ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
2dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-137
3ref|XM_475457.1| Oryza sativa (japonica cultivar-group), predic... 494 e-136
4dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
5gb|AY108562.1| Zea mays PCO098370 mRNA sequence 172 1e-39
6gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 153 9e-34
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
8ref|XM_472721.1| Oryza sativa (japonica cultivar-group), predic... 147 6e-32
9emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 147 6e-32
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
11dbj|AK121783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 6e-32
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 3e-12
13gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 82 3e-12
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
15gb|AC154495.2| Mus musculus BAC clone RP24-111M22 from chromosom... 46 0.15
16gb|AC155231.2| Mus musculus BAC clone RP24-336I23 from chromosom... 46 0.15
17ref|XM_532646.2| PREDICTED: Canis familiaris similar to WD repea... 44 0.59
18emb|CR712982.2|CNS0GD36 Tetraodon nigroviridis full-length cDNA 44 0.59
19dbj|AK063763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
20gb|AY657912.1| Synthetic construct Peudomonas aeruginosa clone F... 42 2.3
21gb|AE007246.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 42 2.3
22gb|AE011768.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 2.3
23gb|AC152170.4| Ornithorhynchus anatinus BAC clone OABb-47A1 from... 42 2.3
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
25gb|AE004793.1| Pseudomonas aeruginosa PAO1, section 354 of 529 o... 42 2.3
26dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
27dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
28gb|U38648.1|EHBIOTOP2 Erwinia herbicola biotin synthetase (bioB)... 42 2.3
29gb|L10064.1|STMMUTA Streptomyces cinnamonensis methylmalonyl-CoA... 42 2.3
30ref|NM_102070.2| Arabidopsis thaliana unknown protein AT1G22200 ... 40 9.3
31ref|NM_001036000.1| Arabidopsis thaliana unknown protein AT1G222... 40 9.3
32ref|XM_465099.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
33gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.3
34ref|XM_414530.1| PREDICTED: Gallus gallus similar to KIAA1181 pr... 40 9.3
35gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
36gb|AF130342.2| Homo sapiens chromosome 8, complete sequence 40 9.3
37gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transpor... 40 9.3
38ref|XM_569654.1| Cryptococcus neoformans var. neoformans JEC21 e... 40 9.3
39gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosom... 40 9.3
40ref|XM_765470.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 9.3
41gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, com... 40 9.3
42emb|AL590406.6| Human DNA sequence from clone RP11-418P12 on chr... 40 9.3
43gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, comp... 40 9.3
44emb|AL136438.10| Human DNA sequence from clone RP11-111G7 on chr... 40 9.3
45gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, co... 40 9.3
46gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) ... 40 9.3
47gb|CP000088.1| Thermobifida fusca YX, complete genome 40 9.3
48gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) ... 40 9.3
49emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 9.3
50gb|AC150250.1| Uncultured bacterium zdt-25h12 clone zdt-25h12, c... 40 9.3
51gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complet... 40 9.3
52gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, com... 40 9.3
53gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.3
54emb|CR523788.1| Gallus gallus finished cDNA, clone ChEST559k5 40 9.3
55gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 9.3
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
58gb|AE009496.1| Brucella melitensis 16M chromosome I, section 53 ... 40 9.3
59gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete s... 40 9.3
60gb|AC131012.3| Homo sapiens 12 BAC RP13-639L21 (Roswell Park Can... 40 9.3
61dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.3
63gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 9.3
64emb|X75348.1|GGDNAIB3 G.gallus (white, leggerans) Avian Integrin... 40 9.3
65dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
66dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
67emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE a... 40 9.3
68dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
69emb|AL732598.10| Zebrafish DNA sequence from clone CH211-10E8 in... 40 9.3
70gb|AF110180.1|AF110180 Triticum aestivum high-affinity phosphate... 40 9.3
71emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 9.3
72dbj|AP003480.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.3 
>dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A06, full
           insert sequence
          Length = 1630

 Score =  500 bits (252), Expect = e-138
 Identities = 444/508 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 227
           |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 195 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 254

                                                                       
Query: 228 aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 287
           |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 255 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 314

                                                                       
Query: 288 tgctgctcctcttcgtctccgagacgaagtcgtatttttattcagcaaccgagaccaagc 347
           ||||||| || ||||||||||||||   ||| ||||||||||||||||| ||||| ||||
Sbjct: 315 tgctgctgctgttcgtctccgagacccggtcatatttttattcagcaacagagactaagc 374

                                                                       
Query: 348 tagtggtagacacgtcaagaggagaaaggctaagagtaaattttgatattactttcccga 407
           ||||||| ||||| |||||||| ||||||||| |||| ||||||||  | ||||| ||||
Sbjct: 375 tagtggttgacacatcaagaggggaaaggctacgagttaattttgacgtaacttttccga 434

                                                                       
Query: 408 gtattccttgcacccttctcagtgttgatacaagggatattagtggcgagcagcaccagg 467
           || |||| ||||||||||||||||||||||| | |||||||||||| |||||||| || |
Sbjct: 435 gtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatg 494

                                                                       
Query: 468 acattaggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaa 527
           ||||||||||||| || |||||||   |||| ||| |||||||||| ||||||||  | |
Sbjct: 495 acattaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggcta 554

                                                                       
Query: 528 gaaaagaaggcattggtggaacaaagattgagaaaccattgcaaaaacatggaggaaggc 587
           |||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||| |
Sbjct: 555 gaaaagaaggcattggtggagcaaagatagagagtccattgcaaaaacatggaggaagac 614

                                                                       
Query: 588 ttggcaaaggcgaggaatattgtggcacctgttatggtgcggaggagtcagatgaacaat 647
           |  ||||||| || ||||| |||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 615 tcagcaaaggtgaagaatactgtggcacgtgttatggtgctgaggagtcggatgaacaat 674

                                       
Query: 648 gctgtaattcatgtgaagaagttaggga 675
           |||||||||| |||||||||||||||||
Sbjct: 675 gctgtaattcttgtgaagaagttaggga 702
to top
>dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026P06, full
           insert sequence
          Length = 1874

 Score =  496 bits (250), Expect = e-137
 Identities = 442/506 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 227
           |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 208 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 267

                                                                       
Query: 228 aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 287
           |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 268 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 327

                                                                       
Query: 288 tgctgctcctcttcgtctccgagacgaagtcgtatttttattcagcaaccgagaccaagc 347
           ||||||| || ||||||||||||||   ||| ||||||||||||||||| ||||| ||||
Sbjct: 328 tgctgctgctgttcgtctccgagacccggtcatatttttattcagcaacagagactaagc 387

                                                                       
Query: 348 tagtggtagacacgtcaagaggagaaaggctaagagtaaattttgatattactttcccga 407
           ||||||| ||||| |||||||| ||||||||| |||| ||||||||  | ||||| ||||
Sbjct: 388 tagtggttgacacatcaagaggggaaaggctacgagttaattttgacgtaacttttccga 447

                                                                       
Query: 408 gtattccttgcacccttctcagtgttgatacaagggatattagtggcgagcagcaccagg 467
           || |||| ||||||||||||||||||||||| | |||||||||||| |||||||| || |
Sbjct: 448 gtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatg 507

                                                                       
Query: 468 acattaggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaa 527
           ||||||||||||| || |||||||   |||| ||| |||||||||| ||||||||  | |
Sbjct: 508 acattaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggcta 567

                                                                       
Query: 528 gaaaagaaggcattggtggaacaaagattgagaaaccattgcaaaaacatggaggaaggc 587
           |||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||| |
Sbjct: 568 gaaaagaaggcattggtggagcaaagatagagagtccattgcaaaaacatggaggaagac 627

                                                                       
Query: 588 ttggcaaaggcgaggaatattgtggcacctgttatggtgcggaggagtcagatgaacaat 647
           |  ||||||| || ||||| |||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 628 tcagcaaaggtgaagaatactgtggcacgtgttatggtgctgaggagtcggatgaacaat 687

                                     
Query: 648 gctgtaattcatgtgaagaagttagg 673
           |||||||||| |||||||||||||||
Sbjct: 688 gctgtaattcttgtgaagaagttagg 713
to top
>ref|XM_475457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score =  494 bits (249), Expect = e-136
 Identities = 426/485 (87%)
 Strand = Plus / Plus

                                                                       
Query: 191 aagctcaaggggctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctc 250
           ||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 19  aagctgaaggggctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctc 78

                                                                       
Query: 251 tccggcggcgtcgtcacgctcctctccgccttcgtcatgctgctcctcttcgtctccgag 310
           |||||||||||||||||| || || || || ||||||||||||| || ||||||||||||
Sbjct: 79  tccggcggcgtcgtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 138

                                                                       
Query: 311 acgaagtcgtatttttattcagcaaccgagaccaagctagtggtagacacgtcaagagga 370
           ||   ||| ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| 
Sbjct: 139 acccggtcatatttttattcagcaacagagactaagctagtggttgacacatcaagaggg 198

                                                                       
Query: 371 gaaaggctaagagtaaattttgatattactttcccgagtattccttgcacccttctcagt 430
           ||||||||| |||| ||||||||  | ||||| |||||| |||| |||||||||||||||
Sbjct: 199 gaaaggctacgagttaattttgacgtaacttttccgagtgttccctgcacccttctcagt 258

                                                                       
Query: 431 gttgatacaagggatattagtggcgagcagcaccaggacattaggcatgacattgaaaag 490
           |||||||| | |||||||||||| |||||||| || |||||||||||||| || ||||||
Sbjct: 259 gttgataccatggatattagtggagagcagcatcatgacattaggcatgatatagaaaag 318

                                                                       
Query: 491 aaaagattggactcacatggtaacgtcattgaatcaagaaaagaaggcattggtggaaca 550
           |   |||| ||| |||||||||| ||||||||  | ||||||||||||||||||||| ||
Sbjct: 319 aggcgattagacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagca 378

                                                                       
Query: 551 aagattgagaaaccattgcaaaaacatggaggaaggcttggcaaaggcgaggaatattgt 610
           ||||| ||||  ||||||||||||||||||||||| ||  ||||||| || ||||| |||
Sbjct: 379 aagatagagagtccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgt 438

                                                                       
Query: 611 ggcacctgttatggtgcggaggagtcagatgaacaatgctgtaattcatgtgaagaagtt 670
           ||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 439 ggcacgtgttatggtgctgaggagtcggatgaacaatgctgtaattcttgtgaagaagtt 498

                
Query: 671 aggga 675
           |||||
Sbjct: 499 aggga 503
to top
>dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072O04, full
            insert sequence
          Length = 3048

 Score =  365 bits (184), Expect = 1e-97
 Identities = 313/356 (87%)
 Strand = Plus / Plus

                                                                        
Query: 320  tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 379
            ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 835  tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 894

                                                                        
Query: 380  agagtaaattttgatattactttcccgagtattccttgcacccttctcagtgttgataca 439
             |||| ||||||||  | ||||| |||||| |||| ||||||||||||||||||||||| 
Sbjct: 895  cgagttaattttgacgtaacttttccgagtgttccctgcacccttctcagtgttgatacc 954

                                                                        
Query: 440  agggatattagtggcgagcagcaccaggacattaggcatgacattgaaaagaaaagattg 499
            | |||||||||||| |||||||| || |||||||||||||| || |||||||   |||| 
Sbjct: 955  atggatattagtggagagcagcatcatgacattaggcatgatatagaaaagaggcgatta 1014

                                                                        
Query: 500  gactcacatggtaacgtcattgaatcaagaaaagaaggcattggtggaacaaagattgag 559
            ||| |||||||||| ||||||||  | ||||||||||||||||||||| ||||||| |||
Sbjct: 1015 gacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagcaaagatagag 1074

                                                                        
Query: 560  aaaccattgcaaaaacatggaggaaggcttggcaaaggcgaggaatattgtggcacctgt 619
            |  ||||||||||||||||||||||| ||  ||||||| || ||||| |||||||| |||
Sbjct: 1075 agtccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgtggcacgtgt 1134

                                                                    
Query: 620  tatggtgcggaggagtcagatgaacaatgctgtaattcatgtgaagaagttaggga 675
            |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 1135 tatggtgctgaggagtcggatgaacaatgctgtaattcttgtgaagaagttaggga 1190
to top
>gb|AY108562.1| Zea mays PCO098370 mRNA sequence
          Length = 835

 Score =  172 bits (87), Expect = 1e-39
 Identities = 159/183 (86%)
 Strand = Plus / Plus

                                                                       
Query: 206 gacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggcgtcgtc 265
           ||||| ||||||||||| |||||||||||||||||| | |||||||  |||||| |||||
Sbjct: 265 gacgcgtaccccaaggtgaacgaggacttctacaagtggacgctctttggcggcatcgtc 324

                                                                       
Query: 266 acgctcctctccgccttcgtcatgctgctcctcttcgtctccgagacgaagtcgtatttt 325
           |||||| || ||||| |||||||| |||| |||||| |||||||||| | ||| ||||||
Sbjct: 325 acgctcgtcgccgccgtcgtcatgttgcttctcttcatctccgagaccaggtcatatttt 384

                                                                       
Query: 326 tattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggctaagagta 385
           ||||||||||| ||||| ||| |||| || ||||| |||||| ||||||||||| |||||
Sbjct: 385 tattcagcaacagagactaagttagttgtggacacatcaagaagagaaaggctacgagta 444

              
Query: 386 aat 388
           |||
Sbjct: 445 aat 447
to top
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0088I06, complete sequence
          Length = 187651

 Score =  153 bits (77), Expect = 9e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                        
Query: 168  gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 227
            |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 4610 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 4669

                                                                        
Query: 228  aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 287
            |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 4670 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 4729

                                     
Query: 288  tgctgctcctcttcgtctccgagac 312
            ||||||| || ||||||||||||||
Sbjct: 4730 tgctgctgctgttcgtctccgagac 4754



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 398  actttcccgagtattccttgcacccttctcagtgttgatacaagggatattagtggcgag 457
            ||||| |||||| |||| ||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 5836 acttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagag 5895

                           
Query: 458  cagcaccaggacatt 472
            ||||| || ||||||
Sbjct: 5896 cagcatcatgacatt 5910



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                        
Query: 320  tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 379
            ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 5595 tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 5654

                 
Query: 380  agagt 384
             ||||
Sbjct: 5655 cgagt 5659



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                        
Query: 563  ccattgcaaaaacatggaggaaggcttggcaaaggcgaggaatattgtggcacctgttat 622
            ||||||||||||||||||||||| ||  ||||||| || ||||| |||||||| ||||||
Sbjct: 6802 ccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgtggcacgtgttat 6861

                        
Query: 623  ggtgcggaggag 634
            ||||| ||||||
Sbjct: 6862 ggtgctgaggag 6873



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                       
Query: 633  agtcagatgaacaatgctgtaattcatgtgaagaagttaggga 675
            |||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 6990 agtcggatgaacaatgctgtaattcttgtgaagaagttaggga 7032



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 473  aggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaagaaaa 532
            |||||||| || |||||||   |||| ||| |||||||||| ||||||||  | ||||||
Sbjct: 5991 aggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaa 6050

                                 
Query: 533  gaaggcattggtggaacaaag 553
            ||||||||||||||| |||||
Sbjct: 6051 gaaggcattggtggagcaaag 6071
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 9e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                            
Query: 168      gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 227
                |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 23936121 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 23936180

                                                                            
Query: 228      aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 287
                |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 23936181 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 23936240

                                         
Query: 288      tgctgctcctcttcgtctccgagac 312
                ||||||| || ||||||||||||||
Sbjct: 23936241 tgctgctgctgttcgtctccgagac 23936265



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 398      actttcccgagtattccttgcacccttctcagtgttgatacaagggatattagtggcgag 457
                ||||| |||||| |||| ||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 23937347 acttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagag 23937406

                               
Query: 458      cagcaccaggacatt 472
                ||||| || ||||||
Sbjct: 23937407 cagcatcatgacatt 23937421



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 320      tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 379
                ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 23937106 tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 23937165

                     
Query: 380      agagt 384
                 ||||
Sbjct: 23937166 cgagt 23937170



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 563      ccattgcaaaaacatggaggaaggcttggcaaaggcgaggaatattgtggcacctgttat 622
                ||||||||||||||||||||||| ||  ||||||| || ||||| |||||||| ||||||
Sbjct: 23938313 ccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgtggcacgtgttat 23938372

                            
Query: 623      ggtgcggaggag 634
                ||||| ||||||
Sbjct: 23938373 ggtgctgaggag 23938384



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                           
Query: 633      agtcagatgaacaatgctgtaattcatgtgaagaagttaggga 675
                |||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 23938501 agtcggatgaacaatgctgtaattcttgtgaagaagttaggga 23938543



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 473      aggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaagaaaa 532
                |||||||| || |||||||   |||| ||| |||||||||| ||||||||  | ||||||
Sbjct: 23937502 aggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaa 23937561

                                     
Query: 533      gaaggcattggtggaacaaag 553
                ||||||||||||||| |||||
Sbjct: 23937562 gaaggcattggtggagcaaag 23937582



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 151      ccggcggccgccgaggaggg 170
                ||||||||||||||||||||
Sbjct: 27420436 ccggcggccgccgaggaggg 27420417
to top
>ref|XM_472721.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1161

 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                       
Query: 173 atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 232
           ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 1   atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 60

                                                                       
Query: 233 ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 292
           |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 61  ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 120

                             
Query: 293 ctcctcttcgtctccgag 310
           ||||||||||||||||||
Sbjct: 121 ctcctcttcgtctccgag 138



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 605 tattgtggcacctgttatggtgcggaggagtcagatgaacaatgctgtaattcatgtgaa 664
           ||||||||| | |||||||||||||| || || ||||| || || ||||| || ||||||
Sbjct: 433 tattgtggctcttgttatggtgcggaagaatctgatgagcagtgttgtaactcgtgtgaa 492

             
Query: 665 ga 666
           ||
Sbjct: 493 ga 494
to top
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                          
Query: 173    atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 232
              ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 123839 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 123780

                                                                          
Query: 233    ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 292
              |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 123779 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 123720

                                
Query: 293    ctcctcttcgtctccgag 310
              ||||||||||||||||||
Sbjct: 123719 ctcctcttcgtctccgag 123702
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                            
Query: 173      atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 232
                ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 22786643 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 22786584

                                                                            
Query: 233      ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 292
                |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 22786583 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 22786524

                                  
Query: 293      ctcctcttcgtctccgag 310
                ||||||||||||||||||
Sbjct: 22786523 ctcctcttcgtctccgag 22786506
to top
>dbj|AK121783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A05, full
           insert sequence
          Length = 2103

 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                       
Query: 173 atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 232
           ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 170 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 229

                                                                       
Query: 233 ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 292
           |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 230 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 289

                             
Query: 293 ctcctcttcgtctccgag 310
           ||||||||||||||||||
Sbjct: 290 ctcctcttcgtctccgag 307



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 605 tattgtggcacctgttatggtgcggaggagtcagatgaacaatgctgtaattcatgtgaa 664
           ||||||||| | ||||||||||||||||| || ||||| || || ||||| || ||||||
Sbjct: 600 tattgtggctcttgttatggtgcggaggaatctgatgagcagtgttgtaactcgtgtgaa 659

             
Query: 665 ga 666
           ||
Sbjct: 660 ga 661
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 203      ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 259
                |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 11600829 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 11600773



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      tcgtcatgctgctcctcttc 301
                ||||||||||||||||||||
Sbjct: 35883210 tcgtcatgctgctcctcttc 35883191
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 203    ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 259
              |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 151401 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 151345
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 203      ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 259
                |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 11597592 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 11597536



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      tcgtcatgctgctcctcttc 301
                ||||||||||||||||||||
Sbjct: 35973340 tcgtcatgctgctcctcttc 35973321
to top
>gb|AC154495.2| Mus musculus BAC clone RP24-111M22 from chromosome 12, complete
             sequence
          Length = 181538

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 574   acatggaggaaggcttggcaaag 596
             |||||||||||||||||||||||
Sbjct: 44381 acatggaggaaggcttggcaaag 44403
to top
>gb|AC155231.2| Mus musculus BAC clone RP24-336I23 from chromosome 12, complete
             sequence
          Length = 175296

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 574   acatggaggaaggcttggcaaag 596
             |||||||||||||||||||||||
Sbjct: 21853 acatggaggaaggcttggcaaag 21831
to top
>ref|XM_532646.2| PREDICTED: Canis familiaris similar to WD repeat domain 51B
           (LOC475422), mRNA
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 47  acccgcacccgcacccggcgga 68
           ||||||||||||||||||||||
Sbjct: 745 acccgcacccgcacccggcgga 766
to top
>emb|CR712982.2|CNS0GD36 Tetraodon nigroviridis full-length cDNA
          Length = 1130

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 269 ctcctctccgccttcgtcatgctgct 294
           ||||||||||||||| ||||||||||
Sbjct: 228 ctcctctccgccttcctcatgctgct 203
to top
>dbj|AK063763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B02, full
           insert sequence
          Length = 1565

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 605 tattgtggcacctgttatggtgcggaggagtcagatgaacaatgctgtaattcatgtgaa 664
           ||||||||| | |||||||||||||| || || ||||| || || ||||| || ||||||
Sbjct: 174 tattgtggctcttgttatggtgcggaagaatctgatgagcagtgttgtaactcgtgtgaa 233

             
Query: 665 ga 666
           ||
Sbjct: 234 ga 235
to top
>gb|AY657912.1| Synthetic construct Peudomonas aeruginosa clone FLH045902.01F
           PA3744 gene, partial cds
          Length = 528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 ccaagctcaaggggctcgacg 209
           |||||||||||||||||||||
Sbjct: 200 ccaagctcaaggggctcgacg 220
to top
>gb|AE007246.1| Sinorhizobium meliloti 1021 plasmid pSymA section 52 of 121 of the
            complete plasmid sequence
          Length = 10029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ccgacccgcacccgcacccgg 64
            |||||||||||||||||||||
Sbjct: 7038 ccgacccgcacccgcacccgg 7018
to top
>gb|AE011768.1| Xanthomonas axonopodis pv. citri str. 306,  section 146 of 469 of the
            complete genome
          Length = 12907

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 150  tccggcggccgccgaggaggg 170
            |||||||||||||||||||||
Sbjct: 3194 tccggcggccgccgaggaggg 3214
to top
>gb|AC152170.4| Ornithorhynchus anatinus BAC clone OABb-47A1 from chromosome unknown,
             complete sequence
          Length = 151943

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 487   aaagaaaagattggactcaca 507
             |||||||||||||||||||||
Sbjct: 31787 aaagaaaagattggactcaca 31807
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 521      gaatcaagaaaagaaggcatt 541
                |||||||||||||||||||||
Sbjct: 11829122 gaatcaagaaaagaaggcatt 11829102
to top
>gb|AE004793.1| Pseudomonas aeruginosa PAO1, section 354 of 529 of the complete
            genome
          Length = 11506

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 189  ccaagctcaaggggctcgacg 209
            |||||||||||||||||||||
Sbjct: 6870 ccaagctcaaggggctcgacg 6850
to top
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 521   gaatcaagaaaagaaggcatt 541
             |||||||||||||||||||||
Sbjct: 10612 gaatcaagaaaagaaggcatt 10592
to top
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1506_A04
          Length = 114998

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 521   gaatcaagaaaagaaggcatt 541
             |||||||||||||||||||||
Sbjct: 71940 gaatcaagaaaagaaggcatt 71920
to top
>gb|U38648.1|EHBIOTOP2 Erwinia herbicola biotin synthetase (bioB) gene, complete cds
          Length = 1041

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 243 gcacgctctccggcggcgtcg 263
           |||||||||||||||||||||
Sbjct: 658 gcacgctctccggcggcgtcg 638
to top
>gb|L10064.1|STMMUTA Streptomyces cinnamonensis methylmalonyl-CoA mutase small subunit
            (mutA) and large subunit (mutB) genes, complete cds's
          Length = 5732

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 254  ggcggcgtcgtcacgctcctc 274
            |||||||||||||||||||||
Sbjct: 4697 ggcggcgtcgtcacgctcctc 4677
to top
>ref|NM_102070.2| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
           AT1G22200.1 mRNA, complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 551 aagattgagaaaccattgcaaaaacatggaggaagg 586
           |||||||| ||||| || ||||||||||| ||||||
Sbjct: 536 aagattgaaaaacctttacaaaaacatggtggaagg 571
to top
>ref|NM_001036000.1| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
           AT1G22200.2 mRNA, complete cds
          Length = 1617

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 551 aagattgagaaaccattgcaaaaacatggaggaagg 586
           |||||||| ||||| || ||||||||||| ||||||
Sbjct: 565 aagattgaaaaacctttacaaaaacatggtggaagg 600
to top
>ref|XM_465099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 cggcggccgccgaggagggagatg 175
           ||||||||| ||||||||||||||
Sbjct: 210 cggcggccggcgaggagggagatg 233
to top
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 157     gccgccgaggagggagatgg 176
               ||||||||||||||||||||
Sbjct: 1036700 gccgccgaggagggagatgg 1036681
to top
>ref|XM_414530.1| PREDICTED: Gallus gallus similar to KIAA1181 protein (LOC416205),
           partial mRNA
          Length = 2168

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 545 ggaacaaagattgagaaacc 564
           ||||||||||||||||||||
Sbjct: 750 ggaacaaagattgagaaacc 769
to top
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
             complete sequence
          Length = 144601

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   ccggcggccgccgaggaggg 170
             ||||||||||||||||||||
Sbjct: 16566 ccggcggccgccgaggaggg 16547
to top
>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence
          Length = 349992

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    attgcaaaaacatggaggaa 584
              ||||||||||||||||||||
Sbjct: 308771 attgcaaaaacatggaggaa 308752
to top
>gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transporter 6 (Pht1-6) gene,
            complete cds
          Length = 2876

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  ccggcggcgtcgtcacgctc 271
            ||||||||||||||||||||
Sbjct: 1449 ccggcggcgtcgtcacgctc 1468
to top
>ref|XM_569654.1| Cryptococcus neoformans var. neoformans JEC21 elongation factor ts
           (ef-ts) (CNC03280) partial mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 gccgccgaggagggagatgg 176
           ||||||||||||||||||||
Sbjct: 321 gccgccgaggagggagatgg 302
to top
>gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosome 6, complete sequence
          Length = 154134

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   catgacattgaaaagaaaag 495
             ||||||||||||||||||||
Sbjct: 46201 catgacattgaaaagaaaag 46182
to top
>ref|XM_765470.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_567_63122_61527)
            partial mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 529  aaaagaaggcattggtggaacaaa 552
            ||||||||||||||| ||||||||
Sbjct: 1397 aaaagaaggcattggaggaacaaa 1420
to top
>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence
          Length = 188119

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   agcaccaggacattaggcat 478
             ||||||||||||||||||||
Sbjct: 68053 agcaccaggacattaggcat 68034
to top
>emb|AL590406.6| Human DNA sequence from clone RP11-418P12 on chromosome 6, complete
             sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   aaaagaaaagattggactca 505
             ||||||||||||||||||||
Sbjct: 50906 aaaagaaaagattggactca 50887
to top
>gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, complete sequence
          Length = 98967

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   ttccttgcacccttctcagt 430
             ||||||||||||||||||||
Sbjct: 74037 ttccttgcacccttctcagt 74018
to top
>emb|AL136438.10| Human DNA sequence from clone RP11-111G7 on chromosome 13q11-12.3
             Contains part of the ATP8A2 gene for ATPase,
             aminophospholipid transporter-like, Class I, type 8A,
             member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB,
             DKFZP434B1913), complete sequence
          Length = 178319

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   aaaccattgcaaaaacatgg 579
             ||||||||||||||||||||
Sbjct: 70385 aaaccattgcaaaaacatgg 70366
to top
>gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, complete sequence
          Length = 158420

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    ttccttgcacccttctcagt 430
              ||||||||||||||||||||
Sbjct: 149786 ttccttgcacccttctcagt 149805
to top
>gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1192

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 551 aagattgagaaaccattgcaaaaacatggaggaagg 586
           |||||||| ||||| || ||||||||||| ||||||
Sbjct: 379 aagattgaaaaacctttacaaaaacatggtggaagg 414
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    cggcggccgccgaggaggga 171
              ||||||||||||||||||||
Sbjct: 877916 cggcggccgccgaggaggga 877935
to top
>gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1522

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 551 aagattgagaaaccattgcaaaaacatggaggaagg 586
           |||||||| ||||| || ||||||||||| ||||||
Sbjct: 536 aagattgaaaaacctttacaaaaacatggtggaagg 571
to top
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   ccgcacccgcacccggcgga 68
            ||||||||||||||||||||
Sbjct: 995  ccgcacccgcacccggcgga 1014
to top
>gb|AC150250.1| Uncultured bacterium zdt-25h12 clone zdt-25h12, complete sequence
          Length = 41495

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 241  gcgcacgctctccggcggcg 260
            ||||||||||||||||||||
Sbjct: 7743 gcgcacgctctccggcggcg 7724
to top
>gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complete sequence
          Length = 44837

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   aagaaaagaaggcattggtg 545
             ||||||||||||||||||||
Sbjct: 23385 aagaaaagaaggcattggtg 23404
to top
>gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, complete sequence
          Length = 186881

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 653    aattcatgtgaagaagttag 672
              ||||||||||||||||||||
Sbjct: 130855 aattcatgtgaagaagttag 130874
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      acccgcacccgcacccggcg 66
               ||||||||||||||||||||
Sbjct: 4485165 acccgcacccgcacccggcg 4485184
to top
>emb|CR523788.1| Gallus gallus finished cDNA, clone ChEST559k5
          Length = 1031

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  ggaacaaagattgagaaacc 564
            ||||||||||||||||||||
Sbjct: 1007 ggaacaaagattgagaaacc 1026
to top
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tcgtcatgctgctcctcttc 301
             ||||||||||||||||||||
Sbjct: 77915 tcgtcatgctgctcctcttc 77934
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 485     gaaaagaaaagattggactcacat 508
               ||||||||||| ||||||||||||
Sbjct: 5585943 gaaaagaaaaggttggactcacat 5585966
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 152      cggcggccgccgaggagggagatg 175
                ||||||||| ||||||||||||||
Sbjct: 11487191 cggcggccggcgaggagggagatg 11487168
to top
>gb|AE009496.1| Brucella melitensis 16M chromosome I, section 53 of 195 of the
            complete sequence
          Length = 11993

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  cggcggcgtcgtcacgctcc 272
            ||||||||||||||||||||
Sbjct: 2168 cggcggcgtcgtcacgctcc 2149
to top
>gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 551 aagattgagaaaccattgcaaaaacatggaggaagg 586
           |||||||| ||||| || ||||||||||| ||||||
Sbjct: 519 aagattgaaaaacctttacaaaaacatggtggaagg 554
to top
>gb|AC131012.3| Homo sapiens 12 BAC RP13-639L21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 21399

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 636   cagatgaacaatgctgtaattcatgtga 663
             |||||| | |||||||||||||||||||
Sbjct: 15771 cagatggaaaatgctgtaattcatgtga 15798
to top
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   cggcggccgccgaggagggagatg 175
             ||||||||| ||||||||||||||
Sbjct: 69683 cggcggccggcgaggagggagatg 69660
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 244     cacgctctccggcggcgtcg 263
               ||||||||||||||||||||
Sbjct: 7612582 cacgctctccggcggcgtcg 7612601
to top
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     cggcggcgtcgtcacgctcc 272
               ||||||||||||||||||||
Sbjct: 1446422 cggcggcgtcgtcacgctcc 1446441
to top
>emb|X75348.1|GGDNAIB3 G.gallus (white, leggerans) Avian Integrin B3 promoter region DNA
          Length = 902

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 gctgctgccttccggcggccgccg 163
           ||||||||| ||||||||||||||
Sbjct: 89  gctgctgccctccggcggccgccg 66
to top
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0412D08
          Length = 150188

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 485   gaaaagaaaagattggactcacat 508
             ||||||||||| ||||||||||||
Sbjct: 41319 gaaaagaaaaggttggactcacat 41342
to top
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0035F08
          Length = 167446

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 485    gaaaagaaaagattggactcacat 508
              ||||||||||| ||||||||||||
Sbjct: 112171 gaaaagaaaaggttggactcacat 112194
to top
>emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE and eryBIII genes and eryB
            gene
          Length = 2760

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  cgcctaccccaaggtcaacg 227
            ||||||||||||||||||||
Sbjct: 1858 cgcctaccccaaggtcaacg 1839
to top
>dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089I06, full
           insert sequence
          Length = 1821

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 cggcggccgccgaggagggagatg 175
           ||||||||| ||||||||||||||
Sbjct: 209 cggcggccggcgaggagggagatg 232
to top
>emb|AL732598.10| Zebrafish DNA sequence from clone CH211-10E8 in linkage group 6,
             complete sequence
          Length = 88982

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   cattgaaaagaaaagattgg 500
             ||||||||||||||||||||
Sbjct: 66279 cattgaaaagaaaagattgg 66298
to top
>gb|AF110180.1|AF110180 Triticum aestivum high-affinity phosphate transporter PT1 mRNA,
           partial cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ccggcggcgtcgtcacgctc 271
           ||||||||||||||||||||
Sbjct: 440 ccggcggcgtcgtcacgctc 459
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     cggcggcgtcgtcacgctcc 272
               ||||||||||||||||||||
Sbjct: 1443576 cggcggcgtcgtcacgctcc 1443595
to top
>dbj|AP003480.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970H2
          Length = 150331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 653    aattcatgtgaagaagttag 672
              ||||||||||||||||||||
Sbjct: 147256 aattcatgtgaagaagttag 147237


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,553
Number of Sequences: 3902068
Number of extensions: 5989553
Number of successful extensions: 113118
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112234
Number of HSP's gapped (non-prelim): 884
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top