ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12j07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118786 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118727 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118667 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118666 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118607 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118606 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118560 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96429 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96489 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96549 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96596
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118786 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118727 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118667 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118666 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118607 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118606 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118560 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96429 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96489 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96549 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96596
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118735 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118676 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118675 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118616 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118615 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118556 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118555 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118509 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96315 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96374 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96375 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96434 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96435 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96494 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96495 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96541
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508948 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 31509007 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509008 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 31509067 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509068 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 31509127 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509128 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 31509174 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513154 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 11513095 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513094 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 11513035 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513034 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 11512975 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512974 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 11512928 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320602 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 27320543 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 27320483 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 27320482 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctg 27320423 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27320422 aaaacccaaggtttcctccacaaggttcgtccacggagggtgagtca 27320376
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 83648 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 83589 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83588 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 83529 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83528 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 83469 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83468 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 83422
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118696 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118695 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118636 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118635 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118576 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118575 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118529 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96363 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96422 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96423 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96482 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96483 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96542 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96543 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96589
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123411 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 123470 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123471 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 123530 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123531 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 123590 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123591 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 123637 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 15137 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 15196 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15197 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 15256 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15257 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 15316 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15317 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 15363
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141945 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 142004 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142005 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 142064 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142065 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 142124 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142125 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 142171
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 63726 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 63667 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63666 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 63607 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63606 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 63547 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63546 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 63500
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269297 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9269356 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269357 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9269416 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269417 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9269476 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 9269523 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228797 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9228856 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228857 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9228916 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228917 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9228976 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228977 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 9229023 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165385 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9165444 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165445 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9165504 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165505 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9165564 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165565 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 9165611 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057211 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9057270 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057271 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9057330 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9057390 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 9057437
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939282 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 19939341 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939342 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 19939401 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939402 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 19939461 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939462 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 19939508 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10276149 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 10276090 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276089 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10276030 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276029 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10275970 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275969 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 10275923 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388149 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 10388208 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388209 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10388268 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388269 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10388328 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10388329 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtca 10388375
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240984 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9240925 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240924 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9240865 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240864 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9240805 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240804 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 9240758 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 45 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 91 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ggggctaagcgatctgccgaagct 48 |||||||||||||||||| ||||| Sbjct: 22199116 ggggctaagcgatctgccaaagct 22199093
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599464 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 31599523 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599524 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 31599583 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599584 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 31599643 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599644 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 31599690 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509917 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 11509858 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509857 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 11509798 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509797 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 11509738 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509737 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 11509691 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411925 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 27411866 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411865 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 27411806 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 27411805 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctg 27411746 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27411745 aaaacccaaggtttcctccacaaggttcgtccacggagggtgagtca 27411699
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46761 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 46702 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46701 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 46642 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46641 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 46582 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46581 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 46535
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52197 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 52138 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52137 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 52078 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52077 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 52018 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52017 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 51971
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 808 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 868 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 928 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 975
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 82 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 142 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 202 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 249
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 278 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 338 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 398 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 445
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1003 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1063 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1123 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 1170
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 147 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 207 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 267 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 314
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 218 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 278 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 338 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 385
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 874 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 934 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 994 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 1041
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1002 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1062 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1122 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1123 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 1169
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 624 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 684 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 744 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 791
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1003 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1063 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1123 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 1170
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 91 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 151 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 211 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 258
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950558 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 19950617 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950618 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 19950677 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950678 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 19950737 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950738 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 19950784 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10282188 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 10282129 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282128 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10282069 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282068 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10282009 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282008 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 10281962 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394188 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 10394247 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394248 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10394307 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394308 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10394367 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10394368 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtca 10394414
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118729 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118670 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118669 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118610 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118609 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118550 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118549 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118503 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96310 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96369 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96429 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96489 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96536
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118921 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118862 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118861 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118802 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118801 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118742 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118741 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 118695 Score = 418 bits (211), Expect = e-114 Identities = 223/227 (98%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 95973 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96032 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96033 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96092 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96152 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 96199
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117702 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 117643 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117642 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 117583 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117582 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 117523 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117522 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 117476
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 374 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 373 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 314 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 254 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 207
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 224 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 223 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 164 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 104 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 57
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122527 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 122468 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122467 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 122408 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122407 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 122348 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122347 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 122301 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100210 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100269 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100270 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 100329 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100330 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 100389 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100390 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 100436
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 43745 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 43686 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 43685 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 43626 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43625 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 43566 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43565 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 43519 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 21372 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 21431 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21432 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 21491 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21492 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 21551 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21552 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 21598
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 57474 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 57415 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57414 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 57355 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57354 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 57295 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57294 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 57248
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 316 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 315 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 256 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 196 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 149
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122585 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 122526 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122525 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 122466 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122465 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 122406 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122405 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 122359 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100252 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100311 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100312 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 100371 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100372 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 100431 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100432 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 100478
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6563 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 6622 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6623 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 6682 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6683 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 6742 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6743 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 6789
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 626 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 627 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacg 686 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 746 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 793
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123302 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 123243 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123242 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 123183 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123182 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 123123 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123122 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 123076 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100929 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100988 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100989 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 101048 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101049 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 101108 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101109 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 101155
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 410 bits (207), Expect = e-112 Identities = 222/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1210 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1211 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 1270 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1330 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 1377
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Minus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 20809 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 20750 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20749 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 20690 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20689 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctg 20630 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 20629 aaaacccaaggtttcctccacaaggttcgtccacggagggtgagtca 20583
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 94541 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 94600 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94601 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 94660 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94661 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 94720 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 94721 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtca 94767
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 402 bits (203), Expect = e-109 Identities = 221/227 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 28605 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 28664 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28665 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 28724 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28725 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 28784 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 28785 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtca 28831
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 359 bits (181), Expect = 2e-96 Identities = 202/209 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1158 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1217 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 1218 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 1277 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1278 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 1337 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1338 cgcaaggttcgtccacggagggtgagtca 1366
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 359 bits (181), Expect = 2e-96 Identities = 202/209 (96%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131839 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 131780 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 131779 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 131720 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131719 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 131660 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 131659 cgcaaggttcgtccacggagggtgagtca 131631 Score = 359 bits (181), Expect = 2e-96 Identities = 202/209 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104925 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 104984 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 104985 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 105044 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105045 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 105104 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 105105 cgcaaggttcgtccacggagggtgagtca 105133
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 359 bits (181), Expect = 2e-96 Identities = 202/209 (96%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132800 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 132741 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 132740 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 132681 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 132680 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 132621 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 132620 cgcaaggttcgtccacggagggtgagtca 132592 Score = 359 bits (181), Expect = 2e-96 Identities = 202/209 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105849 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 105908 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 105909 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 105968 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105969 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 106028 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106029 cgcaaggttcgtccacggagggtgagtca 106057
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 351 bits (177), Expect = 6e-94 Identities = 201/209 (96%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126708 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 126649 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 126648 ttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 126589 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 126588 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 126529 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 126528 cgcaaggttcgtccacggagggtgagtca 126500 Score = 351 bits (177), Expect = 6e-94 Identities = 201/209 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108214 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 108273 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 108274 ttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 108333 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 108334 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 108393 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 108394 cgcaaggttcgtccacggagggtgagtca 108422
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 351 bits (177), Expect = 6e-94 Identities = 201/209 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 794 gaacggggctaagcgatctgccgaagctgcgggatgtaaaaatgcatcggtaggggagcg 853 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 854 ttccgccttagagggaagcacccgcgagagcgggggtggacgaagcggaagcgagaatgt 913 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 914 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 973 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 974 cgcaaggttcgtccacggagggtgagtca 1002
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 343 bits (173), Expect = 1e-91 Identities = 200/209 (95%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138345 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 138286 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 138285 ttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgt 138226 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138225 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 138166 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 138165 cgcaaggttcgtccacggagggtgagtca 138137 Score = 343 bits (173), Expect = 1e-91 Identities = 200/209 (95%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110752 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 110811 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 110812 ttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgt 110871 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110872 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 110931 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 110932 cgcaaggttcgtccacggagggtgagtca 110960
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 343 bits (173), Expect = 1e-91 Identities = 200/209 (95%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 138550 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 138491 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| Sbjct: 138490 ttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgt 138431 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 138430 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 138371 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 138370 cgcaaggttcgtccacggagggtgagtca 138342 Score = 343 bits (173), Expect = 1e-91 Identities = 200/209 (95%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 110749 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 110808 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| Sbjct: 110809 ttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgt 110868 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 110869 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 110928 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 110929 cgcaaggttcgtccacggagggtgagtca 110957
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 335 bits (169), Expect = 4e-89 Identities = 200/209 (95%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 170 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 171 ttccgc-ttagagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgt 229 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 230 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 289 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 290 cgcaaggttcgtccacggagggtgagtca 318
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 335 bits (169), Expect = 4e-89 Identities = 199/209 (95%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133064 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 133005 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 133004 ttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 132945 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 132944 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 132885 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 132884 cgcaaggttcgtccacggagggtgagtca 132856 Score = 335 bits (169), Expect = 4e-89 Identities = 199/209 (95%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104907 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 104966 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 104967 ttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 105026 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105027 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105086 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 105087 cgcaaggttcgtccacggagggtgagtca 105115
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 329 bits (166), Expect = 2e-87 Identities = 178/182 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526780 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 33526839 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526840 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 33526899 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526900 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 33526959 Query: 183 aa 184 || Sbjct: 33526960 aa 33526961 Score = 141 bits (71), Expect = 1e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 189 caaggtttcctccgcaaggttcgtcca 215 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 81.8 bits (41), Expect = 9e-13 Identities = 56/61 (91%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 527900 cgcccttgcgctgaagatgaacggggctaagcgatctgccaaagctgtgggatgtcaaaa 527959 Query: 63 t 63 | Sbjct: 527960 t 527960 Score = 58.0 bits (29), Expect = 1e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 125 gcggaagcgagaatgtcggcttgagtaac 153 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 5e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 145 ttgagtaacgaaaacattggtgagaatc 172 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 329 bits (166), Expect = 2e-87 Identities = 178/182 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 71977 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 72036 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72037 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 72096 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72097 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 72156 Query: 183 aa 184 || Sbjct: 72157 aa 72158 Score = 56.0 bits (28), Expect = 5e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 145 ttgagtaacgaaaacattggtgagaatc 172 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 327 bits (165), Expect = 9e-87 Identities = 198/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138421 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 138362 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 138361 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 138302 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 138301 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 138242 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 138241 cgcaaggttcgtccacggagggtgagtca 138213 Score = 327 bits (165), Expect = 9e-87 Identities = 198/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111524 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 111583 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 111584 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 111643 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 111644 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 111703 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 111704 cgcaaggttcgtccacggagggtgagtca 111732
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 327 bits (165), Expect = 9e-87 Identities = 198/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 140948 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 140889 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 140888 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 140829 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 140828 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 140769 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 140768 cgcaaggttcgtccacggagggtgagtca 140740 Score = 327 bits (165), Expect = 9e-87 Identities = 198/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112709 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 112768 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 112769 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 112828 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 112829 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 112888 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 112889 cgcaaggttcgtccacggagggtgagtca 112917
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 131616 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 131557 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 131556 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 131497 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 131496 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 131437 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 131436 cgcaaggttcgtccacggagggtgagtca 131408 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 105262 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 105321 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 105322 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 105381 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105382 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105441 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 105442 cgcaaggttcgtccacggagggtgagtca 105470
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135141 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135082 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135081 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135022 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135021 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134962 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134961 cgcaaggttcgtccacggagggtgagtca 134933 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107489 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107548 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107549 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107608 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107609 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107668 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107669 cgcaaggttcgtccacggagggtgagtca 107697
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 130508 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 130449 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 130448 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 130389 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 130388 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 130329 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 130328 cgcaaggttcgtccacggagggtgagtca 130300 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 104127 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 104186 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 104187 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 104246 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 104247 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 104306 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 104307 cgcaaggttcgtccacggagggtgagtca 104335
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134742 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 134683 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 134682 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 134623 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134622 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134563 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134562 cgcaaggttcgtccacggagggtgagtca 134534 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107164 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 107223 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 107224 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 107283 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107284 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107343 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107344 cgcaaggttcgtccacggagggtgagtca 107372
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 141720 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 141661 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 141660 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 141601 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 141600 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 141541 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 141540 cgcaaggttcgtccacggagggtgagtca 141512 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 111608 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 111667 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 111668 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 111727 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 111728 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 111787 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 111788 cgcaaggttcgtccacggagggtgagtca 111816
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2683 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 2742 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 2743 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 2802 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2803 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 2862 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 2863 cgcaaggttcgtccacggagggtgagtca 2891
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2928 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 2987 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 2988 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 3047 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 3048 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 3107 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 3108 cgcaaggttcgtccacggagggtgagtca 3136
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135433 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135374 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||||| || |||||||||||||||||||||| Sbjct: 135373 ttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 135314 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135313 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 135254 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 135253 cgcaaggttcgtccacggagggtgagtca 135225 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106992 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107051 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||||| || |||||||||||||||||||||| Sbjct: 107052 ttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 107111 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107112 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107171 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107172 cgcaaggttcgtccacggagggtgagtca 107200
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135021 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 134962 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 134961 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 134902 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134901 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134842 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134841 cgcaaggttcgtccacggagggtgagtca 134813 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107386 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 107445 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 107446 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 107505 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107506 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107565 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107566 cgcaaggttcgtccacggagggtgagtca 107594
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135139 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135080 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135079 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135020 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135019 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134960 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134959 cgcaaggttcgtccacggagggtgagtca 134931 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107487 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107546 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107547 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107606 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107607 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107666 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107667 cgcaaggttcgtccacggagggtgagtca 107695
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 131609 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 131550 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 131549 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 131490 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 131489 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 131430 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 131429 cgcaaggttcgtccacggagggtgagtca 131401 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 105260 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 105319 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 105320 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 105379 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105380 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105439 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 105440 cgcaaggttcgtccacggagggtgagtca 105468
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134870 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134811 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134810 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134751 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134750 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134691 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134690 cgcaaggttcgtccacggagggtgagtca 134662 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107268 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107327 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107328 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107387 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107388 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107447 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107448 cgcaaggttcgtccacggagggtgagtca 107476
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 319 bits (161), Expect = 2e-84 Identities = 197/209 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1256 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 1315 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 1316 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 1375 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1376 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1435 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1436 cgcaaggttcgtccacggagggtgagtca 1464
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 311 bits (157), Expect = 5e-82 Identities = 197/209 (94%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133832 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 133773 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| |||||||||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 133772 ttccgc-ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 133714 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 133713 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 133654 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 133653 cgcaaggttcgtccacggagggtgagtca 133625 Score = 311 bits (157), Expect = 5e-82 Identities = 197/209 (94%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106450 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 106509 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| |||||||||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 106510 ttccgc-ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 106568 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106569 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106628 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106629 cgcaaggttcgtccacggagggtgagtca 106657
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135779 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135720 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135719 ttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135660 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135659 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 135600 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 135599 cgcaaggttcgtccacggagggtgagtca 135571 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107778 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107837 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107838 ttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107897 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107898 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107957 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107958 cgcaaggttcgtccacggagggtgagtca 107986
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134387 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134328 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134327 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134268 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134267 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134208 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134207 cgcaaggttcgtccacggagggtgagtca 134179 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106649 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106708 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106709 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106768 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106769 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106828 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106829 cgcaaggttcgtccacggagggtgagtca 106857
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1163 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1222 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1223 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 1282 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1283 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1342 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1343 cgcaaggttcgtccacggagggtgagtca 1371
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134522 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134463 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134462 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134403 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134402 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134343 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134342 cgcaaggttcgtccacggagggtgagtca 134314 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106821 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106880 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106881 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106940 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106941 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107000 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 107001 cgcaaggttcgtccacggagggtgagtca 107029
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134520 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134461 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134460 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134401 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134400 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134341 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134340 cgcaaggttcgtccacggagggtgagtca 134312 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106818 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106877 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106878 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106937 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106938 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106997 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106998 cgcaaggttcgtccacggagggtgagtca 107026
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134432 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134373 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134372 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134313 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134312 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134253 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134252 cgcaaggttcgtccacggagggtgagtca 134224 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106696 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106755 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106756 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106815 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106816 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106875 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106876 cgcaaggttcgtccacggagggtgagtca 106904
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 116986 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 116927 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 116926 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 116867 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 116866 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 116807 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 116806 cgcaaggttcgtccacggagggtgagtca 116778 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 91116 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 91175 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 91176 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 91235 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 91236 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 91295 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 91296 cgcaaggttcgtccacggagggtgagtca 91324
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134399 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134340 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134339 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134280 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134279 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134220 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 134219 cgcaaggttcgtccacggagggtgagtca 134191 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106663 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106722 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106723 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106782 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106783 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106842 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 106843 cgcaaggttcgtccacggagggtgagtca 106871
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 311 bits (157), Expect = 5e-82 Identities = 196/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1160 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcg 1219 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||| Sbjct: 1220 ttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgt 1279 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1280 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1339 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1340 cgcaaggttcgtccacggagggtgagtca 1368
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 303 bits (153), Expect = 1e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87421 gaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 87480 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||| |||| |||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 87481 ttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgt 87540 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 87541 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 87600 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 87601 cgcaaggttcgtccacggagggtgagtca 87629
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 303 bits (153), Expect = 1e-79 Identities = 195/209 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 129371 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 129312 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||||||| Sbjct: 129311 ttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgt 129252 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||| Sbjct: 129251 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctc 129192 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 129191 cgcaaggttcgtccacggagggtgagtca 129163 Score = 303 bits (153), Expect = 1e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 103085 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 103144 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||||||| Sbjct: 103145 ttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgt 103204 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||| Sbjct: 103205 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctc 103264 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 103265 cgcaaggttcgtccacggagggtgagtca 103293
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 303 bits (153), Expect = 1e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 89508 gaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 89567 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||| ||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 89568 ttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgt 89627 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 89628 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 89687 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 89688 cgcaaggttcgtccacggagggtgagtca 89716
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| Sbjct: 5379 gaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggtaggggagcg 5438 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||| |||| | ||||| ||| ||| | |||||||||||||||||||||| Sbjct: 5439 ttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagcgagaatgt 5498 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5499 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 5558 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 5559 cgcaaggttcgtccacggagggtgagtca 5587
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 295 bits (149), Expect = 3e-77 Identities = 188/201 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 5064 ctaagcggtctgccgaagctgtgggatgtcgaaatacatcggtaggggagcgttccgcct 5123 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||||||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 5124 tagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 5183 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 5184 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 5243 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 5244 tcgtccacggagggtgagtca 5264
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145391 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 145332 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| || || ||| |||||||||||||||||| Sbjct: 145331 ttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgt 145272 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 145271 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 145212 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 145211 cgcaaggttcgtccacggagggtgagtca 145183 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 113071 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 113130 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||||| | ||| ||| || || ||| |||||||||||||||||| Sbjct: 113131 ttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgt 113190 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 113191 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 113250 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 113251 cgcaaggttcgtccacggagggtgagtca 113279
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| Sbjct: 22546 gaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggtaggggagcg 22487 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||| |||| | ||||| ||| ||| | |||||||||||||||||||||| Sbjct: 22486 ttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagcgagaatgt 22427 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 22426 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 22367 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 22366 cgcaaggttcgtccacggagggtgagtca 22338
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1163 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 1222 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1223 ttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgt 1282 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1283 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1342 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1343 cgcaaggttcgtccacggagggtgagtca 1371
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 295 bits (149), Expect = 3e-77 Identities = 188/201 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1174 ctaagcggtctgccgaagctgtgggatgtcgaaatacatcggtaggggagcgttccgcct 1233 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||||||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 1234 tagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 1293 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1294 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 1353 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1354 tcgtccacggagggtgagtca 1374
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 130708 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcg 130649 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||| | | | |||||||||||||||||||||| Sbjct: 130648 ttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgt 130589 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 130588 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 130529 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 130528 cgcaaggttcgtccacggagggtgagtca 130500 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 104686 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcg 104745 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||||||||| | ||||| ||| | | | |||||||||||||||||||||| Sbjct: 104746 ttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgt 104805 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 104806 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 104865 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 104866 cgcaaggttcgtccacggagggtgagtca 104894
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 295 bits (149), Expect = 3e-77 Identities = 188/201 (93%) Strand = Plus / Minus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 150071 ctaagcggtctgccgaagctgtgggatgtcgaaatacatcggtaggggagcgttccgcct 150012 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||||||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 150011 tagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 149952 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 149951 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 149892 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 149891 tcgtccacggagggtgagtca 149871 Score = 295 bits (149), Expect = 3e-77 Identities = 188/201 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 118595 ctaagcggtctgccgaagctgtgggatgtcgaaatacatcggtaggggagcgttccgcct 118654 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||||||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 118655 tagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 118714 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 118715 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 118774 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 118775 tcgtccacggagggtgagtca 118795
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 5651 gaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 5710 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||| |||| | ||||| ||| ||| | |||||||||||||||||||||| Sbjct: 5711 ttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaagcgagaatgt 5770 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5771 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 5830 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||| ||||| Sbjct: 5831 cgcaaggttcgtccacggagggtaagtca 5859
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 295 bits (149), Expect = 3e-77 Identities = 194/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 5651 gaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 5710 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||||| |||| | ||||| ||| ||| | |||||||||||||||||||||| Sbjct: 5711 ttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaagcgagaatgt 5770 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5771 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 5830 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||| ||||| Sbjct: 5831 cgcaaggttcgtccacggagggtaagtca 5859
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 295 bits (149), Expect = 3e-77 Identities = 188/201 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1174 ctaagcggtctgccgaagctgtgggatgtcgaaatacatcggtaggggagcgttccgcct 1233 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||||||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 1234 tagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 1293 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1294 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 1353 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1354 tcgtccacggagggtgagtca 1374
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 293 bits (148), Expect = 1e-76 Identities = 160/164 (97%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1005 Query: 63 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1065 Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 166 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 287 bits (145), Expect = 7e-75 Identities = 194/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 431 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cg 489 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||| |||||| | ||||| ||| | | | |||||||||||||||||||||| Sbjct: 490 ttccgccttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgt 549 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 550 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 609 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 610 cgcaaggttcgtccacggagggtgagtca 638
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 287 bits (145), Expect = 7e-75 Identities = 193/209 (92%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1156 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1215 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||||||| ||||||||||||||| ||| |||| |||||||||||||||| ||||| Sbjct: 1216 ttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgt 1275 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 | |||||||||||| ||||||||||||||||| |||||||| |||| | |||| |||||| Sbjct: 1276 ccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaagggttcctc 1335 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1336 cgcaaggttcgtccacggagggtgagtca 1364
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 287 bits (145), Expect = 7e-75 Identities = 187/201 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1175 ctaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcct 1234 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||| | |||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 1235 tagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 1294 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1295 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 1354 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1355 tcgtccacggagggtgagtca 1375
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 281 bits (142), Expect = 5e-73 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1175 gaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcg 1234 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||| ||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||| Sbjct: 1235 ttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgt 1294 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1295 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1354 Query: 201 cgcaaggttcgtccacgg-agggtgagtca 229 |||||||||||||||||| ||||||||||| Sbjct: 1355 cgcaaggttcgtccacggtagggtgagtca 1384
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 280 bits (141), Expect = 2e-72 Identities = 192/209 (91%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| Sbjct: 51525 gaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcg 51466 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||||||||| | || ||| | ||| |||||||||||||||||||||| Sbjct: 51465 ttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgt 51406 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 51405 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 51346 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 51345 cgcaaggttcgtccacggagggtgagtca 51317 Score = 280 bits (141), Expect = 2e-72 Identities = 192/209 (91%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| Sbjct: 38303 gaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcg 38362 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||||||||| | || ||| | ||| |||||||||||||||||||||| Sbjct: 38363 ttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgt 38422 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 38423 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 38482 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 38483 cgcaaggttcgtccacggagggtgagtca 38511
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 280 bits (141), Expect = 2e-72 Identities = 199/218 (91%), Gaps = 9/218 (4%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tgcatcggtag 73 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 139208 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtag 139149 Query: 74 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacgaagcggaag 131 ||||||||||||||||||||||||||| ||||| ||| || || ||||||||||||| Sbjct: 139148 gggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaag 139089 Query: 132 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 191 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 139088 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 139029 Query: 192 ggtttcctccgcaaggttcgtccacggagggtgagtca 229 || ||||||||||||||||||||||||||||||||||| Sbjct: 139028 gggttcctccgcaaggttcgtccacggagggtgagtca 138991 Score = 280 bits (141), Expect = 2e-72 Identities = 199/218 (91%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tgcatcggtag 73 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 110852 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtag 110911 Query: 74 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacgaagcggaag 131 ||||||||||||||||||||||||||| ||||| ||| || || ||||||||||||| Sbjct: 110912 gggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaag 110971 Query: 132 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 191 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 110972 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111031 Query: 192 ggtttcctccgcaaggttcgtccacggagggtgagtca 229 || ||||||||||||||||||||||||||||||||||| Sbjct: 111032 gggttcctccgcaaggttcgtccacggagggtgagtca 111069
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 280 bits (141), Expect = 2e-72 Identities = 186/201 (92%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1155 ctaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcct 1214 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||||| ||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct: 1215 tagagagaagcgccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 1274 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||||| Sbjct: 1275 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctctgcaaggt 1334 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1335 tcgtccacggagggtgagtca 1355
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 280 bits (141), Expect = 2e-72 Identities = 192/209 (91%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| Sbjct: 5231 gaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcg 5290 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||||||||| | || ||| | ||| |||||||||||||||||||||| Sbjct: 5291 ttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgt 5350 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5351 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 5410 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 5411 cgcaaggttcgtccacggagggtgagtca 5439
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 274 bits (138), Expect = 1e-70 Identities = 189/206 (91%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 83 |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 145094 cgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttc 145153 Query: 84 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 143 |||| ||| ||||||| | | | ||| || || ||||||||||||||||||||||||| Sbjct: 145154 cgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagcgagaatgtcgg 145213 Query: 144 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 203 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 145214 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgc 145273 Query: 204 aaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||| Sbjct: 145274 aaggttcgtccacggagggtgagtca 145299 Score = 274 bits (138), Expect = 1e-70 Identities = 189/206 (91%) Strand = Plus / Minus Query: 24 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 83 |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 87757 cgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttc 87698 Query: 84 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 143 |||| ||| ||||||| | | | ||| || || ||||||||||||||||||||||||| Sbjct: 87697 cgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagcgagaatgtcgg 87638 Query: 144 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 203 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 87637 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgc 87578 Query: 204 aaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||| Sbjct: 87577 aaggttcgtccacggagggtgagtca 87552
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 272 bits (137), Expect = 4e-70 Identities = 186/201 (92%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115040 ctaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcct 114981 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||| | |||||| | || ||| || || |||||||||||||||||||||||||||||| Sbjct: 114980 tagggagaagcatca-cgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 114922 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 114921 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 114862 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 114861 tcgtccacggagggtgagtca 114841 Score = 272 bits (137), Expect = 4e-70 Identities = 186/201 (92%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 87080 ctaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcct 87139 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||| | |||||| | || ||| || || |||||||||||||||||||||||||||||| Sbjct: 87140 tagggagaagcatca-cgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttga 87198 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 87199 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 87258 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 87259 tcgtccacggagggtgagtca 87279
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 264 bits (133), Expect = 1e-67 Identities = 190/209 (90%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1655 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 1714 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||| |||| |||||||| | ||| ||| | |||||||||||||||||||||| Sbjct: 1715 ttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatgt 1774 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1775 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1834 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1835 cgcaaggttcgtccacggagggtgagtca 1863
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 260 bits (131), Expect = 2e-66 Identities = 191/209 (91%), Gaps = 4/209 (1%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 619 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 678 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 679 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 738 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 | | ||||| | ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 739 c-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 794 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 795 cgcaaggttcgtccacggagggtgagtca 823
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 252 bits (127), Expect = 4e-64 Identities = 192/214 (89%), Gaps = 6/214 (2%) Strand = Plus / Plus Query: 22 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatg------catcggtaggg 75 ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| Sbjct: 1160 aacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggg 1219 Query: 76 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 135 |||||||||||||||||||||||| | || ||| | ||| |||||| |||||||||| Sbjct: 1220 gagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaacggaagcgag 1279 Query: 136 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 195 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 1280 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 1339 Query: 196 tcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| Sbjct: 1340 tcctccgcaaggttcgtccacggagggtgagtca 1373
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 248 bits (125), Expect = 6e-63 Identities = 188/209 (89%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 5195 gaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcg 5254 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| ||| | |||||| | | | || | || || |||||||||||||||||||||| Sbjct: 5255 ttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgt 5314 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5315 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 5374 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 5375 cgcaaggttcgtccacggagggtgagtca 5403
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 248 bits (125), Expect = 6e-63 Identities = 188/209 (89%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 1162 gaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcg 1221 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| ||| | |||||| | | | || | || || |||||||||||||||||||||| Sbjct: 1222 ttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgt 1281 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1282 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1341 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1342 cgcaaggttcgtccacggagggtgagtca 1370
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 248 bits (125), Expect = 6e-63 Identities = 188/209 (89%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 1162 gaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcg 1221 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||||| ||| | |||||| | | | || | || || |||||||||||||||||||||| Sbjct: 1222 ttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgt 1281 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1282 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1341 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 1342 cgcaaggttcgtccacggagggtgagtca 1370
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 242 bits (122), Expect = 4e-61 Identities = 189/210 (90%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||||||||||||||||||||||| || ||| |||||||||||||||| Sbjct: 5404 gaacgggactaagcgatctgccgaagctgtgggatatctaaaaacatcggtaggggagcg 5345 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||| | |||| |||||| ||||| ||| || || ||||||||||||| |||||||| Sbjct: 5344 ttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaagcggaagtgagaatgt 5285 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5284 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 5225 Query: 201 cgcaaggttcgtcc-acggagggtgagtca 229 |||||||||||||| |||| |||||||||| Sbjct: 5224 cgcaaggttcgtccaacggggggtgagtca 5195
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 240 bits (121), Expect = 2e-60 Identities = 192/214 (89%), Gaps = 5/214 (2%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||| || || |||||||||||||| Sbjct: 138104 gaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggag 138045 Query: 79 cgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 135 |||||||||| |||| |||||| | ||| ||| || | ||||||||||||||||| Sbjct: 138044 cgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgag 137985 Query: 136 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 195 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 137984 agtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggt 137925 Query: 196 tcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| Sbjct: 137924 tcctccgcaaggttcgtccacggagggtgagtca 137891 Score = 240 bits (121), Expect = 2e-60 Identities = 192/214 (89%), Gaps = 5/214 (2%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||| || || |||||||||||||| Sbjct: 83773 gaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggag 83832 Query: 79 cgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 135 |||||||||| |||| |||||| | ||| ||| || | ||||||||||||||||| Sbjct: 83833 cgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgag 83892 Query: 136 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 195 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 83893 agtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggt 83952 Query: 196 tcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||||||||||||| Sbjct: 83953 tcctccgcaaggttcgtccacggagggtgagtca 83986
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 238 bits (120), Expect = 6e-60 Identities = 189/211 (89%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1146 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagacatcggtaggggag 1205 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 ||||| || ||| | |||||| |||||||| | || ||||||||||||| |||||| Sbjct: 1206 cgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagtgagaat 1265 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1266 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 1325 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||| Sbjct: 1326 tccgcaaggttcgtccacggagggtgagtca 1356
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 232 bits (117), Expect = 4e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1165 ctaagcggtctgccgaagctgtgggatgctaaaatacatcggtaggggagcgttccgctc 1224 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||| | |||||| | | | || | | || |||||||||||||||||||||||||||||| Sbjct: 1225 tagggagaagcatcagtgtaaacagatgtggacgaagcggaagcgagaatgtcggcttga 1284 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1285 gtaacggaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 1344 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||| ||||| Sbjct: 1345 tcgtccacggagggttagtca 1365
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 232 bits (117), Expect = 4e-58 Identities = 186/209 (88%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 127279 gaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcg 127220 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||| | ||| |||||| ||| ||| || || |||||||||||||||||||||| Sbjct: 127219 ttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgt 127160 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 127159 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 127100 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 127099 cgcaaggttcgtccacggagggtgagtca 127071 Score = 232 bits (117), Expect = 4e-58 Identities = 186/209 (88%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 96168 gaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcg 96227 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||||| | ||| |||||| ||| ||| || || |||||||||||||||||||||| Sbjct: 96228 ttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgt 96287 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 96288 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 96347 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 96348 cgcaaggttcgtccacggagggtgagtca 96376
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 222 bits (112), Expect = 4e-55 Identities = 182/205 (88%), Gaps = 4/205 (1%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaa----aatgcatcggtaggggagcgttcc 84 ||||||| |||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 1111 ctaagcggtctgccgaagctgtgggatgtctattataagatatcggtaggggagcgttcc 1170 Query: 85 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 144 |||||||| |||||| ||| |||| | || ||||||||||||| |||||||||||| Sbjct: 1171 gccttagatagaagcattagcgtaagcagatgtggacgaagcggaagtgagaatgtcggc 1230 Query: 145 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 204 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1231 ttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgca 1290 Query: 205 aggttcgtccacggagggtgagtca 229 ||| ||||||||||||||||||||| Sbjct: 1291 aggctcgtccacggagggtgagtca 1315
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 222 bits (112), Expect = 4e-55 Identities = 187/211 (88%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggtaggggag 78 ||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 124119 gaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcggtaggggag 124060 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 ||||| || ||| | |||||| |||||||| | || ||||||||||||| |||||| Sbjct: 124059 cgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagtgagaat 124000 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 123999 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 123940 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||| Sbjct: 123939 tccgcaaggttcgtccacggagggtgagtca 123909 Score = 222 bits (112), Expect = 4e-55 Identities = 187/211 (88%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggtaggggag 78 ||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 95747 gaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcggtaggggag 95806 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 ||||| || ||| | |||||| |||||||| | || ||||||||||||| |||||| Sbjct: 95807 cgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagtgagaat 95866 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 95867 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 95926 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||| Sbjct: 95927 tccgcaaggttcgtccacggagggtgagtca 95957
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 216 bits (109), Expect = 2e-53 Identities = 184/209 (88%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||||| ||||||| ||||||||||| || | |||||||||||||||| Sbjct: 4178 gaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtaggggagcg 4237 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| || ||||| |||||| | | |||| | | || |||||||| |||| |||||||| Sbjct: 4238 ttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtgagaatgt 4297 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 4298 cggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaagggttcctc 4357 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||| Sbjct: 4358 cgcaaggttcgtccacggagggtgagtca 4386
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 214 bits (108), Expect = 9e-53 Identities = 186/211 (88%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||| | | ||||||||||||||| Sbjct: 1261 gaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggtaggggag 1320 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 |||||||| | | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1321 cgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagtgagaat 1380 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1381 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1440 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||| ||||||||||||||||||||| Sbjct: 1441 tccgcaaggctcgtccacggagggtgagtca 1471
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 214 bits (108), Expect = 9e-53 Identities = 186/211 (88%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1144 gaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggtaggggag 1203 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 |||||||| || | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1204 cgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagtgagaat 1263 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1264 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1323 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||| ||||||||||||||||||||| Sbjct: 1324 tccgcaaggctcgtccacggagggtgagtca 1354
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 214 bits (108), Expect = 9e-53 Identities = 186/211 (88%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggtaggggag 78 ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1157 gaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggtaggggag 1216 Query: 79 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 138 |||||||| || | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1217 cgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagtgagaat 1276 Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1277 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1336 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||||||||| ||||||||||||||||||||| Sbjct: 1337 tccgcaaggctcgtccacggagggtgagtca 1367
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 212 bits (107), Expect = 4e-52 Identities = 107/107 (100%) Strand = Plus / Minus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 5634442
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 212 bits (107), Expect = 4e-52 Identities = 107/107 (100%) Strand = Plus / Minus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 5634431
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 212 bits (107), Expect = 4e-52 Identities = 107/107 (100%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 18443
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 208 bits (105), Expect = 6e-51 Identities = 178/201 (88%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||||| ||||||| ||||||||||| || | ||||||||||||||||||| || Sbjct: 1152 ctaagcgatttgccgaaactgtgggatgtttaa-tacatcggtaggggagcgttctgcta 1210 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 ||||| |||||| | | |||| | | || |||||||| |||| |||||||||||||||| Sbjct: 1211 tagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtgagaatgtcggcttga 1270 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1271 gtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggt 1330 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1331 tcgtccacggagggtgagtca 1351
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 202 bits (102), Expect = 3e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 68 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 127 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| ||||||||||||| ||||||||||||||||||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtca 1353
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 200 bits (101), Expect = 1e-48 Identities = 182/209 (87%), Gaps = 5/209 (2%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||||| |||||||||||||||||| | |||||||||||||||| Sbjct: 1194 gaacgggaataagcgatccgccgaagctgtgggatgtaa-----catcggtaggggagcg 1248 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| |||||| ||||||||| | || ||| | ||| || ||||| |||| |||||||| Sbjct: 1249 ttctgccttatagggaagcacctgcacgagcagtggtggatgaagcagaagtgagaatgt 1308 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1309 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctt 1368 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||||| ||||||||||| Sbjct: 1369 cgcaaggttcgtccacgtagggtgagtca 1397
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 200 bits (101), Expect = 1e-48 Identities = 176/201 (87%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 88 ||||||||| ||||||| ||||||||||| || | ||||||||||||||||||| || Sbjct: 1152 ctaagcgatttgccgaaactgtgggatgtttaagtacatcggtaggggagcgttctgcta 1211 Query: 89 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 148 |||| |||||| | | |||| | | || |||||||| |||| |||||||||||||||| Sbjct: 1212 tagattgaagcatcagtgaaaacagatgtggacgaagcagaagtgagaatgtcggcttga 1271 Query: 149 gtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggt 208 |||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1272 gtaacgcaaacattggtgggaatccaatgccccgaaaacctaagggttcctccgcaaggt 1331 Query: 209 tcgtccacggagggtgagtca 229 ||||||||||||||||||||| Sbjct: 1332 tcgtccacggagggtgagtca 1352
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 200 bits (101), Expect = 1e-48 Identities = 182/209 (87%), Gaps = 5/209 (2%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| |||||| || ||||||||||||||||| ||| ||||||||||||||| Sbjct: 2697 gaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggtaggggagcg 2751 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| || ||||| |||||| ||| ||||||| || |||||||| |||| |||||||| Sbjct: 2752 ttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaagtgagaatgt 2811 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2812 cggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggtttcctc 2871 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 | ||||||||||| |||||||||||||| Sbjct: 2872 tggaaggttcgtccgcggagggtgagtca 2900
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 198 bits (100), Expect = 5e-48 Identities = 191/215 (88%), Gaps = 6/215 (2%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1179 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1238 Query: 81 ttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcgagaa 137 |||||||||| | |||| || | |||||| |||| | |||||| ||| || | |||| Sbjct: 1239 ttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaaccaagaa 1298 Query: 138 tgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaacccaaggtt 195 ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| || | | Sbjct: 1299 tgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacctaaaggt 1358 Query: 196 tcctccgc-aaggttcgtccacggagggtgagtca 229 |||||| | |||||||||||||||||||||||||| Sbjct: 1359 tcctccccaaaggttcgtccacggagggtgagtca 1393
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 196 bits (99), Expect = 2e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtca 130424 Score = 196 bits (99), Expect = 2e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtca 103021 Score = 97.6 bits (49), Expect = 1e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 130632 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 130573 Query: 81 ttccg 85 ||||| Sbjct: 130572 ttccg 130568 Score = 97.6 bits (49), Expect = 1e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 102813 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 102872 Query: 81 ttccg 85 ||||| Sbjct: 102873 ttccg 102877
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 190 bits (96), Expect = 1e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 125 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtca 1573 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggat 55 ||||||| ||||||| ||||||||||||||||||| Sbjct: 1295 gaacgggactaagcggtctgccgaagctgtgggat 1329
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 188 bits (95), Expect = 5e-45 Identities = 107/111 (96%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtca 1392
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 188 bits (95), Expect = 5e-45 Identities = 107/111 (96%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtca 3161
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 184 bits (93), Expect = 8e-44 Identities = 147/165 (89%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtca 3183 Score = 42.1 bits (21), Expect = 0.74 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgt 57 |||||| || ||||||||||||||||||| Sbjct: 2966 ctaagctatttgccgaagctgtgggatgt 2994
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 182 bits (92), Expect = 3e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 125 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 1252 Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1312 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 1313 acctaagggttcctccgcaaggctcgtccacggagggttagtca 1356
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 182 bits (92), Expect = 3e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 66 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 125 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||| Sbjct: 114469 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 114410 Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114409 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114350 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 114349 acctaagggttcctccgcaaggctcgtccacggagggttagtca 114306 Score = 182 bits (92), Expect = 3e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 125 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||| Sbjct: 87519 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 87578 Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 87579 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 87638 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 87639 acctaagggttcctccgcaaggctcgtccacggagggttagtca 87682
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 178 bits (90), Expect = 5e-42 Identities = 180/209 (86%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 189141 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 189198 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 189199 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 189258 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 189259 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 189318 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 || ||||||||||| |||||||||||||| Sbjct: 189319 cggaaggttcgtccgcggagggtgagtca 189347 Score = 178 bits (90), Expect = 5e-42 Identities = 180/209 (86%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 150698 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 150755 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 150756 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 150815 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 150816 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 150875 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 || ||||||||||| |||||||||||||| Sbjct: 150876 cggaaggttcgtccgcggagggtgagtca 150904
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 174 bits (88), Expect = 8e-41 Identities = 145/164 (88%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 125 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtca 1764 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtg 51 ||||||| ||||||| ||||||||||||||| Sbjct: 1549 gaacgggactaagcggtctgccgaagctgtg 1579
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 170 bits (86), Expect = 1e-39 Identities = 179/209 (85%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 190064 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 190121 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 190122 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 190181 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 190182 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 190241 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 || ||||||||||| |||||||||||||| Sbjct: 190242 cggaaggttcgtccgcggagggtgagtca 190270 Score = 170 bits (86), Expect = 1e-39 Identities = 179/209 (85%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 151491 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 151548 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 151549 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 151608 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 200 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 151609 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 151668 Query: 201 cgcaaggttcgtccacggagggtgagtca 229 || ||||||||||| |||||||||||||| Sbjct: 151669 cggaaggttcgtccgcggagggtgagtca 151697
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 165 bits (83), Expect = 7e-38 Identities = 104/111 (93%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtca 1348 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gatctgccgaagctgtgggat 55 ||||||||||||||||||||| Sbjct: 1151 gatctgccgaagctgtgggat 1171
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 165 bits (83), Expect = 7e-38 Identities = 104/111 (93%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtca 1378 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgc 86 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 165 bits (83), Expect = 7e-38 Identities = 104/111 (93%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtca 1542 Score = 42.1 bits (21), Expect = 0.74 Identities = 30/33 (90%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtggg 53 ||||||| ||||||| |||||||||||||||| Sbjct: 1215 gaacgggactaagcggcctgccgaagctgtggg 1247
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 165 bits (83), Expect = 7e-38 Identities = 104/111 (93%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtca 26157 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gatctgccgaagctgtgggat 55 ||||||||||||||||||||| Sbjct: 25960 gatctgccgaagctgtgggat 25980
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 165 bits (83), Expect = 7e-38 Identities = 104/111 (93%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtca 1836 Score = 42.1 bits (21), Expect = 0.74 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgt 57 |||||| || ||||||||||||||||||| Sbjct: 1598 ctaagctatttgccgaagctgtgggatgt 1626
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 163 bits (82), Expect = 3e-37 Identities = 174/204 (85%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgtcaaaatg---catcggtaggggagcgttccg 85 ||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||| Sbjct: 1116 ctaagcggtctgccgaagctgtgagatgtttaaatataacatcggtaggggagcgttccg 1175 Query: 86 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 145 | |||| |||||| ||| ||||| || ||| ||||||||| ||||||||||||| Sbjct: 1176 cattaggttgaagcactagcgtaagcgaatgtggacaaagcggaagtgagaatgtcggct 1235 Query: 146 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 205 ||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||| || || Sbjct: 1236 tgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaaggattcctacggaa 1295 Query: 206 ggttcgtccacggagggtgagtca 229 ||||||||| || ||||||||||| Sbjct: 1296 ggttcgtccgcgtagggtgagtca 1319
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 161 bits (81), Expect = 1e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtca 1368
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 161 bits (81), Expect = 1e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtca 3250
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 159 bits (80), Expect = 5e-36 Identities = 101/108 (93%) Strand = Plus / Plus Query: 122 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 181 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 182 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| |||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtca 1377 Score = 44.1 bits (22), Expect = 0.19 Identities = 51/61 (83%), Gaps = 6/61 (9%) Strand = Plus / Plus Query: 30 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 89 ||||||| | |||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1174 taagcgacccgccgaagctgtgggatgtaaa------tcggtaggggagcgttctgcctt 1227 Query: 90 a 90 | Sbjct: 1228 a 1228
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 157 bits (79), Expect = 2e-35 Identities = 142/163 (87%) Strand = Plus / Plus Query: 67 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 126 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 127 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 186 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 187 cccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 || |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtca 1435
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 1436
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1331 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 1381
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 151006 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 43197
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 157 bits (79), Expect = 2e-35 Identities = 91/95 (95%) Strand = Plus / Plus Query: 3 cgcccttgcgctgcaacagaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 62 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 824 Query: 63 tgcatcggtaggggagcgttccgccttagagggaa 97 ||||||||||||||||||||||||||||||||||| Sbjct: 825 tgcatcggtaggggagcgttccgccttagagggaa 859
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1331 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 1381
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 1436
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 157 bits (79), Expect = 2e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| ||||||||||| | |||||||||||||||||||||||||| Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtca 3105 Score = 46.1 bits (23), Expect = 0.047 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Plus Query: 39 tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 83 ||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2919 tgccgaagctgtgggatgtttaa---catcggtaggggagcgttc 2960
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 157 bits (79), Expect = 2e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtca 1369
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 155 bits (78), Expect = 7e-35 Identities = 183/213 (85%), Gaps = 5/213 (2%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1179 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1238 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||| ||||| ||||||||| |||| ||| |||| |||||| | | | | | ||||| Sbjct: 1239 ttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-atctaaaatgt 1297 Query: 141 cggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcct 199 | ||||||||| ||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 1298 ccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagggttcct 1357 Query: 200 ccgc-aaggttcgtccacgga--gggtgagtca 229 || | |||||||||||||||| |||||||||| Sbjct: 1358 ccccaaaggttcgtccacggatggggtgagtca 1390
>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA Length = 212 Score = 155 bits (78), Expect = 7e-35 Identities = 103/110 (93%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 120 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 179 ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 192 acgaatcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcc 133 Query: 180 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||| |||| ||||||||||||||| ||||||||||||||||||| Sbjct: 132 tcgaaaacctaagggttcctccgcaaggtt-gtccacggagggtgagtca 84
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 149 bits (75), Expect = 4e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| || |||||||||||||| |||||||||| |||||||| ||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtca 969 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggat 55 ||||||||||||||||| | ||||||||||||||| Sbjct: 758 gaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccg 85 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 149 bits (75), Expect = 4e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtca 137850 Score = 149 bits (75), Expect = 4e-33 Identities = 102/111 (91%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtca 47694
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 149 bits (75), Expect = 4e-33 Identities = 99/107 (92%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||| ||||||| | ||||||||||| ||||||| ||||| Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtca 1342 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccg 85 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 149 bits (75), Expect = 4e-33 Identities = 102/111 (91%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||| | | ||||||||||| ||||||| ||||| Sbjct: 1285 cccgaaaacctaagggttccttcactaggttcgtccatggagggttagtca 1335 Score = 48.1 bits (24), Expect = 0.012 Identities = 42/48 (87%) Strand = Plus / Plus Query: 39 tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 86 ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1145 tgccgaagctgtgggatatcgtaagatatcggtaggggagcgttccgc 1192
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 145 bits (73), Expect = 7e-32 Identities = 139/161 (86%) Strand = Plus / Minus Query: 26 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 85 ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2657 gggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgataggggagcgttccg 2598 Query: 86 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 145 ||||||||||||||| | || || | ||| || || ||||||||| ||||||||||| Sbjct: 2597 ccttagagggaagcacctgcacgagtagtggtggaagaggcggaagcgggaatgtcggct 2538 Query: 146 tgagtaacgaaaacattggtgagaatccaatgccccgaaaa 186 | ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2537 tttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 195 ttcctccgcaaggttcgtccacggagggtgagt 227 |||||||||||||||| |||||||||||||||| Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagt 2450
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 7e-32 Identities = 97/105 (92%) Strand = Plus / Minus Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154933 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 154874 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| |||||| |||||||||||| || |||||||||| Sbjct: 154873 aacctaagggttcctctacaaggttcgtccgtggggggtgagtca 154829 Score = 145 bits (73), Expect = 7e-32 Identities = 97/105 (92%) Strand = Plus / Plus Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78959 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 79018 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| |||||| |||||||||||| || |||||||||| Sbjct: 79019 aacctaagggttcctctacaaggttcgtccgtggggggtgagtca 79063 Score = 40.1 bits (20), Expect = 2.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 24 cggggctaagcgatctgccgaagctgtgggat 55 |||| |||||| ||||||||||||| |||||| Sbjct: 155063 cgggactaagcaatctgccgaagctatgggat 155032 Score = 40.1 bits (20), Expect = 2.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtgggat 55 |||| |||||| ||||||||||||| |||||| Sbjct: 78829 cgggactaagcaatctgccgaagctatgggat 78860
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1343
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1343
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1343
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 142/165 (86%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 145 bits (73), Expect = 7e-32 Identities = 97/105 (92%) Strand = Plus / Plus Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1424 gcgggagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1483 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| ||||||||||||| | ||||||||||| Sbjct: 1484 aacctaagggttcctttacaaggttcgtccatgaagggtgagtca 1528
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 145 bits (73), Expect = 7e-32 Identities = 97/105 (92%) Strand = Plus / Plus Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | | |||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 1335 agtctaagggttcctccactaggttcgtccatggagggtgagtca 1379 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcggtaggggagcgttccgcc 87 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 143 bits (72), Expect = 3e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 114 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 173 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 174 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 1611
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 143 bits (72), Expect = 3e-31 Identities = 163/191 (85%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 39 tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaag 98 ||||||| ||||||||||| |||||||||||||||||||||| | |||||| |||| Sbjct: 2849 tgccgaatctgtgggatgt--ttatgcatcggtaggggagcgttctg-cttagattgaag 2905 Query: 99 caaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaa 158 || |||||| || || ||| |||| |||| ||||||||||||||||||| |||||| Sbjct: 2906 cattaacgaaagtggatgtggacaaagcagaagtgagaatgtcggcttgagtagcgaaaa 2965 Query: 159 cattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacgg 218 |||||||||||||||||||||||| ||||| |||| |||||| | |||| |||||||||| Sbjct: 2966 cattggtgagaatccaatgccccggaaacctaaggattcctctggaaggctcgtccacgg 3025 Query: 219 agggtgagtca 229 ||||| ||||| Sbjct: 3026 agggttagtca 3036
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 141 bits (71), Expect = 1e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||| |||| |||||| |||||||| ||||| Sbjct: 3041 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtca 3091
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 141 bits (71), Expect = 1e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 127 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 186 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1323 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccggaaa 1382 Query: 187 cccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 || |||| ||||||| ||||| ||||||| || |||||||||| Sbjct: 1383 cctaagggttcctccacaaggctcgtccatggggggtgagtca 1425 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtgggat 55 |||| ||||||| ||||||||||||||||||| Sbjct: 1154 cgggactaagcggtctgccgaagctgtgggat 1185
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 141 bits (71), Expect = 1e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1532 gacgaagcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 1591 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1592 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 1642
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 141 bits (71), Expect = 1e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 127 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 186 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 187 cccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 || |||| ||||||| | |||||||||| || |||||||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtca 1522
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 141 bits (71), Expect = 1e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 114446 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 114388 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 114387 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 114329 Query: 189 caaggtttcctccgcaaggttcgtcca 215 || |||||||||||||||||||||||| Sbjct: 114328 cagggtttcctccgcaaggttcgtcca 114302 Score = 58.0 bits (29), Expect = 1e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 114561 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 114503 Query: 125 gcggaagcgagaatgtcggcttgagtaac 153 | ||||| |||||||| |||| ||||||| Sbjct: 114502 gtggaagtgagaatgttggctggagtaac 114474
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 141 bits (71), Expect = 1e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 46092 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 46034 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 46033 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 45975 Query: 189 caaggtttcctccgcaaggttcgtcca 215 || |||||||||||||||||||||||| Sbjct: 45974 cagggtttcctccgcaaggttcgtcca 45948 Score = 58.0 bits (29), Expect = 1e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 46207 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 46149 Query: 125 gcggaagcgagaatgtcggcttgagtaac 153 | ||||| |||||||| |||| ||||||| Sbjct: 46148 gtggaagtgagaatgttggctggagtaac 46120
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Minus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 26572 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 26513 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||||||||| | |||||||||||||| ||||| ||||| Sbjct: 26512 ctaaggtttcctttggaaggttcgtccacgaagggtaagtca 26471 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgt 57 ||||||||||||| || ||||||||||||||||||| Sbjct: 26677 gaacggggctaagtaatttgccgaagctgtgggatgt 26641
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Minus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17797 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 17738 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||||||| |||| |||||| |||||||||||||| Sbjct: 17737 ccaagggttcctccggaaggctcgtccgcggagggtgagtca 17696 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3069 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 3128 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||||||| |||| |||||| |||||||||||||| Sbjct: 3129 ccaagggttcctccggaaggctcgtccgcggagggtgagtca 3170
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 139 bits (70), Expect = 4e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 112 gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaat 171 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3510 gggggtggacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaat 3569 Query: 172 ccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||| ||||||| |||| ||||| | | ||| ||||||| | ||||| ||||| Sbjct: 3570 ccaatgccctgaaaacctaagggttccttcactaggctcgtccatgaagggttagtca 3627
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 139 bits (70), Expect = 4e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 |||||| |||| ||||||| | ||| ||||||| || |||| |||| Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtc 1499 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtggg 53 ||||||| ||||||| ||||||||||||||||| Sbjct: 1282 gaacgggactaagcggtctgccgaagctgtggg 1314
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Minus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 39186 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 39127 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 39126 ctaaggattcctccggaaggctcgtccgcggagggtaagtca 39085 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 20214 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 20273 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 20274 ctaaggattcctccggaaggctcgtccgcggagggtaagtca 20315
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 gaagcgagaatgtaggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1414 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| ||||||| | ||||||||||| || |||||||||| Sbjct: 1415 ctaagggttcctccactaggttcgtccatggggggtgagtca 1456
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 137 bits (69), Expect = 2e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||| | ||||||||||||| ||||||||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtca 170134 Score = 137 bits (69), Expect = 2e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||| | ||||||||||||| ||||||||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtca 122792
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 137 bits (69), Expect = 2e-29 Identities = 141/165 (85%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 124 |||||| |||||||||||| |||||| | ||||||| | || || | ||| || ||| Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239 Query: 125 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 184 || || | |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1240 gcagaggtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299 Query: 185 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||| ||||| | |||||||| |||||| ||||||||||| Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtca 1344
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 137 bits (69), Expect = 2e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 127 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 186 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 ggaagcgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1452 Query: 187 cccaaggtttcctccgcaaggttcgtcca 215 || |||| ||||||| | ||||||||||| Sbjct: 1453 cctaagggttcctccactaggttcgtcca 1481 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtg 51 |||| ||||| ||||||||||||||||| Sbjct: 1284 cgggactaagtgatctgccgaagctgtg 1311
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 137 bits (69), Expect = 2e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||| | ||||||||||||| ||||||||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtca 1383
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 137 bits (69), Expect = 2e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1178 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1237 Query: 81 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 140 |||| ||||| |||||| || || | | | |||| ||| || ||||| | ||||||| Sbjct: 1238 ttcccccttaaagggaaacaccccccccaacatgggtggaccaaacggaaaccagaatgt 1297 Query: 141 cggcttgagtaacgaaaacattggtgagaatccaatgcccc 181 | || | ||||||| ||||||||||||||||| |||||||| Sbjct: 1298 ccgccttagtaacgcaaacattggtgagaatctaatgcccc 1338
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 137 bits (69), Expect = 2e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 223 |||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 1569479 tccgaaagcacaaggtttcctccggaaggttcgtccgcggagggt 1569435
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 133 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 193 gtttcctccgcaaggttcgtccacggagggtgagtca 229 | ||||||| | ||||||||||| || |||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtca 1383
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 135 bits (68), Expect = 7e-29 Identities = 104/116 (89%) Strand = Plus / Plus Query: 114 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 173 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 174 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||| Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtca 193222 Score = 135 bits (68), Expect = 7e-29 Identities = 104/116 (89%) Strand = Plus / Minus Query: 114 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 173 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 174 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||| Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtca 143560 Score = 46.1 bits (23), Expect = 0.047 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggat 55 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 46.1 bits (23), Expect = 0.047 Identities = 32/35 (91%) Strand = Plus / Minus Query: 21 gaacggggctaagcgatctgccgaagctgtgggat 55 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 135 bits (68), Expect = 7e-29 Identities = 92/100 (92%) Strand = Plus / Plus Query: 130 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 189 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1715 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacct 1774 Query: 190 aaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1775 aagggttcctccactaggctcgtccatggggggttagtca 1814
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 135 bits (68), Expect = 7e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1560 acctaagggttcctccactaggttcgtccatggggggttagtca 1603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 135 bits (68), Expect = 7e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| |||||| ||||||||||||| || |||| ||||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtca 1975
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 135 bits (68), Expect = 7e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1395 acctaagggttcctccactaggttcgtccatggggggttagtca 1438
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 7e-29 Identities = 153/180 (85%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 50 tgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 109 |||||||| |||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 1164 tgggatgtaaaaa-gcatcggtaggggagcgttccgcggcaggttgaagcgtaagcgaga 1222 Query: 110 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 169 || || || ||||| ||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 1223 gcaggcgtggacgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgaga 1282 Query: 170 atccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||| |||||||||||||||||| |||| | | |||| |||||||||| |||||||||| Sbjct: 1283 atccagtgccccgaaaacccaagggttcccctggaaggctcgtccacggggggtgagtca 1342
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 7e-29 Identities = 153/180 (85%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 50 tgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 109 |||||||| |||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 1177 tgggatgtaaaaa-gcatcggtaggggagcgttccgcggcaggttgaagcgtaagcgaga 1235 Query: 110 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 169 || || || ||||| ||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 1236 gcaggcgtggacgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgaga 1295 Query: 170 atccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||| |||||||||||||||||| |||| | | |||| |||||||||| |||||||||| Sbjct: 1296 atccagtgccccgaaaacccaagggttcccctggaaggctcgtccacggggggtgagtca 1355
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 7e-29 Identities = 153/180 (85%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 50 tgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 109 |||||||| |||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 5751 tgggatgtaaaaa-gcatcggtaggggagcgttccgcggcaggttgaagcgtaagcgaga 5809 Query: 110 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 169 || || || ||||| ||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 5810 gcaggcgtggacgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgaga 5869 Query: 170 atccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||| |||||||||||||||||| |||| | | |||| |||||||||| |||||||||| Sbjct: 5870 atccagtgccccgaaaacccaagggttcccctggaaggctcgtccacggggggtgagtca 5929
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 135 bits (68), Expect = 7e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1559 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1560 acctaagggttcctccactaggttcgtccatggggggttagtca 1603
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 135 bits (68), Expect = 7e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1394 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| |||| ||||||| | ||||||||||| || |||| ||||| Sbjct: 1395 acctaagggttcctccactaggttcgtccatggggggttagtca 1438
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || | Sbjct: 49121 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatac 49062 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||| |||| |||||| |||||||| ||||| Sbjct: 49061 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtca 49011 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || | Sbjct: 5238 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatac 5297 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||||||||||||||||| |||| |||||| |||||||| ||||| Sbjct: 5298 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtca 5348
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtca 1371
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 1659793 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtca 1659843 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 1048951 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtca 1048901
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2112 gacgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 2171 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 2172 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 2222
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| |||| ||| ||| |||||| ||| |||| ||||| Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtca 1479
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 133 bits (67), Expect = 3e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||| ||||| | ||||||||||| | ||||| ||||| Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtca 1405 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggat 55 ||||||| ||||||| ||||||||||||||||||| Sbjct: 1158 gaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccgc 86 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtca 3109
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 1555 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtca 1605
>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA Length = 2957 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1146 gacgaagcagaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatccgatgc 1205 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 || ||||||| ||||||||||||| |||| |||||| |||||||| ||||| Sbjct: 1206 cctgaaaacctaaggtttcctccggaaggctcgtccgcggagggtaagtca 1256
>emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2 Length = 1291 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 265 gacgaatcggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgc 324 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 325 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 375
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 2656993 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtca 2656943 Score = 133 bits (67), Expect = 3e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||| Sbjct: 571928 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtca 571978
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 131 bits (66), Expect = 1e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 || |||| || |||| |||||||| |||| |||||| ||||||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtc 969
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 131 bits (66), Expect = 1e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 || |||| || |||| |||||||| |||| |||||| ||||||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtc 967
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 131 bits (66), Expect = 1e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtc 2313638 Score = 131 bits (66), Expect = 1e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtc 1108209
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 131 bits (66), Expect = 1e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| ||||||| | |||||||||| || |||||||||| Sbjct: 1602 ctaagggttcctccactaggttcgtccgtggggggtgagtca 1643
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 131 bits (66), Expect = 1e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1373 Query: 186 acccaaggtttcctccgcaaggttcgtcca 215 ||| |||| ||||||| | ||||||||||| Sbjct: 1374 acctaagggttcctccactaggttcgtcca 1403 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtg 51 |||| ||||| ||||||||||||||||| Sbjct: 1209 cgggactaagtgatctgccgaagctgtg 1236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 131 bits (66), Expect = 1e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1509 gaagcgagaatgttggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1568 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| |||||| ||||||||||||| || |||| ||||| Sbjct: 1569 ctaagggttcctctacaaggttcgtccatggggggttagtca 1610
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 131 bits (66), Expect = 1e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 | |||| ||||||| | |||||||||| || |||||||||| Sbjct: 1602 ctaagggttcctccactaggttcgtccgtggggggtgagtca 1643
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 129 bits (65), Expect = 4e-27 Identities = 92/101 (91%) Strand = Plus / Plus Query: 128 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 187 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 188 ccaaggtttcctccgcaaggttcgtccacggagggtgagtc 228 | |||| |||||||| |||| |||||| |||||||| |||| Sbjct: 926 ctaagggttcctccggaaggctcgtccgcggagggttagtc 966
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 129 bits (65), Expect = 4e-27 Identities = 95/105 (90%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggt 223 |||||| || |||| |||||||| ||||||||||| |||||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggt 951
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 129 bits (65), Expect = 4e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1167 gaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1226 Query: 81 ttccgccttagagggaa 97 |||| |||||||||||| Sbjct: 1227 ttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 1e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 143 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 201 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 202 gc-aaggttcgtccacggagggt 223 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 129 bits (65), Expect = 4e-27 Identities = 96/105 (91%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 186 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtca 229 ||| |||| |||| | || |||| ||||||||| ||||||||||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtca 114072 Score = 129 bits (65), Expect = 4e-27 Identities = 96/105 (91%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 186 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtca 229 ||| |||| |||| | || |||| ||||||||| ||||||||||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtca 3445 Score = 42.1 bits (21), Expect = 0.74 Identities = 27/29 (93%) Strand = Plus / Minus Query: 29 ctaagcgatctgccgaagctgtgggatgt 57 |||||| || ||||||||||||||||||| Sbjct: 114282 ctaagctatttgccgaagctgtgggatgt 114254 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 catcggtaggggagcgttccg 85 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 catcggtaggggagcgttccg 85 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300 Score = 42.1 bits (21), Expect = 0.74 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctaagcgatctgccgaagctgtgggatgt 57 |||||| || ||||||||||||||||||| Sbjct: 3235 ctaagctatttgccgaagctgtgggatgt 3263
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 127 bits (64), Expect = 2e-26 Identities = 136/160 (85%) Strand = Plus / Minus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtc 228 ||||| |||| ||| |||| |||||| ||| |||| |||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtc 2050514 Score = 127 bits (64), Expect = 2e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 69 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 128 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 129 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 188 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 189 caaggtttcctccgcaaggttcgtccacggagggtgagtc 228 ||||| |||| ||| |||| |||||| ||| |||| |||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtc 1450987
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 127 bits (64), Expect = 2e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| || ||||||| | ||||||||||| || |||||||||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtca 1421 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 atcggtaggggagcgttccg 85 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtg 51 |||| ||||| ||||||||||||||||| Sbjct: 1185 cgggactaagtgatctgccgaagctgtg 1212
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 127 bits (64), Expect = 2e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 126 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 185 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1306 cggaagtgagaatgtcggcttgagtaacgaaaacattggttagaatccaatgccccgaaa 1365 Query: 186 acccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||| || ||||||| | ||||||||||| || |||||||||| Sbjct: 1366 accgttgggttcctccactaggttcgtccatggggggtgagtca 1409 Score = 44.1 bits (22), Expect = 0.19 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 83 |||| ||||| || |||||||||||||| || | ||||| ||||||||||||||||| Sbjct: 1204 cgggactaagtgacctgccgaagctgtgagacataaaaatatgtcggtaggggagcgttc 1263 Query: 84 cg 85 || Sbjct: 1264 cg 1265
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 125 bits (63), Expect = 6e-26 Identities = 96/107 (89%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6983 aagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 7042 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||| ||||| | ||||||||||| | ||||||||||| Sbjct: 7043 aaaacctaaggattcctttactaggttcgtccatgaagggtgagtca 7089
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 125 bits (63), Expect = 6e-26 Identities = 99/111 (89%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1293 gacgaggcggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgc 1352 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1353 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 1403
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 125 bits (63), Expect = 6e-26 Identities = 84/91 (92%) Strand = Plus / Plus Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 2725 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 2784 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||| | ||||||||||| || |||| ||||| Sbjct: 2785 tccactaggttcgtccatggggggttagtca 2815
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 125 bits (63), Expect = 6e-26 Identities = 84/91 (92%) Strand = Plus / Plus Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||| | ||||||||||| || |||| ||||| Sbjct: 3509 tccactaggttcgtccatggggggttagtca 3539
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 125 bits (63), Expect = 6e-26 Identities = 84/91 (92%) Strand = Plus / Plus Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 2747 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 2806 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||| | |||||||||| || |||||||||| Sbjct: 2807 tccactaggttcgtccgtggggggtgagtca 2837
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 125 bits (63), Expect = 6e-26 Identities = 96/107 (89%) Strand = Plus / Plus Query: 123 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 182 |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1334 aagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1393 Query: 183 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||| |||| ||||| | ||||||||||| | ||||||||||| Sbjct: 1394 aaaacctaaggattcctttactaggttcgtccatgaagggtgagtca 1440
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 125 bits (63), Expect = 6e-26 Identities = 99/111 (89%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtca 1350 Score = 46.1 bits (23), Expect = 0.047 Identities = 56/66 (84%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 ||||||| ||||||| |||||||||||||| |||| || |||||||||||||||| Sbjct: 1144 gaacgggactaagcggcctgccgaagctgtgagatggtgaat--catcggtaggggagcg 1201 Query: 81 ttccgc 86 |||||| Sbjct: 1202 ttccgc 1207
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 125 bits (63), Expect = 6e-26 Identities = 78/83 (93%) Strand = Plus / Plus Query: 21 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 80 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1173 gaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1232 Query: 81 ttccgccttagagggaagcaacc 103 ||||||| || |||||| ||||| Sbjct: 1233 ttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Plus Query: 156 aaacattggtgagaatccaatgccccgaaaa 186 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 125 bits (63), Expect = 6e-26 Identities = 99/111 (89%) Strand = Plus / Plus Query: 119 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 178 ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1293 gacgaggcggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgc 1352 Query: 179 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 229 |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||| Sbjct: 1353 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtca 1403
>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2 Length = 655 Score = 125 bits (63), Expect = 6e-26 Identities = 84/91 (92%) Strand = Plus / Plus Query: 139 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 198 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 60 Query: 199 tccgcaaggttcgtccacggagggtgagtca 229 ||| | |||||||||| || |||||||||| Sbjct: 61 tccactaggttcgtccgtggggggtgagtca 91 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,064,738 Number of Sequences: 3902068 Number of extensions: 1064738 Number of successful extensions: 17816 Number of sequences better than 10.0: 444 Number of HSP's better than 10.0 without gapping: 455 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 16410 Number of HSP's gapped (non-prelim): 1356 length of query: 229 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 207 effective length of database: 17,147,199,772 effective search space: 3549470352804 effective search space used: 3549470352804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
