgtt 82531
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82991 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82932 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82931 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82872 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82871 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82812 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82811 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82752 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 ||||| |||||||| | |||||||||||||| Sbjct: 82751 tatggggtattaggcatcaaaatttggatatt 82720 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 495 aatcatttaatataattgctatgcttagtgtgtgactcgtt 535 |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 82569 aatcttttgataaaattgctatgcttagtgtgtgactcgtt 82529
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 119 bits (60), Expect = 1e-23 Identities = 231/288 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| Sbjct: 89740 cctaatattcttgcagaatatattgctctgcaattaaaaaatagagtttcatttcgaaaa 89681 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| ||||||||| || || ||||| ||| || ||| | ||| || Sbjct: 89680 gcaatgaaaaaagctattgaattagctgaacaagcaaatacaaaggggattcgggtacaa 89621 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||||| |||||||| ||||| |||| ||||| || | | ||||| Sbjct: 89620 attgcggggcgtctgaacggaaaagagattgcccgtgtcgaatggatcagagaaggcagg 89561 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| || || || || ||||||||||||||||| | ||| ||| ||||||| Sbjct: 89560 gttcccctacacactattcgagctaaaattgattattgttcttatatggttcaaactatc 89501 Query: 326 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 373 || || |||||||| | |||||||||||||| ||||| ||||||||| Sbjct: 89500 tacggggtattagggatcaaaatttggatatttgtagatgaagaataa 89453 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||| ||||||||||||||||||||| Sbjct: 89328 aattgcaatgcttagtgtgtgactcgtt 89301
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Plus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||| |||| || | || Sbjct: 42655 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcgtttaggaaa 42714 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||| |||||||| ||||||||| || || | |||| || || ||||| ||||| || Sbjct: 42715 gcaatcaaaaaagctattgaattagctgaacaggcaggtacaaaaggagttcaagtacaa 42774 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 |||||||| ||| ||| ||||||||||||||||||| ||||| |||| | || || Sbjct: 42775 attgcgggacgtatcgacggaaaagaaattgcacgtgtcgaatggattagagaaggtagg 42834 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| || ||||| || || ||||||||||||||||| | ||||||| |||||||||| Sbjct: 42835 gttcctctacaaaccattcgagctaaaattgattattgttcctatccagttcgaactatt 42894 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 ||||| |||||||| | ||| |||||||||| Sbjct: 42895 tatggggtattaggaatcaaagtttggatatt 42926 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 510 ttgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||| Sbjct: 43076 ttgctatgcttagtgtgtgactcgtt 43101
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| |||||||| |||| |||||| ||||||||| |||||||||||||| ||||| Sbjct: 84969 cctaatattcttgcggaatttatagccggccaattaaagaatagagtttcatttcgaaaa 84910 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || ||||||||||| || ||||||||| || ||| | ||||| || Sbjct: 84909 gcaatgaaaaaggctattgaattaaccgaacaagcagatacaaaaggaattcaagtacaa 84850 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||| |||| |||| || | | || || Sbjct: 84849 attgcagggcgtatcgacggaaaagaaattgcgcgtgtggaatggatcagagaaggtagg 84790 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || || |||||||| |||||||| | |||| | |||||||||| Sbjct: 84789 gttcccctgcaaaccattcgagctaaaatcgattattgttcctatactgttcgaactatt 84730 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 |||||||||||||| | |||||||||||||| Sbjct: 84729 tatggagtattaggcatcaaaatttggatatt 84698 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84543 catttgatataattgctatgcttagtgtgtgactcgtt 84506
>gb|DQ069460.1| Ranunculus macranthus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 651 Score = 115 bits (58), Expect = 2e-22 Identities = 229/286 (80%) Strand = Plus / Plus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 |||||||| | || ||||| ||||||||||||| ||||||| |||||||| ||| ||| Sbjct: 353 aaccttatgggcaacctaatattcttgcagaatttatagctggacaattaaagaatcgag 412 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 191 ||||||| |||||||||||||||||||| |||||||||||| || | ||||||| || | Sbjct: 413 tttcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaggcagatacaaaag 472 Query: 192 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 251 || | || || ||||||| || ||| | | ||||||||||| ||||||| ||||| | Sbjct: 473 gaattcaaatacaaattgcagggcgtattgacggaaaagaaatagcacgtgtcgaatgga 532 Query: 252 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 311 | | | || || ||||||| ||||| || || || |||||||||||||| | ||| Sbjct: 533 tcagagaaggtagggttcccctacaaaccattcgagccaaaattgattattgttcttata 592 Query: 312 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 357 || |||||||||| ||||| | |||||| | |||||||||||||| Sbjct: 593 cagttcgaactatttatggggcattaggaatcaaaatttggatatt 638
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 113 bits (57), Expect = 7e-22 Identities = 216/269 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| |||||||||||||||||||| || || || Sbjct: 82462 cctaatattcttgcagaatttatagccggacaattaaaaaatagagtttcttttcgcaaa 82403 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82402 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82343 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82342 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagagggtagg 82283 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| || ||||| || |||||||||||||||||||| | |||| || ||||||| ||| Sbjct: 82282 gttccactacaaaccattcgcgctaaaattgattattgttcctatacagttcgaacaatc 82223 Query: 326 tatggagtattaggtgtaaaaatttggat 354 ||||| |||||||| | ||||||||||| Sbjct: 82222 tatggggtattaggcatcaaaatttggat 82194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 82017 aattgctatgcttagtgtgtgactcgtt 81990
>emb|Y00375.1|CHZMRP16 Maize chloroplast rpl16 gene for ribosomal protein L16 exon 1 Length = 548 Score = 113 bits (57), Expect = 7e-22 Identities = 66/69 (95%) Strand = Plus / Plus Query: 463 cctctttctataagatttaatgaaaattgataaatcatttaatataattgctatgcttag 522 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 102 cctctttctataagatttaatgaaaattaagaaatcttttaatataattgctatgcttag 161 Query: 523 tgtgtgact 531 ||||||||| Sbjct: 162 tgtgtgact 170 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 207 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 253
>gb|AF446051.1|AF446051S1 Hordeum vulgare Rpl16 (rpl16) gene, exon 1; chloroplast gene for chloroplast product Length = 282 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 110 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 508 aattgctatgcttagtgtgtgactcgtta 536 ||||||||||||||||||||||||||||| Sbjct: 2 aattgctatgcttagtgtgtgactcgtta 30
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 287 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 346 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85236 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85177 Query: 347 atttggatattcgtagacga 366 ||||||||||| |||||||| Sbjct: 85176 atttggatatttgtagacga 85157 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 74 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 133 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85449 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85390 Query: 134 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 193 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85389 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85330 Query: 194 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 248 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85329 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85275 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 495 aatcatttaatataattgctatgcttagtgtgtgactcgt 534 |||||||| | ||||||||||||||||||||| ||||||| Sbjct: 85029 aatcatttgagataattgctatgcttagtgtgcgactcgt 84990
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 88763 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 88704 Query: 146 gcaatgaaaaaagccattgaatta 169 |||||||||||||| ||||||||| Sbjct: 88703 gcaatgaaaaaagctattgaatta 88680 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 289 taaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaat 348 |||||||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 88560 taaaattgatcattgttcctatccagttcgaactatctatggagtattagggataaaaat 88501 Query: 349 ttggatatt 357 ||||||||| Sbjct: 88500 ttggatatt 88492 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 88326 aattgctatgcttagtgtgtgactcgtt 88299
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 287 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 346 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85465 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85406 Query: 347 atttggatattcgtagacga 366 ||||||||||| |||||||| Sbjct: 85405 atttggatatttgtagacga 85386 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 74 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 133 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85678 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85619 Query: 134 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 193 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85618 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85559 Query: 194 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 248 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85558 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 495 aatcatttaatataattgctatgcttagtgtgtgactcgt 534 |||||||| | ||||||||||||||||||||| ||||||| Sbjct: 85258 aatcatttgagataattgctatgcttagtgtgcgactcgt 85219
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 101 bits (51), Expect = 3e-18 Identities = 225/283 (79%) Strand = Plus / Minus Query: 75 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 134 |||||| ||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||| Sbjct: 82246 cttataaacaccctaatattattgcagaatttatagctggacaattaaagaatagagttt 82187 Query: 135 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 194 | || || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 82186 cgtttcgtaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaaggag 82127 Query: 195 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 254 | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| || | Sbjct: 82126 ttcaagtacaaattgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatca 82067 Query: 255 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 314 | || ||| |||| || ||||| || || || ||||| |||||||| |||||| || Sbjct: 82066 gagaaggtagagttcctctacaaaccattcgagcgaaaatagattattgttgctatacag 82007 Query: 315 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 357 |||||||||| ||||| || ||||| | ||| |||||||||| Sbjct: 82006 ttcgaactatttatggggttttagggatcaaagtttggatatt 81964 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||| ||||||||| Sbjct: 81780 attgctatgcttagtgtgcgactcgtta 81753
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 87.7 bits (44), Expect = 4e-14 Identities = 215/272 (79%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| || ||||| |||||||||||||| || || Sbjct: 87829 cctaatattcttgcagaatttatagccggacagttaaagaatagagtttcatttcgcaaa 87770 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||| ||||| || ||||||||||| || | ||||||| || ||| | ||||| || Sbjct: 87769 gcaataaaaaaggctattgaattaaccgaacaggcagatacaaaaggaattcaagtacaa 87710 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| ||||| || | ||||||||||||||||||| ||||| || | | || || Sbjct: 87709 attgcaggtcgcctggacggaaaagaaattgcacgtgtcgaatggatgagagaaggtagg 87650 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 |||| || ||||| || || ||||||||||||||||| | |||| | | ||||| || Sbjct: 87649 gttcctctacaaaccattcgagctaaaattgattattgttcctatggagtccgaacggtc 87590 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 |||||||||||||| | |||||||||||||| Sbjct: 87589 tatggagtattaggcatcaaaatttggatatt 87558 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtt 535 |||| ||||||||||||||||||||||| |||||||| Sbjct: 87403 atttcatataattgctatgcttagtgtgcgactcgtt 87367
>emb|AJ560717.1|OMI560717 Orobanche minor chloroplast rps19 gene (partial), rpl22 gene and rps3 gene (partial) Length = 1121 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 ||||||||||| | || || ||| ||||||||| |||||| ||||||||| ||||||| Sbjct: 980 aaccttatagaaaccccaatattattgcagaatttatagccaaccaattaaataatagag 1039 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagca 181 ||||||| |||| ||||||||||| || |||||||||||| || ||||| Sbjct: 1040 tttcatttagaaaagcaatgaaaaaggctattgaattaactgaacaagca 1089
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Minus Query: 75 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 134 |||||||| | ||||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 80984 cttatagagatcctaatattcttgcagaattcatagccggacaattaaaaaatagagttt 80925 Query: 135 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 194 | || || || |||||||||||||| ||||| |||||| || | || | | || |||| Sbjct: 80924 cgtttcgtaaagcaatgaaaaaagctattgagttaactgaacaggcggggacaaaaggag 80865 Query: 195 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacg 240 | ||||| |||||||||| ||| ||| ||||||||||||||||| Sbjct: 80864 ttcaagtacaaattgcgggacgtatcgacggaaaagaaattgcacg 80819 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 267 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 326 ||||||| ||||| || || ||||||||||||||||| | |||| || |||||||||| | Sbjct: 80792 ttcccctacaaaccattcgagctaaaattgattattgttcctatacagttcgaactattt 80733 Query: 327 atggagtattaggtgtaaaaatttggatatt 357 |||| |||||||| | ||| |||||||||| Sbjct: 80732 atggcgtattagggatcaaagtttggatatt 80702 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 ||||||||||||||||||| |||||||| Sbjct: 80571 aattgctatgcttagtgtgcgactcgtt 80544
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 72 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 131 ||||||||||| | ||||| ||||||||||||| |||||| |||||||| ||||||| Sbjct: 19120 aaccttatagaaaccctaatattcttgcagaatttatagccgatcaattaaagaatagag 19061 Query: 132 tttcattccgaaaggcaatgaaaaaagccattgaattaac 171 |||| || |||| ||||||||||||| ||||||||||| Sbjct: 19060 tttcttttagaaaaacaatgaaaaaagctattgaattaac 19021 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 502 taatataattgctatgcttagtgtgtgactcgtt 535 |||| ||||||||||||||||||||||||||||| Sbjct: 18669 taatttaattgctatgcttagtgtgtgactcgtt 18636
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| |||||||| |||| |||||| |||||||| ||| |||||||||| |||||| Sbjct: 87582 cctaatattcttgccgaatttatagccggacaattaaagaatcgagtttcatttcgaaag 87523 Query: 146 gcaatgaaaaaagccattgaattaact 172 ||||||||||| || |||||||||||| Sbjct: 87522 gcaatgaaaaaggctattgaattaact 87496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||| ||||||| ||| | |||||||||||||||| |||||||| | |||||| Sbjct: 87378 aaaattgagtattgctcttatagagttcgaactatctatggggtattaggaatcaaaatt 87319 Query: 350 tggatattcgtagacgaagaataa 373 |||||||| |||||||||||||| Sbjct: 87318 tggatatttatagacgaagaataa 87295 Score = 65.9 bits (33), Expect = 1e-07 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 468 ttctataagatttaatgaaaatt-gataaatcatttaatataattgctatgcttagtgtg 526 ||||||||| || ||| |||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 87183 ttctataaggttaaataaaaatttgattgatcatttgatataattgctatgcttagtgtg 87124 Query: 527 tgactcgtt 535 |||||||| Sbjct: 87123 cgactcgtt 87115
>gb|AY775230.1| Heterosmilax japonica voucher Fu010807 rpl16 gene, intron; chloroplast Length = 1182 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 1010 atttaatataattgctatgcttagtgtgtgactcgtta 973 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 894 actaataaccaacttattgcttcgta 869
>gb|AY775229.1| Smilax tsinchengshanensis voucher Fu20013 rpl16 gene, intron; chloroplast Length = 1175 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 1004 atttaatataattgctatgcttagtgtgtgactcgtta 967
>gb|AY775228.1| Smilax biltmoreana voucher NY83199 rpl16 gene, intron; chloroplast Length = 1147 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 976 atttaatataattgctatgcttagtgtgtgactcgtta 939 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 861 actaataaccaacttattgcttcgta 836
>gb|AY775227.1| Smilax herbacea voucher NYKC9967 rpl16 gene, intron; chloroplast Length = 1167 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 995 atttaatataattgctatgcttagtgtgtgactcgtta 958 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 880 actaataaccaacttattgcttcgta 855
>gb|AY775223.1| Smilax riparia var. acuminata voucher Fu92105 rpl16 gene, intron; chloroplast Length = 1140 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 965 atttaatataattgctatgcttagtgtgtgactcgtta 928 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 850 actaataaccaacttattgcttcgta 825
>gb|AY775221.1| Smilax riparia voucher Fu99914 rpl16 gene, intron; chloroplast Length = 1170 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 999 atttaatataattgctatgcttagtgtgtgactcgtta 962
>gb|AY775219.1| Smilax riparia voucher Fu99902 rpl16 gene, intron; chloroplast Length = 1183 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 1012 atttaatataattgctatgcttagtgtgtgactcgtta 975 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 897 actaataaccaacttattgcttcgta 872
>gb|AY775217.1| Smilax riparia voucher Fu912691 rpl16 gene, intron; chloroplast Length = 1158 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 986 atttaatataattgctatgcttagtgtgtgactcgtta 949 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 871 actaataaccaacttattgcttcgta 846
>gb|AY775216.1| Smilax riparia voucher Fu96001 rpl16 gene, intron; chloroplast Length = 1129 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 959 atttaatataattgctatgcttagtgtgtgactcgtta 922 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 842 actaataaccaacttattgcttcgta 817
>gb|AY775215.1| Smilax riparia voucher Fu91091 rpl16 gene, intron; chloroplast Length = 1150 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 984 atttaatataattgctatgcttagtgtgtgactcgtta 947 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 863 actaataaccaacttattgcttcgta 838
>gb|AY775214.1| Smilax riparia voucher Fu010880 rpl16 gene, intron; chloroplast Length = 1134 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 963 atttaatataattgctatgcttagtgtgtgactcgtta 926 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 841 actaataaccaacttattgcttcgta 816
>gb|AY775224.1| Smilax riparia var. acuminata voucher Li00726 rpl16 gene, intron; chloroplast Length = 1149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 497 tcatttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 980 tcatttaatataattgctatgcttagtgtgtgacccgtta 941 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 858 actaataaccaacttattgcttcgta 833
>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence Length = 128458 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| ||||||| |||||||| |||||| ||||||| | || Sbjct: 26310 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcatttaggaaa 26251 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 ||||| |||||||| ||||||||| || || | || || || ||||| ||||| || Sbjct: 26250 gcaatcaaaaaagctattgaattagctgaacagacatgtacaaaaggagttcaagtacaa 26191 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 248 |||||||| ||| ||| ||||||||||||||| ||| ||||| Sbjct: 26190 attgcgggacgtatcgacggaaaagaaattgcatgtgtcgaat 26148
>gb|AY775220.1| Smilax riparia voucher Fu99909 rpl16 gene, intron; chloroplast Length = 1181 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||| ||||||||||||||||||||||||||||||| Sbjct: 1009 atttaagataattgctatgcttagtgtgtgactcgtta 972 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 886 actaataaccaacttattgcttcgta 861
>gb|AY540609.1| Sedum palmeri ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1196 catttgatataattgctatgcttagtgtgtgactcgtt 1159 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1361 aaaatttggatattagtagacgaagtataa 1332
>gb|AY540608.1| Sedum corynephyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1195 catttgatataattgctatgcttagtgtgtgactcgtt 1158 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1360 aaaatttggatatttgtagacgaagtataa 1331
>gb|AY540607.1| Sedum clavatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1362 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1194 catttgatataattgctatgcttagtgtgtgactcgtt 1157 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540606.1| Pachyphytum viride ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1199 catttgatataattgctatgcttagtgtgtgactcgtt 1162 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540605.1| Graptopetalum superbum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1365 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1191 catttgatataattgctatgcttagtgtgtgactcgtt 1154 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1356 aaaatttggatatttgtagacgaagtataa 1327
>gb|AY540604.1| Graptopetalum suaveolens ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1130 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 956 catttgatataattgctatgcttagtgtgtgactcgtt 919 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1121 aaaatttggatatttgtagacgaagtataa 1092
>gb|AY540603.1| Graptopetalum saxifragoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1199 catttgatataattgctatgcttagtgtgtgactcgtt 1162 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540599.1| Graptopetalum paraguayense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1205 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1030 catttgatataattgctatgcttagtgtgtgactcgtt 993 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1195 aaaatttggatatttgtagacgaagtataa 1166
>gb|AY540598.1| Graptopetalum pachyphyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1378 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1204 catttgatataattgctatgcttagtgtgtgactcgtt 1167 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1369 aaaatttggatatttgtagacgaagtataa 1340
>gb|AY540597.1| Graptopetalum mendozae ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1189 catttgatataattgctatgcttagtgtgtgactcgtt 1152 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1354 aaaatttggatatttgtagacgaagtataa 1325
>gb|AY540596.1| Graptopetalum marginatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1368 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1200 catttgatataattgctatgcttagtgtgtgactcgtt 1163 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1359 aaaatttggatatttgtagacgaagtataa 1330
>gb|AY540593.1| Graptopetalum glassii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1360 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1186 catttgatataattgctatgcttagtgtgtgactcgtt 1149 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1351 aaaatttggatatttgtagacgaagtataa 1322
>gb|AY540592.1| Graptopetalum fruticosum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1188 catttgatataattgctatgcttagtgtgtgactcgtt 1151 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540591.1| Graptopetalum filiferum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1045 catttgatataattgctatgcttagtgtgtgactcgtt 1008
>gb|AY540590.1| Graptopetalum craigii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1364 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1190 catttgatataattgctatgcttagtgtgtgactcgtt 1153 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540589.1| Graptopetalum bernalense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1190 catttgatataattgctatgcttagtgtgtgactcgtt 1153 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540588.1| Graptopetalum bartramii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1123 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 949 catttgatataattgctatgcttagtgtgtgactcgtt 912 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1114 aaaatttggatatttgtagacgaagtataa 1085
>gb|AY540587.1| Graptopetalum amethystinum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1187 catttgatataattgctatgcttagtgtgtgactcgtt 1150 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1352 aaaatttggatatttgtagacgaagtataa 1323
>gb|AY540582.1| Cremnophila linguifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 498 catttaatataattgctatgcttagtgtgtgactcgtt 535 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1196 catttgatataattgctatgcttagtgtgtgactcgtt 1159 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 345 aaatttggatattcgtagacgaagaataa 373 ||||||||||||| |||||||||| |||| Sbjct: 1360 aaatttggatatttgtagacgaagtataa 1332
>dbj|AB087104.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00002 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 287 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 346 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 347 atttggatatt 357 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087103.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00001 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 287 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 346 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 347 atttggatatt 357 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087086.1| Glycine cyrtoloba chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 267 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 326 |||| |||||||| || || || |||||||||||||| |||||| || |||||||||| | Sbjct: 44 ttcctctccaaaccattcgagcgaaaattgattattgttgctatacagttcgaactattt 103 Query: 327 atggagtattaggtgtaaaaatttggatatt 357 |||| || ||||| | ||| |||||||||| Sbjct: 104 atggggttttagggatcaaagtttggatatt 134
>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16 Length = 2064 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 505 tataattgctatgcttagtgtgtgactcgtt 535 ||||||||||||||||||||||||||||||| Sbjct: 64 tataattgctatgcttagtgtgtgactcgtt 94
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 62 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 108
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 111
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 59 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 105
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 57 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 103
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 95
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 104
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 66
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 14 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 60
>gb|AY775226.1| Smilax nipponica voucher Fu91277 rpl16 gene, intron; chloroplast Length = 1166 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 |||||||| |||||| |||||||||||||||||||||| Sbjct: 996 atttaatagaattgccatgcttagtgtgtgactcgtta 959
>gb|AY775222.1| Smilax riparia voucher Fu99904 rpl16 gene, intron; chloroplast Length = 1144 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtta 536 ||||||||||||||| |||||||||||||||| ||||| Sbjct: 997 atttaatataattgcaatgcttagtgtgtgacccgtta 960 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 actaataaccaacctattgcttcgta 616 ||||||||||||| |||||||||||| Sbjct: 880 actaataaccaacttattgcttcgta 855
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 749
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 99
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 62 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 108
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 74 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 120
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 91 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 137
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 111
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 69 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 115
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 74 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 120
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 69 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 115
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 112
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 85 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 131
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 130
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 91 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 137
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 129
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 81 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 127
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 130
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 130
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 136
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 136
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 136
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 135
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 85 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 131
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 135
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 135
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 68 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 114
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 112
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 111
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 112
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 61 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 107
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 112
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 60.0 bits (30), Expect = 9e-06 Identities = 47/53 (88%), Gaps = 6/53 (11%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 58.0 bits (29), Expect = 4e-05 Identities = 46/52 (88%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 565 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 58 ttagtaattatagaaaatta------actaataaccaacctattgcttcgta 103
>gb|AY540601.1| Graptopetalum pusillum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1375 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 499 atttaatataattgctatgcttagtgtgtgactcgtt 535 |||| ||| |||||||||||||||||||||||||||| Sbjct: 1200 atttgatagaattgctatgcttagtgtgtgactcgtt 1164 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaag 368 |||||||||||||| |||||||||| Sbjct: 1366 aaaatttggatatttgtagacgaag 1342
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 58.0 bits (29), Expect = 4e-05 Identities = 46/52 (88%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 565 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 91 ttagtaattatagaaaatta------actaataaccaacctattgcttcgta 136
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 58.0 bits (29), Expect = 4e-05 Identities = 46/52 (88%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 565 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 41 ttagtaattatagaaaatta------actaataaccaacctattgcttcgta 86
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 58.0 bits (29), Expect = 4e-05 Identities = 46/52 (88%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 565 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 92 ttagtaattatagaaaatta------actaataaccaacctattgcttcgta 137
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 58.0 bits (29), Expect = 4e-05 Identities = 46/52 (88%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 565 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 68 ttagtaattatagaaaatta------actaataaccaacctattgcttcgta 113
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 63 cttagtaattatagaaaattaactaata 90
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaata 85
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 28 cttagtaattatagaaaattaactaata 55
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 56 cttagtaattatagaaaattaactaata 83
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaata 85
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaata 85
>gb|AY540600.1| Graptopetalum pentandrum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1283 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 504 atataattgctatgcttagtgtgtgactcgtt 535 ||||||| |||||||||||||||||||||||| Sbjct: 1103 atataatggctatgcttagtgtgtgactcgtt 1072 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 344 aaaatttggatattcgtagacgaagaataa 373 |||||||||||||| |||||||||| |||| Sbjct: 1274 aaaatttggatatttgtagacgaagtataa 1245
>gb|AY181618.1| Pachycereus marginatus isolate sa1372 rpl16 gene, partial sequence; chloroplast gene for chloroplast product Length = 1238 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1120 aattgctatgcttagtgtgtgactcgtt 1093
>gb|AY181616.1| Cephalocereus senilis isolate tt529 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1220 aattgctatgcttagtgtgtgactcgtt 1193
>gb|AY181615.1| Pachycereus pecten-aboriginum isolate tt535 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1266 aattgctatgcttagtgtgtgactcgtt 1239
>gb|AY181614.1| Pachycereus weberi isolate tt532 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1270 aattgctatgcttagtgtgtgactcgtt 1243
>gb|AY181613.1| Pachycereus schottii isolate tt474 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1428 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1274 aattgctatgcttagtgtgtgactcgtt 1247
>gb|AY181612.1| Stenocereus fricii isolate tt384 ribosomal protein L16 (rpl16) gene, complete cds; chloroplast gene for chloroplast product Length = 1439 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1279 aattgctatgcttagtgtgtgactcgtt 1252
>gb|AY181610.1| Stenocereus eichlamii isolate sa1363 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1273 aattgctatgcttagtgtgtgactcgtt 1246
>gb|AY181609.1| Pachycereus militaris isolate sa1339 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1471 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1280 aattgctatgcttagtgtgtgactcgtt 1253
>gb|AY181608.1| Escontria chiotilla isolate tt370 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1289 aattgctatgcttagtgtgtgactcgtt 1262
>gb|AY181607.1| Myrtillocactus schenckii isolate tt500 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1288 aattgctatgcttagtgtgtgactcgtt 1261
>gb|AY181605.1| Pachycereus grandis isolate tt534 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1423 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1282 aattgctatgcttagtgtgtgactcgtt 1255
>gb|AY181604.1| Stenocereus martinezii isolate ha1654 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1450 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1292 aattgctatgcttagtgtgtgactcgtt 1265
>gb|AY181603.1| Pachycereus hollianus isolate sa1373 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1228 aattgctatgcttagtgtgtgactcgtt 1201
>gb|AY181602.1| Pachycereus fulviceps isolate sa1371 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1430 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1281 aattgctatgcttagtgtgtgactcgtt 1254
>gb|AY181601.1| Pachycereus gatesii ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1442 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1282 aattgctatgcttagtgtgtgactcgtt 1255
>gb|AY181598.1| Pachycereus lepidanthus isolate tcsn ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1242 aattgctatgcttagtgtgtgactcgtt 1215
>gb|AY181597.1| Neobuxbaumia polylopha isolate tt530 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1461 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1293 aattgctatgcttagtgtgtgactcgtt 1266
>gb|AY181596.1| Neobuxbaumia scoparia ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1451 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1293 aattgctatgcttagtgtgtgactcgtt 1266
>gb|AY181595.1| Neobuxbaumia euphorbioides isolate jhsn ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1453 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1295 aattgctatgcttagtgtgtgactcgtt 1268
>gb|AY181594.1| Neobuxbaumia multiareolata isolate tt531 ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 1439 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1298 aattgctatgcttagtgtgtgactcgtt 1271
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 77692 aattgctatgcttagtgtgtgactcgtt 77665 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 147 caatgaaaaaagccattgaattaactaaaaaagcagatataa 188 ||||||||||||||||||||||| | ||||||| | |||||| Sbjct: 77969 caatgaaaaaagccattgaattagcaaaaaaaggaaatataa 77928 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 aagaagaaattctacctctttctata 474 |||||||||||||||||| ||||||| Sbjct: 91160 aagaagaaattctacctccttctata 91185
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 1837 aattgctatgcttagtgtgtgactcgtt 1864 Score = 56.0 bits (28), Expect = 1e-04 Identities = 211/272 (77%) Strand = Plus / Plus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| ||| |||| | ||| || ||||| ||||| Sbjct: 1401 cctaatattcttgcagaatttatagccggacaactaaagagtagggtatcatttcgaaaa 1460 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| || |||||||| || |||| |||| || ||| | || | || Sbjct: 1461 gcaatgaaaaaagctatcgaattaaccgaacaagctgatacaaaaggaattcaaatccaa 1520 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||||||| ||||| || | | || || Sbjct: 1521 attgccggccgtatcgatggaaaagaaattgcacgtatcgaatggataagagaaggtagg 1580 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || ||||| ||||| |||||||| |||| | ||||||| ||| Sbjct: 1581 gttcccctacaaacgattcgcgcaaaaatcgattattgtgcctataccgttcgaacaatc 1640 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 ||||| ||||| || |||||||||||||||| Sbjct: 1641 tatggcgtattggggataaaaatttggatatt 1672
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 56.0 bits (28), Expect = 1e-04 Identities = 211/272 (77%) Strand = Plus / Minus Query: 86 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 145 ||||| ||||||||||||| |||||| ||| |||| | ||| || ||||| ||||| Sbjct: 81541 cctaatattcttgcagaatttatagccggacaactaaagagtagggtatcatttcgaaaa 81482 Query: 146 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 205 |||||||||||||| || |||||||| || |||| |||| || ||| | || | || Sbjct: 81481 gcaatgaaaaaagctatcgaattaaccgaacaagctgatacaaaaggaattcaaatccaa 81422 Query: 206 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 265 ||||| || ||| ||| |||||||||||||||||| ||||| || | | || || Sbjct: 81421 attgccggccgtatcgatggaaaagaaattgcacgtatcgaatggataagagaaggtagg 81362 Query: 266 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 325 ||||||| ||||| || ||||| ||||| |||||||| |||| | ||||||| ||| Sbjct: 81361 gttcccctacaaacgattcgcgcaaaaatcgattattgtgcctataccgttcgaacaatc 81302 Query: 326 tatggagtattaggtgtaaaaatttggatatt 357 ||||| ||||| || |||||||||||||||| Sbjct: 81301 tatggcgtattggggataaaaatttggatatt 81270 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 508 aattgctatgcttagtgtgtgactcgtt 535 |||||||||||||||||||||||||||| Sbjct: 81105 aattgctatgcttagtgtgtgactcgtt 81078
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 70 cttagtaattatagaaaattaactaata 97
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 48 cttagtaattatagaaaattaactaata 75
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 671 attgctatgcttagtgtgtgactcgtta 644 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 533
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 672 attgctatgcttagtgtgtgactcgtta 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 533
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 671 attgctatgcttagtgtgtgactcgtta 644 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 533
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 528
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 665 attgctatgcttagtgtgtgactcgtta 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 573 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 527
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 attgctatgcttagtgtgtgactcgtta 536 |||||||||||||||||||||||||||| Sbjct: 665 attgctatgcttagtgtgtgactcgtta 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%), Gaps = 6/53 (11%) Strand = Plus / Minus Query: 564 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgta 616 ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 573 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgta 527
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 71 cttagtaattatagaaaattaactaata 98
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 85 cttagtaattatagaaaattaactaata 112
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaattaactaata 116
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 cttagtaattatagaaaattaactaata 591 |||||||||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaattaactaata 116
>dbj|AB087102.1| Glycine dolichocarpa chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 350 tggatatt 357 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087101.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00015-5-23 Length = 302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 350 tggatatt 357 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087100.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00008-2 Length = 302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 350 tggatatt 357 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087099.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00007-3 Length = 302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 350 tggatatt 357 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087098.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 339657 Length = 302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 290 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 349 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 350 tggatatt 357 |||||||| Sbjct: 126 tggatatt 133 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,308,405 Number of Sequences: 3902068 Number of extensions: 8308405 Number of successful extensions: 209521 Number of sequences better than 10.0: 552 Number of HSP's better than 10.0 without gapping: 558 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 206533 Number of HSP's gapped (non-prelim): 2873 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)