ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12f22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104570.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G06, full insert sequence Length = 1096 Score = 303 bits (153), Expect = 3e-79 Identities = 426/517 (82%) Strand = Plus / Plus Query: 48 ctgtacctgaacaaggcggaggctcgggacaagatctgcagggccatccagtacggctcc 107 |||||| ||||||| || ||||| |||||||||| |||||||| ||||| |||||||| Sbjct: 180 ctgtacttgaacaaagccgaggccagggacaagatatgcagggcgatccaatacggctcg 239 Query: 108 aagttcatcagcaacggccagccaggcaccgcgcagaacgtcgacaagtccaccaccttg 167 ||||| ||||| ||||| ||||| ||||| || ||| | ||||||| |||||||||| | Sbjct: 240 aagtttatcagtaacgggcagcctggcacggcacaggatgtcgacaggtccaccaccctt 299 Query: 168 gctcgcaaggtcttcaggctcctaaagtgggtgaacgatcttcatgctctcatcagccca 227 |||||||| || ||| |||| || |||||||| || ||||| |||| ||| |||||||| Sbjct: 300 gctcgcaaagttttccggcttctcaagtgggtcaatgatctgcatggtcttatcagccct 359 Query: 228 gccgccaaaggcacccctctcacactggtcctgcttgggaagtccaagaatgctctgctg 287 | || || || || ||||| ||||||||| |||||||||||||||| ||||| ||||| Sbjct: 360 cctgctaaggggactcctcttacactggtcttgcttgggaagtccaaaaatgcgctgctc 419 Query: 288 tcgaccttcttgttcctggaccagttcgtgtggctagggagatcggggatttaccagaac 347 ||||| ||||||||||||||||| || || ||| | || ||| | ||||| ||| ||||| Sbjct: 420 tcgactttcttgttcctggaccaatttgtatggttgggaagaacagggatatacaagaac 479 Query: 348 aaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcctccgtc 407 ||||||||||| ||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 480 aaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctcttcagtc 539 Query: 408 tgtgcaagcctagttgagcttggtgagctcaagaggctatccaaggcgatgaggaagcgc 467 |||||| | |||||||||||||| ||||| ||||||||||| || | |||||||||| Sbjct: 540 tgtgcagggctagttgagcttggagagcttaagaggctatcaaaatcaatgaggaagctg 599 Query: 468 gccaaggagctcaggggcgccgacaaatacgaggacgagcagtacctggggaagatgaag 527 || | ||||| |||| | |||||||| ||| | || |||||| | | |||||||| Sbjct: 600 gcgagagagctgagggatactgacaaatatgagaatgaccagtacaagagcaagatgaaa 659 Query: 528 cagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| || |||||||| || ||||||||||||| Sbjct: 660 cagtcggatgaacggctgctagcactggtgaaggcgg 696
>dbj|AK104706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D09, full insert sequence Length = 1003 Score = 303 bits (153), Expect = 3e-79 Identities = 426/517 (82%) Strand = Plus / Plus Query: 48 ctgtacctgaacaaggcggaggctcgggacaagatctgcagggccatccagtacggctcc 107 |||||| ||||||| || ||||| |||||||||| |||||||| ||||| |||||||| Sbjct: 83 ctgtacttgaacaaagccgaggccagggacaagatatgcagggcgatccaatacggctcg 142 Query: 108 aagttcatcagcaacggccagccaggcaccgcgcagaacgtcgacaagtccaccaccttg 167 ||||| ||||| ||||| ||||| ||||| || ||| | ||||||| |||||||||| | Sbjct: 143 aagtttatcagtaacgggcagcctggcacggcacaggatgtcgacaggtccaccaccctt 202 Query: 168 gctcgcaaggtcttcaggctcctaaagtgggtgaacgatcttcatgctctcatcagccca 227 |||||||| || ||| |||| || |||||||| || ||||| |||| ||| |||||||| Sbjct: 203 gctcgcaaagttttccggcttctcaagtgggtcaatgatctgcatggtcttatcagccct 262 Query: 228 gccgccaaaggcacccctctcacactggtcctgcttgggaagtccaagaatgctctgctg 287 | || || || || ||||| ||||||||| |||||||||||||||| ||||| ||||| Sbjct: 263 cctgctaaggggactcctcttacactggtcttgcttgggaagtccaaaaatgcgctgctc 322 Query: 288 tcgaccttcttgttcctggaccagttcgtgtggctagggagatcggggatttaccagaac 347 ||||| ||||||||||||||||| || || ||| | || ||| | ||||| ||| ||||| Sbjct: 323 tcgactttcttgttcctggaccaatttgtatggttgggaagaacagggatatacaagaac 382 Query: 348 aaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcctccgtc 407 ||||||||||| ||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 383 aaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctcttcagtc 442 Query: 408 tgtgcaagcctagttgagcttggtgagctcaagaggctatccaaggcgatgaggaagcgc 467 |||||| | |||||||||||||| ||||| ||||||||||| || | |||||||||| Sbjct: 443 tgtgcagggctagttgagcttggagagcttaagaggctatcaaaatcaatgaggaagctg 502 Query: 468 gccaaggagctcaggggcgccgacaaatacgaggacgagcagtacctggggaagatgaag 527 || | ||||| |||| | |||||||| ||| | || |||||| | | |||||||| Sbjct: 503 gcgagagagctgagggatactgacaaatatgagaatgaccagtacaagagcaagatgaaa 562 Query: 528 cagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| || |||||||| || ||||||||||||| Sbjct: 563 cagtcggatgaacggctgctagcactggtgaaggcgg 599
>dbj|AK070213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I05, full insert sequence Length = 1188 Score = 295 bits (149), Expect = 8e-77 Identities = 425/517 (82%) Strand = Plus / Plus Query: 48 ctgtacctgaacaaggcggaggctcgggacaagatctgcagggccatccagtacggctcc 107 |||||| ||||||| || ||||| |||||||||| |||||||| ||||| |||||||| Sbjct: 175 ctgtacttgaacaaagccgaggccagggacaagatatgcagggcgatccaatacggctcg 234 Query: 108 aagttcatcagcaacggccagccaggcaccgcgcagaacgtcgacaagtccaccaccttg 167 ||||| ||||| ||||| ||||| ||||| || ||| | ||||||| |||||||||| | Sbjct: 235 aagtttatcagtaacgggcagcctggcacggcacaggatgtcgacaggtccaccaccctt 294 Query: 168 gctcgcaaggtcttcaggctcctaaagtgggtgaacgatcttcatgctctcatcagccca 227 |||||||| || ||| |||| || |||||||| || ||||| |||| ||| |||||||| Sbjct: 295 gctcgcaaagttttccggcttctcaagtgggtcaatgatctgcatggtcttatcagccct 354 Query: 228 gccgccaaaggcacccctctcacactggtcctgcttgggaagtccaagaatgctctgctg 287 | || || || || ||||| ||||||||| |||||| ||||||||| ||||| ||||| Sbjct: 355 cctgctaaggggactcctcttacactggtcttgcttgagaagtccaaaaatgcgctgctc 414 Query: 288 tcgaccttcttgttcctggaccagttcgtgtggctagggagatcggggatttaccagaac 347 ||||| ||||||||||||||||| || || ||| | || ||| | ||||| ||| ||||| Sbjct: 415 tcgactttcttgttcctggaccaatttgtatggttgggaagaacagggatatacaagaac 474 Query: 348 aaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcctccgtc 407 ||||||||||| ||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 475 aaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctcttcagtc 534 Query: 408 tgtgcaagcctagttgagcttggtgagctcaagaggctatccaaggcgatgaggaagcgc 467 |||||| | |||||||||||||| ||||| ||||||||||| || | |||||||||| Sbjct: 535 tgtgcagggctagttgagcttggagagcttaagaggctatcaaaatcaatgaggaagctg 594 Query: 468 gccaaggagctcaggggcgccgacaaatacgaggacgagcagtacctggggaagatgaag 527 || | ||||| |||| | |||||||| ||| | || |||||| | | |||||||| Sbjct: 595 gcgagagagctgagggatactgacaaatatgagaatgaccagtacaagagcaagatgaaa 654 Query: 528 cagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| || |||||||| || ||||||||||||| Sbjct: 655 cagtcggatgaacggctgctagcactggtgaaggcgg 691
>gb|AY111308.1| Zea mays CL5730_1 mRNA sequence Length = 1158 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 48 ctgtacctgaacaaggcggaggctcgggacaagatctgcagggccatccagtacggctcc 107 ||||||||||||||||| ||||| ||||||||||||||| | || ||||||||||| ||| Sbjct: 169 ctgtacctgaacaaggccgaggcgcgggacaagatctgccgagcgatccagtacgggtcc 228 Query: 108 aagttcatcagcaacggccagccaggcaccgcgcagaacgtcgacaagtccacca 162 |||||||||||||||||| ||||||| | ||||||||||||||||||||||||| Sbjct: 229 aagttcatcagcaacggcgagccagggcctgcgcagaacgtcgacaagtccacca 283 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 264 gggaagtccaagaatgctctgctgtcgaccttcttgttcctggaccagttcgtgtgg 320 |||||||||||||| || |||||||||| ||| | |||||||||||| |||||||| Sbjct: 385 gggaagtccaagaacgcgatgctgtcgactttcctcttcctggaccagatcgtgtgg 441
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 343 agaacaaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcct 402 |||||||||||||||| ||||| || | ||||||||||||||||||||||||||||| | Sbjct: 93938 agaacaaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctctt 93879 Query: 403 ccgtctgtgcaagcctagttgag 425 | ||||||||| | ||||||||| Sbjct: 93878 cagtctgtgcagggctagttgag 93856 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 268 agtccaagaatgctctgctgtcgaccttcttgttcctggacca 310 ||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 94147 agtccaaaaatgcgctgctctcgactttcttgttcctggacca 94105 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 519 aagatgaagcagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| |||||||| || |||||||| || ||||||||||||| Sbjct: 93558 aagatgaaacagtcggatgaacggctgctagcactggtgaaggcgg 93513 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 193 agtgggtgaacgatcttcatgctctcatcagcccagccgccaaaggcacccctctcacac 252 ||||||| || ||||| |||| ||| |||||||| | || || || || ||||| |||| Sbjct: 94310 agtgggtcaatgatctgcatggtcttatcagccctcctgctaaggggactcctcttacac 94251 Query: 253 tggtcctgcttgggaag 269 ||||| ||||||||||| Sbjct: 94250 tggtcttgcttgggaag 94234
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 343 agaacaaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcct 402 |||||||||||||||| ||||| || | ||||||||||||||||||||||||||||| | Sbjct: 938741 agaacaaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctctt 938682 Query: 403 ccgtctgtgcaagcctagttgag 425 | ||||||||| | ||||||||| Sbjct: 938681 cagtctgtgcagggctagttgag 938659 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 268 agtccaagaatgctctgctgtcgaccttcttgttcctggacca 310 ||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 938950 agtccaaaaatgcgctgctctcgactttcttgttcctggacca 938908 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 519 aagatgaagcagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| |||||||| || |||||||| || ||||||||||||| Sbjct: 938361 aagatgaaacagtcggatgaacggctgctagcactggtgaaggcgg 938316 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 193 agtgggtgaacgatcttcatgctctcatcagcccagccgccaaaggcacccctctcacac 252 ||||||| || ||||| |||| ||| |||||||| | || || || || ||||| |||| Sbjct: 939113 agtgggtcaatgatctgcatggtcttatcagccctcctgctaaggggactcctcttacac 939054 Query: 253 tggtcctgcttgggaag 269 ||||| ||||||||||| Sbjct: 939053 tggtcttgcttgggaag 939037
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 343 agaacaaggagcgcacggaccgcatcgccaggatatccctctactgctggatggcctcct 402 |||||||||||||||| ||||| || | ||||||||||||||||||||||||||||| | Sbjct: 938739 agaacaaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctctt 938680 Query: 403 ccgtctgtgcaagcctagttgag 425 | ||||||||| | ||||||||| Sbjct: 938679 cagtctgtgcagggctagttgag 938657 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 268 agtccaagaatgctctgctgtcgaccttcttgttcctggacca 310 ||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 938948 agtccaaaaatgcgctgctctcgactttcttgttcctggacca 938906 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 519 aagatgaagcagtcggacgaccggctgctggcgctggtgaaggcgg 564 |||||||| |||||||| || |||||||| || ||||||||||||| Sbjct: 938359 aagatgaaacagtcggatgaacggctgctagcactggtgaaggcgg 938314 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 193 agtgggtgaacgatcttcatgctctcatcagcccagccgccaaaggcacccctctcacac 252 ||||||| || ||||| |||| ||| |||||||| | || || || || ||||| |||| Sbjct: 939111 agtgggtcaatgatctgcatggtcttatcagccctcctgctaaggggactcctcttacac 939052 Query: 253 tggtcctgcttgggaag 269 ||||| ||||||||||| Sbjct: 939051 tggtcttgcttgggaag 939035
>emb|AJ537595.1|UNK537595 Uncultured bacterium cel gene for cellulase, from Lake Sonachi Length = 3410 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 13 tggaggcgacgagggcggagctg 35 ||||||||||||||||||||||| Sbjct: 2911 tggaggcgacgagggcggagctg 2933
>gb|AY596614.1| Saccharum officinarum clone SCCCRZ2001B03, complete sequence Length = 1223 Score = 44.1 bits (22), Expect = 0.49 Identities = 202/262 (77%) Strand = Plus / Minus Query: 49 tgtacctgaacaaggcggaggctcgggacaagatctgcagggccatccagtacggctcca 108 ||||||| |||||||| ||||| |||| || |||||||| || || ||||| || || | Sbjct: 1024 tgtacctaaacaaggcagaggcaagggataaaatctgcagagcgatacagtatggatcaa 965 Query: 109 agttcatcagcaacggccagccaggcaccgcgcagaacgtcgacaagtccaccaccttgg 168 ||||| | ||||| || | ||||| | || ||||||||||||||||| || | || | Sbjct: 964 agttcctgagcaatggagaaccagggcctgcacagaacgtcgacaagtcaactagtttag 905 Query: 169 ctcgcaaggtcttcaggctcctaaagtgggtgaacgatcttcatgctctcatcagcccag 228 |||| || || ||| |||| | |||| || ||||| ||||||||| | ||||| || Sbjct: 904 ctcggaaagttttccggctttttaagtttgtcaacgaccttcatgctttaatcagtcctc 845 Query: 229 ccgccaaaggcacccctctcacactggtcctgcttgggaagtccaagaatgctctgctgt 288 |||||||||| || || || ||||| || | || || ||||| |||||||| |||||| Sbjct: 844 ccgccaaaggaactccacttccactgatcttactcggaaagtcgaagaatgcaatgctgt 785 Query: 289 cgaccttcttgttcctggacca 310 | || ||| | ||||||||||| Sbjct: 784 caactttccttttcctggacca 763
>gb|AF542002.1| Griffithsia japonica signal recognition particle receptor-like protein L36 mRNA, partial cds Length = 595 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 536 cgaccggctgctggcgctggtg 557 |||||||||||||||||||||| Sbjct: 269 cgaccggctgctggcgctggtg 290
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 gttggaggcgacgagggcggag 32 |||||||||||||||||||||| Sbjct: 39305 gttggaggcgacgagggcggag 39326
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 532 cggacgaccggctgctggcgctggtgaaggcgg 564 ||||||| ||| |||||||| |||||||||||| Sbjct: 3674981 cggacgagcgggtgctggcgatggtgaaggcgg 3675013
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 acctggggaagatgaagcagt 531 ||||||||||||||||||||| Sbjct: 111696 acctggggaagatgaagcagt 111716
>gb|AC107220.4| Homo sapiens BAC clone RP11-586L23 from 4, complete sequence Length = 67392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 acccctctcacactggtcctg 260 ||||||||||||||||||||| Sbjct: 60219 acccctctcacactggtcctg 60239
>gb|AC138005.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038O16, complete sequence Length = 37350 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 10409 gcgccaaggtgctcaggggcgccg 10386
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 107793 gcgccaaggtgctcaggggcgccg 107770
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ggcgatgaggaagcgcgcca 471 |||||||||||||||||||| Sbjct: 55337 ggcgatgaggaagcgcgcca 55318
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 cgaccggctgctggcgctggtgaaggcg 563 ||||||||||||| ||||||| |||||| Sbjct: 378951 cgaccggctgctgacgctggtcaaggcg 378978
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 9099219 gcgccaaggtgctcaggggcgccg 9099196
>gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, complete cds Length = 198051 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gctcgggacaagatctgcagggcc 92 ||||||| |||||||||||||||| Sbjct: 164062 gctcggggcaagatctgcagggcc 164085
>gb|AY192979.1| Macaca mulatta OR1J2-like gene, partial sequence Length = 845 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggtgctgtacctgaacaagg 63 |||||||||||||||||||| Sbjct: 58 ggtgctgtacctgaacaagg 77
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 cgaccggctgctggcgctgg 555 |||||||||||||||||||| Sbjct: 979859 cgaccggctgctggcgctgg 979878
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cgaccggctgctggcgctgg 555 |||||||||||||||||||| Sbjct: 1387716 cgaccggctgctggcgctgg 1387697
>dbj|BS000179.1| Pan troglodytes chromosome 22 clone:RP43-082J09, map 22, complete sequences Length = 184352 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cactggtcctgcttgggaag 269 |||||||||||||||||||| Sbjct: 80950 cactggtcctgcttgggaag 80931
>dbj|AK100126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008I20, full insert sequence Length = 3229 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 589 gcgccaaggtgctcaggggcgccg 612
>dbj|AK069552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N03, full insert sequence Length = 3226 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 581 gcgccaaggtgctcaggggcgccg 604
>gb|BT023969.1| Zea mays clone EL01N0404F02 mRNA sequence Length = 1382 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gaacgtcgacaagtccacca 162 |||||||||||||||||||| Sbjct: 1174 gaacgtcgacaagtccacca 1155
>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cactggtcctgcttgggaag 269 |||||||||||||||||||| Sbjct: 46321 cactggtcctgcttgggaag 46302
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 gcgccaaggagctcaggggcgccg 489 ||||||||| |||||||||||||| Sbjct: 9170916 gcgccaaggtgctcaggggcgccg 9170893
>gb|AC022726.13| Homo sapiens chromosome 18, clone RP11-299P2, complete sequence Length = 146688 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gctcgggacaagatctgcagggcc 92 ||||||| |||||||||||||||| Sbjct: 100162 gctcggggcaagatctgcagggcc 100185
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 cgaccggctgctggcgctgg 555 |||||||||||||||||||| Sbjct: 2169722 cgaccggctgctggcgctgg 2169741
>dbj|AP000567.2| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B41N19, SOD-AML region, complete sequence Length = 181283 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cactggtcctgcttgggaag 269 |||||||||||||||||||| Sbjct: 6552 cactggtcctgcttgggaag 6533 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,102,948 Number of Sequences: 3902068 Number of extensions: 4102948 Number of successful extensions: 86005 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85518 Number of HSP's gapped (non-prelim): 488 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
