| Clone Name | basd12j04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CERKL_HUMAN (Q49MI3) Ceramide kinase-like protein | 33 | 0.79 | 2 | HIS82_ANAVT (Q3MAX6) Histidinol-phosphate aminotransferase 2 (EC... | 31 | 3.0 | 3 | CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... | 29 | 8.7 |
|---|
>CERKL_HUMAN (Q49MI3) Ceramide kinase-like protein| Length = 558 Score = 32.7 bits (73), Expect = 0.79 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +3 Query: 468 NNIRKVLVILNPNSGFRSSREVFYKKVQSTLKLSG 572 N + + ++LNP S + + +V+Y+KV+ LKL+G Sbjct: 164 NRPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAG 198
>HIS82_ANAVT (Q3MAX6) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 380 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 286 RKLARCFCLGNYGNLLDCRPPFSSRGGLCQTVALTLVPLTQS 411 R L CLG G++L P FS G L QT+ + +V ++++ Sbjct: 107 RSLLIATCLGAQGSILVANPTFSMYGILAQTLGIPVVTVSRN 148
>CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 985 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 315 KLWKSTRLQTTLLIQRRTVSNCCSDLSTTYTEQLPS 422 KLW++ L+TT L+ + N S TT+ ++P+ Sbjct: 238 KLWQTRMLRTTRLMVADEIENALSYYQTTFLREIPA 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,349,168 Number of Sequences: 219361 Number of extensions: 1466106 Number of successful extensions: 3769 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3653 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3767 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)