ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12e10 |
|---|---|
| Clone Library Name | barley_pub |
>ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Tyrosine| kinase non-receptor protein 2) Length = 1036 Score = 37.4 bits (85), Expect = 0.041 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 3/111 (2%) Frame = +3 Query: 204 AGQVLKLFRALEQSVV---ESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPET 374 + Q ++F+AL+Q + ++PG SPS +P+ P P+ P Sbjct: 700 SAQTAEIFQALQQECMRQLQAPGSPAPSPSPGGDDKPQVPPRVPIP-----------PRP 748 Query: 375 TRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGS 527 TR +L P T+ W PP E +P +PS PGS Sbjct: 749 TRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGS 799
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 28.5 bits (62), Expect(2) = 0.11 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAP 521 PPPR + +PAP +P RP P Sbjct: 239 PPPRPAPPRPAPPGQAAPQRPPPP 262 Score = 26.2 bits (56), Expect(2) = 0.11 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 Query: 587 KPSKPAPPVHVDPSQAVCQQPHV 655 KP+KP PP + ++ +QPHV Sbjct: 288 KPAKPPPPKSKEDILSLFEQPHV 310
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 35.8 bits (81), Expect = 0.12 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Frame = +3 Query: 255 SPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTT-- 428 +P L+ + T + P P+SP R PET E++ +RRT Sbjct: 522 APALASAATKERTESEVPPRPASPKVT-------RSPPETAAPVEDM------ARRTKRP 568 Query: 429 AWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGS 527 A PPP+ SG + +P AP P G+PG+ Sbjct: 569 APARPTMPPPQVSGSRSSPPAPPLPPGSGSPGT 601
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 35.0 bits (79), Expect = 0.21 Identities = 30/98 (30%), Positives = 39/98 (39%) Frame = +3 Query: 243 SVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRR 422 SV P ++RRS S SG P S L R L C E+ L P S Sbjct: 2275 SVSSKPPINRRSSGSIPSGSPSDMTSRSLRR-----SLSSCSESQSEASSLLPQMTKSPS 2329 Query: 423 TTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVA 536 + S + PP +S + P+P S G P S V+ Sbjct: 2330 SMTLTVSRQNPPDTSNKGPSPDPKKSLVPVGIPTSTVS 2367
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 34.7 bits (78), Expect = 0.27 Identities = 25/101 (24%), Positives = 35/101 (34%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWR 437 P S R + T G PRPGP +P P + P + +T Sbjct: 65 PAASARPGAKPTPGGPRPGPRTP------------APAAS-------APQAPAEQTARPT 105 Query: 438 HSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVG 560 + P G P P P +P P A + A ++P G Sbjct: 106 DARPGPAVKPGPAPTPARPAAPEAPAAKAAPEAPAQRPTPG 146
>ACK1_MOUSE (O54967) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Non-receptor| protein tyrosine kinase Ack) (Tyrosine kinase non-receptor protein 2) Length = 1055 Score = 34.7 bits (78), Expect = 0.27 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 4/110 (3%) Frame = +3 Query: 210 QVLKLFRALEQSVVESPGLSRRSPSSATSGQPRPG----PSSPLARFLWCSRLRVCPETT 377 Q ++F+AL+Q + + P+ + P PG P P R+ + P T Sbjct: 717 QTAEIFQALQQECMRQ----LQVPTGQLTPSPTPGGDDKPQVP-------PRVPIPPRPT 765 Query: 378 RCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGS 527 R R EL P T+ W PP E +P +PS PGS Sbjct: 766 RPRVELSPAPSGEEETSRWPGPASPPRVPPREPLSPQGSRTPSPLVPPGS 815
>IF2_ANASP (Q8YQJ1) Translation initiation factor IF-2| Length = 1039 Score = 34.3 bits (77), Expect = 0.35 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Frame = +3 Query: 228 RALEQSVVESPGLSRRS-------PSSATSG-QPRPGPSSPLARFLWCSRLRVCPETTRC 383 RA + + + G S++ P+SA +G + RP P + L + ++ TT Sbjct: 49 RAAAEKLAATNGTSKKELNATSHKPNSAPAGSRNRPAPPQKQQQILEIRKPKILRNTTSN 108 Query: 384 REEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRP 512 E SV++ + + + PPR +P PT+PSRP Sbjct: 109 APEA---SVANNQIASSEANSPAPPRPFATPVSPMKPTAPSRP 148
>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 582 Score = 33.9 bits (76), Expect = 0.46 Identities = 28/97 (28%), Positives = 39/97 (40%) Frame = +3 Query: 234 LEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVS 413 +E+ +E+P L P+ P P P PLA + + + P T + L PP Sbjct: 55 VEEPRMEAPPLPLSPPA------PPPAPPPPLATPAPLTVIPI-PVVTNSPQPLPPP--- 104 Query: 414 SRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPG 524 PP + QP P AP P+ GAPG Sbjct: 105 -------------PPLPAAAQPLPLAPRQPALVGAPG 128
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 33.9 bits (76), Expect = 0.46 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +3 Query: 447 EPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNS 575 +P PR + PAP AP + P AP + A+ P G RP + Sbjct: 115 KPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRPGARPGA 157
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 33.9 bits (76), Expect = 0.46 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 14/101 (13%) Frame = +3 Query: 261 GLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVS--SRRTTAW 434 G +R++PS ++S PRP PL P +R ++ PP R + Sbjct: 226 GSARQNPSGSSSPFPRP----PLP-----------PTPSRALDDKPPPPPPPVGNRPSMH 270 Query: 435 RHSWEPPPRSSGEQP------------APCAPTSPSRPGAP 521 R + PPP + + P AP P PSRPG P Sbjct: 271 REAVPPPPSQTSKPPVPSTPRPGLGSQAPPPPPPPSRPGPP 311
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 33.9 bits (76), Expect = 0.46 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWR 437 P LS+ + A S QP PG PL + P TT + E P+ + ++A Sbjct: 635 PPLSQGPATQAPSAQPTPG--EPL----------LAPPTTELKPESSNPNNPNPSSSAGS 682 Query: 438 HSWEPPPRSSGEQ--PAPCAPTSPSRPGAPGS 527 + PPP+SS PAP PT S P S Sbjct: 683 N---PPPKSSSSDNPPAPNKPTPTSSSTTPPS 711
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 26.9 bits (58), Expect(2) = 0.56 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGS 527 PP G P P P PGAPG+ Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGN 130 Score = 25.4 bits (54), Expect(2) = 0.56 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +1 Query: 565 APTPSGFEAEQASAPCTCRSEPSCLSAAPCDGARCG 672 AP G + ASAPC ++P C PC G G Sbjct: 124 APGAPGNPGKGASAPCEPVTQPPC---QPCPGGPPG 156
>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor| with BRCT domains 1) Length = 2089 Score = 33.5 bits (75), Expect = 0.60 Identities = 34/112 (30%), Positives = 46/112 (41%) Frame = +3 Query: 267 SRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSW 446 SR +P ATS P P PS+ A+ P T + P S ++R T Sbjct: 1113 SRMTPFPATSAAPEPHPSTSTAQ----------PVTPK------PTSQATRSRT------ 1150 Query: 447 EPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQ 602 RSS + P P PT+P + S +QPV P S+ R R S+ Sbjct: 1151 ---NRSSVKTPEPVVPTAPELQPS-----TSTDQPVTS-EPTSQVTRGRKSR 1193
>FZD5_HUMAN (Q13467) Frizzled 5 precursor (Frizzled-5) (Fz-5) (hFz5) (FzE5)| Length = 585 Score = 33.5 bits (75), Expect = 0.60 Identities = 42/162 (25%), Positives = 54/162 (33%), Gaps = 14/162 (8%) Frame = +3 Query: 183 WKALRAEAGQVLKLFRALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLAR---FLWCSR 353 W + + L+ F + + P + P + + SPL R F W R Sbjct: 71 WPLVEIQCSPDLRFFLCTMYTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPER 130 Query: 354 LRV--CPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAP-- 521 + P R E L S TTA PPR P P PT P PGAP Sbjct: 131 MSCDRLPVLGRDAEVLCMDYNRSEATTA-------PPR-----PFPAKPTLPGPPGAPAS 178 Query: 522 -------GSFVASMEQPVVGLRPNSEWIRSRASQRPLYMSIR 626 G FV +P V + S PLY +R Sbjct: 179 GGECPAGGPFVCKCREPFVPILKES---------HPLYNKVR 211
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1 (Ser/Arg-related| nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 33.1 bits (74), Expect = 0.78 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 3/108 (2%) Frame = +3 Query: 255 SPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAW 434 SP RR SS+ + P PS+ R R+ PE + ++ P S RR ++ Sbjct: 696 SPPPVRRGASSSPQRRQSPSPSTRPIR-----RVSRTPEPKKIKKAASPSPQSVRRVSSS 750 Query: 435 RH---SWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRP 569 R S EP + P+P SPS +P V + P P Sbjct: 751 RSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 798
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 33.1 bits (74), Expect = 0.78 Identities = 24/75 (32%), Positives = 34/75 (45%) Frame = +3 Query: 303 PRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPA 482 PRP P+ + W +R CP T R RR+ A R PP +G++P+ Sbjct: 138 PRPHPAFQVQ---WSARNPGCPRTWR------------RRSGAQRGH---PPPGAGQRPS 179 Query: 483 PCAPTSPSRPGAPGS 527 P+ PGAPG+ Sbjct: 180 GPTGGRPAAPGAPGT 194
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 32.7 bits (73), Expect = 1.0 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Frame = +3 Query: 249 VESPGLSRRSPSSATSGQPRPGPS--SPLARFLWCSRLRVCPETTRCREEL*PPSVSSRR 422 V S G+ + + + S PG + +PL + CP T+ PP S Sbjct: 807 VNSVGMGQPAAQAGVSQGQEPGAALPNPLNMLAPQASQLPCPPVTQSPLHPTPPPAS--- 863 Query: 423 TTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPG 524 T A S + P P P APT PS P + G Sbjct: 864 TAAGMPSLQHPTAPGMTPPQPAAPTQPSTPVSSG 897
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 32.7 bits (73), Expect = 1.0 Identities = 25/87 (28%), Positives = 33/87 (37%) Frame = +3 Query: 303 PRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPA 482 P P +S +A + + CP+ R P V + R PPP + + Sbjct: 719 PPPQVTSAIATLQQAAAMSFCPQVAR-------PLVGPLALGSPRLVRRPPPGPAPAAAS 771 Query: 483 PCAPTSPSRPGAPGSFVASMEQPVVGL 563 P P S PGAP S A P GL Sbjct: 772 PGPPPPASPPGAPASPRAPRTSPYGGL 798
>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6| Length = 612 Score = 32.7 bits (73), Expect = 1.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -1 Query: 550 GCSIEATNEPGAPGLEGEVGAQGAGCSPEERGGGS 446 G IE EPGA LEG ++GA +P + G G+ Sbjct: 20 GAVIEGPGEPGAADLEGREASEGAAEAPRDLGEGA 54
>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 591 Score = 32.7 bits (73), Expect = 1.0 Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 2/119 (1%) Frame = +3 Query: 204 AGQVLKLFRAL--EQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETT 377 A + +L AL E+ +E+P L P+ P P P PLA + + + P T Sbjct: 45 ASNLARLAHALPVEEPRIEAPPLPLSPPA------PPPAPPPPLATPAPLTVIPI-PVVT 97 Query: 378 RCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPV 554 + L PP PP QP P AP P+ PG S+++PV Sbjct: 98 NSPQSLPPP----------------PPLPPAAQPLPLAPRQPALVSTPG---LSIKEPV 137
>DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1) Length = 663 Score = 32.3 bits (72), Expect = 1.3 Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Frame = +3 Query: 252 ESPGLSRR-SPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTT 428 E+P L + SPS T G P P P SP + C R R PP+ S R+ Sbjct: 420 EAPKLCKLDSPSGGTLGLPSPSPDSP-------DSVPECRPRPRRRR---PPASSPARSP 469 Query: 429 A-------WRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQP 551 A + + P AP P P +P PG +V ++ P Sbjct: 470 AHGLGLNFGDTARQTPRHGLSALSAPGLP-GPGQPAGPGGWVPPLDSP 516
>GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] (Fragment) Length = 414 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/66 (33%), Positives = 29/66 (43%) Frame = +3 Query: 309 PGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPC 488 P PS+PL L+ V P+T + + PP SS EPPP G P P Sbjct: 190 PQPSAPLTSSLY----PVLPKTDPPKPPVLPPDPSSPLIDLLTE--EPPPYPGGHGPLPS 243 Query: 489 APTSPS 506 P +P+ Sbjct: 244 GPRTPT 249
>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor| (Mu-protocadherin) (GP100) Length = 862 Score = 32.3 bits (72), Expect = 1.3 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 4/144 (2%) Frame = +3 Query: 144 GGPPTVAAG*VPTWKALRAEAGQVLKLFRALEQSVVESPGLSRRS----PSSATSGQPRP 311 GG PT+ P +A Q K Q +V +PG S S PS +++ P+P Sbjct: 524 GGSPTLGISTSPQTATPGGDATQTPK--PGTSQPMVPTPGASTSSQPATPSGSSTQTPKP 581 Query: 312 GPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCA 491 G S P+ P + + P S++ P + P Sbjct: 582 GTSQPMV---------PTPGASTSSQPATPSGSSTQTPRPGTSQPMVPTPGASTSSQPAT 632 Query: 492 PTSPSRPGAPGSFVASMEQPVVGL 563 P+ ++ PG+ + P+ G+ Sbjct: 633 PSGSTQTPKPGTSQPTTTGPISGV 656
>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3| Length = 1620 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 3/96 (3%) Frame = +3 Query: 243 SVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRR 422 S+ P L+ +P +A +P P P W R P + + PP + Sbjct: 1440 SLSNHPPLAHPTPENAAGSSEQPLPPGPS----WGPR----PSLSGSGDGRPPPLLQ--- 1488 Query: 423 TTAWRHSWEPPPRSSGEQPAPCAPTS---PSRPGAP 521 W PPPR G PA APT PSRP P Sbjct: 1489 -------W-PPPRLPGPPPASPAPTEGPRPSRPSGP 1516
>CLCN1_HUMAN (P35523) Chloride channel protein, skeletal muscle (Chloride channel| protein 1) (ClC-1) Length = 988 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Frame = +3 Query: 375 TRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGS---FVASME 545 T+ +L PP S R TT+ R S PP S+ P RPGA G+ AS E Sbjct: 874 TKSGVQLRPPLASFRNTTSTRKSTGAPPSSAENWNLP-----EDRPGATGTGDVIAASPE 928 Query: 546 QPVVGLRP 569 PV P Sbjct: 929 TPVPSPSP 936
>ZN688_HUMAN (Q8WV14) Zinc finger protein 688| Length = 782 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 2/82 (2%) Frame = +3 Query: 399 PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSP--SRPGAPGSFVASMEQPVVGLRPN 572 PP + ++ W+ R PAP P +RPG S V P Sbjct: 485 PPLEKAAEAALFKGKWDDEAREMAPPPAPLLAPRPGETRPGCRKPGTVSFADVAVYFSP- 543 Query: 573 SEWIRSRASQRPLYMSIRAKLF 638 EW R +QR LY + + + Sbjct: 544 EEWGCLRPAQRALYRDVMQETY 565
>Y966_TREPA (O83932) Hypothetical protein TP0966 precursor| Length = 544 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLR 566 P PR+ GEQP+P PT+ PG G+ A VG R Sbjct: 60 PEPRAEGEQPSPLVPTALPVPG--GAVAARAAPGTVGPR 96
>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1| Length = 2173 Score = 32.0 bits (71), Expect = 1.7 Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 28/140 (20%) Frame = +3 Query: 267 SRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSW 446 SR +P ATS P P PS+ A+ P T + P+ + R+ R S Sbjct: 1115 SRMTPFPATSAAPEPHPSTSTAQ----------PVTPK-------PTSQATRSRTNRSSV 1157 Query: 447 EPP-----------PRSSGEQPAPCAPTSPSRPG--------APGSFVA---------SM 542 + P P +S +QP PTS + G P + V S Sbjct: 1158 KTPEPVVPTVPELQPSTSTDQPVASEPTSQATRGRKNRSSVKTPEAVVPTALELHPSNST 1217 Query: 543 EQPVVGLRPNSEWIRSRASQ 602 +QPV +P SE IRSR ++ Sbjct: 1218 DQPVTP-KPTSEAIRSRTNR 1236
>FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) (Transcription factor FKH-1) (Mesoderm/mesenchyme forkhead 1) (MF-1) Length = 553 Score = 32.0 bits (71), Expect = 1.7 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +3 Query: 438 HSWEPPPRSSGEQPAPCAPTSPSRPGAPG 524 H EPPP +G QPAP AP + APG Sbjct: 190 HLQEPPPPQAGRQPAP-APPEQAEGSAPG 217
>FOXL2_HUMAN (P58012) Forkhead box protein L2| Length = 376 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEW 581 PP + S PA AP +P+ APG A QP + + S W Sbjct: 318 PPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYW 361
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEW 581 PP + S PA AP +P+ APG A QP + + S W Sbjct: 317 PPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYW 360
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 Query: 523 PGAPGLEGEVGAQGAGCSPEERGGG 449 PGAPG GE GA+G +P E+G G Sbjct: 811 PGAPGQNGEPGAKGERGAPGEKGEG 835
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -1 Query: 526 EPGAPGLEGEVGAQGAGCSPEERGGG 449 EPG+ G+ G G QG G P ERG G Sbjct: 617 EPGSVGIVGAAGHQGPGGMPGERGAG 642
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 Query: 523 PGAPGLEGEVGAQGAGCSPEERGGG 449 PGAPG GE GA+G +P E+G G Sbjct: 656 PGAPGQNGEPGAKGERGAPGEKGEG 680
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 Query: 523 PGAPGLEGEVGAQGAGCSPEERGGG 449 PGAPG GE GA+G +P E+G G Sbjct: 811 PGAPGQNGEPGAKGERGAPGEKGEG 835 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Frame = -1 Query: 559 PTTGCSIEATNEPGAPGLEGEVGAQGA------GCSPEERG 455 P TG +PG PG +GEVGA GA +P ERG Sbjct: 643 PGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERG 683
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 31.6 bits (70), Expect = 2.3 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 15/96 (15%) Frame = -1 Query: 667 NAHHHMGLLT-------NSLARID----MYRGRWLARLRIHSELGRSP-TTGCSIEATNE 524 NAH +G NS+ D + R ++ R + HS+ P + C Sbjct: 38 NAHRELGEFKGFANDAWNSMVNHDDATRVARSVFVRRHKKHSQCNCGPQASNCPAGPPGP 97 Query: 523 PGAPG---LEGEVGAQGAGCSPEERGGGSHEWRHAV 425 PGAPG L+G+ G G P G SHE + + Sbjct: 98 PGAPGDRGLDGQPGGAGNPGQPGVAGPKSHEQQECI 133
>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1| kinase) (SAD1A) Length = 794 Score = 31.6 bits (70), Expect = 2.3 Identities = 31/100 (31%), Positives = 38/100 (38%) Frame = +3 Query: 228 RALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPS 407 RALE + S S+ S P P SP+ F PE E S Sbjct: 435 RALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVFSF--------SPEPGAGDEARGGGS 486 Query: 408 VSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGS 527 +S+ T S P +GEQP P + S PG PGS Sbjct: 487 PTSKTQTL--PSRGPRGGGAGEQPPPPSARSTPLPGPPGS 524
>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1 (EC| 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 31.6 bits (70), Expect = 2.3 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Frame = +3 Query: 252 ESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTA 431 +S GL +P + + P +P R W L V E T ++S R+ Sbjct: 1456 DSKGLQEPAPLAPSV------PEAPRGRERWV--LEVVEERT---------TLSGPRSKP 1498 Query: 432 WRHSWEPPPRSSGEQPAPC-APTSPSRPGAPGSFVASMEQPVVGL 563 P P++ PA C AP+S P P S + S +P VGL Sbjct: 1499 ASPKLSPEPQTPSLAPAKCSAPSSAVTPVPPASLLGSGTKPQVGL 1543
>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 protein) Length = 549 Score = 31.6 bits (70), Expect = 2.3 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%) Frame = +3 Query: 231 ALEQSVVES--PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PP 404 A E++VVE+ P + S+ G P+ P +L S V P ++ PP Sbjct: 308 AKEETVVENATPDYAAGLVSTQKLGSLNNEPALPSTSYL-PSTPSVVPASSYIPSSETPP 366 Query: 405 SVSSRRTTAWRHSWEP---------------PPRSSGEQPA---PCAPTSPSRPGAPGSF 530 + SSR + R EP P +SG PA P APTSP P P + Sbjct: 367 APSSREAS--RPPEEPSAPSPTLPAQFKQRAPMYNSGLSPATPTPAAPTSPLTPTTPPAV 424 Query: 531 VASMEQPVVGL-RPNSEWIRSRASQRPLYMSIRAKLFVSSPM 653 + + P V + P ++ + ++ L ++ R ++F + M Sbjct: 425 APTTQTPPVAMVAPQTQAPAQQQPKKNLSLT-REQMFAAQEM 465
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 18/59 (30%) Frame = +3 Query: 399 PPSVSS--------RRTTAWRHSWEPPPRSSGEQPAPCAP----------TSPSRPGAP 521 PPSVSS RRT WE P S+G P P P SP PG P Sbjct: 2427 PPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLP 2485
>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| (GAS2-related protein on chromosome 22) (GAR22 protein) Length = 681 Score = 31.6 bits (70), Expect = 2.3 Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 1/107 (0%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWR 437 P L +S G+PR P A+ S R +R + + + RR + Sbjct: 399 PALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAV----LLVRRDRDGQ 454 Query: 438 HSWEPPPRSSGEQPAPCAPTSPSR-PGAPGSFVASMEQPVVGLRPNS 575 HSW P R SG T +R P AP S P +G P S Sbjct: 455 HSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPAS 501
>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] Length = 425 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/83 (28%), Positives = 34/83 (40%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWR 437 P L P ++ P PS+PL L+ V P++ + + PP SS Sbjct: 176 PFLPPPKPPTSLPQPLSPQPSAPLTSSLY----PVLPKSDPPKPPVLPPDPSSPLIDLLT 231 Query: 438 HSWEPPPRSSGEQPAPCAPTSPS 506 EPPP G P P P +P+ Sbjct: 232 E--EPPPYPGGHGPPPSGPRTPT 252
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 31.2 bits (69), Expect = 3.0 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSP--SRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQRPLYMSI 623 PPPRS G P AP+ P S G G S + G P E + SR R +Y+S Sbjct: 153 PPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSR---RDVYLSP 209 Query: 624 R 626 R Sbjct: 210 R 210
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.2 bits (69), Expect = 3.0 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 3/101 (2%) Frame = +3 Query: 255 SPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAW 434 SP RR S++ + P PS+ R R+ PE + + P S+RR ++ Sbjct: 689 SPPPLRRGASASPQRRQSPSPSTRPIR-----RVSRTPEPKKTKAST-PSPRSARRVSSS 742 Query: 435 RH---SWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQ 548 R S EP P+ P+P SPS +P S Q Sbjct: 743 RSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQ 783
>DXS_CAPAN (O78328) Probable 1-deoxy-D-xylulose-5-phosphate synthase,| chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) Length = 719 Score = 31.2 bits (69), Expect = 3.0 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = -2 Query: 435 ATRLSCASSPTAVRAPRGSGLFLDIPGGASTIESEREERRGLVEAGQR-----WRSMVTS 271 AT + P+ R PRG+G+ +++P G I E + R LVE G+R + S V + Sbjct: 541 ATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVE-GERVALLGYGSAVQN 599 Query: 270 CSSQA 256 C + A Sbjct: 600 CLAAA 604
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit 4)| (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 31.2 bits (69), Expect = 3.0 Identities = 43/169 (25%), Positives = 61/169 (36%) Frame = +3 Query: 6 GLRQIWSPSSELSFRQAGVSGHGRPRIVLAPDEGFFAARPLIRSGIGGPPTVAAG*VPTW 185 GL Q +P++ R+ G+ P + AP +PL + IGGP + +P Sbjct: 1022 GLGQSQAPAAS---RKQGLP-EAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVT 1077 Query: 186 KALRAEAGQVLKLFRALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVC 365 L A+ L +VV P P+ PGP+ LA L Sbjct: 1078 WVLTAQG-----LLPVPVPAVVSLP-----RPAGT------PGPAGLLATLL-------- 1113 Query: 366 PETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRP 512 P T R P R A SW+PP + E C +P+ P Sbjct: 1114 PPLTETRAAQGP------RAPALSSSWQPPANMNREPEPSCRTDTPAPP 1156
>SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)| (Proline-rich synapse-associated protein 1) (ProSAP1) (Cortactin-binding protein 1) (CortBP1) (GKAP/SAPAP-interacting protein) (SPANK-3) Length = 1474 Score = 31.2 bits (69), Expect = 3.0 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 9/118 (7%) Frame = +3 Query: 243 SVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWC------SRLRVCPETTRCREEL*PP 404 SV E G++ +P+ G P+ GP L R SR+ + T R+ L PP Sbjct: 440 SVYERQGIAVMTPT--VPGSPK-GPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPP 496 Query: 405 SVSSRRTTAWRHSWE---PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRP 569 + R+ + + E PPP+S P P +PT+ + P +P V +P P Sbjct: 497 MLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPRSPTPRVYGTIKPAFNQNP 554
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 532 TNEPGAPGLEGEVGAQGAGCSPEERG 455 T +PGAPG +GE GA G +P + G Sbjct: 188 TGQPGAPGTKGEPGAPGENGTPGQPG 213
>CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precursor (CDK5| activator 2) (Cyclin-dependent kinase 5 regulatory subunit 2) (P39) (P39I) Length = 369 Score = 31.2 bits (69), Expect = 3.0 Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 14/182 (7%) Frame = +3 Query: 24 SPSSELSFRQAGVSGHGRPRIVLAPDE--GFFAARPLIRSGIGGP----PTVAAG*VPTW 185 SP+S R+ G + + A DE G + A P + G G P+V + TW Sbjct: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPAGKGGKGESRLKRPSVLISAL-TW 66 Query: 186 KALRAEAGQVLKLFRALEQ---SVVESPGLSRRSPSS----ATSGQPRPGPSSPLARFLW 344 K L A + + K + + S P + +R+ + G G + PLA Sbjct: 67 KRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDGPDGGGTAKPLA---- 122 Query: 345 CSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSP-SRPGAP 521 + P T E PPS S PPP S G +P P P +P + P AP Sbjct: 123 -VPVPTVPTTAATCE---PPSGGSAAA--------PPPGSGGGKPPPPPPPAPQAAPPAP 170 Query: 522 GS 527 GS Sbjct: 171 GS 172
>CLIC6_MOUSE (Q8BHB9) Chloride intracellular channel 6| Length = 596 Score = 31.2 bits (69), Expect = 3.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 550 GCSIEATNEPGAPGLEGEVGAQGAGCSPEERGGG 449 G +IE EPGA LEG ++ A +P + G G Sbjct: 20 GATIEGPGEPGAADLEGREASEEAAEAPRDLGAG 53
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 24.6 bits (52), Expect(2) = 3.4 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +3 Query: 477 PAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQRPLYMSIRAKL 635 PAP A P APG ++ +P S+ R R Q L R ++ Sbjct: 2327 PAPLAGQKPPADAAPGGGSGALSRPGFEKEEASQEERQRKQQEQLLQLERERV 2379 Score = 24.6 bits (52), Expect(2) = 3.4 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 353 PPGMSRNNPLPRGALTAVGELAQDNRVAPLMG 448 P G +R PLP A+ E A APL G Sbjct: 2301 PVGAAREEPLPTTTPAAIKEAAGAPAPAPLAG 2332
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 30.8 bits (68), Expect = 3.9 Identities = 31/104 (29%), Positives = 39/104 (37%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWR 437 PG+ P S S RP P P C + P T + + PP+ ++ R Sbjct: 116 PGVRASPPRSGVSSSARPAPGCPRPA---CEPV-YGPLTMSLKPQPQPPAPATGRKPGGG 171 Query: 438 HSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRP 569 P G PA A TS S AP + VAS G RP Sbjct: 172 LLSSP-----GAAPASAAVTSASVVPAPAAPVASSSAAAGGGRP 210
>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Euchromatic histone-lysine N-methyltransferase 2) (HLA-B-associated transcript 8) (Protein G9a) Length = 1263 Score = 30.8 bits (68), Expect = 3.9 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +3 Query: 66 GHGRPRIVLAPDEGFFAARPLIRSGIGGPPTVAAG*VPTWKALRAEAGQVL--KLFRALE 239 G GRPR +L+ + P + +G+ GPP +P+ AE G +L K R Sbjct: 35 GRGRPRSLLSLPRAQASWAPQLPAGLTGPPVPC---LPSQGEAPAEMGALLLEKEPRGAA 91 Query: 240 QSVVESPGLSRRSPSSATSGQP----RPGPSSP 326 + V S G + +S + P GPSSP Sbjct: 92 ERVHSSLGDTPQSEETLPKANPDSLEPAGPSSP 124
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 30.8 bits (68), Expect = 3.9 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 4/107 (3%) Frame = +3 Query: 303 PRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSG---- 470 P P P P A+ + S L++ + PP +S +T H+ P P S+G Sbjct: 346 PPPPPVIPSAQTAFVSPLQMPMQ---------PPFPASASST---HAAPPHPPSTGLLVT 393 Query: 471 EQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQRPL 611 P P P P P PGS ++S P+ G P +E R +Q P+ Sbjct: 394 APPPPGPPPPPPGPPGPGSSLSS--SPMHG-PPVAEAKRQEPAQPPI 437
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)| Length = 648 Score = 30.8 bits (68), Expect = 3.9 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQP 551 PPP ++P+P + +R AP ++ ME+P Sbjct: 370 PPPAQETQEPSPILDSEETRAAAPQAWAGPMEEP 403
>KISS1_HUMAN (Q15726) Metastasis-suppressor KiSS-1 precursor (Kisspeptin-1)| [Contains: Metastin (Kisspeptin-54); Kisspeptin-14; Kisspeptin-13; Kisspeptin-10] Length = 145 Score = 30.8 bits (68), Expect = 3.9 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +3 Query: 414 SRRTTAWRHSWEPPPRSSG--EQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEW 581 SRR T S PPP SSG +QP AP S P G+ + E+ + PN W Sbjct: 65 SRRGT----SLSPPPESSGSRQQPGLSAPHSRQIPAPQGAVLVQREKDL----PNYNW 114
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +3 Query: 423 TTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNS 575 T++ HS + PPR PA P S GAPG VA P VG+ +S Sbjct: 105 TSSANHSLQSPPR-----PALPNPYMSSSTGAPGGPVAPALPPPVGINSSS 150
>RRP44_HUMAN (Q9Y2L1) Exosome complex exonuclease RRP44 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 44) (DIS3 protein homolog) Length = 958 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 530 CGFDGAACCGTAPQLRVDSKPSKPAPPVHVDPSQAVCQQPHVMV 661 CG G A CG A + +P P DP+ +VC QPH ++ Sbjct: 31 CGAPGCAACGGAHE----GPALEPQPQ---DPASSVCPQPHYLL 67
>M3K10_HUMAN (Q02779) Mitogen-activated protein kinase kinase kinase 10 (EC| 2.7.11.25) (Mixed lineage kinase 2) (Protein kinase MST) Length = 954 Score = 30.8 bits (68), Expect = 3.9 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Frame = -2 Query: 357 GGASTIESER---EER-RGLVEAGQRWRSMVTSCSSQAIRRQIAPGHGKVSEL 211 G +ST++ ER EER +GL E ++W S + IAPG ++E+ Sbjct: 560 GPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEM 612
>GUND_CELFI (P50400) Endoglucanase D precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 747 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = -2 Query: 630 WLGSTCTGGAGLLGFESTRSWGAVPQQAAPSKPQTSLELQAWKARWAHKALAARRRSEAV 451 W ST TGG+G+ G+E R V + S T L AA + V Sbjct: 570 WTASTDTGGSGVTGYEVYRGSTLVARPTGTSHTVTGLS-------------AATAYTFTV 616 Query: 450 APMSGATRLSCASSPTAV 397 + A +S AS+P V Sbjct: 617 RAVDAAGNVSAASAPVGV 634 Score = 30.4 bits (67), Expect = 5.1 Identities = 25/85 (29%), Positives = 31/85 (36%) Frame = -2 Query: 630 WLGSTCTGGAGLLGFESTRSWGAVPQQAAPSKPQTSLELQAWKARWAHKALAARRRSEAV 451 W ST TGG+G+ G+E R V A S T L A + +V Sbjct: 474 WSASTDTGGSGVAGYEVYRGTTLVGTTTATSYTVTGL-------------AADSAYTFSV 520 Query: 450 APMSGATRLSCASSPTAVRAPRGSG 376 GA S AS+ R G G Sbjct: 521 RAKDGAGNTSAASAAVTARTAAGGG 545
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 30.4 bits (67), Expect = 5.1 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 526 EPGAPGLEGEVGAQGAGCSPEERG 455 +PGAPG++GE GA G +P + G Sbjct: 189 QPGAPGVKGEPGAPGENGTPGQTG 212
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGS 527 PP SG + +P A SP R GAPG+ Sbjct: 997 PPGESGREGSPGAEGSPGRDGAPGA 1021
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGS 527 PP SG + +P A SP R GAPG+ Sbjct: 997 PPGESGREGSPGAEGSPGRDGAPGA 1021
>CI082_HUMAN (Q9H8G2) Protein C9orf82| Length = 361 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = +3 Query: 192 LRAEAGQVLKLFRALEQSVVESPGLSRRSPS---SATSGQPRPGPSSPLARFL 341 +++EAGQ+ L + +E+SV E GL+ SP+ +AT P P P A+ L Sbjct: 284 VQSEAGQIDDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQL 336
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 30.4 bits (67), Expect = 5.1 Identities = 32/129 (24%), Positives = 43/129 (33%), Gaps = 2/129 (1%) Frame = +3 Query: 228 RALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLAR--FLWCSRLRVCPETTRCREEL*P 401 R L +SVVES P + P P P PL R L C R+ E Sbjct: 40 RFLRRSVVESD--QEEPPGLEAAEAPGPQPPQPLQRRVLLLCKTRRLIAE---------- 87 Query: 402 PSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSEW 581 R+ G AP ++PGAPG+ + +PV P + Sbjct: 88 -------------------RARGRPAAPAPAALVAQPGAPGAPADAGPEPVGTQEPGPDP 128 Query: 582 IRSRASQRP 608 I + P Sbjct: 129 IAAAVETAP 137
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 523 PGAPGLEGEVGAQGAGCSPEERGGG 449 PGAPG GE G +G +P E+G G Sbjct: 812 PGAPGQNGEPGGKGERGAPGEKGEG 836
>KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (r-ERG) (RERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1163 Score = 30.4 bits (67), Expect = 5.1 Identities = 19/55 (34%), Positives = 22/55 (40%) Frame = -1 Query: 268 LKPGDSTTDCSRARKSFRTCPASARNAFQVGTYPAATVGGPPIPLRISGRAAKKP 104 L P S + CS AR R AS R A A G P+P R + A P Sbjct: 258 LNPDASGSSCSLARTRSRESCASVRRASSADDIEAMRAGALPLPPRHASTGAMHP 312
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 30.4 bits (67), Expect = 5.1 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Frame = +3 Query: 399 PPSVSS--------RRTTAWRHSWEPPPRSSGEQPAPCAP----------TSPSRPGAPG 524 PPSVSS RRT WE P S+G P P P SP PG Sbjct: 2382 PPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPG--- 2438 Query: 525 SFVASMEQPVVGLRPNSEW 581 +A+ P+ G P+ W Sbjct: 2439 --LAAGSGPLAG--PHHAW 2453
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 5.1 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 526 EPGAPGLEGEVGAQGAGCSPEERG 455 +PGAPG++GE GA G +P + G Sbjct: 191 QPGAPGVKGEPGAPGENGTPGQTG 214
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 5.1 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 526 EPGAPGLEGEVGAQGAGCSPEERG 455 +PGAPG++GE GA G +P + G Sbjct: 191 QPGAPGVKGEPGAPGENGTPGQTG 214 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Frame = -1 Query: 526 EPGAPGLEGEVGAQGAGCSPEERG-----GGSHEWRHAVVLRELTDGGQSSSR 383 EPG G G GA G G P ERG GG E + E+ + G+ +R Sbjct: 623 EPGVLGAPGTAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGAR 675
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = +3 Query: 285 SATSGQPRPGPSSPL-ARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPR 461 ++TS P P PSS + A L ++ R P R P + + + + PPPR Sbjct: 285 NSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344 Query: 462 SSGEQPAPCAPTSPSRPGAP 521 S+ P P S P P Sbjct: 345 SNAAGSIPLPPQGRSAPPPP 364
>NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA| Length = 892 Score = 30.4 bits (67), Expect = 5.1 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 399 PPSVSSRRTTAWRHSWEPPPRSSGEQPA-PCAPTSPS 506 PPSVSS+ A +P +S+G QPA P TSP+ Sbjct: 661 PPSVSSQSVVATTDLSQPVSQSAGNQPANPSMGTSPN 697
>PAIP1_HUMAN (Q9H074) Polyadenylate-binding protein-interacting protein 1| (Poly(A)-binding protein-interacting protein 1) (PABP-interacting protein 1) (PAIP-1) Length = 479 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/56 (39%), Positives = 26/56 (46%) Frame = +3 Query: 351 RLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGA 518 R R P + L PP + RTT PPP + E PA +P PSRPGA Sbjct: 40 RARHQPPQPKAPGFLQPPPLRQPRTT-------PPPGAQCEVPA--SPQRPSRPGA 86
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 30.4 bits (67), Expect = 5.1 Identities = 25/97 (25%), Positives = 36/97 (37%) Frame = +3 Query: 279 PSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPP 458 P +S P+PG SS +R P + + S + A + +P P Sbjct: 101 PRPGSSSGPKPGRSS-------AARTSATPRPGLIKSS---GASSQQEPPAAKPESKPTP 150 Query: 459 RSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRP 569 + P P AP +PGAP + P G RP Sbjct: 151 KPGQNVPKPHAPAPKPKPGAPS------KSPKPGARP 181
>CIC_HUMAN (Q96RK0) Protein capicua homolog| Length = 1608 Score = 30.4 bits (67), Expect = 5.1 Identities = 34/129 (26%), Positives = 46/129 (35%), Gaps = 6/129 (4%) Frame = +3 Query: 201 EAGQVLKLFRALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTR 380 EAG + A Q + P +P S GQP P P+ P W R P Sbjct: 1193 EAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTP-PAPPPLPETWTPTARSSPPLPP 1251 Query: 381 CREE---L*PPSVSSRRTTAWRHSWEPPPR---SSGEQPAPCAPTSPSRPGAPGSFVASM 542 EE P + + + W P + + GE P P +P +P+ APG S Sbjct: 1252 PAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSP-APAPAVAPGGSSESS 1310 Query: 543 EQPVVGLRP 569 G P Sbjct: 1311 SGRAAGDTP 1319
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 30.4 bits (67), Expect = 5.1 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 13/100 (13%) Frame = +3 Query: 261 GLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVS--SRRTTAW 434 G R++ SS++S PRP PL P +R ++ PP R + Sbjct: 221 GSVRQNLSSSSSPFPRP----PLP-----------PTPSRALDDKPPPPPPPVGNRPSMH 265 Query: 435 RHSWEPPPRSSGEQPAPCA-----------PTSPSRPGAP 521 R + PPP + + P P P PSRPG P Sbjct: 266 REAVPPPPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGPP 305
>ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 990 Score = 30.4 bits (67), Expect = 5.1 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 17/126 (13%) Frame = +3 Query: 222 LFRALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLR-------------- 359 L R+ ++ S G+ S SS + +PG P++ L Sbjct: 356 LQRSERSVIIPSSGIKHVSVSSIEASTQQPGVQPPVSTATSPPALESRSTQEASPKAITG 415 Query: 360 --VCPETTRCREEL*PPSVSSRRTTAWRHSWEPP-PRSSGEQPAPCAPTSPSRPGAPGSF 530 + P T RE+ PP R +A + EPP P ++ P +PS PG P Sbjct: 416 ETIAPNKTP-REDARPPRTLPRAFSAKYVTGEPPQPEDLEKRVPPTMTRTPSSPGIPEGS 474 Query: 531 VASMEQ 548 + S E+ Sbjct: 475 LLSGER 480
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Frame = -2 Query: 492 AHKALAARRRSEAVAPMSGATRLSCASSPTAV-----RAPRGSGLFLDIPGGASTIESER 328 A + A R++ A A GA C P A+ AP+G G + PGG+ ++ S+ Sbjct: 1072 ASRQAAIRQQPRARADSLGAP--CCGLDPHAIPGRSREAPKGPGAWRQGPGGSGSMSSDS 1129 Query: 327 E--ERRGLVEAGQRW 289 + G+ E RW Sbjct: 1130 SSPDSPGIPERSPRW 1144
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGS 527 PP SG + AP A SP R G+PG+ Sbjct: 570 PPGESGREGAPGAEGSPGRDGSPGA 594
>RHG08_MOUSE (Q9CXP4) Rho-GTPase-activating protein 8| Length = 425 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +3 Query: 342 WCSRLRVCPETTRCREEL*PPSVSSRRTTAWR-HSWEPPPRSSGEQPAPCAPT 497 +CS LR E +C + L PP V H +PPP + P P PT Sbjct: 138 YCSNLRELREHLQCDQLLIPPEVVRYDEKLQNLHKGQPPPPTKTPPPRPPLPT 190
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGS 527 PP SG + AP A SP R G+PG+ Sbjct: 1008 PPGESGREGAPGAEGSPGRDGSPGA 1032
>COHA1_CANFA (Q9N281) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 709 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -1 Query: 535 ATNEPGA---PGLEGEVGAQGAGCSPEERG 455 A EPG PG+ G VG +G+G SP RG Sbjct: 649 AAGEPGVQGPPGVPGSVGPKGSGGSPGPRG 678
>SOX30_HUMAN (O94993) Transcription factor SOX-30| Length = 753 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 399 PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVV 557 PP + T+ W + EPPP S P A S + + G VAS QP V Sbjct: 19 PPPLPVEGTSFWAAAMEPPPSS----PTLSAAASATLASSCGEAVASGLQPAV 67
>SMAL1_MOUSE (Q8BJL0) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A-like protein 1 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 1) (HepA-related protein) (mharp) Length = 910 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 5/86 (5%) Frame = +3 Query: 366 PETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASME 545 P ++RC + PS + T W+ + GE C +PS PGA Sbjct: 84 PHSSRCSQ----PSPAEETTGLWK--------TQGEMSTACPKPNPSPPGA-------SN 124 Query: 546 QPVVGLR-----PNSEWIRSRASQRP 608 QP++G + P + W +S P Sbjct: 125 QPLLGYKSSEGQPQATWDTGASSSGP 150
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +3 Query: 399 PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAP 521 P + SSRR+ A S P PRS P+P S SR P Sbjct: 236 PKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLP 276
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/73 (28%), Positives = 30/73 (41%) Frame = +3 Query: 303 PRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPA 482 P P +S +A + CP+ R + P ++ S R PP +S PA Sbjct: 691 PPPQVTSAIATLQQAVAMSFCPQVAR--PLVGPLALGSPRLVRRAPPGPLPPAASPGPPA 748 Query: 483 PCAPTSPSRPGAP 521 P +PS P AP Sbjct: 749 ASPPAAPSSPRAP 761
>DXS_CAUCR (Q9A6M5) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 640 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 Query: 435 ATRLSCASSPTAVRAPRGSGLFLDIPGGASTIE 337 AT P+A R PRG GL LD+P A +E Sbjct: 461 ATAAEIDDRPSAFRYPRGEGLGLDMPAIAEPLE 493
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Frame = +3 Query: 270 RRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWE 449 R P T+GQPR GP AR + + P ++R SV ++W Sbjct: 23 RPPPPLGTAGQPRLGPPPRRAR-RFSGKAEPRPRSSRLSRR---SSVDLGLLSSWSLPAS 78 Query: 450 P------PPRSSGEQPAPCAPTSPSRP 512 P PP S+G PA P S P Sbjct: 79 PAPDPPDPPDSAGPGPARSPPPSSKEP 105
>SHAN2_HUMAN (Q9UPX8) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)| Length = 1253 Score = 30.0 bits (66), Expect = 6.6 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 15/108 (13%) Frame = +3 Query: 243 SVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWC------------SRLRVCPETTRCR 386 SV E G++ +P+ P SP A FL SR+ + T R Sbjct: 218 SVYERQGIAVMTPTV---------PGSPKAPFLGIPRGTMRRQKSIDSRIFLSGITEEER 268 Query: 387 EEL*PPSVSSRRTTAWRHSWE---PPPRSSGEQPAPCAPTSPSRPGAP 521 + L PP + R+ + + E PPP+S P P +PT+ + P +P Sbjct: 269 QFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPKSP 316
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 30.0 bits (66), Expect = 6.6 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 16/146 (10%) Frame = -2 Query: 621 STCTGGAGLLGFESTRSWGAVPQQAAPSKPQTSLELQAWKARWAHKALAARRRSEAVAPM 442 STC+ + ST + A+P A P P+T+ A W + +A R RS +A Sbjct: 38 STCS-----MKINSTCTLTALPIAALPG-PRTTSHYSTAAANWCYATVAPRARSSTIAAS 91 Query: 441 SGATRLSCASS-------PTAVRAPRGSGLFLD-----IPGGASTIESEREERR----GL 310 G S ++S T V+A + +D + G ++E +++ Sbjct: 92 LGTPAPSSSASFRPKLIRTTPVQAAPVAPALMDAAVERLKTGFEKFKTEVYDKKPDFFEP 151 Query: 309 VEAGQRWRSMVTSCSSQAIRRQIAPG 232 ++AGQ + MV +C+ + + G Sbjct: 152 LKAGQAPKYMVFACADSRVCPSVTLG 177
>MYRB_MICGR (P43433) Mycinamicin-resistance protein myrB (EC 2.1.1.-)| Length = 311 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -1 Query: 619 DMYRGRWLARLRIHSELGRSPT-TGCSIEATNEPGAPGLEGEVGAQGAGCSP---EERGG 452 D+ G W + R++ E+G P G S+ A PG+ G + + +G P RGG Sbjct: 252 DLKAGHWASLYRLYREVGTRPAPAGRSVRA--RPGSVGPDRSLPPRGLRSGPPRARRRGG 309 Query: 451 GS 446 G+ Sbjct: 310 GA 311
>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)| Length = 1845 Score = 30.0 bits (66), Expect = 6.6 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Frame = +3 Query: 228 RALEQSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPS 407 + + + +++ +S +S S++TS +P P SS + ++ P PP Sbjct: 210 KKVTRKAIQTSPVSNKS-SASTSRKPAPASSSNSKH----APAKMPPPP--------PPP 256 Query: 408 VSSRRTTAWRHSWEPPP-RSSGEQPAPCAPTSPSRPGAPGS 527 + R +A H P RS P+P P +P +P A G+ Sbjct: 257 KAPARKSATTHETRPSASRSRRRSPSPRRPATPPKPAAVGT 297
>YN91_SCHPO (Q9Y808) Hypothetical protein C146.01 in chromosome II| Length = 1063 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +3 Query: 408 VSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNSE 578 +SS RT + +P P+S +Q A P +PS V+S +P+ G PN++ Sbjct: 723 ISSLRTASINQQQQPQPQSQQQQQASQFPQAPS--------VSSNVRPINGSIPNAQ 771
>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)| (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (TPA-induced sequence 11) Length = 319 Score = 30.0 bits (66), Expect = 6.6 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 21/91 (23%) Frame = +3 Query: 363 CPETTRCR------EEL*PP--------SVSSRRTTAWRHSWEPPPRSSGEQPAPCA--- 491 CP +RC E+L P S+S + R S PPP SG + C+ Sbjct: 148 CPYGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLPSGRRSSPPPPGFSGPSLSSCSFSP 207 Query: 492 PTSPSRPG----APGSFVASMEQPVVGLRPN 572 +SP PG +P +F A+ PV PN Sbjct: 208 SSSPPPPGDLPLSPSAFSAAPGTPVTRRDPN 238
>GSC_HUMAN (P56915) Homeobox protein goosecoid| Length = 257 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +2 Query: 542 GAACCGTAPQLRVDSKPSKPAPPVHVDP-SQAVCQQPHVMV 661 G ACCG P L P PP + P S V PH M+ Sbjct: 96 GPACCGAVPPLGAQQCSCVPTPPGYEGPGSVLVSPVPHQML 136
>GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] Length = 371 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = +3 Query: 309 PGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPC 488 P PS+PL L+ V P+ + + PP SS EPPP G P P Sbjct: 190 PQPSAPLTSSLY----PVVPKPDPPKPPVLPPDPSSPLIDLLTE--EPPPYPGGHGPPPS 243 Query: 489 APTSPS 506 P +P+ Sbjct: 244 GPRTPA 249
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.0 bits (66), Expect = 6.6 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 535 ATNEPGAPGLEGEVGAQGAGCSPEERGGG 449 A + GAPG +GE G GA SP + G G Sbjct: 273 AKGDSGAPGPKGEAGQPGANGSPGQPGPG 301 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/72 (31%), Positives = 25/72 (34%) Frame = +3 Query: 309 PGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPC 488 P P PL VCP+TT P + T P S G AP Sbjct: 74 PNPEIPLGECC-----PVCPQTT--------PQPTELPYTQGPKGDPGSPGSPGRTGAPG 120 Query: 489 APTSPSRPGAPG 524 P P PGAPG Sbjct: 121 PPGQPGSPGAPG 132
>BM88_HUMAN (Q8N111) BM88 antigen| Length = 149 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/52 (40%), Positives = 25/52 (48%) Frame = -1 Query: 595 ARLRIHSELGRSPTTGCSIEATNEPGAPGLEGEVGAQGAGCSPEERGGGSHE 440 A L HS L +PT S +AT EP PG +G + A P RG S E Sbjct: 70 ALLNNHSNLKPAPTVPSSPDATPEPKGPG-DGAEEDEAASGGPGGRGPWSCE 120
>BCL2_CHICK (Q00709) Apoptosis regulator Bcl-2| Length = 233 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRP 569 P P ++ A +S RP PGS AS P GLRP Sbjct: 43 PAPAAAPAAVAAAGASSHHRPEPPGSAAASEVPPAEGLRP 82
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = +3 Query: 369 ETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVAS 539 E++RC E+ S S+ + S P P SS AP SPS PGAP + V S Sbjct: 1323 ESSRCSLEVSLNSPSAASSPGLMMSVSPVPSSS-------APISPSPPGAPPAKVPS 1372
>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 580 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = +3 Query: 309 PGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSWEPPPRSSGEQPAPC 488 P PS+PL L+ V P+ + + PP SS EPPP G P P Sbjct: 190 PQPSAPLTSSLY----PVVPKPDPPKPPVLPPDPSSPLIDLLTE--EPPPYPGGHGPPPS 243 Query: 489 APTSPS 506 P +P+ Sbjct: 244 GPRTPA 249
>GSC_MOUSE (Q02591) Homeobox protein goosecoid| Length = 256 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +2 Query: 542 GAACCGTAPQLRVDSKPSKPAPPVHVDP-SQAVCQQPHVMV 661 G ACCG P L P PP + P S V PH M+ Sbjct: 96 GPACCGAVPPLGAQQCSCVPTPPGYEGPGSVLVSPVPHQML 136
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 25.4 bits (54), Expect(2) = 8.4 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAP 521 PPP +G P P P PG P Sbjct: 359 PPPSMAGSTAPPPPPPPPPPPGPP 382 Score = 22.7 bits (47), Expect(2) = 8.4 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +3 Query: 279 PSSATSGQPRPGPSS 323 PSSA SG P P P S Sbjct: 348 PSSAPSGPPPPPPPS 362
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -1 Query: 574 ELGRSPTTGCSIEATNEPGAPGLEGEVGAQGAGCSPEERGGGSHEWRHAVV 422 + G S G S++A A G G GA GAG P++ G GS + R V Sbjct: 225 DAGGSIDAGGSVDAGGSMDAEGPAG--GAHGAGGEPQDLGAGSPQPRSEAV 273
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 12/53 (22%) Frame = +3 Query: 399 PPSVSSRRTTAWRHSWEPPP------------RSSGEQPAPCAPTSPSRPGAP 521 PP R + R + PPP R S AP P PSRPG P Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
>GRIK5_HUMAN (Q16478) Glutamate receptor, ionotropic kainate 5 precursor| (Glutamate receptor KA-2) (KA2) (Excitatory amino acid receptor 2) (EAA2) Length = 980 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +3 Query: 147 GPPTVAAG*VPTWKALRAEAGQVLKLFRALEQSVVESPGLSRRSPSSATSG-QPRPGPSS 323 GPP+ A PT Q + +AL S +P P+ ATS +PRPGP+ Sbjct: 914 GPPSGARPAAPT-PCTHVRVCQECRRIQALRASGAGAPPRGLGVPAEATSPPRPRPGPAG 972 Query: 324 P 326 P Sbjct: 973 P 973
>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent| kinase inhibitor p57) (p57KIP2) Length = 316 Score = 29.6 bits (65), Expect = 8.7 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = +3 Query: 453 PPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQ 548 P +SSG+ PAPC PS APG V S+EQ Sbjct: 284 PEKSSGDVPAPC----PSPSAAPG--VGSVEQ 309
>Y463_MYCPN (P75320) Hypothetical protein MPN463 (H08_orf157a)| Length = 157 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +3 Query: 270 RRSPSSATSGQPRPGPSSPL-ARFLW-CSRL-RVCPETTRCREEL*PPSVSSRRTTAWRH 440 + SP++++S +PRPGP L AR W C L R T + PS +T++ + Sbjct: 88 KTSPATSSSLKPRPGPRGYLNARLSWRCPTLSRKVRVPTIKVPMVRAPSTKPSKTSSSNN 147 Query: 441 SWEPPPRSSG 470 W PR G Sbjct: 148 PWPLTPRMRG 157
>NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4| (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 Score = 29.6 bits (65), Expect = 8.7 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 9/106 (8%) Frame = +3 Query: 255 SPGLSRRSPSSATSGQPRPGPSSPLAR---------FLWCSRLRVCPETTRCREEL*PPS 407 SP LSRR +P P P PLAR ++ P+ TR Sbjct: 281 SPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTR--------R 332 Query: 408 VSSRRTTAWRHSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASME 545 SS + A S E P +G+ P A S + PG VA M+ Sbjct: 333 TSSEQAVALPRS-EEPASCNGKLPLG-AEESVAPPGGSRKEVAGMD 376
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 29.6 bits (65), Expect = 8.7 Identities = 33/114 (28%), Positives = 41/114 (35%), Gaps = 8/114 (7%) Frame = +3 Query: 252 ESPGLSRRSPSSATSGQP-RPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTT 428 ++P +R P T GQ PG P A P + PPS + RT Sbjct: 199 KAPAYNREKPLPPTPGQRLHPGREGPPA-----------PPPVKP-----PPSPVNIRTG 242 Query: 429 AWRHSWEPPPRSSGEQPA-PCAPTSPSRPGAP------GSFVASMEQPVVGLRP 569 S PPP + P P P+SP+ AP S PV GL P Sbjct: 243 PSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAP 296
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 29.6 bits (65), Expect = 8.7 Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 23/128 (17%) Frame = +3 Query: 255 SPGLSRRSPSSATSGQPRPGPS--------------------SPLARFLWCSRLRVCPET 374 SP RR S++ G+ P PS SP R + R+ PE Sbjct: 714 SPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSTRPI--RRVSRTPEP 771 Query: 375 TRCREEL*PPSVSSRRTTAWRH---SWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASME 545 + ++ P S RR ++ R S EP + P+P SPS +P + Sbjct: 772 KKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPAKKAK 831 Query: 546 QPVVGLRP 569 P L P Sbjct: 832 SPTPSLSP 839 Score = 29.6 bits (65), Expect = 8.7 Identities = 34/93 (36%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Frame = +3 Query: 258 PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PP---SVSSRRTT 428 P RRSPS A P P P P R R R R R PP S S RR + Sbjct: 566 PARRRRSPSPA----PPPPPPPPPPR-----RRRSPTPPPRRRTPSPPPRRRSPSPRRYS 616 Query: 429 ---AWRHSWEPPP--RSSGEQPAPCAPTSPSRP 512 R+S PPP R++ P P SPS P Sbjct: 617 PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 649
>PPIB_STRCH (P77949) Peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) (PPIase| B) (Rotamase B) (Cyclophilin ScCypB) (S-cyclophilin) Length = 175 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 302 LARGGARW*PPAQARRFDDRLLQGTEKFQNLSGFSPQ-CLPGGHLPGGDGWRTAN 141 LA G W P + DRL GT + +SGF Q P G+ GG G++ A+ Sbjct: 35 LATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGPGYKFAD 89
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 29.6 bits (65), Expect = 8.7 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 11/141 (7%) Frame = +3 Query: 240 QSVVESPGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLR---VCPETTRCREEL*PP-- 404 +S S P + +P P ++ W +++ PE R E PP Sbjct: 484 ESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKVSQPAAPPEGPRSTE---PPRR 540 Query: 405 ----SVSSRRTTAWRHSW--EPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLR 566 SS T+ HS +PPP+SS + AP AP PG + + P Sbjct: 541 HPESKGSSDSATSQEHSESKDPPPKSSSK--APRAPPEAPHPGKR----SCQKSPAQQEP 594 Query: 567 PNSEWIRSRASQRPLYMSIRA 629 P + + ++ ++P+ S RA Sbjct: 595 PQRQTVGTKQPKKPVKASARA 615
>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3| Length = 234 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 5/75 (6%) Frame = -2 Query: 501 ARWAHKALAARRRSEAVAPMSGATRLSCASSPTAVRAPRGSGLFLDIPGGASTI-----E 337 A W H A RR E+ S C P AP G L GA + E Sbjct: 88 ALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRE 147 Query: 336 SEREERRGLVEAGQR 292 E E R VE G+R Sbjct: 148 RELERRELAVEQGER 162
>T22D3_MOUSE (Q9Z2S7) TSC22 domain family protein 3 (Glucocorticoid-induced| leucine zipper protein) (TSC22-related-inducible leucine zipper 3) (Tilz3) Length = 137 Score = 29.6 bits (65), Expect = 8.7 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 459 RSSGEQPAPCAPTSPSRPGAPG 524 R S E+PAP AP +P P APG Sbjct: 112 RLSPEEPAPEAPETPETPEAPG 133
>SP6_MOUSE (Q9ESX2) Transcription factor Sp6 (Krueppel-like factor 14)| (Epiprofin) Length = 376 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 2/76 (2%) Frame = +1 Query: 451 HRLAPPASSQRLVRPPRLPGLELQAXXXXXXXXXXXDCAPTPSGF--EAEQASAPCTCRS 624 H L P A Q L+ PP A D A P G ++S CR Sbjct: 171 HHLLPAAGGQHLLGPPDGAKALEAAAQESQGLDSSLDAASRPKGSRRSVPRSSGQTVCRC 230 Query: 625 EPSCLSAAPCDGARCG 672 P+CL A GA CG Sbjct: 231 -PNCLEAERL-GAPCG 244
>PPSB_MYCTU (Q10978) Phenolpthiocerol synthesis polyketide synthase ppsB| Length = 1538 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = -1 Query: 277 DLLLKPGDSTTDCSRARKSFRTCPASARNAF---QVGTYPAATVGGPP 143 DLL P D S R S R+CPA R VG A +G PP Sbjct: 1394 DLLPAPEDVGKGESEFRTSLRSCPAEKRRDMLFDHVGALAATVMGMPP 1441
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 Query: 438 HSWEPPPRSSGEQPAPCAPTSPSRPGAPGSFVASM 542 H PP SSG P P P PS PG ++S+ Sbjct: 438 HLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSV 472
>DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Dual specificity protein phosphatase hVH-5) Length = 625 Score = 29.6 bits (65), Expect = 8.7 Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 11/111 (9%) Frame = +3 Query: 252 ESPGLSRR-SPSSATSGQPRPGPSSPLARFLWCSRLRVCPET-TRCREEL*PPSVSSRRT 425 E+P L + SPS A G P P SP A PE R R PP+ S R+ Sbjct: 418 EAPKLCKLDSPSGAALGLSSPSPDSPDA----------APEARPRPRRRPRPPAGSPARS 467 Query: 426 TAWRHSW---------EPPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQP 551 A HS + P AP P P +P PG++ ++ P Sbjct: 468 PA--HSLGLNFGDAARQTPRHGLSALSAPGLP-GPGQPAGPGAWAPPLDSP 515
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +3 Query: 456 PRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVGLRPNS 575 P G AP P P RPGAPG+ + PV P + Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTT 138
>NELFA_MOUSE (Q8BG30) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 homolog) (mWHSC2) Length = 530 Score = 29.6 bits (65), Expect = 8.7 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Frame = +3 Query: 237 EQSVVES--PGLSRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSV 410 E++VVE+ P + S+ G P+ P +L S V P ++ PP+ Sbjct: 289 EETVVENATPDYAAGLVSTQKLGSLNSEPTLPSTSYL-PSTPSVVPASSYIPSSETPPAP 347 Query: 411 SSRR-------------TTAWRHSWEPPPRSSG---EQPAPCAPTSPSRPGAPGSFVASM 542 SR T + P +SG PAP APTSP P P + + Sbjct: 348 PSREASRPPEEPSAPSPTLPTQFKQRAPMYNSGLSPATPAPAAPTSPLTPTTPPAVTPTA 407 Query: 543 EQPVVGL 563 + P V + Sbjct: 408 QTPPVAM 414
>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)| Length = 2126 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 14/76 (18%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSPSRPGAPGSFVASMEQPVVG--------------LRPNSEWIR 587 PP R S E P P +SP P G A + PV+G L P+ W Sbjct: 1246 PPRRDSTEAPKP--ESSPEPPPGQGRTRAGTQVPVLGPEDDLAGIFLQIFPLSPDPRW-- 1301 Query: 588 SRASQRPLYMSIRAKL 635 +S RPL ++++ L Sbjct: 1302 QSSSPRPLALALQQAL 1317
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSP--SRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQRPLYMSI 623 PPPRS G P P+ P S G G S + G P E + SR R +Y+S Sbjct: 150 PPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSR---RDVYLSP 206 Query: 624 R 626 R Sbjct: 207 R 207
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = +3 Query: 450 PPPRSSGEQPAPCAPTSP--SRPGAPGSFVASMEQPVVGLRPNSEWIRSRASQRPLYMSI 623 PPPRS G P P+ P S G G S + G P E + SR R +Y+S Sbjct: 150 PPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSR---RDVYLSP 206 Query: 624 R 626 R Sbjct: 207 R 207
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)| Length = 251 Score = 25.0 bits (53), Expect(2) = 9.0 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 6/36 (16%) Frame = +2 Query: 566 PQLRVDSKPSKPAPP------VHVDPSQAVCQQPHV 655 P R ++ S P PP +H PS + C++P V Sbjct: 106 PGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVV 141 Score = 23.1 bits (48), Expect(2) = 9.0 Identities = 23/85 (27%), Positives = 25/85 (29%) Frame = +3 Query: 267 SRRSPSSATSGQPRPGPSSPLARFLWCSRLRVCPETTRCREEL*PPSVSSRRTTAWRHSW 446 S SP GQ R P A F R C + +R A R Sbjct: 31 SDHSPGYYAGGQRRESSFQPEAGF---GRRAAC---------------TVQRYAACRDPG 72 Query: 447 EPPPRSSGEQPAPCAPTSPSRPGAP 521 PPP P P SP P P Sbjct: 73 PPPPPPPPPPPPPPPGLSPRAPAPP 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,213,848 Number of Sequences: 219361 Number of extensions: 2552677 Number of successful extensions: 18343 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 11614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17858 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
