Clone Information

BLAST Search Result

Clone Name	basd11m21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (At...	120	3e-27
2	VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (At...	117	2e-26
3	VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protei...	111	1e-24
4	VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (At...	110	2e-24
5	VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (At...	103	4e-22
6	VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (At...	95	2e-19
7	VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (At...	75	2e-13
8	VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (At...	70	6e-12
9	VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (At...	68	2e-11
10	VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (At...	66	8e-11
11	VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (At...	60	4e-09
12	SYB1_SCHPO (Q92356) Synaptobrevin homolog 1	60	6e-09
13	SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1	57	4e-08
14	SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insen...	57	4e-08
15	VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)	56	9e-08
16	VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)	56	9e-08
17	VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)	55	1e-07
18	VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP...	55	1e-07
19	VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP...	55	1e-07
20	VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8...	54	3e-07
21	NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synapt...	54	3e-07
22	SYB_APLCA (P35589) Synaptobrevin	53	6e-07
23	SNC1_YEAST (P31109) Synaptobrevin homolog 1	52	2e-06
24	SYB_DROME (P18489) Synaptobrevin	52	2e-06
25	VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP...	50	6e-06
26	VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2...	50	6e-06
27	VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP...	50	6e-06
28	VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP...	50	6e-06
29	VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP...	50	6e-06
30	VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP...	50	6e-06
31	SNC2_YEAST (P33328) Synaptobrevin homolog 2	50	6e-06
32	VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP...	49	8e-06
33	SYB_LOLPE (P47194) Synaptobrevin	49	1e-05
34	VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP...	48	2e-05
35	SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated in...	48	2e-05
36	VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1...	47	5e-05
37	VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3...	47	5e-05
38	VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP...	47	5e-05
39	VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP...	47	5e-05
40	SYBL_SCHMA (Q27236) Synaptobrevin-like protein	44	3e-04
41	YKT6_ASHGO (Q757A4) Synaptobrevin homolog YKT6	42	0.002
42	YKT6_DEBHA (Q6BSL0) Synaptobrevin homolog YKT6	41	0.002
43	YKT6_CANGA (Q6FW27) Synaptobrevin homolog YKT6	41	0.003
44	YKT6_YEAST (P36015) Synaptobrevin homolog YKT6	41	0.003
45	YKT6_KLULA (Q6CSA2) Synaptobrevin homolog YKT6	40	0.006
46	YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6	39	0.008
47	SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.011
48	SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.011
49	SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.011
50	YKT6_YARLI (Q6C537) Synaptobrevin homolog YKT6	39	0.014
51	SEC22_YARLI (Q6C880) Protein transport protein SEC22	36	0.071
52	VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP...	34	0.27
53	SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22	34	0.27
54	SEC22_KLULA (Q6CJA0) Protein transport protein SEC22	34	0.27
55	SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22	33	0.46
56	SEC22_CANGA (Q6FWT0) Protein transport protein SEC22	33	0.60
57	SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)	32	1.0
58	RAD52_MAGGR (Q8NK72) DNA repair and recombination protein rhm52 ...	32	1.3
59	MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Mo...	32	1.8
60	MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)	31	3.0
61	LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase...	30	3.9
62	PAK1_MOUSE (O88643) Serine/threonine-protein kinase PAK 1 (EC 2....	30	5.1
63	PPZ2_YEAST (P33329) Serine/threonine-protein phosphatase PP-Z2 (...	30	6.7
64	PSA1_DROME (P12881) Proteasome subunit alpha type 1 (EC 3.4.25.1...	30	6.7
65	PPR1_YEAST (P07272) Pyrimidine pathway regulatory protein 1	30	6.7
66	COX1_THET8 (Q5SJ79) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) ...	30	6.7
67	RK29_ARATH (Q9FJP3) 50S ribosomal protein L29, chloroplast precu...	29	8.7
68	PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2	29	8.7
69	PAK1_HUMAN (Q13153) Serine/threonine-protein kinase PAK 1 (EC 2....	29	8.7

>VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtVAMP722)|
           (Synaptobrevin-related protein 1)
          Length = 221

 Score =  120 bits (301), Expect = 3e-27
 Identities = 61/87 (70%), Positives = 64/87 (73%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQVSEVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGTQ+RRKMW QNM  
Sbjct: 135 KAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKI 194

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNCGK 268
                            S+C GFNCGK
Sbjct: 195 KLIVLAIIIALILIIILSICGGFNCGK 221

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>VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtVAMP721)|
           (v-SNARE synaptobrevin 7B) (AtVAMP7B)
          Length = 219

 Score =  117 bits (293), Expect = 2e-26
 Identities = 60/85 (70%), Positives = 62/85 (72%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQVSEVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR  GTQ+RRKMWLQNM  
Sbjct: 135 KAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKI 194

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNC 262
                            SVCHGF C
Sbjct: 195 KLIVLAIIIALILIIVLSVCHGFKC 219

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>VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein 726|
           (AtVAMP726)
          Length = 220

 Score =  111 bits (278), Expect = 1e-24
 Identities = 55/85 (64%), Positives = 62/85 (72%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQV+EVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGT+++RK+W +NM  
Sbjct: 135 KAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKI 194

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNC 262
                            SVCHGF C
Sbjct: 195 KLIVFGIIVALILIIILSVCHGFKC 219

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>VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtVAMP725)|
          Length = 285

 Score =  110 bits (276), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 61/85 (71%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQV+EVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGT++RRKMW +NM  
Sbjct: 200 KAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKI 259

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNC 262
                            SVC GF C
Sbjct: 260 KLIVLGIIITLILIIILSVCGGFKC 284

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>VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (AtVAMP724)|
           (SYBL1-like protein)
          Length = 222

 Score =  103 bits (257), Expect = 4e-22
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQVSEVK++M+ENI+K +DRGE + +L DKTENLRSQAQ++++QGTQVRRK+W QNM  
Sbjct: 136 KAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKI 195

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNC 262
                            SVCHGFNC
Sbjct: 196 KLVVLGILLLLVLIIWISVCHGFNC 220

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>VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (AtVAMP727)|
          Length = 240

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 46/85 (54%), Positives = 57/85 (67%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQ++EVK +MM+NIEKVLDRGEKIELLVDKTENL+ QA  F++QG Q+RRKMWLQ++  
Sbjct: 154 KAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQM 213

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNC 262
                              C GF C
Sbjct: 214 KLMVAGAVFSFILIVWVVACGGFKC 238

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>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)|
          Length = 221

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 36/84 (42%), Positives = 51/84 (60%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           R + ++S+V+NVM+ENI+KVLDRGE++ELLVDKTEN++     FR+Q  + R  MW +N+
Sbjct: 130 RIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNV 189

Query: 182 XXXXXXXXXXXXXXXXXXXSVCHG 253
                               VCHG
Sbjct: 190 KLTIALILVLALVVYIAMAFVCHG 213

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>VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtVAMP723)|
          Length = 217

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQVSEVK++MMENIEKVL RG   E+L     +  SQ Q F  + TQ++RK W QNM  
Sbjct: 135 KAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKI 190

Query: 188 XXXXXXXXXXXXXXXXXSVCHGFNCGK 268
                            SVC GFNCGK
Sbjct: 191 KLIVLAIIIALILIIILSVCGGFNCGK 217

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>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)|
          Length = 221

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 28/59 (47%), Positives = 47/59 (79%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           R   +VSE+++VM+ENIEK+++RG++IELLVDKT  ++  +  FR+Q  ++RR +W++N
Sbjct: 130 RVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188

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>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)|
           (v-SNARE synaptobrevin 7C) (AtVAMP7C)
          Length = 219

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           R + ++++V+ VM+ENI+KVLDRGE++ELLVDKT N++     FR+Q  + R  +W +N 
Sbjct: 129 RIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNC 188

Query: 182 XXXXXXXXXXXXXXXXXXXSVCHG 253
                               +CHG
Sbjct: 189 KLTVLLILLLLVIIYIAVAFLCHG 212

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>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)|
          Length = 219

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 28/84 (33%), Positives = 46/84 (54%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           R + ++++V++VM+ENI+ +LDRGE++ELLVDKT N++     FR+Q  +    +W +N 
Sbjct: 129 RIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNC 188

Query: 182 XXXXXXXXXXXXXXXXXXXSVCHG 253
                                CHG
Sbjct: 189 KLTLLLILVLLVIIYIGVAFACHG 212

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>SYB1_SCHPO (Q92356) Synaptobrevin homolog 1|
          Length = 121

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           + Q+ +   +M ENI KV +RGE+++ L DKT+NL   AQ FR+   +VR+KMW ++M
Sbjct: 36  QQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWWKDM 93

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>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1|
          Length = 219

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 28/83 (33%), Positives = 43/83 (51%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQV E+K +M+ NI+ V  RGE++ELL+DKTENL   +  F+     + R M ++N+  
Sbjct: 129 QAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 188

Query: 188 XXXXXXXXXXXXXXXXXSVCHGF 256
                             +C GF
Sbjct: 189 TIIIIIVSIVFIYIIVSPLCGGF 211

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>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)|
           (Ti-VAMP) (Ti-VAMP/VAMP7)
          Length = 219

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 28/83 (33%), Positives = 43/83 (51%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXX 187
           +AQV E+K +M+ NI+ V  RGE++ELL+DKTENL   +  F+     + R M ++N+  
Sbjct: 129 QAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 188

Query: 188 XXXXXXXXXXXXXXXXXSVCHGF 256
                             +C GF
Sbjct: 189 TIIIIIVSIVFIYIIVSPLCGGF 211

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>VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMW 169
           QV EV +VM ENI KV++RGE+++ L DK+E+L   A  F  +  Q+RR+MW
Sbjct: 59  QVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

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>VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMW 169
           QV EV +VM ENI KV++RGE+++ L DK+E+L   A  F  +  Q+RR+MW
Sbjct: 59  QVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

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>VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)|
          Length = 100

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 23/58 (39%), Positives = 41/58 (70%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +++V  VKN+M +N+E++L RGE +E L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 17  QSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

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>VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 23/58 (39%), Positives = 41/58 (70%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +++V  VKN+M +N+E++L RGE +E L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 17  QSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

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>VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (Edb)
          Length = 101

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 22/58 (37%), Positives = 41/58 (70%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +++V  VKN+M +N+E++L RGE ++ L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 17  QSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

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>VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 22/58 (37%), Positives = 41/58 (70%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +++V  VKN+M +N+E++L RGE ++ L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 16  QSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 73

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>NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synaptobrevin NYV1)|
           (New v-SNARE 1)
          Length = 251

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 23/58 (39%), Positives = 37/58 (63%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           E Q+ +V  +M +NI+K L+R E++ LLVDKT  L S +  FR++   ++  MW Q +
Sbjct: 170 EDQIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQKV 227

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>SYB_APLCA (P35589) Synaptobrevin|
          Length = 180

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 25/57 (43%), Positives = 37/57 (64%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV ++M  N+EKVLDR +KI  L D+ E L++ A  F     +++RK W +N
Sbjct: 26  QAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKRKYWWKN 82

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>SNC1_YEAST (P31109) Synaptobrevin homolog 1|
          Length = 117

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 20/58 (34%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +A++ +   +M +NI KV +RGE++  + DK +NL   AQ F++   +VR+ MW +++
Sbjct: 33  QAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKAMWYKDL 90

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>SYB_DROME (P18489) Synaptobrevin|
          Length = 152

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +A+V EV  +M  N+EKVL+R +K+  L ++ + L   A  F QQ  +++RK W  NM
Sbjct: 52  QAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANM 109

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>VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2) (SYBII)
          Length = 113

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R  K+  L D+ + L++ A  F     +++RK W +NM
Sbjct: 33  QAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWWKNM 90

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>VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 35  QAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

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>VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 35  QAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

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>VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 35  QAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

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>VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 35  QAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

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>VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 38/58 (65%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 35  QAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

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>SNC2_YEAST (P33328) Synaptobrevin homolog 2|
          Length = 115

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 19/56 (33%), Positives = 37/56 (66%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           ++ +   +M +NI KV +RGE++  + DK +NL   AQ F++   +VR++MW +++
Sbjct: 34  EIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRVRKQMWWKDL 89

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>VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 38  QAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 94

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>SYB_LOLPE (P47194) Synaptobrevin|
          Length = 125

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV ++M  N++KVL+R  KI  L D+ + L++ A  F     +++RK W +N
Sbjct: 45  QAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWWKN 101

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>VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 20/57 (35%), Positives = 37/57 (64%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 38  QAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 94

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>SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated integral|
           membrane protein) (VAMP-1)
          Length = 120

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 20/57 (35%), Positives = 37/57 (64%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 40  QAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 96

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>VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/57 (35%), Positives = 37/57 (64%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 38  QAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWWKN 94

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>VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 25  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 79

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>VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 25  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 79

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>VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 99

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 20  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 74

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>SYBL_SCHMA (Q27236) Synaptobrevin-like protein|
          Length = 131

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 36/57 (63%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 178
           +AQV+EV ++M  N++KVL+R + +  L  + + L++ A  F     +++RK W +N
Sbjct: 23  QAQVNEVVDIMRVNVDKVLERDKNLSELDGRADALQAGASQFEASAGKLKRKFWWKN 79

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>YKT6_ASHGO (Q757A4) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 20/47 (42%), Positives = 33/47 (70%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           R + ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 143 RVQQELDETKIVLHKTIESVLQRGEKLDNLVDKSESLSASSRMFYKQ 189

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>YKT6_DEBHA (Q6BSL0) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           + ++ E K V+ + IE VL RGEK++ LVDK+E L S ++ F +Q
Sbjct: 145 QQELDETKIVLHKTIESVLQRGEKLDSLVDKSEALSSSSRMFYKQ 189

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>YKT6_CANGA (Q6FW27) Synaptobrevin homolog YKT6|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           + ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 150 QQELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQ 194

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>YKT6_YEAST (P36015) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = +2

Query: 8   EAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           + ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 145 QQELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQ 189

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>YKT6_KLULA (Q6CSA2) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           R + ++ E K  + + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 143 RVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQ 189

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>YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6|
          Length = 197

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 17/44 (38%), Positives = 32/44 (72%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 133
           R + ++ E K+V+ + IE VL RGEK++ L+ +++NL +Q++ F
Sbjct: 140 RVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMF 183

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>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 139
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

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>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 139
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

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>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 139
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

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>YKT6_YARLI (Q6C537) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 142
           R + ++ E K V+ + IE VL RGE+++ LVDK+E L   ++ F +Q
Sbjct: 143 RVQQELDETKIVLHKTIESVLARGERLDTLVDKSEALSQSSKIFFKQ 189

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>SEC22_YARLI (Q6C880) Protein transport protein SEC22|
          Length = 213

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 14/47 (29%), Positives = 31/47 (65%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 154
           ++ +V  VM +NIE +L RG  ++ + D + NLR++++ +R+   ++
Sbjct: 139 ELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQRI 185

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>VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP-5) (Myobrevin)|
          Length = 116

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 181
           R + Q +EV  +M  N  KVL+RG K+  L  +++ L   +  F +    + +K   +N+
Sbjct: 8   RCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENI 67

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>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +2

Query: 14  QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVR-RKMWLQ 175
           ++ +V  VM +NIE +L RG+ +E + D + +LR  +  +++   +V    +W Q
Sbjct: 134 ELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEALWRQ 188

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>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22|
          Length = 214

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +2

Query: 26  VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 154
           VK +M +NIE +L RG+ ++ + D + +LR  A+ +R    ++
Sbjct: 143 VKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKYRASAQKI 185

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>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22|
          Length = 214

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 13/43 (30%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 154
           VK +M +NIE +L RG+ ++ + D + +LR  ++ +R+   ++
Sbjct: 143 VKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKYRRSAQKI 185

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>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 13/43 (30%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 154
           VK +M +NIE +L RG+ +E + D + +L+  ++ +R+   ++
Sbjct: 144 VKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKYRKSAQKI 186

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>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)|
          Length = 214

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 154
           VK +M +NIE +L RG+ ++ + D + +L+  ++ +R+   ++
Sbjct: 143 VKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKI 185

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>RAD52_MAGGR (Q8NK72) DNA repair and recombination protein rhm52 (RAD52 homolog)|
          Length = 565

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -2

Query: 478 PSHHPSNDKRTAQHNDDDNGNGPPQAPRPGPAHTREERTLGTIYGFCSNQQSNIG 314
           PS + SN +R  Q +   N NGP   P+P   + +  R+ G   G  +NQQ+N G
Sbjct: 292 PSGNQSNQQRPMQPSSRMNLNGPAGRPQPQTPNHQINRS-GPQNGSINNQQNNHG 345

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>MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Modulator of|
           transcription protein 3) (Hypoxic gene repressor protein
           7)
          Length = 490

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
 Frame = -2

Query: 565 YYSSSCNNRTKVSRSKLYIHSVQKYTTRWPSHHPSNDK-RTAQHNDDDNGNGPPQAPRPG 389
           YYS    N     + + Y+ +   Y + + S   SN+    A +N  +N +    AP PG
Sbjct: 178 YYSFPTANMPIPQQDQQYMFNPASYISHYYSAVNSNNNGNNAANNGSNNSSHSAPAPAPG 237

Query: 388 PAHTREERTLGTIYGFCSNQQSNIGTVECVSRPQ 287
           P H          +    N  +N G V   + PQ
Sbjct: 238 PPHHHHH------HSNTHNNLNNGGAVNTNNAPQ 265

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>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)|
          Length = 1324

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 583 FFFK*IYYSSSCNNRTKVSRSKLYIHSVQKYTTRWPSHHPSNDKRTAQHNDDDNGNGPPQ 404
           FF K    SSS +     S S            + PS  PS  K+T + N + + N P +
Sbjct: 24  FFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKKTPKLNPNPSSNLPAR 83

Query: 403 APRPGP 386
           +P PGP
Sbjct: 84  SPSPGP 89

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>LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein-binding protein 1)
           (PTPRF-interacting protein-binding protein 1) (hSGT2)
          Length = 1011

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
 Frame = -2

Query: 457 DKRTAQHND---------DDNGNGPPQAPRPGPAHTREERTLGTIYGFCSNQQSNIGTVE 305
           +K TA+H D         D   N P Q P P P   ++ R +  ++G     QS     +
Sbjct: 548 EKETAEHLDLAGASSRPKDSQRNSPFQIPPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPD 607

Query: 304 CVSRPQ 287
            +S P+
Sbjct: 608 DMSEPE 613

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>PAK1_MOUSE (O88643) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)|
           (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK)
           (CDC42/RAC effector kinase PAK-A)
          Length = 545

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
 Frame = -2

Query: 544 NRTKVSRSKLYIHSVQKYTTRWPSHHPSNDKRTAQ----------HNDDDNGNGPPQAPR 395
           N  K S SK Y+    K    + S +  N K  ++            DDD+   PP    
Sbjct: 132 NSKKTSNSKKYMSFTDKSAEDYNSSNTLNVKTVSETPAVPPVSEDDEDDDDDATPPPVIA 191

Query: 394 PGPAHTREERTLGTI 350
           P P HT+   T   I
Sbjct: 192 PRPEHTKSVYTRSVI 206

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>PPZ2_YEAST (P33329) Serine/threonine-protein phosphatase PP-Z2 (EC 3.1.3.16)|
          Length = 709

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -2

Query: 565 YYSSSCNNRTKVSRSKLYIHSVQKYTTRWPSHHPSNDKRTAQHNDD--DNGNGPPQAPRP 392
           Y+S+  N+     +S         Y+T  P H P+  K +++ NDD  DN NG   +P P
Sbjct: 244 YFSNRSNSHASSRKSSFGSTGNTAYST--PLHSPALRKMSSRDNDDSGDNVNGRGTSPIP 301

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>PSA1_DROME (P12881) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome|
           35 kDa subunit) (PROS-Dm35)
          Length = 279

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 460 NDKRTAQHNDDDNGNGPPQAPRPGP 386
           ND  T +++DDD+   PP+ P  GP
Sbjct: 242 NDNDTPRNDDDDDRPSPPEEPAAGP 266

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>PPR1_YEAST (P07272) Pyrimidine pathway regulatory protein 1|
          Length = 904

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -3

Query: 306 NVSHDLRVCPHLDLPQLNPWHTDRIMMRMSATMMPRTISLIFMFCSHIFLLTCVPCCLKS 127
           NV+  + VC  +D+P  + W T + +       +P    + + F + IF +      LKS
Sbjct: 353 NVTEKIDVCSSVDVPWYDTWETSQKVNMRPIVELPTKFHIPYFFLNIIFAIGHATQVLKS 412

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>COX1_THET8 (Q5SJ79) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
           (Cytochrome cba3 subunit 1)
          Length = 562

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 468 WWLGQRVVYFWTLCMYSL 521
           WW G  +VYFW L  Y++
Sbjct: 229 WWTGHPIVYFWLLPAYAI 246

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>RK29_ARATH (Q9FJP3) 50S ribosomal protein L29, chloroplast precursor|
          Length = 173

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +2

Query: 2   RHEAQVSEVKNVMMENI-EKVLD-RGEKIELLVDKTENLRSQAQDFRQQGTQVRRKM 166
           + EA++ E+++   E + E+V+D +GE   L + K+     ++ DFR+   QV R +
Sbjct: 62  KREAELKEIRSKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARML 118

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>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2|
          Length = 691

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 478 PSHHPSNDKRTAQHNDDDNGNGPPQAPRPGPAHT 377
           P  HP N  +  Q +     + PPQ P P P H+
Sbjct: 251 PHSHPQNQTQN-QPSPTQQSSSPPQKPSPSPGHS 283

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>PAK1_HUMAN (Q13153) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)|
           (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK)
          Length = 545

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
 Frame = -2

Query: 544 NRTKVSRSKLYIHSVQKYTTRWPSHHPSNDKRTAQ----------HNDDDNGNGPPQAPR 395
           N  K S S+ Y+    K    + S +  N K  ++           +DDD+   PP    
Sbjct: 132 NSKKTSNSQKYMSFTDKSAEDYNSSNALNVKAVSETPAVPPVSEDEDDDDDDATPPPVIA 191

Query: 394 PGPAHTREERTLGTI 350
           P P HT+   T   I
Sbjct: 192 PRPEHTKSVYTRSVI 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,579,187
Number of Sequences: 219361
Number of extensions: 1399544
Number of successful extensions: 5463
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 5031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5437
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result