>SNWA_DICDI (P54705) Protein snwA|
          Length = 685

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 696 PSEVKPDEEQCTLYTPKIKPDKLKTRSDRGEES*QKQREPEPRACNRQG 550
           P  V  +EE+  L+ PK KP + K +  + +E   K ++  P   NR+G
Sbjct: 11  PKNVYSNEEEDPLFQPKPKPQQQKQQQQQQQELNDKPKKVIPTYGNRKG 59

>PRKDC_MOUSE (P97313) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs) (P460)
          Length = 4128

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = -3

Query: 663  TLYTP-----KIKPDKLKTRSDRGEES*QKQREPEPRACNRQGGSTG*IPSVQRSSDGNF 499
            T+ TP     +  P  L T++  G  S Q+Q+  + RA  +Q   T    SV+RSS   F
Sbjct: 2596 TVLTPMFIETQASPSILHTQTQEGPLSDQRQKPGQVRATQQQYDFTPTQASVERSS---F 2652

Query: 498  CWLTSAT 478
             WLT ++
Sbjct: 2653 DWLTGSS 2659

>KR2_HHV11 (P04290) Probable serine/threonine-protein kinase (EC 2.7.11.1)|
           (Virion protein VMW57)
          Length = 518

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 33  PPSRGERSRPPLRRAAAVLTPPPT 104
           P +  + +RPPLRR+ A LT PP+
Sbjct: 95  PGTAAKLNRPPLRRSQAALTAPPS 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,127,294
Number of Sequences: 219361
Number of extensions: 1989853
Number of successful extensions: 5701
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5694
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)