ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12k21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK107758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 539 e-150
2gb|AY111115.1| Zea mays CL42423_1 mRNA sequence 351 2e-93
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
4dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
5dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
6ref|XM_970068.1| PREDICTED: Tribolium castaneum similar to CG986... 42 2.3
7ref|NM_073801.2| Caenorhabditis elegans ZC455.4 (UDP-glucuronysl... 42 2.3
8dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
9emb|Z75554.1|CEZC455 Caenorhabditis elegans Cosmid ZC455, comple... 42 2.3
10gb|M12103.1|HAMDES2 Hamster desmin gene encoding the intermediat... 42 2.3
11ref|NM_112787.2| Arabidopsis thaliana flavonol synthase/ iron io... 40 8.9
12ref|NM_180282.1| Arabidopsis thaliana flavonol synthase/ iron io... 40 8.9
13gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.9
14gb|AE009952.1| Yersinia pestis KIM, complete genome 40 8.9
15emb|CR696242.2|CNS0G066 Tetraodon nigroviridis full-length cDNA 40 8.9
16gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 8.9
17gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.9
18gb|AY035056.1| Arabidopsis thaliana At3g19010 mRNA sequence 40 8.9
19emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 8.9
20emb|AJ514926.1|MAR514926 Meloidogyne artiellia mRNA for LIN-45 R... 40 8.9
21emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.9
22gb|DQ402050.1| Brassica napus AP2/EREBP transcriptional factor W... 40 8.9
23gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.9
24gb|BC103363.1| Bos taurus similar to Importin alpha-2 subunit (K... 40 8.9
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
26emb|BX824918.1|CNS0A6VC Arabidopsis thaliana Full-length cDNA Co... 40 8.9
27emb|BX824884.1|CNS0A6XZ Arabidopsis thaliana Full-length cDNA Co... 40 8.9
28emb|BX823322.1|CNS0A6OL Arabidopsis thaliana Full-length cDNA Co... 40 8.9
29gb|AY088124.1| Arabidopsis thaliana clone 41506 mRNA, complete s... 40 8.9
30gb|BT002747.1| Arabidopsis thaliana clone C105379 unknown protei... 40 8.9
31dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.9
32dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
33dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
34dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.9
35gb|AF220459.1|AF220459 Dolerocypris sinensis 18S ribosomal RNA g... 40 8.9
36ref|NM_001034449.1| Bos taurus similar to Importin alpha-2 subun... 40 8.9
37emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chro... 40 8.9 
>dbj|AK107758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A06, full
           insert sequence
          Length = 940

 Score =  539 bits (272), Expect = e-150
 Identities = 431/484 (89%)
 Strand = Plus / Plus

                                                                       
Query: 8   gcaagcccgccccgtccgaggccgcggccaccgccaggtggctcgccgcgcagaacacct 67
           |||||||||||||  |||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 274 gcaagcccgcccccaccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgt 333

                                                                       
Query: 68  ggggcgtcctcagcacaatatcaagtgatctaagtggcgctccgtttggcaatgtagttt 127
           ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 334 ggggcgtcctcagcacaatatcaagtgatctaagtggagctccttttggcaatgtagttt 393

                                                                       
Query: 128 catatagtgacggggtaccaggtgagagccatggtattccgtacttttatctgactactc 187
           |||||||||| || || ||||||||||||||||| || || ||||| |||||||| || |
Sbjct: 394 catatagtgatggagtgccaggtgagagccatggaatcccctacttctatctgacaacgc 453

                                                                       
Query: 188 tggatcccactgcaagagatgcattggaggatgaaaggacgtcctttacccttagtgagt 247
           | ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 454 tagatcccactgcgagagatgcattggaggatgaaaggacctcctttacccttagcgagt 513

                                                                       
Query: 248 tccctcttggcacctgtgggaaggttgatcctgaaaacccaacatgtgcaaaacttactc 307
           |||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 514 tccctcttgggacatgtgggaagattgatcctgaaaacccaacttgtgcaaaacttactc 573

                                                                       
Query: 308 ttaccggaaagttgaagatggttgaccataagtcacctgaagcggatctggccaaaacag 367
           |||| |||||||||||| || |||||| | | ||| ||||||| ||| ||||||||  ||
Sbjct: 574 ttactggaaagttgaagttgattgaccctcaatcatctgaagcagatttggccaaagaag 633

                                                                       
Query: 368 cgcttttcagcaaacatcctgaaatggagggctggccaaagaaccatcacttcgagatct 427
           | ||||| |  |||||||||||||||||||| ||||||||||| |||||  || | ||||
Sbjct: 634 cactttttactaaacatcctgaaatggagggttggccaaagaatcatcatctccaaatct 693

                                                                       
Query: 428 ttaaactggaaatcgaaaacatattcttgatcgactggtttgggggtcctaaacctatat 487
           | ||| |||||||| |||||||||| ||||| || ||||||||||||||||| |||||||
Sbjct: 694 tcaaattggaaatcaaaaacatatttttgattgattggtttgggggtcctaagcctatat 753

               
Query: 488 cccc 491
           ||||
Sbjct: 754 cccc 757
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>gb|AY111115.1| Zea mays CL42423_1 mRNA sequence
          Length = 768

 Score =  351 bits (177), Expect = 2e-93
 Identities = 300/341 (87%)
 Strand = Plus / Minus

                                                                       
Query: 22  tccgaggccgcggccaccgccaggtggctcgccgcgcagaacacctggggcgtcctcagc 81
           ||||||||| | ||||| || |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 752 tccgaggccaccgccactgcgaggtggctcgccgcccagaacacgtggggtgtcctcagc 693

                                                                       
Query: 82  acaatatcaagtgatctaagtggcgctccgtttggcaatgtagtttcatatagtgacggg 141
           ||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||| || 
Sbjct: 692 acaatatcaagtgacttaagtggagctccatttggcaatgtagtttcatatagtgatgga 633

                                                                       
Query: 142 gtaccaggtgagagccatggtattccgtacttttatctgactactctggatcccactgca 201
           |||||||| ||| ||| ||| || || |||||||||||||| ||||||||||||| ||||
Sbjct: 632 gtaccaggcgagggccgtggaataccctacttttatctgacaactctggatcccagtgca 573

                                                                       
Query: 202 agagatgcattggaggatgaaaggacgtcctttacccttagtgagttccctcttggcacc 261
           ||||||||| |||| ||||||||||| || ||||||||||||||||||||||| || || 
Sbjct: 572 agagatgcactggaagatgaaaggacctcttttacccttagtgagttccctctgggaact 513

                                                                       
Query: 262 tgtgggaaggttgatcctgaaaacccaacatgtgcaaaacttactcttaccggaaagttg 321
           |||||| |  | |||||||||||||| || |||||||||||||||||||  |||||||||
Sbjct: 512 tgtggggaaatagatcctgaaaaccccacttgtgcaaaacttactcttaatggaaagttg 453

                                                    
Query: 322 aagatggttgaccataagtcacctgaagcggatctggccaa 362
           ||||||||||||| | ||||| ||||||| ||| |||||||
Sbjct: 452 aagatggttgaccttcagtcatctgaagcagatttggccaa 412



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 405 aaagaaccatcacttcgagatctttaaactggaaatcgaaaacatatt 452
           |||||| ||||| ||| | ||||| ||| |||||||||||||||||||
Sbjct: 369 aaagaatcatcatttcaaaatcttcaaaatggaaatcgaaaacatatt 322
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  260 bits (131), Expect = 5e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                           
Query: 116     gcaatgtagtttcatatagtgacggggtaccaggtgagagccatggtattccgtactttt 175
               |||||||||||||||||||||| || || ||||||||||||||||| || || ||||| |
Sbjct: 7200843 gcaatgtagtttcatatagtgatggagtgccaggtgagagccatggaatcccctacttct 7200784

                                                                           
Query: 176     atctgactactctggatcccactgcaagagatgcattggaggatgaaaggacgtccttta 235
               ||||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 7200783 atctgacaacgctagatcccactgcgagagatgcattggaggatgaaaggacctccttta 7200724

                                                                           
Query: 236     cccttagtgagttccctcttggcacctgtgggaaggttgatcctgaaaacccaacatgtg 295
               ||||||| |||||||||||||| || ||||||||| ||||||||||||||||||| ||||
Sbjct: 7200723 cccttagcgagttccctcttgggacatgtgggaagattgatcctgaaaacccaacttgtg 7200664

                                      
Query: 296     caaaacttactcttaccggaaag 318
               |||||||||||||||| ||||||
Sbjct: 7200663 caaaacttactcttactggaaag 7200641



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                           
Query: 8       gcaagcccgccccgtccgaggccgcggccaccgccaggtggctcgccgcgcagaacacct 67
               |||||||||||||  |||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 7201984 gcaagcccgcccccaccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgt 7201925

                            
Query: 68      ggggcgtcctcag 80
               |||||||||||||
Sbjct: 7201924 ggggcgtcctcag 7201912



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                           
Query: 400     tggccaaagaaccatcacttcgagatctttaaactggaaatcgaaaacatattcttgatc 459
               ||||||||||| ||||| ||| | ||||| ||| |||||||| |||||||||| ||||| 
Sbjct: 7199612 tggccaaagaatcatcatttccaaatcttcaaattggaaatcaaaaacatatttttgatt 7199553

                                               
Query: 460     gactggtttgggggtcctaaacctatatcccc 491
               || ||||||||||||||||| |||||||||||
Sbjct: 7199552 gattggtttgggggtcctaagcctatatcccc 7199521



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                         
Query: 23      ccgaggccgcggccaccgccaggtggctcgccgcgcagaacacctggggcgtcctcag 80
               |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 7217460 ccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgtggggcgtcctcag 7217403



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 78      cagcacaatatcaagtgatctaagtggcgctccgtttgg 116
               ||||||||||||||||||||||||||| ||||| |||||
Sbjct: 7200978 cagcacaatatcaagtgatctaagtggagctccttttgg 7200940



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                           
Query: 317     agttgaagatggttgaccataagtcacctgaagcggatctggccaaaacagcgcttttca 376
               |||||||| || |||||| | | ||| ||||||| ||| ||||||||  ||| ||||| |
Sbjct: 7199785 agttgaagttgattgaccctcaatcatctgaagcagatttggccaaagaagcacttttta 7199726

                                     
Query: 377     gcaaacatcctgaaatggaggg 398
                 ||||||||||||||||||||
Sbjct: 7199725 ctaaacatcctgaaatggaggg 7199704
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>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score =  260 bits (131), Expect = 5e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                         
Query: 116   gcaatgtagtttcatatagtgacggggtaccaggtgagagccatggtattccgtactttt 175
             |||||||||||||||||||||| || || ||||||||||||||||| || || ||||| |
Sbjct: 78254 gcaatgtagtttcatatagtgatggagtgccaggtgagagccatggaatcccctacttct 78195

                                                                         
Query: 176   atctgactactctggatcccactgcaagagatgcattggaggatgaaaggacgtccttta 235
             ||||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 78194 atctgacaacgctagatcccactgcgagagatgcattggaggatgaaaggacctccttta 78135

                                                                         
Query: 236   cccttagtgagttccctcttggcacctgtgggaaggttgatcctgaaaacccaacatgtg 295
             ||||||| |||||||||||||| || ||||||||| ||||||||||||||||||| ||||
Sbjct: 78134 cccttagcgagttccctcttgggacatgtgggaagattgatcctgaaaacccaacttgtg 78075

                                    
Query: 296   caaaacttactcttaccggaaag 318
             |||||||||||||||| ||||||
Sbjct: 78074 caaaacttactcttactggaaag 78052



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 8     gcaagcccgccccgtccgaggccgcggccaccgccaggtggctcgccgcgcagaacacct 67
             |||||||||||||  |||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 79395 gcaagcccgcccccaccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgt 79336

                          
Query: 68    ggggcgtcctcag 80
             |||||||||||||
Sbjct: 79335 ggggcgtcctcag 79323



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 400   tggccaaagaaccatcacttcgagatctttaaactggaaatcgaaaacatattcttgatc 459
             ||||||||||| ||||| ||| | ||||| ||| |||||||| |||||||||| ||||| 
Sbjct: 77023 tggccaaagaatcatcatttccaaatcttcaaattggaaatcaaaaacatatttttgatt 76964

                                             
Query: 460   gactggtttgggggtcctaaacctatatcccc 491
             || ||||||||||||||||| |||||||||||
Sbjct: 76963 gattggtttgggggtcctaagcctatatcccc 76932



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 23    ccgaggccgcggccaccgccaggtggctcgccgcgcagaacacctggggcgtcctcag 80
             |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 94871 ccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgtggggcgtcctcag 94814



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 78    cagcacaatatcaagtgatctaagtggcgctccgtttgg 116
             ||||||||||||||||||||||||||| ||||| |||||
Sbjct: 78389 cagcacaatatcaagtgatctaagtggagctccttttgg 78351



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                         
Query: 317   agttgaagatggttgaccataagtcacctgaagcggatctggccaaaacagcgcttttca 376
             |||||||| || |||||| | | ||| ||||||| ||| ||||||||  ||| ||||| |
Sbjct: 77196 agttgaagttgattgaccctcaatcatctgaagcagatttggccaaagaagcacttttta 77137

                                   
Query: 377   gcaaacatcctgaaatggaggg 398
               ||||||||||||||||||||
Sbjct: 77136 ctaaacatcctgaaatggaggg 77115
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>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0052G07
          Length = 156207

 Score =  260 bits (131), Expect = 5e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                         
Query: 116   gcaatgtagtttcatatagtgacggggtaccaggtgagagccatggtattccgtactttt 175
             |||||||||||||||||||||| || || ||||||||||||||||| || || ||||| |
Sbjct: 35847 gcaatgtagtttcatatagtgatggagtgccaggtgagagccatggaatcccctacttct 35788

                                                                         
Query: 176   atctgactactctggatcccactgcaagagatgcattggaggatgaaaggacgtccttta 235
             ||||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 35787 atctgacaacgctagatcccactgcgagagatgcattggaggatgaaaggacctccttta 35728

                                                                         
Query: 236   cccttagtgagttccctcttggcacctgtgggaaggttgatcctgaaaacccaacatgtg 295
             ||||||| |||||||||||||| || ||||||||| ||||||||||||||||||| ||||
Sbjct: 35727 cccttagcgagttccctcttgggacatgtgggaagattgatcctgaaaacccaacttgtg 35668

                                    
Query: 296   caaaacttactcttaccggaaag 318
             |||||||||||||||| ||||||
Sbjct: 35667 caaaacttactcttactggaaag 35645



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 8     gcaagcccgccccgtccgaggccgcggccaccgccaggtggctcgccgcgcagaacacct 67
             |||||||||||||  |||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 36988 gcaagcccgcccccaccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgt 36929

                          
Query: 68    ggggcgtcctcag 80
             |||||||||||||
Sbjct: 36928 ggggcgtcctcag 36916



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 400   tggccaaagaaccatcacttcgagatctttaaactggaaatcgaaaacatattcttgatc 459
             ||||||||||| ||||| ||| | ||||| ||| |||||||| |||||||||| ||||| 
Sbjct: 34616 tggccaaagaatcatcatttccaaatcttcaaattggaaatcaaaaacatatttttgatt 34557

                                             
Query: 460   gactggtttgggggtcctaaacctatatcccc 491
             || ||||||||||||||||| |||||||||||
Sbjct: 34556 gattggtttgggggtcctaagcctatatcccc 34525



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 23    ccgaggccgcggccaccgccaggtggctcgccgcgcagaacacctggggcgtcctcag 80
             |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 52464 ccgaggccgccgccaccgcgaggtggctcgccgcccagaacacgtggggcgtcctcag 52407



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 78    cagcacaatatcaagtgatctaagtggcgctccgtttgg 116
             ||||||||||||||||||||||||||| ||||| |||||
Sbjct: 35982 cagcacaatatcaagtgatctaagtggagctccttttgg 35944



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                         
Query: 317   agttgaagatggttgaccataagtcacctgaagcggatctggccaaaacagcgcttttca 376
             |||||||| || |||||| | | ||| ||||||| ||| ||||||||  ||| ||||| |
Sbjct: 34789 agttgaagttgattgaccctcaatcatctgaagcagatttggccaaagaagcacttttta 34730

                                   
Query: 377   gcaaacatcctgaaatggaggg 398
               ||||||||||||||||||||
Sbjct: 34729 ctaaacatcctgaaatggaggg 34708
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>ref|XM_970068.1| PREDICTED: Tribolium castaneum similar to CG9864-PA (LOC664049),
           mRNA
          Length = 1188

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 24  cgaggccgcggccaccgccag 44
           |||||||||||||||||||||
Sbjct: 483 cgaggccgcggccaccgccag 463
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>ref|NM_073801.2| Caenorhabditis elegans ZC455.4 (UDP-glucuronysltransferase) mRNA,
            complete cds
          Length = 1679

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 558  gaaacccatatccttagcatg 578
            |||||||||||||||||||||
Sbjct: 1559 gaaacccatatccttagcatg 1539
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 23      ccgaggccgcggccaccgcca 43
               |||||||||||||||||||||
Sbjct: 5863481 ccgaggccgcggccaccgcca 5863461
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>emb|Z75554.1|CEZC455 Caenorhabditis elegans Cosmid ZC455, complete sequence
          Length = 28228

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   gaaacccatatccttagcatg 578
             |||||||||||||||||||||
Sbjct: 16759 gaaacccatatccttagcatg 16779
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>gb|M12103.1|HAMDES2 Hamster desmin gene encoding the intermediate filament (IF) protein
           desmin, exon 7
          Length = 247

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 tgggaaggttgatcctgaaaa 284
           |||||||||||||||||||||
Sbjct: 206 tgggaaggttgatcctgaaaa 186
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>ref|NM_112787.2| Arabidopsis thaliana flavonol synthase/ iron ion binding /
            isopenicillin-N synthase AT3G19010 transcript variant
            AT3G19010.1 mRNA, complete cds
          Length = 1235

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1076 aaactggaaatcgaaaacat 1095
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>ref|NM_180282.1| Arabidopsis thaliana flavonol synthase/ iron ion binding /
            isopenicillin-N synthase AT3G19010 transcript variant
            AT3G19010.2 mRNA, complete cds
          Length = 1340

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1181 aaactggaaatcgaaaacat 1200
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>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the
             complete genome
          Length = 291847

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   agcaaacatcctgaaatgga 395
             ||||||||||||||||||||
Sbjct: 68400 agcaaacatcctgaaatgga 68419
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     agcaaacatcctgaaatgga 395
               ||||||||||||||||||||
Sbjct: 1285601 agcaaacatcctgaaatgga 1285582
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>emb|CR696242.2|CNS0G066 Tetraodon nigroviridis full-length cDNA
          Length = 663

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 tccaaactgtacatactgta 622
           ||||||||||||||||||||
Sbjct: 336 tccaaactgtacatactgta 355
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     tcctgaaatggagggctggc 403
               ||||||||||||||||||||
Sbjct: 1065277 tcctgaaatggagggctggc 1065296



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    tcctgaaatggagggctggc 403
              ||||||||||||||||||||
Sbjct: 922245 tcctgaaatggagggctggc 922264
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 21      gtccgaggccgcggccaccg 40
               ||||||||||||||||||||
Sbjct: 2742630 gtccgaggccgcggccaccg 2742649
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>gb|AY035056.1| Arabidopsis thaliana At3g19010 mRNA sequence
          Length = 1350

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1177 aaactggaaatcgaaaacat 1196
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     agcaaacatcctgaaatgga 395
               ||||||||||||||||||||
Sbjct: 1279255 agcaaacatcctgaaatgga 1279236
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>emb|AJ514926.1|MAR514926 Meloidogyne artiellia mRNA for LIN-45 RAF (lin-45 gene)
          Length = 3155

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  tggcgctccgtttggcaatg 121
            ||||||||||||||||||||
Sbjct: 2347 tggcgctccgtttggcaatg 2328
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>emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; segment 12/20
          Length = 313050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    agcaaacatcctgaaatgga 395
              ||||||||||||||||||||
Sbjct: 289404 agcaaacatcctgaaatgga 289385
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>gb|DQ402050.1| Brassica napus AP2/EREBP transcriptional factor WRI1 gene, complete
           cds
          Length = 3609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 tcttaccggaaagttgaagatggt 329
           ||||||||||||||| ||||||||
Sbjct: 727 tcttaccggaaagttcaagatggt 704
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 15      cgccccgtccgaggccgcggccaccgcc 42
               |||||||||||||||| |||||| ||||
Sbjct: 1417774 cgccccgtccgaggcctcggccagcgcc 1417747
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>gb|BC103363.1| Bos taurus similar to Importin alpha-2 subunit (Karyopherin alpha-2
            subunit) (SRP1-alpha) (RAG cohort protein 1), mRNA (cDNA
            clone MGC:127507 IMAGE:7950991), complete cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 603  tccaaactgtacatactgta 622
            ||||||||||||||||||||
Sbjct: 1855 tccaaactgtacatactgta 1874
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 516      ggaccagggctcagtgatgt 535
                ||||||||||||||||||||
Sbjct: 23332795 ggaccagggctcagtgatgt 23332814
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>emb|BX824918.1|CNS0A6VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH82ZC10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1173

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1055 aaactggaaatcgaaaacat 1074
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>emb|BX824884.1|CNS0A6XZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH7ZG07 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1153

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1039 aaactggaaatcgaaaacat 1058
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>emb|BX823322.1|CNS0A6OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS22ZC06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1400 aaactggaaatcgaaaacat 1419
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>gb|AY088124.1| Arabidopsis thaliana clone 41506 mRNA, complete sequence
          Length = 1176

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1076 aaactggaaatcgaaaacat 1095
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>gb|BT002747.1| Arabidopsis thaliana clone C105379 unknown protein (At3g19010) mRNA,
            complete cds
          Length = 1082

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  aaactggaaatcgaaaacat 449
            ||||||||||||||||||||
Sbjct: 1000 aaactggaaatcgaaaacat 1019
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       ggcaaccgcaagcccgcccc 20
               ||||||||||||||||||||
Sbjct: 2567247 ggcaaccgcaagcccgcccc 2567266
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   ggaccagggctcagtgatgt 535
             ||||||||||||||||||||
Sbjct: 58493 ggaccagggctcagtgatgt 58512
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>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0451D05
          Length = 148381

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    ggaccagggctcagtgatgt 535
              ||||||||||||||||||||
Sbjct: 119537 ggaccagggctcagtgatgt 119556
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>dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13E13
          Length = 79186

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   aaactggaaatcgaaaacat 449
             ||||||||||||||||||||
Sbjct: 34988 aaactggaaatcgaaaacat 34969
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>gb|AF220459.1|AF220459 Dolerocypris sinensis 18S ribosomal RNA gene, partial sequence
          Length = 1769

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 590  tttctgaaagacgtccaaactgta 613
            |||| |||||||||||||||||||
Sbjct: 1703 tttcggaaagacgtccaaactgta 1726
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>ref|NM_001034449.1| Bos taurus similar to Importin alpha-2 subunit (Karyopherin alpha-2
            subunit) (SRP1-alpha) (RAG cohort protein 1) (MGC127507),
            mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 603  tccaaactgtacatactgta 622
            ||||||||||||||||||||
Sbjct: 1855 tccaaactgtacatactgta 1874
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>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete
              sequence
          Length = 202842

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    ctttacccttagtgagttcc 250
              ||||||||||||||||||||
Sbjct: 137242 ctttacccttagtgagttcc 137223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,975,094
Number of Sequences: 3902068
Number of extensions: 4975094
Number of successful extensions: 90069
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89742
Number of HSP's gapped (non-prelim): 327
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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