>IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic acid-induced|
           protein 6)
          Length = 335

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 65/153 (42%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
 Frame = +3

Query: 81  MGENSMEREAMP-RLLDLIPDEKEWSLRGGAPGHGGSENTGFGSXXXXXXXXXXXXXXXX 257
           M E S +RE +P +LLDLIPDEKEW LR  A G G S N GF                  
Sbjct: 1   MEEGSNKREGLPPQLLDLIPDEKEWKLRE-ALGLGRSRNAGFDGEEDKKLDLKLGLPGFI 59

Query: 258 XXXPAASSRDNRVVHQESPALSLGYHP-HKHSTANPTTTTGAKRGFLDTVEAKAQGHXXX 434
               A + RD R+  QESP+LSL + P H  +T++ TTTTGAKRGF+DTVE K +G+   
Sbjct: 60  EDDEAETLRDYRL-QQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVEDKTEGY--N 116

Query: 435 XXXXXXXXXCGKXXXXXXXXXXXXXXXRKKGCC 533
                    CGK               RKKGCC
Sbjct: 117 DQKQQARAGCGK--ELAVEEMIAAVSERKKGCC 147

>IAA18_ORYSA (Q5W670) Auxin-responsive protein IAA18 (Indoleacetic acid-induced|
           protein 18)
          Length = 327

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 45/153 (29%), Positives = 57/153 (37%), Gaps = 2/153 (1%)
 Frame = +3

Query: 81  MGENSMEREAMPRLLDLIPDEKEWSLRGGAPGHGGSENTGFGSXXXXXXXXXXXXXXXXX 260
           M E   ++   P LL LIPD +EW ++  A G G S NT   +                 
Sbjct: 1   MEEEFKDKGLPPTLLHLIPDGREWKVKE-ADGEG-SRNTNLDADEDKELELKLGLPGVQQ 58

Query: 261 XXPAASSRDN--RVVHQESPALSLGYHPHKHSTANPTTTTGAKRGFLDTVEAKAQGHXXX 434
              AA SR+   +   + S   S+G  P          TTGAKRGF   V A  +G+   
Sbjct: 59  EERAADSREKIQQQQRESSSEPSIGCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGY--- 115

Query: 435 XXXXXXXXXCGKXXXXXXXXXXXXXXXRKKGCC 533
                    CGK               RKKGCC
Sbjct: 116 NQSHRDTEECGK---ELTLGDENMAGERKKGCC 145

>RS12_STRT2 (Q5M2M4) 30S ribosomal protein S12|
          Length = 137

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 282 RDNRVVHQESPALSLGYHPHKHSTANPTTTTGAKRG 389
           R ++VV  +SPAL++GY+ HK    N   ++  KRG
Sbjct: 12  RQSKVVKSKSPALNVGYNSHKKVQTN--VSSPQKRG 45

>RS12_STRT1 (Q5LY19) 30S ribosomal protein S12|
          Length = 137

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 282 RDNRVVHQESPALSLGYHPHKHSTANPTTTTGAKRG 389
           R ++VV  +SPAL++GY+ HK    N   ++  KRG
Sbjct: 12  RQSKVVKSKSPALNVGYNSHKKVQTN--VSSPQKRG 45

>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101|
          Length = 625

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 279 SRDNRVVHQESPALSLGYHPHKHSTANPTTTTG 377
           S  +   +   PA++LGY PH HS   PT+T G
Sbjct: 437 SSTSNAAYPNLPAVTLGYSPH-HSATAPTSTLG 468


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,244,274
Number of Sequences: 219361
Number of extensions: 1377021
Number of successful extensions: 4730
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4727
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)