ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12i15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105069.1| Zea mays PCO099796 mRNA sequence 155 2e-34
2ref|XM_473006.1| Oryza sativa (japonica cultivar-group), predic... 151 4e-33
3dbj|AK064114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
4dbj|AK062853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
5ref|XM_507493.1| PREDICTED Oryza sativa (japonica cultivar-group... 100 1e-17
6ref|XM_466627.1| Oryza sativa (japonica cultivar-group), mRNA 100 1e-17
7ref|XM_506857.2| PREDICTED Oryza sativa (japonica cultivar-group... 100 1e-17
8dbj|AK101400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
9dbj|AK060085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
10dbj|AK058232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
12emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 86 2e-13
13emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 86 2e-13
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
15dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
16ref|XM_474035.1| Oryza sativa (japonica cultivar-group), predic... 42 2.5
17emb|Z54271.1|CEF21D5 Caenorhabditis elegans Cosmid F21D5, comple... 42 2.5
18emb|AL135778.9| Human DNA sequence from clone RP1-119C5 on chrom... 42 2.5
19emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chr... 42 2.5
20emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 42 2.5
21gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p... 42 2.5
22gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6... 42 2.5
23ref|NM_069102.2| Caenorhabditis elegans F21D5.5 (F21D5.5) mRNA, ... 42 2.5
24gb|AF292046.1|AF292046 Caenorhabditis elegans polynucleotide kin... 42 2.5
25gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Canc... 42 2.5
26dbj|AK102214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
27gb|AY454662.1| Uncultured crenarchaeote clone EJ_G03 16S ribosom... 42 2.5
28gb|AY454661.1| Uncultured crenarchaeote clone E_B05 16S ribosoma... 42 2.5
29gb|AY454660.1| Uncultured crenarchaeote clone EJ_H03 16S ribosom... 42 2.5
30emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.5
31gb|AC113586.14| Mus musculus chromosome 8, clone RP23-17D24, com... 40 9.8
32gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome... 40 9.8
33gb|AC112997.10| Mus musculus chromosome 8, clone RP24-484I6, com... 40 9.8
34gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome... 40 9.8
35ref|XM_369266.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 9.8
36gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, com... 40 9.8
37ref|XM_322807.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
38ref|XM_950681.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
39ref|XM_534959.2| PREDICTED: Canis familiaris similar to Ribonucl... 40 9.8
40ref|XM_852465.1| PREDICTED: Canis familiaris similar to Ribonucl... 40 9.8
41gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's H... 40 9.8
42gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome... 40 9.8
43emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BA... 40 9.8
44emb|AL591430.8| Mouse DNA sequence from clone RP23-41B20 on chro... 40 9.8
45gb|AC124904.3| Equus caballus clone CH241-137P22, complete sequence 40 9.8
46gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence 40 9.8
47emb|AL731562.10| Mouse DNA sequence from clone RP23-49B3 on chro... 40 9.8
48gb|AC182390.3| Pan troglodytes BAC clone CH251-614D4 from chromo... 40 9.8
49gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, co... 40 9.8
50gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, com... 40 9.8
51gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map... 40 9.8
52gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, comp... 40 9.8
53gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 9.8
54dbj|AB077227.1| Uncultured euryarchaeote gene for 16S rRNA, part... 40 9.8
55gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, co... 40 9.8
56gb|AC004081.1|AC004081 Homo sapiens PAC clone RP1-320J15 from Xq... 40 9.8
57gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene c... 40 9.8
58dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.8
59gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 9.8
60dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 9.8
61dbj|AP001960.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 9.8 
>gb|AY105069.1| Zea mays PCO099796 mRNA sequence
          Length = 802

 Score =  155 bits (78), Expect = 2e-34
 Identities = 168/198 (84%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||||||||| |||||||||||| ||||| |||| |||  ||||| ||||||| || |
Sbjct: 151 gtggtggttctggtggcccagatgatgaatcgttcaaggaaacattggatgaagtagtgc 210

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | ||||| |||||||||||  ||||   ||| |||||||| |||||||| ||||
Sbjct: 211 aagttatcttagccactgttgctttcatacttgtgtacatccacataatcagaggggagg 270

                                                                       
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaagagaacatccc 692
           || | ||||| ||||| |||||||||||||||||||||||||| || ||||| ||  |||
Sbjct: 271 agctttaccgtcttgccagggactacaccagatatctcgtcaccggtaagaggactgccc 330

                             
Query: 693 ggctgaagcgtgccatgc 710
           | ||||||||||||||||
Sbjct: 331 gactgaagcgtgccatgc 348
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>ref|XM_473006.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1014

 Score =  151 bits (76), Expect = 4e-33
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                       
Query: 526 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
           |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 660 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 719

                                                                       
Query: 586 aactgttgcttttgtactcacgtatatccacatcatcagaggagaggagttgtaccgcct 645
           |||| |||| ||| |||||| ||| ||||| || || |||||||||||||| ||||||||
Sbjct: 720 aactattgcctttatactcatgtacatccatataataagaggagaggagttataccgcct 779

                                                                       
Query: 646 tgcgagggactacaccagatatctcgtcactggcaagagaacatcccggctgaagcgtgc 705
           ||||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| || ||
Sbjct: 780 tgcgagggactacactagatacctggttactggtaagagaacttccagactgaaacgcgc 839

               
Query: 706 catg 709
           ||||
Sbjct: 840 catg 843



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                       
Query: 276 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
           ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 401 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 460

                              
Query: 333 tatatgcctcaagcgggaa 351
           | ||||||||||| |||||
Sbjct: 461 tgtatgcctcaagtgggaa 479



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 358 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
           ||||||||| ||||| |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 498 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 555
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>dbj|AK064114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H12, full
           insert sequence
          Length = 1519

 Score =  151 bits (76), Expect = 4e-33
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                       
Query: 526 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
           |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 628 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 687

                                                                       
Query: 586 aactgttgcttttgtactcacgtatatccacatcatcagaggagaggagttgtaccgcct 645
           |||| |||| ||| |||||| ||| ||||| || || |||||||||||||| ||||||||
Sbjct: 688 aactattgcctttatactcatgtacatccatataataagaggagaggagttataccgcct 747

                                                                       
Query: 646 tgcgagggactacaccagatatctcgtcactggcaagagaacatcccggctgaagcgtgc 705
           ||||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| || ||
Sbjct: 748 tgcgagggactacactagatacctggttactggtaagagaacttccagactgaaacgcgc 807

               
Query: 706 catg 709
           ||||
Sbjct: 808 catg 811



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                       
Query: 276 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
           ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 369 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 428

                              
Query: 333 tatatgcctcaagcgggaa 351
           | ||||||||||| |||||
Sbjct: 429 tgtatgcctcaagtgggaa 447



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 358 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
           ||||||||| ||||| |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 466 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 523
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>dbj|AK062853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A06, full
           insert sequence
          Length = 1185

 Score =  151 bits (76), Expect = 4e-33
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                       
Query: 526 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
           |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 599 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 658

                                                                       
Query: 586 aactgttgcttttgtactcacgtatatccacatcatcagaggagaggagttgtaccgcct 645
           |||| |||| ||| |||||| ||| ||||| || || |||||||||||||| ||||||||
Sbjct: 659 aactattgcctttatactcatgtacatccatataataagaggagaggagttataccgcct 718

                                                                       
Query: 646 tgcgagggactacaccagatatctcgtcactggcaagagaacatcccggctgaagcgtgc 705
           ||||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| || ||
Sbjct: 719 tgcgagggactacactagatacctggttactggtaagagaacttccagactgaaacgcgc 778

               
Query: 706 catg 709
           ||||
Sbjct: 779 catg 782



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                       
Query: 276 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
           ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 340 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 399

                              
Query: 333 tatatgcctcaagcgggaa 351
           | ||||||||||| |||||
Sbjct: 400 tgtatgcctcaagtgggaa 418



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 358 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
           ||||||||| ||||| |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 437 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 494
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>ref|XM_507493.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.21
           mRNA
          Length = 1271

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 535 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 594

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 595 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 654

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 655 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 704
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>ref|XM_466627.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1037

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 548 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 607

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 608 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 667

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 668 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 717
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>ref|XM_506857.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.21
           mRNA
          Length = 1393

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 555 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 614

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 615 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 674

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 675 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 724
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>dbj|AK101400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F09, full
           insert sequence
          Length = 1272

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 535 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 594

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 595 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 654

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 655 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 704
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>dbj|AK060085.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F03, full
           insert sequence
          Length = 1037

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 548 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 607

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 608 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 667

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 668 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 717
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>dbj|AK058232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-C02, full
           insert sequence
          Length = 1393

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 513 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 572
           |||||| ||||| ||||||||| || ||||| |||| ||| |||||| ||||| | ||||
Sbjct: 555 gtggtgattctggtggcccagaagatgaatcattcaaggaatcattggatgaactagtcc 614

                                                                       
Query: 573 aagttgtgttagcaactgttgcttttgtactcacgtatatccacatcatcagaggagagg 632
           ||||| | |||||||| ||||| ||  | ||   ||| ||||| || |||||||| ||||
Sbjct: 615 aagttatcttagcaaccgttgcattcattcttgtgtacatccatataatcagaggtgagg 674

                                                             
Query: 633 agttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
           || |||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 675 agctgtatcgcctcgccagggactacaccagatatcttgttactggcaag 724
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 623      agaggagaggagttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
                |||||||||||||| ||||||||||||||||||||||| ||||| || || ||||| |||
Sbjct: 24643293 agaggagaggagttataccgccttgcgagggactacactagatacctggttactggtaag 24643234

                                           
Query: 683      agaacatcccggctgaagcgtgccatg 709
                ||||| ||| | ||||| || ||||||
Sbjct: 24643233 agaacttccagactgaaacgcgccatg 24643207



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                            
Query: 276      aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
                ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 24645154 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 24645095

                                   
Query: 333      tatatgcctcaagcgggaa 351
                | ||||||||||| |||||
Sbjct: 24645094 tgtatgcctcaagtgggaa 24645076



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 526      tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
                |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 24644165 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 24644106

                                    
Query: 586      aactgttgcttttgtactca 605
                |||| |||| ||| ||||||
Sbjct: 24644105 aactattgcctttatactca 24644086



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 368      ttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
                ||||| |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 24644317 ttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 24644270



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 296      cttgttgttgctgcttgccat 316
                |||||||||||||||||||||
Sbjct: 32392625 cttgttgttgctgcttgccat 32392645
to top
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
             sequence
          Length = 97077

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 623   agaggagaggagttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
             |||||||||||||| ||||||||||||||||||||||| ||||| || || ||||| |||
Sbjct: 82280 agaggagaggagttataccgccttgcgagggactacactagatacctggttactggtaag 82221

                                        
Query: 683   agaacatcccggctgaagcgtgccatg 709
             ||||| ||| | ||||| || ||||||
Sbjct: 82220 agaacttccagactgaaacgcgccatg 82194



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                         
Query: 276   aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
             ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 84140 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 84081

                                
Query: 333   tatatgcctcaagcgggaa 351
             | ||||||||||| |||||
Sbjct: 84080 tgtatgcctcaagtgggaa 84062



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 526   tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
             |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 83150 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 83091

                                 
Query: 586   aactgttgcttttgtactca 605
             |||| |||| ||| ||||||
Sbjct: 83090 aactattgcctttatactca 83071



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 374   atggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
             |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 83296 atggaatctttgaacaaagctatagctggaactaaaaagcaa 83255
to top
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 623   agaggagaggagttgtaccgccttgcgagggactacaccagatatctcgtcactggcaag 682
             |||||||||||||| ||||||||||||||||||||||| ||||| || || ||||| |||
Sbjct: 32816 agaggagaggagttataccgccttgcgagggactacactagatacctggttactggtaag 32757

                                        
Query: 683   agaacatcccggctgaagcgtgccatg 709
             ||||| ||| | ||||| || ||||||
Sbjct: 32756 agaacttccagactgaaacgcgccatg 32730



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/79 (87%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                         
Query: 276   aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 332
             ||||| ||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||
Sbjct: 34677 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 34618

                                
Query: 333   tatatgcctcaagcgggaa 351
             | ||||||||||| |||||
Sbjct: 34617 tgtatgcctcaagtgggaa 34599



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 526   tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagttgtgttagc 585
             |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| |||| ||
Sbjct: 33688 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagttttgttggc 33629

                                 
Query: 586   aactgttgcttttgtactca 605
             |||| |||| ||| ||||||
Sbjct: 33628 aactattgcctttatactca 33609



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 368   ttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 415
             ||||| |||||||||||||||||||| || | |||| | |||||||||
Sbjct: 33840 ttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 33793
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                            
Query: 611      atccacatcatcagaggagaggagttgtaccgccttgcgagggactacaccagatatctc 670
                ||||| || |||||||| |||||| |||| ||||| || |||||||||||||||||||| 
Sbjct: 23767604 atccatataatcagaggtgaggagctgtatcgcctcgccagggactacaccagatatctt 23767663

                            
Query: 671      gtcactggcaag 682
                || |||||||||
Sbjct: 23767664 gttactggcaag 23767675
to top
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 611   atccacatcatcagaggagaggagttgtaccgccttgcgagggactacaccagatatctc 670
             ||||| || |||||||| |||||| |||| ||||| || |||||||||||||||||||| 
Sbjct: 78188 atccatataatcagaggtgaggagctgtatcgcctcgccagggactacaccagatatctt 78247

                         
Query: 671   gtcactggcaag 682
             || |||||||||
Sbjct: 78248 gttactggcaag 78259
to top
>ref|XM_474035.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 296 cttgttgttgctgcttgccat 316
           |||||||||||||||||||||
Sbjct: 21  cttgttgttgctgcttgccat 1
to top
>emb|Z54271.1|CEF21D5 Caenorhabditis elegans Cosmid F21D5, complete sequence
          Length = 21173

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 391   agcaatggatggagcaaaaaa 411
             |||||||||||||||||||||
Sbjct: 17738 agcaatggatggagcaaaaaa 17718
to top
>emb|AL135778.9| Human DNA sequence from clone RP1-119C5 on chromosome 6 Contains the 5'
             end of the BMP6 gene for bone morphogenetic protein 6 and
             a CpG island, complete sequence
          Length = 152786

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   ttgcaagctggaagagaaagt 285
             |||||||||||||||||||||
Sbjct: 48628 ttgcaagctggaagagaaagt 48608
to top
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the
             5' end of the gene for the likely ortholog of H. sapiens
             target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik),
             a glyceraldehyde-3-phosphate dehydrogenase (Gapd)
             pseudogene, the gene for a novel Leucine Rich Repeat
             domain-containing protein (4930449E07Rik), the Atpaf2 gene
             for ATP synthase mitochondrial F1 complex assembly factor
             2, the gene for a novel protein (4933439F18Rik), an acid
             phosphatase 1 soluble (Acp1) pseudogene, a ribosomal
             protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for
             developmentally regulated GTP binding protein 2, the 5'
             end of the Myo15 gene for myosin XV and four CpG islands,
             complete sequence
          Length = 207440

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   ggagcaaaaaagcaacagtct 421
             |||||||||||||||||||||
Sbjct: 85209 ggagcaaaaaagcaacagtct 85229
to top
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
            complete sequence
          Length = 123480

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 296  cttgttgttgctgcttgccat 316
            |||||||||||||||||||||
Sbjct: 9426 cttgttgttgctgcttgccat 9446
to top
>gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p, complete sequence
          Length = 165873

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 367   tttctctatggaatctttgaa 387
             |||||||||||||||||||||
Sbjct: 23374 tttctctatggaatctttgaa 23354
to top
>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete
              sequence
          Length = 230839

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 430    cttcctgatggagcaaatggc 450
              |||||||||||||||||||||
Sbjct: 114193 cttcctgatggagcaaatggc 114213
to top
>ref|NM_069102.2| Caenorhabditis elegans F21D5.5 (F21D5.5) mRNA, complete cds
          Length = 1350

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 agcaatggatggagcaaaaaa 411
           |||||||||||||||||||||
Sbjct: 29  agcaatggatggagcaaaaaa 49
to top
>gb|AF292046.1|AF292046 Caenorhabditis elegans polynucleotide kinase 3' phosphatase (4J500)
           mRNA, complete cds
          Length = 1350

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 agcaatggatggagcaaaaaa 411
           |||||||||||||||||||||
Sbjct: 29  agcaatggatggagcaaaaaa 49
to top
>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 430   cttcctgatggagcaaatggc 450
             |||||||||||||||||||||
Sbjct: 40731 cttcctgatggagcaaatggc 40751
to top
>dbj|AK102214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087K04, full
           insert sequence
          Length = 1696

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 296 cttgttgttgctgcttgccat 316
           |||||||||||||||||||||
Sbjct: 40  cttgttgttgctgcttgccat 20
to top
>gb|AY454662.1| Uncultured crenarchaeote clone EJ_G03 16S ribosomal RNA gene,
           partial sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 94  attgggttttgaggtttagct 114
           |||||||||||||||||||||
Sbjct: 915 attgggttttgaggtttagct 895
to top
>gb|AY454661.1| Uncultured crenarchaeote clone E_B05 16S ribosomal RNA gene,
           partial sequence
          Length = 1045

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 94  attgggttttgaggtttagct 114
           |||||||||||||||||||||
Sbjct: 926 attgggttttgaggtttagct 906
to top
>gb|AY454660.1| Uncultured crenarchaeote clone EJ_H03 16S ribosomal RNA gene,
           partial sequence
          Length = 988

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 94  attgggttttgaggtttagct 114
           |||||||||||||||||||||
Sbjct: 877 attgggttttgaggtttagct 857
to top
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete
             sequence
          Length = 63554

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   cttgttgttgctgcttgccat 316
             |||||||||||||||||||||
Sbjct: 54115 cttgttgttgctgcttgccat 54135
to top
>gb|AC113586.14| Mus musculus chromosome 8, clone RP23-17D24, complete sequence
          Length = 206445

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    ggaaatggaggaaataataa 495
              ||||||||||||||||||||
Sbjct: 148279 ggaaatggaggaaataataa 148260
to top
>gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome 5, complete sequence
          Length = 194291

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   tactcacgtatatccacatc 619
             ||||||||||||||||||||
Sbjct: 26663 tactcacgtatatccacatc 26682
to top
>gb|AC112997.10| Mus musculus chromosome 8, clone RP24-484I6, complete sequence
          Length = 191413

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    ggaaatggaggaaataataa 495
              ||||||||||||||||||||
Sbjct: 183311 ggaaatggaggaaataataa 183330
to top
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence
          Length = 232228

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    aggacaggggtctggtggaa 479
              ||||||||||||||||||||
Sbjct: 163788 aggacaggggtctggtggaa 163807
to top
>ref|XM_369266.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG06198.4) partial mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  acccgccgtcaccgttcttcctcg 44
           ||||||||| ||||||||||||||
Sbjct: 625 acccgccgtaaccgttcttcctcg 602
to top
>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence
          Length = 213155

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   tactcacgtatatccacatc 619
             ||||||||||||||||||||
Sbjct: 63404 tactcacgtatatccacatc 63385
to top
>ref|XM_322807.1| Neurospora crassa OR74A hypothetical protein (NCU03550.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  caaggcttgttgttgctgct 310
            ||||||||||||||||||||
Sbjct: 1569 caaggcttgttgttgctgct 1550
to top
>ref|XM_950681.1| Neurospora crassa OR74A hypothetical protein (NCU03550.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  caaggcttgttgttgctgct 310
            ||||||||||||||||||||
Sbjct: 1569 caaggcttgttgttgctgct 1550
to top
>ref|XM_534959.2| PREDICTED: Canis familiaris similar to Ribonuclease P protein
           subunit p30 (RNaseP protein p30) (RNase P subunit 2),
           transcript variant 1 (LOC477763), mRNA
          Length = 1300

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 tcttgcaagctggaagagaa 282
           ||||||||||||||||||||
Sbjct: 809 tcttgcaagctggaagagaa 790
to top
>ref|XM_852465.1| PREDICTED: Canis familiaris similar to Ribonuclease P protein
           subunit p30 (RNaseP protein p30) (RNase P subunit 2),
           transcript variant 2 (LOC477763), mRNA
          Length = 1264

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 tcttgcaagctggaagagaa 282
           ||||||||||||||||||||
Sbjct: 773 tcttgcaagctggaagagaa 754
to top
>gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217309

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    gttagcaactgttgcttttg 599
              ||||||||||||||||||||
Sbjct: 185053 gttagcaactgttgcttttg 185072
to top
>gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome 16, complete sequence
          Length = 188081

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   aggacaggggtctggtggaa 479
             ||||||||||||||||||||
Sbjct: 42818 aggacaggggtctggtggaa 42837
to top
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14
          Length = 107947

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   caaggcttgttgttgctgct 310
             ||||||||||||||||||||
Sbjct: 67669 caaggcttgttgttgctgct 67688
to top
>emb|AL591430.8| Mouse DNA sequence from clone RP23-41B20 on chromosome 2 Contains the
             5' end of the Cdh22 gene for cadherin 22, the Ovcov1 gene
             for ovarian cancer overexpressed 1, the Elmo2 gene for
             engulfment and cell motility 2, ced-12 homolog (C.
             elegans), the 3' end of a putative novel zinc finger
             protein and three CpG islands, complete sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   tgttgctgcttgccataagaggct 324
             |||||||||||||| |||||||||
Sbjct: 22579 tgttgctgcttgccctaagaggct 22556
to top
>gb|AC124904.3| Equus caballus clone CH241-137P22, complete sequence
          Length = 95553

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   tcttgggagaaattgcaaaa 224
             ||||||||||||||||||||
Sbjct: 63851 tcttgggagaaattgcaaaa 63870
to top
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence
          Length = 202157

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  tcttgggagaaattgcaaaa 224
            ||||||||||||||||||||
Sbjct: 8623 tcttgggagaaattgcaaaa 8642
to top
>emb|AL731562.10| Mouse DNA sequence from clone RP23-49B3 on chromosome 13, complete
             sequence
          Length = 81954

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 570   tccaagttgtgttagcaactgttg 593
             |||||||||||||||| |||||||
Sbjct: 67280 tccaagttgtgttagctactgttg 67257
to top
>gb|AC182390.3| Pan troglodytes BAC clone CH251-614D4 from chromosome 17, complete
             sequence
          Length = 197192

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   caaatggctaggattacagg 462
             ||||||||||||||||||||
Sbjct: 54339 caaatggctaggattacagg 54358
to top
>gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, complete sequence
          Length = 178448

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   caaatggctaggattacagg 462
             ||||||||||||||||||||
Sbjct: 38303 caaatggctaggattacagg 38284
to top
>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence
          Length = 199456

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    caaatggctaggattacagg 462
              ||||||||||||||||||||
Sbjct: 147609 caaatggctaggattacagg 147590
to top
>gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete
             sequence
          Length = 82652

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ggagaaattgcaaaatactt 229
             ||||||||||||||||||||
Sbjct: 11874 ggagaaattgcaaaatactt 11855
to top
>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence
          Length = 161720

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    ggaaatggaggaaataataa 495
              ||||||||||||||||||||
Sbjct: 136277 ggaaatggaggaaataataa 136258
to top
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     aatacttcctcaacattctg 242
               ||||||||||||||||||||
Sbjct: 2697047 aatacttcctcaacattctg 2697028
to top
>dbj|AB077227.1| Uncultured euryarchaeote gene for 16S rRNA, partial sequence,
           clone:KuA17
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  tgggttttgaggtttagctc 115
           ||||||||||||||||||||
Sbjct: 915 tgggttttgaggtttagctc 896
to top
>gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, complete sequence
          Length = 161139

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   caaatggctaggattacagg 462
             ||||||||||||||||||||
Sbjct: 78365 caaatggctaggattacagg 78346
to top
>gb|AC004081.1|AC004081 Homo sapiens PAC clone RP1-320J15 from Xq23, complete sequence
          Length = 149409

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 289   tccaaggcttgttgttgctgcttg 312
             |||| |||||||||||||||||||
Sbjct: 48333 tccatggcttgttgttgctgcttg 48310
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>gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence
          Length = 95713

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ggagaaattgcaaaatactt 229
             ||||||||||||||||||||
Sbjct: 66924 ggagaaattgcaaaatactt 66905
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>dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-677M14, complete
              sequence
          Length = 187960

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    caaatggctaggattacagg 462
              ||||||||||||||||||||
Sbjct: 168103 caaatggctaggattacagg 168084
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tcttgggagaaattgcaaaa 224
              ||||||||||||||||||||
Sbjct: 516817 tcttgggagaaattgcaaaa 516836
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>dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:496L13, complete
              sequence
          Length = 182676

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    tttttctagatcttgcaagc 272
              ||||||||||||||||||||
Sbjct: 126578 tttttctagatcttgcaagc 126559
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>dbj|AP001960.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2064I15, complete
              sequence
          Length = 140730

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    tttttctagatcttgcaagc 272
              ||||||||||||||||||||
Sbjct: 125475 tttttctagatcttgcaagc 125494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,493,397
Number of Sequences: 3902068
Number of extensions: 6493397
Number of successful extensions: 224196
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 223866
Number of HSP's gapped (non-prelim): 330
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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