ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd12h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 644 0.0
2ref|NM_193577.1| Oryza sativa (japonica cultivar-group), predic... 642 0.0
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 274 4e-70
4dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 274 4e-70
5gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence 180 4e-42
6ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protei... 46 0.15
7gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Can... 44 0.59
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
9dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
10dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
11dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 44 0.59
12gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence 42 2.3
13gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Can... 42 2.3
14gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Can... 42 2.3
15gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease ... 42 2.3
16ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain ... 40 9.2
17gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.2
18gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 9.2
19gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosom... 40 9.2
20gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, com... 40 9.2
21ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA 40 9.2
22emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in... 40 9.2
23emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 i... 40 9.2
24gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 40 9.2
25emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in ... 40 9.2
26emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 9.2
27emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on ch... 40 9.2
28emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119... 40 9.2
29emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 9.2
30emb|AL161982.1|HSM802585 Homo sapiens genomic DNA; cDNA DKFZp761... 40 9.2
31emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in... 40 9.2
32emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in... 40 9.2
33emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, co... 40 9.2
34ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 9.2
35emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on ch... 40 9.2
36emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20,... 40 9.2
37emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in ... 40 9.2
38emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22,... 40 9.2
39emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on ch... 40 9.2
40gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc... 40 9.2
41ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mR... 40 9.2
42emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in ... 40 9.2
43gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete ... 40 9.2
44emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 i... 40 9.2
45emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 i... 40 9.2
46emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 i... 40 9.2
47emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, compl... 40 9.2
48emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in... 40 9.2
49emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in... 40 9.2
50gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining prot... 40 9.2
51gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, comple... 40 9.2 
>dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full
            insert sequence
          Length = 1245

 Score =  644 bits (325), Expect = 0.0
 Identities = 499/557 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacatatccttcgtgagccttcttgctgatcctcgctattgtggaatgccatatcctgaa 64
            |||||||| || || ||||| ||||||||||| || |||||||||||| |||||||||||
Sbjct: 526  tacatatcttttgtcagcctccttgctgatccccgatattgtggaatggcatatcctgaa 585

                                                                        
Query: 65   aaggaagaagtccgtacccttctaaggcaggacccaaatttctggaaaaataggcccttg 124
            ||||||||||||||||||||||||||||||||||| || || ||||   ||||||| || 
Sbjct: 586  aaggaagaagtccgtacccttctaaggcaggaccctaacttttggacgcataggccttta 645

                                                                        
Query: 125  tctgaaatgatgatacgagcagcaacagatgatgtgcgcttccttctcaatatacatgag 184
            |||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||
Sbjct: 646  tctgaaatgatgattcgagcagccacagatgatgtccgcttccttctcagtatacatgag 705

                                                                        
Query: 185  aaaatgatggagaagttaagcaaagtatcctcatggcgtctggcagtacgaagtgagcta 244
            ||||||||||||||||||||||||||||| | |||||||||| |||| || |||||||||
Sbjct: 706  aaaatgatggagaagttaagcaaagtatctttatggcgtctgtcagttcgcagtgagcta 765

                                                                        
Query: 245  tactgcaggtgcttttgcataaatgacaaccagcaggcagattggccacctcttccaact 304
            |||||||||||||||||||||||||||||| || | || |||||||||||||||||||||
Sbjct: 766  tactgcaggtgcttttgcataaatgacaacaagtatgcggattggccacctcttccaact 825

                                                                        
Query: 305  gtccctgatgacattgaagctgaagtccgtgttcctgaagtggatatcctttcgctctta 364
            ||||||||||| |||||| |||| ||   ||||||||| ||||||||||| ||  |||| 
Sbjct: 826  gtccctgatgaaattgaacctgatgtttatgttcctgaggtggatatcctgtcagtcttg 885

                                                                        
Query: 365  gatgtgcctcctggaaaaatgggacgcgttattggcagaaaaggatcgtcaataatggcc 424
            |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||  
Sbjct: 886  gatgtgcctcctggcaaaatggggcgtgttattggcagaaaaggatcatcaataatggaa 945

                                                                        
Query: 425  gtgaaagaatcttgcaatgttgaaatccatatcggtggtgcaaaggggcctccagatagg 484
            ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 946  gtgaaagcatcttgcaatgttgaaatccatattggtggtgcaaagggacctccagacagg 1005

                                                                        
Query: 485  gtattcatcattggaccagtgaaggaagtcagaaaggcggaggctatcctgaggggccga 544
            ||||||||||||||||||||| ||||||||||||| || |||||||||||  | ||||| 
Sbjct: 1006 gtattcatcattggaccagtgcaggaagtcagaaaagctgaggctatcctccgaggccgc 1065

                             
Query: 545  atgctggaattttagag 561
            |||||||| || |||||
Sbjct: 1066 atgctggagttctagag 1082



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 614  atacagaaatgcatgtggtact 635
            ||||||||||||||||||||||
Sbjct: 1156 atacagaaatgcatgtggtact 1177
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>ref|NM_193577.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  642 bits (324), Expect = 0.0
 Identities = 492/548 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacatatccttcgtgagccttcttgctgatcctcgctattgtggaatgccatatcctgaa 64
            |||||||| || || ||||| ||||||||||| || |||||||||||| |||||||||||
Sbjct: 655  tacatatcttttgtcagcctccttgctgatccccgatattgtggaatggcatatcctgaa 714

                                                                        
Query: 65   aaggaagaagtccgtacccttctaaggcaggacccaaatttctggaaaaataggcccttg 124
            ||||||||||||||||||||||||||||||||||| || || ||||   ||||||| || 
Sbjct: 715  aaggaagaagtccgtacccttctaaggcaggaccctaacttttggacgcataggccttta 774

                                                                        
Query: 125  tctgaaatgatgatacgagcagcaacagatgatgtgcgcttccttctcaatatacatgag 184
            |||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||
Sbjct: 775  tctgaaatgatgattcgagcagccacagatgatgtccgcttccttctcagtatacatgag 834

                                                                        
Query: 185  aaaatgatggagaagttaagcaaagtatcctcatggcgtctggcagtacgaagtgagcta 244
            ||||||||||||||||||||||||||||| | |||||||||| |||| || |||||||||
Sbjct: 835  aaaatgatggagaagttaagcaaagtatctttatggcgtctgtcagttcgcagtgagcta 894

                                                                        
Query: 245  tactgcaggtgcttttgcataaatgacaaccagcaggcagattggccacctcttccaact 304
            |||||||||||||||||||||||||||||| || | || |||||||||||||||||||||
Sbjct: 895  tactgcaggtgcttttgcataaatgacaacaagtatgcggattggccacctcttccaact 954

                                                                        
Query: 305  gtccctgatgacattgaagctgaagtccgtgttcctgaagtggatatcctttcgctctta 364
            ||||||||||| |||||| |||| ||   ||||||||| ||||||||||| ||  |||| 
Sbjct: 955  gtccctgatgaaattgaacctgatgtttatgttcctgaggtggatatcctgtcagtcttg 1014

                                                                        
Query: 365  gatgtgcctcctggaaaaatgggacgcgttattggcagaaaaggatcgtcaataatggcc 424
            |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||  
Sbjct: 1015 gatgtgcctcctggcaaaatggggcgtgttattggcagaaaaggatcatcaataatggaa 1074

                                                                        
Query: 425  gtgaaagaatcttgcaatgttgaaatccatatcggtggtgcaaaggggcctccagatagg 484
            ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1075 gtgaaagcatcttgcaatgttgaaatccatattggtggtgcaaagggacctccagacagg 1134

                                                                        
Query: 485  gtattcatcattggaccagtgaaggaagtcagaaaggcggaggctatcctgaggggccga 544
            ||||||||||||||||||||| ||||||||||||| || |||||||||||  | ||||| 
Sbjct: 1135 gtattcatcattggaccagtgcaggaagtcagaaaagctgaggctatcctccgaggccgc 1194

                    
Query: 545  atgctgga 552
            ||||||||
Sbjct: 1195 atgctgga 1202
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  274 bits (138), Expect = 4e-70
 Identities = 183/198 (92%)
 Strand = Plus / Minus

                                                                            
Query: 114      ataggcccttgtctgaaatgatgatacgagcagcaacagatgatgtgcgcttccttctca 173
                ||||||| || |||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 21697009 ataggcctttatctgaaatgatgattcgagcagccacagatgatgtccgcttccttctca 21696950

                                                                            
Query: 174      atatacatgagaaaatgatggagaagttaagcaaagtatcctcatggcgtctggcagtac 233
                 ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |
Sbjct: 21696949 gtatacatgagaaaatgatggagaagttaagcaaagtatctttatggcgtctgtcagttc 21696890

                                                                            
Query: 234      gaagtgagctatactgcaggtgcttttgcataaatgacaaccagcaggcagattggccac 293
                | ||||||||||||||||||||||||||||||||||||||| || | || ||||||||||
Sbjct: 21696889 gcagtgagctatactgcaggtgcttttgcataaatgacaacaagtatgcggattggccac 21696830

                                  
Query: 294      ctcttccaactgtccctg 311
                ||||||||||||||||||
Sbjct: 21696829 ctcttccaactgtccctg 21696812



 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                            
Query: 334      tgttcctgaagtggatatcctttcgctcttagatgtgcctcctggaaaaatgggacgcgt 393
                ||||||||| ||||||||||| ||  |||| |||||||||||||| |||||||| || ||
Sbjct: 21696432 tgttcctgaggtggatatcctgtcagtcttggatgtgcctcctggcaaaatggggcgtgt 21696373

                                                                
Query: 394      tattggcagaaaaggatcgtcaataatggccgtgaaagaatcttgcaa 441
                |||||||||||||||||| ||||||||||  ||||||| |||||||||
Sbjct: 21696372 tattggcagaaaaggatcatcaataatggaagtgaaagcatcttgcaa 21696325



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                                 
Query: 47       ggaatgccatatcctgaaaaggaagaagtccgtacccttctaaggcagg 95
                |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21697249 ggaatggcatatcctgaaaaggaagaagtccgtacccttctaaggcagg 21697201



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                            
Query: 484      ggtattcatcattggaccagtgaaggaagtcagaaaggcggaggctatcctgaggggccg 543
                |||||||||||||||||||||| ||||||||||||| || |||||||||||  | |||||
Sbjct: 21695352 ggtattcatcattggaccagtgcaggaagtcagaaaagctgaggctatcctccgaggccg 21695293

                                  
Query: 544      aatgctggaattttagag 561
                 |||||||| || |||||
Sbjct: 21695292 catgctggagttctagag 21695275



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                    
Query: 436      ttgcaatgttgaaatccatatcggtggtgcaaaggggcctccagatagggta 487
                ||||| ||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 21696234 ttgcagtgttgaaatccatattggtggtgcaaagggacctccagacagggta 21696183



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 614      atacagaaatgcatgtggtact 635
                ||||||||||||||||||||||
Sbjct: 21695201 atacagaaatgcatgtggtact 21695180



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 5        tacatatccttcgtgagccttcttgctgatcctcgctattgtgg 48
                |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 21698174 tacatatcttttgtcagcctccttgctgatccccgatattgtgg 21698131
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score =  274 bits (138), Expect = 4e-70
 Identities = 183/198 (92%)
 Strand = Plus / Minus

                                                                         
Query: 114   ataggcccttgtctgaaatgatgatacgagcagcaacagatgatgtgcgcttccttctca 173
             ||||||| || |||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 49060 ataggcctttatctgaaatgatgattcgagcagccacagatgatgtccgcttccttctca 49001

                                                                         
Query: 174   atatacatgagaaaatgatggagaagttaagcaaagtatcctcatggcgtctggcagtac 233
              ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |
Sbjct: 49000 gtatacatgagaaaatgatggagaagttaagcaaagtatctttatggcgtctgtcagttc 48941

                                                                         
Query: 234   gaagtgagctatactgcaggtgcttttgcataaatgacaaccagcaggcagattggccac 293
             | ||||||||||||||||||||||||||||||||||||||| || | || ||||||||||
Sbjct: 48940 gcagtgagctatactgcaggtgcttttgcataaatgacaacaagtatgcggattggccac 48881

                               
Query: 294   ctcttccaactgtccctg 311
             ||||||||||||||||||
Sbjct: 48880 ctcttccaactgtccctg 48863



 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                         
Query: 334   tgttcctgaagtggatatcctttcgctcttagatgtgcctcctggaaaaatgggacgcgt 393
             ||||||||| ||||||||||| ||  |||| |||||||||||||| |||||||| || ||
Sbjct: 48483 tgttcctgaggtggatatcctgtcagtcttggatgtgcctcctggcaaaatggggcgtgt 48424

                                                             
Query: 394   tattggcagaaaaggatcgtcaataatggccgtgaaagaatcttgcaa 441
             |||||||||||||||||| ||||||||||  ||||||| |||||||||
Sbjct: 48423 tattggcagaaaaggatcatcaataatggaagtgaaagcatcttgcaa 48376



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                              
Query: 47    ggaatgccatatcctgaaaaggaagaagtccgtacccttctaaggcagg 95
             |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49300 ggaatggcatatcctgaaaaggaagaagtccgtacccttctaaggcagg 49252



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 484   ggtattcatcattggaccagtgaaggaagtcagaaaggcggaggctatcctgaggggccg 543
             |||||||||||||||||||||| ||||||||||||| || |||||||||||  | |||||
Sbjct: 47403 ggtattcatcattggaccagtgcaggaagtcagaaaagctgaggctatcctccgaggccg 47344

                               
Query: 544   aatgctggaattttagag 561
              |||||||| || |||||
Sbjct: 47343 catgctggagttctagag 47326



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                 
Query: 436   ttgcaatgttgaaatccatatcggtggtgcaaaggggcctccagatagggta 487
             ||||| ||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 48285 ttgcagtgttgaaatccatattggtggtgcaaagggacctccagacagggta 48234



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 614   atacagaaatgcatgtggtact 635
             ||||||||||||||||||||||
Sbjct: 47252 atacagaaatgcatgtggtact 47231



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 5     tacatatccttcgtgagccttcttgctgatcctcgctattgtgg 48
             |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 50225 tacatatcttttgtcagcctccttgctgatccccgatattgtgg 50182
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>gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence
          Length = 428

 Score =  180 bits (91), Expect = 4e-42
 Identities = 160/183 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 aaaatgggacgcgttattggcagaaaaggatcgtcaataatggccgtgaaagaatcttgc 439
           ||||||||||| |||||||||||||| || ||  | |||||||  |||||||||||||||
Sbjct: 11  aaaatgggacgagttattggcagaaaggggtcaactataatggttgtgaaagaatcttgc 70

                                                                       
Query: 440 aatgttgaaatccatatcggtggtgcaaaggggcctccagatagggtattcatcattgga 499
           || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 71  aacgttgaaatccatattggtggtgctaaggggcctccagatagggttttcatcattgga 130

                                                                       
Query: 500 ccagtgaaggaagtcagaaaggcggaggctatcctgaggggccgaatgctggaattttag 559
            ||||||| |||||||| || || ||||| ||| | || |||||||||||||| || |||
Sbjct: 131 tcagtgaatgaagtcaggaaagccgaggccatcttcagaggccgaatgctggagttctag 190

              
Query: 560 aga 562
           |||
Sbjct: 191 aga 193
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>ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g03170)
           partial mRNA
          Length = 564

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 386 ggacgcgttattggcagaaaagg 408
           |||||||||||||||||||||||
Sbjct: 161 ggacgcgttattggcagaaaagg 139
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>gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 167257

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 168   ttctcaatatacatgagaaaat 189
             ||||||||||||||||||||||
Sbjct: 59235 ttctcaatatacatgagaaaat 59256
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 50       atgccatatcctgaaaaggaag 71
                ||||||||||||||||||||||
Sbjct: 13045028 atgccatatcctgaaaaggaag 13045049
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 50    atgccatatcctgaaaaggaag 71
             ||||||||||||||||||||||
Sbjct: 83829 atgccatatcctgaaaaggaag 83850
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>dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B02,
          full insert sequence
          Length = 1138

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 50 atgccatatcctgaaaaggaag 71
          ||||||||||||||||||||||
Sbjct: 51 atgccatatcctgaaaaggaag 30
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>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete
             sequences
          Length = 153078

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 610   aggaatacagaaatgcatgtgg 631
             ||||||||||||||||||||||
Sbjct: 24764 aggaatacagaaatgcatgtgg 24785
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>gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 380 aaaatgggacgcgttattggcagaa 404
           ||||||||||| |||||||||||||
Sbjct: 865 aaaatgggacgtgttattggcagaa 889
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>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186864

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    agcaggcagattggccacctc 296
              |||||||||||||||||||||
Sbjct: 135044 agcaggcagattggccacctc 135064
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>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 131209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    tccaactgtccctgatgacat 318
              |||||||||||||||||||||
Sbjct: 113138 tccaactgtccctgatgacat 113158
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>gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease domain-containing
           protein-like mRNA, complete cds
          Length = 1249

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 380 aaaatgggacgcgttattggcagaa 404
           ||||||||||| |||||||||||||
Sbjct: 843 aaaatgggacgtgttattggcagaa 867
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>ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain (DDB0191444), partial
            mRNA
          Length = 6351

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  gatgatacgagcagcaacag 152
            ||||||||||||||||||||
Sbjct: 2385 gatgatacgagcagcaacag 2366
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    atcgtcaataatggccgtga 428
              ||||||||||||||||||||
Sbjct: 939386 atcgtcaataatggccgtga 939367
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 435     cttgcaatgttgaaatccat 454
               ||||||||||||||||||||
Sbjct: 4500171 cttgcaatgttgaaatccat 4500152
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>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence
          Length = 176237

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   ttctcaatatacatgagaaaatga 191
             |||||||| |||||||||||||||
Sbjct: 27942 ttctcaatttacatgagaaaatga 27965
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>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence
          Length = 229184

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 168    ttctcaatatacatgagaaaatga 191
              |||||||| |||||||||||||||
Sbjct: 186047 ttctcaatttacatgagaaaatga 186070
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>ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  atgagaaaatgatggagaag 199
            ||||||||||||||||||||
Sbjct: 1886 atgagaaaatgatggagaag 1905
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>emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in linkage group 14,
              complete sequence
          Length = 182719

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 119705 ttttagagaaaggacttttg 119686
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>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
            complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 554  ttttagagaaaggacttttg 573
            ||||||||||||||||||||
Sbjct: 1983 ttttagagaaaggacttttg 1964
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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    gatggagaagttaagcaaag 209
              ||||||||||||||||||||
Sbjct: 117715 gatggagaagttaagcaaag 117696
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>emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in linkage group 3,
             complete sequence
          Length = 111124

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   aaatccatatcggtggtgca 466
             ||||||||||||||||||||
Sbjct: 15712 aaatccatatcggtggtgca 15731
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    tgctggaattttagagaaag 565
              ||||||||||||||||||||
Sbjct: 112294 tgctggaattttagagaaag 112313
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>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG
              island, complete sequence
          Length = 170970

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 602    tgaacacaaggaatacagaaatgcatgt 629
              |||||||| |||||||||||||| ||||
Sbjct: 139716 tgaacacagggaatacagaaatgaatgt 139743
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>emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119I23 on chromosome 10, complete
             sequence
          Length = 98818

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   gaaagaatcttgcaatgttg 446
             ||||||||||||||||||||
Sbjct: 23487 gaaagaatcttgcaatgttg 23506
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    atgagaaaatgatggagaag 199
              ||||||||||||||||||||
Sbjct: 562589 atgagaaaatgatggagaag 562570
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>emb|AL161982.1|HSM802585 Homo sapiens genomic DNA; cDNA DKFZp761J1224 (from clone
            DKFZp761J1224)
          Length = 5412

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 427  gaaagaatcttgcaatgttg 446
            ||||||||||||||||||||
Sbjct: 2029 gaaagaatcttgcaatgttg 2048
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>emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in linkage group 5,
             complete sequence
          Length = 19924

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   ttttagagaaaggacttttg 573
             ||||||||||||||||||||
Sbjct: 19907 ttttagagaaaggacttttg 19888
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>emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in linkage group 18,
              complete sequence
          Length = 164140

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 136776 ttttagagaaaggacttttg 136757
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>emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, complete sequence
          Length = 160830

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   ttttagagaaaggacttttg 573
             ||||||||||||||||||||
Sbjct: 17799 ttttagagaaaggacttttg 17818
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>ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC555615 (LOC555615),
           mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 176 atacatgagaaaatgatggagaag 199
           |||||||||| |||||||||||||
Sbjct: 772 atacatgagacaatgatggagaag 795
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>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete
             sequence
          Length = 157571

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   ttttagagaaaggacttttg 573
             ||||||||||||||||||||
Sbjct: 90116 ttttagagaaaggacttttg 90135
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>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 554  ttttagagaaaggacttttg 573
            ||||||||||||||||||||
Sbjct: 9478 ttttagagaaaggacttttg 9459
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>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17,
              complete sequence
          Length = 247607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 151527 ttttagagaaaggacttttg 151546
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>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 182403 ttttagagaaaggacttttg 182384
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>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete
             sequence
          Length = 192031

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   gccacctcttccaactgtcc 308
             ||||||||||||||||||||
Sbjct: 53864 gccacctcttccaactgtcc 53883
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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 596   atcttttgaacacaaggaat 615
             ||||||||||||||||||||
Sbjct: 60025 atcttttgaacacaaggaat 60006
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>ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 43  ttgtggaatgccatatcctgaaaa 66
           |||||||||| |||||||||||||
Sbjct: 435 ttgtggaatggcatatcctgaaaa 412
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>emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in linkage group 14, complete
              sequence
          Length = 265520

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 103136 ttttagagaaaggacttttg 103155
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>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence
          Length = 136822

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    ctgatgacattgaagctgaa 328
              ||||||||||||||||||||
Sbjct: 133815 ctgatgacattgaagctgaa 133796
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>emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 in linkage group 18,
              complete sequence
          Length = 131062

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 117405 ttttagagaaaggacttttg 117386
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>emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 in linkage group 1,
             complete sequence
          Length = 176961

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 176   atacatgagaaaatgatggagaag 199
             |||||||||| |||||||||||||
Sbjct: 83311 atacatgagacaatgatggagaag 83334
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>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4,
             complete sequence
          Length = 125275

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   ttttagagaaaggacttttg 573
             ||||||||||||||||||||
Sbjct: 21717 ttttagagaaaggacttttg 21736
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>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence
          Length = 298406

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     ttgtggaatgccatatcctgaaaa 66
              |||||||||| |||||||||||||
Sbjct: 251813 ttgtggaatggcatatcctgaaaa 251790
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>emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in linkage group 4, complete
              sequence
          Length = 263674

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttttagagaaaggacttttg 573
              ||||||||||||||||||||
Sbjct: 154236 ttttagagaaaggacttttg 154217
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>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14,
             complete sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   ttttagagaaaggacttttg 573
             ||||||||||||||||||||
Sbjct: 14323 ttttagagaaaggacttttg 14342
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>gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining protein (Sry) gene, partial
           cds
          Length = 153

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgtgcctcctggaaaaatgg 386
           ||||||||||||||||||||
Sbjct: 140 tgtgcctcctggaaaaatgg 121
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>gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, complete cds
          Length = 6681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  gatgatacgagcagcaacag 152
            ||||||||||||||||||||
Sbjct: 2454 gatgatacgagcagcaacag 2435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,408,575
Number of Sequences: 3902068
Number of extensions: 6408575
Number of successful extensions: 120941
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120691
Number of HSP's gapped (non-prelim): 250
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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