Clone Information

BLAST Search Result

Clone Name	basd12b13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	414	e-115
2	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	373	e-103
3	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	340	3e-93
4	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	328	9e-90
5	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	290	3e-78
6	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	288	8e-78
7	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	288	8e-78
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	285	9e-77
9	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	281	2e-75
10	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	280	4e-75
11	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	278	9e-75
12	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	278	1e-74
13	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	278	1e-74
14	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	277	2e-74
15	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	275	9e-74
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	200	3e-51
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	122	1e-27
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	122	1e-27
19	KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	33	0.82
20	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	32	1.4
21	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	32	1.8
22	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	32	1.8
23	KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	32	1.8
24	G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	32	1.8
25	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	32	1.8
26	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	32	1.8
27	PTR2_CANAL (P46030) Peptide transporter PTR2	31	3.1
28	PCRB_SULAC (Q4JAS3) Protein pcrB homolog	31	3.1
29	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	31	3.1
30	KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	3.1
31	KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	3.1
32	CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Casto...	31	3.1
33	RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae	31	3.1
34	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	31	4.1
35	RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2...	31	4.1
36	TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1...	30	5.3
37	ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl trans...	30	5.3
38	CDCH_HALSA (Q9HPF0) Protein cdcH	30	5.3
39	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	30	6.9
40	COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	6.9
41	VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG)...	30	6.9
42	ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.9
43	ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.9
44	ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.9
45	PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC ...	30	6.9
46	DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)	30	9.1
47	KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ...	30	9.1
48	KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr...	30	9.1

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  414 bits (1063), Expect = e-115
 Identities = 206/207 (99%), Positives = 206/207 (99%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 251
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 252 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 431
           WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120

Query: 432 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 611
           FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS
Sbjct: 121 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 180

Query: 612 AGELESGNAGEPAKLIRQRYREAADMI 692
           AGELESGNAGEPAKLIRQRYREAADMI
Sbjct: 181 AGELESGNAGEPAKLIRQRYREAADMI 207

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  373 bits (958), Expect = e-103
 Identities = 189/209 (90%), Positives = 197/209 (94%), Gaps = 2/209 (0%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 248
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 249 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 425
            +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119

Query: 426 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 605
           GGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM
Sbjct: 120 GGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 179

Query: 606 MSAGELESGNAGEPAKLIRQRYREAADMI 692
           MSAGELESGN GEPAKLIRQRYREAAD+I
Sbjct: 180 MSAGELESGN-GEPAKLIRQRYREAADII 207

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  340 bits (871), Expect = 3e-93
 Identities = 173/213 (81%), Positives = 190/213 (89%), Gaps = 6/213 (2%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 239
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 240 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 413
            TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 414 DNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 593
           DN M GFYIA  FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI
Sbjct: 121 DNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180

Query: 594 NPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
            PIMMSAGELESGNAGEPAKLIRQRYREA+D+I
Sbjct: 181 TPIMMSAGELESGNAGEPAKLIRQRYREASDLI 213

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  328 bits (841), Expect = 9e-90
 Identities = 170/211 (80%), Positives = 185/211 (87%), Gaps = 4/211 (1%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 245
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 246 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 419
           D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114

Query: 420 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 599
           TM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINP
Sbjct: 115 TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 174

Query: 600 IMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           IMMSAGELESGN GEPAKLIRQRYREAAD+I
Sbjct: 175 IMMSAGELESGN-GEPAKLIRQRYREAADII 204

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  290 bits (742), Expect = 3e-78
 Identities = 152/229 (66%), Positives = 175/229 (76%)
 Frame = +3

Query: 6   ARGTSTAARIHRC*QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKS 185
           A   ST   I+R      +   +  + S  V APAST   FLGKK    V +   +   +
Sbjct: 2   AAAVSTVGAINR------APLSLNGSGSGAVSAPAST---FLGKK----VVTVSRFAQSN 48

Query: 186 SKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAV 365
            K+N    + A   D++ + D+W+GLAYD SDDQQDITRGKG+VDS+FQAP G GTH AV
Sbjct: 49  KKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAV 108

Query: 366 LSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKG 545
           LSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILGIWGGKG
Sbjct: 109 LSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKG 168

Query: 546 QGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           QGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 169 QGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI 217

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  288 bits (738), Expect = 8e-78
 Identities = 148/218 (67%), Positives = 173/218 (79%), Gaps = 11/218 (5%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 221
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 222 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 398
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 399 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 578
           R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 579 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 180 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 217

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  288 bits (738), Expect = 8e-78
 Identities = 148/218 (67%), Positives = 173/218 (79%), Gaps = 11/218 (5%)
 Frame = +3

Query: 72  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 221
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 222 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 398
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 399 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 578
           R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 579 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 180 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 217

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  285 bits (729), Expect = 9e-77
 Identities = 145/204 (71%), Positives = 167/204 (81%), Gaps = 2/204 (0%)
 Frame = +3

Query: 87  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 260
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 261 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 440
           LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133

Query: 441 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 620
           APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE
Sbjct: 134 APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193

Query: 621 LESGNAGEPAKLIRQRYREAADMI 692
           LESGNAGEPAKLIRQRYREAAD+I
Sbjct: 194 LESGNAGEPAKLIRQRYREAADII 217

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  281 bits (718), Expect = 2e-75
 Identities = 147/217 (67%), Positives = 166/217 (76%), Gaps = 16/217 (7%)
 Frame = +3

Query: 90  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 227
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 228 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 401
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 402 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 581
           +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF 
Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184

Query: 582 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEII 221

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  280 bits (715), Expect = 4e-75
 Identities = 141/201 (70%), Positives = 168/201 (83%), Gaps = 3/201 (1%)
 Frame = +3

Query: 99  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 269
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 270 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 449
           D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPA
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140

Query: 450 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 629
           F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200

Query: 630 GNAGEPAKLIRQRYREAADMI 692
           GNAGEPAKLIRQRYREA+D+I
Sbjct: 201 GNAGEPAKLIRQRYREASDLI 221

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  278 bits (712), Expect = 9e-75
 Identities = 147/201 (73%), Positives = 164/201 (81%), Gaps = 3/201 (1%)
 Frame = +3

Query: 99  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 269
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 270 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 449
           DISDDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+   DN   GFYIAPA
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138

Query: 450 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 629
           F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 198

Query: 630 GNAGEPAKLIRQRYREAADMI 692
           GNAGEPAKLIRQRYREAAD+I
Sbjct: 199 GNAGEPAKLIRQRYREAADLI 219

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  278 bits (711), Expect = 1e-74
 Identities = 142/208 (68%), Positives = 164/208 (78%), Gaps = 4/208 (1%)
 Frame = +3

Query: 81  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 248
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 249 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 428
           +WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ 
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133

Query: 429 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 608
           GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMM
Sbjct: 134 GFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMM 193

Query: 609 SAGELESGNAGEPAKLIRQRYREAADMI 692
           SAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 194 SAGELESGNAGEPAKLIRQRYREAAEII 221

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  278 bits (710), Expect = 1e-74
 Identities = 144/198 (72%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
 Frame = +3

Query: 102 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 278
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 279 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 458
           DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G FYIAPAFMD
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137

Query: 459 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 638
           KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA
Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 197

Query: 639 GEPAKLIRQRYREAADMI 692
           GEPAKLIRQRYREAAD+I
Sbjct: 198 GEPAKLIRQRYREAADLI 215

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  277 bits (708), Expect = 2e-74
 Identities = 143/219 (65%), Positives = 165/219 (75%), Gaps = 14/219 (6%)
 Frame = +3

Query: 78  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 215
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 216 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 395
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 396 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 575
           LR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 116 LRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 175

Query: 576 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 176 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 214

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  275 bits (703), Expect = 9e-74
 Identities = 141/219 (64%), Positives = 164/219 (74%), Gaps = 14/219 (6%)
 Frame = +3

Query: 78  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 215
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 216 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 395
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ 
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 396 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 575
           L+ Y  DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 118 LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 177

Query: 576 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           F KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 178 FRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEII 216

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  200 bits (509), Expect = 3e-51
 Identities = 99/156 (63%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
 Frame = +3

Query: 234 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 404
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 405 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 584
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

Query: 585 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 692
           +GI PI+MSAGELESGNAGEPAKLIR RYREA+D+I
Sbjct: 155 LGIAPIVMSAGELESGNAGEPAKLIRTRYREASDII 190

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  122 bits (306), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = +3

Query: 432 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 611
           +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62

Query: 612 AGELESGNAGEPAKLIRQRYREAADMI 692
            GELES +AG+PA+LIR RYRE A++I
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELI 89

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  122 bits (305), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = +3

Query: 432 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 611
           +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62

Query: 612 AGELESGNAGEPAKLIRQRYREAADMI 692
            GELES +AG+PA+LIR RYRE A++I
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELI 89

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>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 198

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +3

Query: 519 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 689
           I+ I GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69

Query: 690 I 692
           +
Sbjct: 70  V 70

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 501 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 680
           NIK P  + ++G  G GK+   + V  +   N I +   EL S   GE  K +R+ +R+A
Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 464  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 628
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985

Query: 629  -WERWRASQAHQAAVP*G 679
             W R R      A  P G
Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003

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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +3

Query: 504 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 683
           IK P  + ++G  G GK+     V A +G+N + + +  +     GE A++IR+ +  A 
Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAK 222

Query: 684 D 686
           +
Sbjct: 223 E 223

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>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 193

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +3

Query: 519 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 689
           I+ + GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65

Query: 690 I 692
           +
Sbjct: 66  V 66

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>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 548

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 381 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 560
           Y SQ +  YD    M   Y+    M+    H++    T+P   +P+I G+ G  GQ   +
Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387

Query: 561 QC 566
           QC
Sbjct: 388 QC 389

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>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 464  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 628
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984

Query: 629  -WERWRASQAHQAAVP*G 679
             W R R      A  P G
Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 464  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 628
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209

Query: 629  -WERWRASQAHQAAVP*G 679
             W R R      A  P G
Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227

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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -3

Query: 349 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 203
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 437 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 261
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +3

Query: 504 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 683
           +K P  L ++G  G GK+     V  +   + I++S   +   +AGE  K++R+ + EA+
Sbjct: 53  LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112

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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 513 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 623
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 513 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 623
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 3   SARGTSTAARIHRC*QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 155
           SA  +  ++ +++  QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 37  SANSSLLSSLMNKMSQGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

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>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +3

Query: 102 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 281
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 282 D--QQDITRGKGIVDSLFQAPTGDG 350
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

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>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 528 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 686
           ++G  G GKS+  + V  + G     +S+ +L S   GE  +L+RQ +  A +
Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMARE 219

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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 683 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 558
           C+L+ P+P   G L+ + TL L+G H  G +   LG+ K  ++
Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336

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>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 26/95 (27%), Positives = 42/95 (44%)
 Frame = -2

Query: 542 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 363
           L    T++E    +  G ++ G  +  L       +E   G  E + P+A  DVL+ AE 
Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212

Query: 362 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 258
           G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246

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>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 294 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 464
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121

Query: 465 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 551
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 492 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 671
           T   ++ P  + ++G  G GK+   + V  +   N I +   +L S   GE  K IRQ +
Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548

Query: 672 REA 680
           R+A
Sbjct: 549 RKA 551

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>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 534 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 686
           G  G GK+   + V ++   + I M+  EL     GE AKL+R  ++ A D
Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD 240

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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 507 KIPLILGIWGGKGQGKSFQCELVFAKMG 590
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30

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>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 592 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 455
           M I++ TSS W   P PL PPQ+P +   ++  R  +   + T S S
Sbjct: 49  MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94

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>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 294 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 464
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121

Query: 465 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 551
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 294 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 464
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 465 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 551
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 294 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 464
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 465 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 551
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -2

Query: 509 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 345
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233

Query: 344 ARGRLEERVHDALPSGDVLLVVG 276
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1060

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = +3

Query: 168  NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 347
            N+H K +      + A +  D  R       LAY+++D    +       D +F A +G 
Sbjct: 807  NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858

Query: 348  GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 506
            G   HEA     E  S+   KYDF+  + G  + P  +  L      NF  L  +
Sbjct: 859  GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907

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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 483 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 623
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54

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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 513 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 623
           PL + I G    GK  QCEL+  K G+  + +SAG+L
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,464,736
Number of Sequences: 219361
Number of extensions: 2074202
Number of successful extensions: 7144
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7129
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result