| Clone Name | basd12e23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SEC23_YEAST (P15303) Protein transport protein SEC23 | 30 | 4.3 | 2 | WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... | 30 | 7.3 | 3 | SCRR_STAXY (P74892) Sucrose operon repressor (Scr operon regulat... | 29 | 9.6 |
|---|
>SEC23_YEAST (P15303) Protein transport protein SEC23| Length = 768 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 325 PEFMELFVKRAPTQVVDAMRHTVTNMIGTLPP-QFFAVTVTTVAENLAQLMYSVL 486 P++ L + P ++ +TN T+PP FF V +T+ ENL L S++ Sbjct: 91 PQYTNLSQENMPLELQSTTIEYITNKPVTVPPIFFFVVDLTSETENLDSLKESII 145
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 322 QPEFMELFVKRAPTQVVDAMRHTVTNMIGTLPPQ 423 QP + F + APT V + HTV NM T PPQ Sbjct: 909 QPVYPAAFPQMAPTDVPPSPHHTVQNMRAT-PPQ 941
>SCRR_STAXY (P74892) Sucrose operon repressor (Scr operon regulatory protein)| Length = 320 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 358 PTQVVDAMRHTVTNMIGTLPPQF--FAV--TVTTVAENLAQLMYSVLMTGYMFRNAQYRL 525 P Q ++R TNMIG + P+ FAV T+ V QL YS+L+ + N +L Sbjct: 46 PNQFAQSLRARRTNMIGAIIPRMNSFAVDETIKGVKTVCDQLNYSLLLN---YTNLNIQL 102 Query: 526 EL 531 E+ Sbjct: 103 EI 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,812,476 Number of Sequences: 219361 Number of extensions: 1284967 Number of successful extensions: 4147 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3942 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4137 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)