ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12l14 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 352 bits (904), Expect = 4e-97 Identities = 171/194 (88%), Positives = 179/194 (92%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKFEHPRHGSLGFLPRKR SRHRGKVK+FP+DD SK CHLT+F+GYKAGMTHIVREVE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVE 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 KPGSKLHKKETCEA GLVAYVKTPRGLR+LNSVWAQHLSE+VRRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYA++VRVIAHTQIRKMKGLKQKKAHL Sbjct: 121 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHL 180 Query: 564 MEIQINGGTIADKV 605 MEIQINGGTIADKV Sbjct: 181 MEIQINGGTIADKV 194
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 328 bits (841), Expect = 7e-90 Identities = 158/194 (81%), Positives = 171/194 (88%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DDQ+K C TAF+GYKAGMTHIVREVE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVE 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 KPGSKLHKKETCEA G+VAYVKTPRGLR+LN+VWAQHLSE+VRRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFT YA +YDS+ GKK IQ QLEKMKKYATV+RV+AHTQIRKMKGLKQKKAH+ Sbjct: 121 WAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHM 180 Query: 564 MEIQINGGTIADKV 605 MEIQINGGTIA KV Sbjct: 181 MEIQINGGTIAQKV 194
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 312 bits (799), Expect = 5e-85 Identities = 149/194 (76%), Positives = 168/194 (86%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD +K C LT+FLGYKAGMTHIVR+VE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVE 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 KPGSKLHKKETCEA G+V YVKTPRGLR+L +VWAQHLSE++RRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFT+Y+ K++++ GKK+IQ QLEKMKKY +V+RV+AHTQIRKMKGLKQKKAHL Sbjct: 121 WAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHL 180 Query: 564 MEIQINGGTIADKV 605 EIQINGG IA KV Sbjct: 181 NEIQINGGDIAKKV 194
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 267 bits (682), Expect = 2e-71 Identities = 132/194 (68%), Positives = 155/194 (79%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SH KFE PRHGSLGFLPRKR SR RGKVKAFP+DD SK HLTAFLGYKAGMTHIVR+++ Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK+HK+E EA G+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKN Sbjct: 61 RPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKYA KY + I +LE++KKY +VVRV+AHTQIRK L QKKAHL Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHL 177 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGG++ADKV Sbjct: 178 MEIQVNGGSVADKV 191
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 267 bits (682), Expect = 2e-71 Identities = 132/194 (68%), Positives = 155/194 (79%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SH KFE PRHGSLGFLPRKR SR RGKVKAFP+DD SK HLTAFLGYKAGMTHIVR+++ Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK+HK+E EA G+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKN Sbjct: 61 RPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKYA KY + I +LE++KKY +VVRV+AHTQIRK L QKKAHL Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHL 177 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGG++ADKV Sbjct: 178 MEIQVNGGSVADKV 191
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 266 bits (680), Expect = 3e-71 Identities = 126/194 (64%), Positives = 154/194 (79%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE EA G+V YV+TPRGLRT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY K+ D GKK+++ MKKY V+R+IAHTQ+R + L+QKKAHL Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHL 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGGT+A+K+ Sbjct: 180 MEIQVNGGTVAEKL 193
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 266 bits (680), Expect = 3e-71 Identities = 126/194 (64%), Positives = 154/194 (79%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE EA G+V YV+TPRGLRT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY K+ D GKK+++ MKKY V+R+IAHTQ+R + L+QKKAHL Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHL 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGGT+A+K+ Sbjct: 180 MEIQVNGGTVAEKL 193
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 264 bits (675), Expect = 1e-70 Identities = 126/194 (64%), Positives = 154/194 (79%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE EA G+V YV+TPRGLRT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY K+ + GKK+++ MKKY V+RVIAHTQ+R + L+QKKAHL Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGGT+A+K+ Sbjct: 180 MEIQVNGGTVAEKL 193
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 262 bits (670), Expect = 5e-70 Identities = 124/194 (63%), Positives = 153/194 (78%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE EA G+V YV+TPRGLRT +++A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY K+ GKK+++ MKKY V+RVIAHTQ+R + L+QKKAHL Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179 Query: 564 MEIQINGGTIADKV 605 ME+Q+NGGT+A+K+ Sbjct: 180 MEVQVNGGTVAEKL 193
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 261 bits (668), Expect = 8e-70 Identities = 125/194 (64%), Positives = 153/194 (78%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE A G+V YV+TPRGLRT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY K+ + GKK+++ MKKY V+RVIAHTQ+R + L+QKKAHL Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGGT+A+K+ Sbjct: 180 MEIQVNGGTVAEKL 193
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 261 bits (667), Expect = 1e-69 Identities = 126/195 (64%), Positives = 156/195 (80%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHGSL FLPRKR +RHRGKVK+FP+DD K HLTA +GYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PG+K+HKKE EA G+V Y++TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKYA K+ + G I +LE++KKY TVVRV+AHTQIRK LKQKKAH Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178 Query: 561 LMEIQINGGTIADKV 605 LMEIQ+NGG++ADKV Sbjct: 179 LMEIQVNGGSVADKV 193
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 259 bits (663), Expect = 3e-69 Identities = 128/195 (65%), Positives = 154/195 (78%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHGSL +LPRKR +RHRGKVK+FP+DD K HLTA +GYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PG+K HKKE EA GLV Y++TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKY K+ SD I +LE++KKY TVVRV+AHTQIRK LKQKKAH Sbjct: 121 NWYKSKKKAFTKYVKKH-SDNNGAAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178 Query: 561 LMEIQINGGTIADKV 605 LMEIQINGG++ADKV Sbjct: 179 LMEIQINGGSVADKV 193
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 255 bits (651), Expect = 8e-68 Identities = 122/195 (62%), Positives = 156/195 (80%), Gaps = 1/195 (0%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKFE PRHG+LGF PRKR +RH+GKVK+FP+DD+++K HLTAF+GYKAGMTH+VR++E Sbjct: 1 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLE 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 KPGSK+HKKE EA GLV YV+T +GL+T +VWAQHLS++ RRR YKN Sbjct: 61 KPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN 120 Query: 384 WCKSK-KKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 W KSK KKAFTKY +Y+++ GKK I+ L+ +KK +VVRVIAHTQ+ K+K L QKKAH Sbjct: 121 WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAH 179 Query: 561 LMEIQINGGTIADKV 605 ++EIQ+NGG+I +KV Sbjct: 180 VLEIQVNGGSIVEKV 194
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 251 bits (640), Expect = 1e-66 Identities = 122/195 (62%), Positives = 155/195 (79%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHGSLGFLPRKR + RG+VK+FP+D +SK LTAFLGYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PGSK+HK+E EA G+V YV+TPRGLR+L +VWA+HLSE+VRRRFYK Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKY+ KY D +++ +L ++KKYA+VVRV+AHTQI+K L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--QVERELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177 Query: 561 LMEIQINGGTIADKV 605 L EIQ+NGG+++DKV Sbjct: 178 LAEIQVNGGSVSDKV 192
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 250 bits (639), Expect = 2e-66 Identities = 120/194 (61%), Positives = 147/194 (75%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGS+GF P+KR RHRGKVKAFP+DD +K HLTAF+ +KAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 KPGSK++KKE EA G+V Y+ TPRG R +VWA+HLSED R RFYKN Sbjct: 61 KPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W SKKKAF K+A K+ + G+K I+ L KMKKY + +RVIAHTQ++ MK ++KKAH+ Sbjct: 121 WHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHI 179 Query: 564 MEIQINGGTIADKV 605 MEIQINGGT+A+KV Sbjct: 180 MEIQINGGTVAEKV 193
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 250 bits (639), Expect = 2e-66 Identities = 122/194 (62%), Positives = 146/194 (75%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHGS+ F P+KR +RHRGKVKAFP+DD SK HLT F+GYKAGMTHIVRE + Sbjct: 1 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK++KKE EA G V Y++TP GLR L +VWAQHLSE+ RRRFYKN Sbjct: 61 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTK + K+ D GKK I+ KM +Y V+RVIAH+QIR +K +QKKAH+ Sbjct: 121 WYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAHV 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGG+I DKV Sbjct: 180 MEIQLNGGSIEDKV 193
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 247 bits (631), Expect = 2e-65 Identities = 117/195 (60%), Positives = 147/195 (75%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRKF PRHG +GF P+KR +RG++KAFP+DD+SK HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 +KPGSK++KKE EA G+ YV TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + +RVIAHTQ++ ++ +QKKAH Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179 Query: 561 LMEIQINGGTIADKV 605 L+EIQ+NGGTI KV Sbjct: 180 LVEIQVNGGTIEQKV 194
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 246 bits (629), Expect = 3e-65 Identities = 117/195 (60%), Positives = 146/195 (74%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRKF PRHG +GF P+KR +RG++KAFP+DD SK HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 +KPGSK++KKE EA G+ Y+ TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + +RVIAHTQ++ ++ +QKKAH Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179 Query: 561 LMEIQINGGTIADKV 605 L+EIQINGGTI KV Sbjct: 180 LVEIQINGGTIEQKV 194
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 246 bits (629), Expect = 3e-65 Identities = 121/195 (62%), Positives = 153/195 (78%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHG LGFLPRKR + RG+VK+FP+DD+SK LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PGSK HK+E EA G+V YV+TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKY+ KY + EI+ +L ++KKYATVVRV+ HTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAH 177 Query: 561 LMEIQINGGTIADKV 605 L EIQ+NGG+I++KV Sbjct: 178 LAEIQLNGGSISEKV 192
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 244 bits (622), Expect = 2e-64 Identities = 117/195 (60%), Positives = 152/195 (77%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHG LGFLPRKR + RG+VK+FP+DDQ+K LT+FLGYKAGM+ IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PGSK HK+E EA G+V YV+TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFTKY+ KY + ++ +L ++KKYA+VVRV+ HTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177 Query: 561 LMEIQINGGTIADKV 605 L EIQ+NGG+++DKV Sbjct: 178 LAEIQLNGGSVSDKV 192
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 242 bits (618), Expect = 5e-64 Identities = 120/194 (61%), Positives = 150/194 (77%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRK+E PRHG LGFLPRKR + R +VKAFP+DD+SK LT+FLGYKAGMT IVR+++ Sbjct: 1 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PGSK HK+E EA G+V YV+TPRGLR+L +VWA+HLS++V+RRFYKN Sbjct: 61 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTKY+ KY D I+ +L ++KKYA+VVRV+ HTQIRK L QKKAHL Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHL 177 Query: 564 MEIQINGGTIADKV 605 EIQ+NGG+I++KV Sbjct: 178 AEIQLNGGSISEKV 191
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 235 bits (599), Expect = 9e-62 Identities = 114/194 (58%), Positives = 141/194 (72%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHG LGFLP KR RHRGKVK +PRDD S+ HLTAFLGYKAGMTH +REV Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PG K+ K+E EA G+V YV TPRGLR+ +++A+HLS++ RRRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTK ++ GKK++Q MKKY V+RVI HTQ+ K+ +QKKAH+ Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179 Query: 564 MEIQINGGTIADKV 605 MEIQ+NGGT+A+KV Sbjct: 180 MEIQLNGGTVAEKV 193
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 234 bits (597), Expect = 1e-61 Identities = 113/194 (58%), Positives = 141/194 (72%) Frame = +3 Query: 24 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 203 SHRKF PRHG LGFLP KR RHRGKVK +PRDD S+ HLTAFLGYKAGMTH +REV Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 204 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 383 +PG K+ K+E EA G+V YV TPRGLR+ +++A+HLS++ RRRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 384 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 563 W KSKKKAFTK ++ GKK++Q MKKY V+RVI HTQ+ K+ +QKKAH+ Sbjct: 121 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179 Query: 564 MEIQINGGTIADKV 605 ME+Q+NGGT+A+KV Sbjct: 180 MEVQLNGGTVAEKV 193
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 234 bits (597), Expect = 1e-61 Identities = 115/195 (58%), Positives = 150/195 (76%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 MSHRK+E PRHG LGFLPRKR + RG+VKAFP+DD+SK LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 ++PGSK HK+E EA G+V Y++TPRGLR+L +VWA+HLS++++RRFYK Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 NW KSKKKAFT+ + G I+ +L ++KKYA+VVRV+AHTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTQVPPPSTAQDG-AAIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAH 178 Query: 561 LMEIQINGGTIADKV 605 L EIQ+NGG++++KV Sbjct: 179 LAEIQLNGGSVSEKV 193
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 135 bits (340), Expect = 9e-32 Identities = 84/198 (42%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVR-E 197 MS RKF PRHGSL F PRKR R AFP DD+S+ HLT F+ YKAGMTH+VR + Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60 Query: 198 VEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFY 377 + +K +E +A G+V Y KT GLR L V A ++S+ V RR + Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120 Query: 378 KNWCKSKKKA--FTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQK 551 N SK+ A F K ++ + ++E +K+ A VRV+ TQ +KGL K Sbjct: 121 GNRYASKESAGQFCKGSV----------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170 Query: 552 KAHLMEIQINGGTIADKV 605 KAH+ EIQ+NGG+I++KV Sbjct: 171 KAHIAEIQVNGGSISEKV 188
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 84.0 bits (206), Expect = 3e-16 Identities = 60/190 (31%), Positives = 87/190 (45%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 + PR GS+ F PRKR +R +VK++P+ D+ L A GYKAGMTH++ + Sbjct: 3 RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEP---GLLALAGYKAGMTHVMMVDNQKN 59 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 S E + Y KT RGL+TL V A +D+RR+ Sbjct: 60 SPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK------- 112 Query: 393 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 572 T A YD +A ++I+ +E Y VRVI HT R + + +KK + E Sbjct: 113 -----LTPPADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFEC 162 Query: 573 QINGGTIADK 602 + G T +K Sbjct: 163 GLGGKTPEEK 172
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 83.6 bits (205), Expect = 4e-16 Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 2/193 (1%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GSL F PRKR + K++++P D KK L AF YKAG TH + P Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 S + +E G+ AY KT +GL+ L VWA+ +++ R Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGR-------- 112 Query: 393 SKKKAFTKYALKYDSDAGKKEIQM--QLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLM 566 K TK K+EI+ L+ + + +RVI HT K G+ +KK ++ Sbjct: 113 --KLTVTK----------KEEIKTVESLDAVLEKTVDLRVIVHTN-PKTTGIPKKKPEVV 159 Query: 567 EIQINGGTIADKV 605 EI++ G ++A+K+ Sbjct: 160 EIRVGGSSVAEKL 172
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 83.2 bits (204), Expect = 5e-16 Identities = 66/190 (34%), Positives = 90/190 (47%), Gaps = 2/190 (1%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 M RK PR GSLGF PRKR SR +VK +P D K L AFLGY+AGMTH+ Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTP-RGLRTLNSVWAQHLSE-DVRRRF 374 ++PG KE + Y P RG +L WAQ E +++RR Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119 Query: 375 YKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKK 554 +D+D K ++ +L+K A VR+IA +Q + GL +KK Sbjct: 120 -------------STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKK 162 Query: 555 AHLMEIQING 584 L+EI++ G Sbjct: 163 PDLLEIKVGG 172
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 79.3 bits (194), Expect = 8e-15 Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 1/196 (0%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 M HRK PR GS G PRKR K +P + K+ L F+GYKAGMTH+ Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNL-KEPKLLGFIGYKAGMTHVYMID 59 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFY 377 +KP S + KE L AY +G L L WA F Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWA---------NFE 110 Query: 378 KNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKA 557 + K K+ T +LK DS K+++ + ++K T +R++ TQ + L +K+ Sbjct: 111 EGSLKYLKRKIT--SLKVDSSKMKEKLDL-IQKNLNNITYMRLLVSTQPWLVPSLGKKRP 167 Query: 558 HLMEIQINGGTIADKV 605 ++EIQI GG+I D++ Sbjct: 168 EIVEIQIGGGSIQDQL 183
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 78.2 bits (191), Expect = 2e-14 Identities = 54/187 (28%), Positives = 80/187 (42%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 PR GS+GF PRKR + ++P DD + L F GYKAGMTH+V +K + Sbjct: 6 PRKGSMGFSPRKRAESEVPRFNSWPADDG--EVGLQGFAGYKAGMTHVVLVDDKANAPTE 63 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 404 ET + Y TP G + L VWA E + R Sbjct: 64 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR------------ 111 Query: 405 AFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQING 584 L + G + ++ ++ A + RVI HT G+ +K +ME ++ G Sbjct: 112 -----TLSVPDEGGDTDELIEALDTEEIADI-RVITHTVPGDTAGVPKKNPDVMETRVGG 165 Query: 585 GTIADKV 605 GT+AD++ Sbjct: 166 GTLADRL 172
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 76.3 bits (186), Expect = 7e-14 Identities = 54/187 (28%), Positives = 82/187 (43%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 PR GSLGF PRKR + + ++P DD + F GYKAGMTH+V ++P S Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQP--GVQGFAGYKAGMTHVVLVNDEPNSPRE 63 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 404 E L AY TP G R L VW ++ R Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 113 Query: 405 AFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQING 584 +D DA +++I+ E +R+I HT + + +KK +ME ++ G Sbjct: 114 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 168 Query: 585 GTIADKV 605 G+++D++ Sbjct: 169 GSVSDRL 175
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 75.5 bits (184), Expect = 1e-13 Identities = 57/195 (29%), Positives = 92/195 (47%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 M HRK PR GS G PRKR S +++P QS + L F+GYK GM+HI Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTI-QSNEPKLLGFVGYKVGMSHIFMID 59 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 380 +KP S + KE + AYV P+G T + + +SED+ + Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLI-- 117 Query: 381 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 560 +++ T+ LK D + K ++ ++ +RV+ TQ + + L +KK Sbjct: 118 -----QQRKVTR--LKIDKEKMKGKLD-EINNKLNDILYLRVLIATQPKLVPSLGKKKPE 169 Query: 561 LMEIQINGGTIADKV 605 ++E+Q+ GG I ++ Sbjct: 170 IVEVQVGGGDIKSQL 184
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 73.2 bits (178), Expect = 6e-13 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 2/202 (0%) Frame = +3 Query: 3 GKEGRRMSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMT 182 G+ GRR R PR GSL F PRKR SR +++++P ++ + + F GYKAGMT Sbjct: 2 GRGGRRNPGR----PRRGSLAFSPRKRASRPVPRIRSWPDEE---RVRVQGFAGYKAGMT 54 Query: 183 HIVREVEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDV 362 H + + P S +E + AY TP G R + WA+ + E++ Sbjct: 55 HAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE-IPEEL 113 Query: 363 RRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATV--VRVIAHTQIRKMK 536 + FT + D +AG + ++E++ V +RVI TQ +K Sbjct: 114 ----------EMDRVFT---VPKDGEAGDLD---KIEELVDEGIVEEIRVIVATQPKK-A 156 Query: 537 GLKQKKAHLMEIQINGGTIADK 602 G+ +KK +ME +I G + ++ Sbjct: 157 GVPKKKPDVMEYRIGGKDVRER 178
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 70.5 bits (171), Expect = 4e-12 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 1/188 (0%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 PR GSL F PRKR R +++++P +D + L AF YKAGM+H + + P S Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDTVR---LQAFPVYKAGMSHAFIKEDNPKSPNA 64 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFYKNWCKSKK 401 +E + Y + R L TL VWA +L +++ R+ Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERK---------- 114 Query: 402 KAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQIN 581 +K +K ++ LE +K VRV+ HT K+ L +KK ++EI+I Sbjct: 115 -------IKLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEIRIG 165 Query: 582 GGTIADKV 605 G I +++ Sbjct: 166 GKDIEERL 173
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 70.1 bits (170), Expect = 5e-12 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 2/186 (1%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K+ PR GSL F PRKR +++A+P D + + F GYKAGMTH+V ++ Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECD---RVRMQGFAGYKAGMTHVVMIDDRKN 58 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 S + +E + Y KT G++ VW+ +L + + RR Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL------ 112 Query: 393 SKKKAFTKYALKYDSDAGKKEIQMQLEK--MKKYATVVRVIAHTQIRKMKGLKQKKAHLM 566 + KKE ++ K ++ A+ VRV+ +TQ + G+ +K +M Sbjct: 113 ---------------NLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVM 157 Query: 567 EIQING 584 E +I G Sbjct: 158 EHRIGG 163
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 68.9 bits (167), Expect = 1e-11 Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 2/192 (1%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GSL + PRKR +++++P+D + + + F GYKAGMTHI+ + PG Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSEVR---MLGFAGYKAGMTHILMIDDSPG 59 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 KE G+ AY + GL T VW L ++V RR Sbjct: 60 -LTKGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRI------ 112 Query: 393 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATV--VRVIAHTQIRKMKGLKQKKAHLM 566 K K Y+ +A + ++ QLE + + VR++ HTQ + GLK KK +M Sbjct: 113 ---KTLPK---NYNEEAFQAKLG-QLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVM 163 Query: 567 EIQINGGTIADK 602 E I G + K Sbjct: 164 EYAIGGDDVKAK 175
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 68.2 bits (165), Expect = 2e-11 Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 8/197 (4%) Frame = +3 Query: 21 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 200 M HRK PR GS G PRKR S + +P+ + S+ L F+GYK GMTH+ Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SQNPKLLGFVGYKVGMTHVFMID 59 Query: 201 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSE--DVRRR 371 + P S + KE L AY +G + W+ + D+ RR Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119 Query: 372 FY--KNWCK---SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMK 536 + ++ K SKKK ++ K D I+ L+++ + R++ TQ RK+ Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLDL------IKSNLDRIVYF----RLLVSTQPRKIP 169 Query: 537 GLKQKKAHLMEIQINGG 587 L +K L+EIQI GG Sbjct: 170 SLGKKAPDLVEIQIGGG 186
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 62.4 bits (150), Expect = 1e-09 Identities = 55/192 (28%), Positives = 78/192 (40%), Gaps = 2/192 (1%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GS+G PRKR + +V+ +P + K L F YKAGM H V ++P Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRG--LRTLNSVWAQHLSEDVRRRFYKNW 386 S L+ KE +A G Y P R + VWA L + + R Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHR------ 116 Query: 387 CKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLM 566 K D D K++ E+ + A VR + TQ + G+ +K L+ Sbjct: 117 -------VLTLPEKLDVDKQLKKV----EEFRDVAVDVRALVATQ-PHLSGIGKKTPELL 164 Query: 567 EIQINGGTIADK 602 EI I G D+ Sbjct: 165 EIPIGGVPSVDE 176
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 61.6 bits (148), Expect = 2e-09 Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 9/199 (4%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GSL F PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 + KE G+ AY + GL T V + D Y K Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEV----IVPDFELDNYTPSKK 114 Query: 393 SKKKAFTKYAL------KYDSDAGKKEIQMQ---LEKMKKYATVVRVIAHTQIRKMKGLK 545 K + FT Y D ++E + + LE M K +V V A + Sbjct: 115 GKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGALEDMIKEGEIVEVRALVSTQPWVIKL 174 Query: 546 QKKAHLMEIQINGGTIADK 602 +KK +ME I G ++ +K Sbjct: 175 KKKPEVMEYAIGGTSVEEK 193
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 60.5 bits (145), Expect = 4e-09 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 12/202 (5%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GSL F PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWC- 389 + KE G+ AY + GL T V D N+ Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELD-------NYVS 111 Query: 390 -KSKKKAFTKYAL----------KYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMK 536 K+K + FT Y L Y D ++++ LE M K +V V A + Sbjct: 112 KKAKGRKFTFYQLLKRRIATLPKNYTKDDFEQKLG-NLEDMIKEGEIVEVRALVATQPWV 170 Query: 537 GLKQKKAHLMEIQINGGTIADK 602 +KK +ME I G ++ +K Sbjct: 171 IKLKKKPEVMEYAIGGTSVEEK 192
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 59.7 bits (143), Expect = 6e-09 Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 2/188 (1%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 P+ GSL F PRKR H + +A+P K L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDTKNSLTQ 64 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 404 E + AY + G + + VWA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR----------- 113 Query: 405 AFTKYALKYDSDAGKKEIQMQLEKMKKYATV--VRVIAHTQIRKMKGLKQKKAHLMEIQI 578 + + + E + K+ + V VR + +T + + G+ +K +ME I Sbjct: 114 ------IPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIMESGI 167 Query: 579 NGGTIADK 602 + + K Sbjct: 168 SARDLGTK 175
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 58.9 bits (141), Expect = 1e-08 Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 7/197 (3%) Frame = +3 Query: 33 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 212 K PR GSLGF PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 213 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 392 + KE G+ AY GL T V D + Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118 Query: 393 SKKKAFTKYALKYDSDAGKKEIQM-------QLEKMKKYATVVRVIAHTQIRKMKGLKQK 551 K F K + + K Q QLE M K +V V A + +K Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQLEDMIKEGEIVDVRAIVATQPWVIKLKK 178 Query: 552 KAHLMEIQINGGTIADK 602 K +ME I G ++ +K Sbjct: 179 KPEVMEYAIGGTSVEEK 195
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 56.6 bits (135), Expect = 5e-08 Identities = 43/186 (23%), Positives = 74/186 (39%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 P+ GSL F PRKR H + +A+P K L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDIKNSLTQ 64 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 404 E + AY + G + + WA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRI---------- 114 Query: 405 AFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQING 584 + G + I +E+ + + +R + +T + + G+ +K +ME I+ Sbjct: 115 ---PIPAAGNQAEGLENIGKLIEEGR--VSDIRAVTYTLPKSLTGVPKKVPDIMESGISA 169 Query: 585 GTIADK 602 + K Sbjct: 170 KDLGAK 175
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 55.1 bits (131), Expect = 2e-07 Identities = 53/187 (28%), Positives = 80/187 (42%) Frame = +3 Query: 45 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 224 PR GS+GF PRKR SR ++K +P+ ++ K AF YK GMTH + + G ++ Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKP---LAFAAYKVGMTHTILNIN--GERVF 63 Query: 225 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 404 T G AY K L+ ++S++ L + V R+ K Sbjct: 64 TPVT-----VLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110 Query: 405 AFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQING 584 LK + KKE Q A V++I TQ K+K +K + +I I G Sbjct: 111 ------LKNYNFEEKKE---QFLSKADNADEVKIIVSTQPWKIK--LKKTPEIFDIPIGG 159 Query: 585 GTIADKV 605 + K+ Sbjct: 160 SDVNKKL 166
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 40.8 bits (94), Expect = 0.003 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 3/185 (1%) Frame = +3 Query: 42 HPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKL 221 H R GS+ + PR R +++++P + S + F G+K GMTH+ Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHV----------- 52 Query: 222 HKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRF---YKNWCK 392 E + V ++ P L+ + + ED Y+ W + Sbjct: 53 ---EMVDYRKTSVTAGQPIFVPVTVIEVP----PLDVIGIRLYDEDEEGNMVVVYEKWTQ 105 Query: 393 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 572 + K K + KE++ + + YA VR+I T+ + + G+ KK + E+ Sbjct: 106 NLDKELFKKITTF------KEVK-EKPVPETYAD-VRLIVATRNKDVPGIPSKKPEIFEL 157 Query: 573 QINGG 587 +I GG Sbjct: 158 RIGGG 162
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 40.8 bits (94), Expect = 0.003 Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 1/183 (0%) Frame = +3 Query: 42 HPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKL 221 H R GS+ + PR R K++++P K + F G+K GMTH+ + S Sbjct: 6 HSRRGSMAYYPRVRAKSVDPKIRSWPEIKGEVK--VQGFAGFKVGMTHVEMIDYRKKSVT 63 Query: 222 HKKETCEAXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFYKNWCKSK 398 + G Y + G L + WA+ L +++ R+ + K Sbjct: 64 AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRKI----PEIK 119 Query: 399 KKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQI 578 K A Y+ VR+I T+ + + G+ KK + E++I Sbjct: 120 KVAERDPPESYED--------------------VRIIVATRNKDVPGIPSKKPEIFELRI 159 Query: 579 NGG 587 GG Sbjct: 160 GGG 162
>ARRC_XENLA (P51483) Arrestin-C (Cone arrestin)| Length = 387 Score = 33.5 bits (75), Expect = 0.49 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = -1 Query: 245 SLTCLLLVQLGTRLLDLTHNVSH------ASLVAKEGSEVAFLGLVISGESLHLSAVARA 84 SLT LL R L L + H +S + + G + LG+++S + VAR Sbjct: 272 SLTPLLANNKEKRGLALDGKLKHGDTNLASSTILRPGMDKEVLGMLVSYKVRVSLVVARG 331 Query: 83 TLPGEETEGSVSRVLELTVRHPSP 12 + G+ T VS L T+ HP P Sbjct: 332 GILGDLTSSDVSVELPFTLMHPKP 355
>COTG_BACSU (P39801) Spore coat protein G| Length = 195 Score = 32.7 bits (73), Expect = 0.84 Identities = 29/142 (20%), Positives = 52/142 (36%) Frame = +3 Query: 6 KEGRRMSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTH 185 K + SHR + R + K+ H+ K+F +S+ H ++ +K +H Sbjct: 33 KRSHKKSHRTHKKSRSHKKSYCSHKKSRSHK---KSFCSHKKSRS-HKKSYCSHKKSRSH 88 Query: 186 IVREVEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVR 365 K + HKK +Y K+ R + S + S + Sbjct: 89 ------KKSYRSHKKSRSYKKSYRSYKKSR-----SYKKSCRSYKKSRSYKKSYCSHKKK 137 Query: 366 RRFYKNWCKSKKKAFTKYALKY 431 R YK C++ KK++ + Y Sbjct: 138 SRSYKKSCRTHKKSYRSHKKYY 159
>SSH2_MOUSE (Q5SW75) Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-2L) (mSSH-2L) Length = 1423 Score = 30.8 bits (68), Expect = 3.2 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 18/70 (25%) Frame = +1 Query: 16 EGCRTVSSSTRDTD------------PSVSS-----PGSVARATAE-R*RLSPEMTNPRN 141 EGC T SST D + P + S PGSV RAT E RL E N Sbjct: 827 EGCLTTHSSTADLEEEEPVEGEHDWGPGMHSGAKWCPGSVRRATLEFEERLRQEQENHGT 886 Query: 142 ATSLPSLATR 171 A++ P+L+ R Sbjct: 887 ASAGPTLSNR 896
>ARRB1_RAT (P29066) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 176 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 12 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_MOUSE (Q8BWG8) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 176 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 12 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_HUMAN (P49407) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 176 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 12 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_BOVIN (P17870) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 176 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 12 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>YD428_YEAST (Q04066) Serine hydrolase YDR428C (EC 3.1.-.-)| Length = 261 Score = 29.6 bits (65), Expect = 7.1 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = +1 Query: 49 DTDPSVSSPGSVARATAER*RLSPEMTNPRNATSLPSLATRL 174 +T S+ + +V + + E RLSPE+TNPRN S TRL Sbjct: 55 NTIKSMDTESTVCQYSIEY-RLSPEITNPRNLYDAVSNITRL 95
>Y027_MYCGE (P47273) Hypothetical protein MG027| Length = 151 Score = 29.6 bits (65), Expect = 7.1 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = +3 Query: 333 VWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATV--VRV 506 + A L D + R W K KAF++ + +++++ QLE KY + ++ Sbjct: 39 IQADFLEYDTKERQLNEWQKLIVKAFSENIFSFQKKIEEQQLKNQLEIQTKYNKISGKKI 98 Query: 507 IAHTQIRKMKGLKQKKAH 560 T + L ++KAH Sbjct: 99 DLLTTAVVLCALSEQKAH 116
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 29.6 bits (65), Expect = 7.1 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Frame = -3 Query: 243 PHMSPSCAAWNQASRPHAQCES-CQPCSQGRQ*GG------ISWIGHLWGKP-----SP- 103 PH+ PSC + N R C C PC G GG I GH G SP Sbjct: 574 PHIRPSCTSDNDNGRQSEDCRRVCSPCPLGV--GGHQNTHHIQSNGHAQGHALVPAISPR 631 Query: 102 --FRGGASNASWGGNRGIRVSGARTYGATS 19 F G+ A + +S + +YGA + Sbjct: 632 LNFNSGSFGAMYSNMHHTALSMSDSYGAVT 661
>DNAJ_CLOTE (Q892R1) Chaperone protein dnaJ| Length = 375 Score = 29.6 bits (65), Expect = 7.1 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +3 Query: 399 KKAFTKYALKY--DSDAGKKEIQMQLEKMKKYATVVRVIAHTQIR 527 KKAF K ALKY D +AG KE + E+ K+ +V++ Q R Sbjct: 22 KKAFRKLALKYHPDKNAGNKEAE---ERFKEINEAYQVLSDPQKR 63
>ISU1_KLULA (Q6CRQ9) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 180 Score = 29.6 bits (65), Expect = 7.1 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = +1 Query: 13 GEGCRTVS-SSTRDTDPSVSSPGSVARATAER*RLSPEMTNPRNATS----LPSLATRLA 177 G G R + ++ R T P+V S S+A A ++ TNPRN S LP++ T L Sbjct: 21 GGGTRIIGVAAARATAPTVGSSPSMASARFYHPKVIDHYTNPRNVGSLDKNLPNVGTGLV 80 Query: 178 *LTLC 192 C Sbjct: 81 GAPAC 85
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)| Length = 1391 Score = 29.3 bits (64), Expect = 9.3 Identities = 37/159 (23%), Positives = 60/159 (37%) Frame = +3 Query: 75 RKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAXXX 254 +K+C + K K + + KKC A +A E K +L +K+ CE Sbjct: 858 KKKCEKAAKKRK---QAAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAK 914 Query: 255 XXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYD 434 VA K L A+ + + ++ K K +KKA K LK Sbjct: 915 KEKE-------VAERKKCEEL-------AKKIKKAAEKKKCKKLAKKEKKAGEKNKLKKK 960 Query: 435 SDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQK 551 + GKK+ + +K K+ A + + K K+K Sbjct: 961 AGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKK 999
>YE5A_SCHPO (O14174) Hypothetical protein C4D7.10c in chromosome I| Length = 473 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 26 AP*VRAPETRIPRFPPQEALLAPPRKGEGFPQR*PIQEMPPH 151 AP R +I R PP + PP+ + FP E PP+ Sbjct: 335 APVQRKTTPKIQRLPPSSIQIPPPKPMQKFPANAASSESPPN 376
>AAD4_YEAST (Q07747) Probable aryl-alcohol dehydrogenase AAD4 (EC 1.1.1.-)| Length = 329 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 1 RGRKGEGCRTVSSSTRDTDPSVSSPGSVARATAE 102 R + GEG RTVS +++ TD V ++A+ E Sbjct: 206 RKKNGEGLRTVSGTSKQTDKEVKISEALAKVAEE 239
>ACPS_BUCAI (P57344) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 126 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3 Query: 372 FYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVI 509 FYKN K F K+ALK + K I + + K YA + ++ Sbjct: 79 FYKNKSGKPKLRFLKHALKKSKEIQCKSIHVSISDQKLYAYALVIL 124
>ASF2_YEAST (P32448) Anti-silencing protein 2| Length = 525 Score = 29.3 bits (64), Expect = 9.3 Identities = 12/46 (26%), Positives = 25/46 (54%) Frame = +3 Query: 438 DAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQ 575 D +E K+YA V + ++ ++++K L+Q K+ + E+Q Sbjct: 17 DGSDQESSSSFNSDKEYAAVTKGLSSSRVQKKSSLRQMKSKVKELQ 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,295,042 Number of Sequences: 219361 Number of extensions: 1457938 Number of successful extensions: 5241 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 4950 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5171 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
