ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12b01 |
|---|---|
| Clone Library Name | barley_pub |
>PIGA_HUMAN (P37287) Phosphatidylinositol N-acetylglucosaminyltransferase| subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis, class A protein) (PIG-A) Length = 484 Score = 223 bits (567), Expect = 5e-58 Identities = 99/167 (59%), Positives = 131/167 (78%) Frame = +1 Query: 166 QSRKHRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGGLK 345 ++R H I MVSDFF+PN GGVESHIY LSQCL++ GHKV+++THAYG R G+RY+T GLK Sbjct: 29 RTRTHNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLK 88 Query: 346 VYYVPWRPFLMQNTLPTLFMTFPIIRTILIRERISVVHGHQAFSTLCHEALMHARTMGYK 525 VYY+P + Q+T TLF + P++R I +RER++++H H +FS + H+AL HA+TMG + Sbjct: 89 VYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQ 148 Query: 526 VVFTDHSLYGFADVGSIHMNKVLQFTLADIDQAICVSHTSKENTVLR 666 VFTDHSL+GFADV S+ NK+L +L D + ICVS+TSKENTVLR Sbjct: 149 TVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLR 195
>PIGA_MOUSE (Q64323) N-acetylglucosaminyl-phosphatidylinositol biosynthetic| protein (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis, class A protein) (PIG-A) Length = 485 Score = 222 bits (566), Expect = 7e-58 Identities = 102/169 (60%), Positives = 130/169 (76%) Frame = +1 Query: 160 DGQSRKHRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGG 339 D ++ H I MVSDFF+PN GGVESHIY LSQCL++ GHKV+ +THAYG R GVRY+T G Sbjct: 27 DDRTCTHNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNG 86 Query: 340 LKVYYVPWRPFLMQNTLPTLFMTFPIIRTILIRERISVVHGHQAFSTLCHEALMHARTMG 519 LKVYY+P R Q+T TLF + P++R I +RERI+++H H +FS + H+AL HA+TMG Sbjct: 87 LKVYYLPLRVMYNQSTATTLFHSLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMG 146 Query: 520 YKVVFTDHSLYGFADVGSIHMNKVLQFTLADIDQAICVSHTSKENTVLR 666 + VFTDHSL+GFADV S+ NK+L +L D + ICVS+TSKENTVLR Sbjct: 147 LQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLR 195
>GPI3_YEAST (P32363) Phosphatidylinositol N-acetylglucosaminyltransferase GPI3| subunit (EC 2.4.1.198) (GlcNAc-PI synthesis protein) Length = 461 Score = 203 bits (516), Expect = 4e-52 Identities = 96/173 (55%), Positives = 129/173 (74%) Frame = +1 Query: 148 SHAMDGQSRKHRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRY 327 SH ++ + ++R M+ DFF+P GGVE HIY+LSQ L+ LGH VV++THAY R GVR+ Sbjct: 4 SHKVESYNNENR--MLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRH 61 Query: 328 VTGGLKVYYVPWRPFLMQNTLPTLFMTFPIIRTILIRERISVVHGHQAFSTLCHEALMHA 507 +T GLKVY+VP+ + T PT+F TFPIIR IL+RE+I +VH H + ST HE ++HA Sbjct: 62 LTNGLKVYHVPFFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHA 121 Query: 508 RTMGYKVVFTDHSLYGFADVGSIHMNKVLQFTLADIDQAICVSHTSKENTVLR 666 TMG + VFTDHSLYGF ++ SI +NK+L FTL +ID+ ICVS+T KEN ++R Sbjct: 122 NTMGLRTVFTDHSLYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKENMIVR 174
>YC08_KLEPN (Q48454) Hypothetical 42.6 kDa protein in cps region (ORF8)| Length = 373 Score = 37.4 bits (85), Expect = 0.041 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Frame = +1 Query: 184 ILMVSDFFFP-NFGGVESHIYYLSQCLLKLGHKV-VVMTHAYGKRSGVRYVTGGLKVYYV 357 I++V+ ++P GG E + L++ L++ GH V VV H + +R + G+K+ Y+ Sbjct: 3 IILVNTLYYPYKIGGAEVSVQILAESLIEKGHSVTVVSIHEHNERKDTEH--NGVKIIYL 60 Query: 358 PW 363 P+ Sbjct: 61 PY 62
>FA10_RABIT (O19045) Coagulation factor X precursor (EC 3.4.21.6) (Stuart| factor) [Contains: Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain] Length = 490 Score = 28.9 bits (63), Expect(2) = 0.87 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Frame = -3 Query: 109 CGDVDLGRRRRRKAT---AGPSPSPSPER 32 CG V LGR RR AT GP +P PE+ Sbjct: 172 CGKVTLGRWRRSPATNSSEGPPEAPGPEQ 200 Score = 22.7 bits (47), Expect(2) = 0.87 Identities = 7/13 (53%), Positives = 12/13 (92%) Frame = -1 Query: 138 CDEYMKEEEDAVM 100 CD++ KEEE++V+ Sbjct: 136 CDQFCKEEENSVL 148
>PIMA_MYCTU (O06204) Phosphatidylinositol alpha-mannosyltransferase (EC| 2.4.1.57) Length = 378 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 181 RILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGGLKVYYVP 360 RI M+ + F GGV+SH+ L++ + GH V V+ A + Y G + +P Sbjct: 2 RIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALPDYFVSGGRAVPIP 61 Query: 361 W 363 + Sbjct: 62 Y 62
>PIMA_MYCBO (Q7TY88) Phosphatidylinositol alpha-mannosyltransferase (EC| 2.4.1.57) Length = 378 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 181 RILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGGLKVYYVP 360 RI M+ + F GGV+SH+ L++ + GH V V+ A + Y G + +P Sbjct: 2 RIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALPDYFVSGGRAVPIP 61 Query: 361 W 363 + Sbjct: 62 Y 62
>PIMA_MYCLE (O07147) Phosphatidylinositol alpha-mannosyltransferase (EC| 2.4.1.57) Length = 374 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 181 RILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGGLKVYYVP 360 RI M+ + F GGV+SH+ L++ + G +V V+ A S YV + +P Sbjct: 2 RIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPIP 61 Query: 361 W 363 + Sbjct: 62 Y 62
>VPS68_YEAST (Q12016) Vacuolar protein sorting protein 68| Length = 184 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = +1 Query: 178 HRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGKRSGVRYVTGGLKVYYV 357 H L F P F G+ YLS L LG + + Y + S + V ++ Sbjct: 6 HVSLFRFPFKIPTFRGIRKGGVYLSGALYALGFWIFLDAVLYSRYSN----ASDVHVTFI 61 Query: 358 PWRPFLMQNTLPTLFM 405 W PFL +TL TL + Sbjct: 62 DWIPFLC-STLGTLIV 76
>GUAA_CHRVO (Q7NSG1) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 29.6 bits (65), Expect = 8.5 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 481 LCHEALMHARTMGYKVVFTDHSLYGFADVGSIHMNKVLQFTLADIDQA 624 +C+ A+T+G KV D +G+A + + H +K+L+ ID A Sbjct: 78 ICYGMQFMAQTLGGKVESGDKREFGYAQIKARHHSKLLEGLQDQIDDA 125
>TAM_ECO57 (Q8XAZ2) Trans-aconitate 2-methyltransferase (EC 2.1.1.144)| Length = 251 Score = 29.6 bits (65), Expect = 8.5 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -1 Query: 510 PSMHQRFVAQC*KGLMSMHNRYPLTNKNGPYDWKCHE*CR*CILHQEWPPRHIINLQAT 334 PS++ F A+ + + + R PL N + D C +LHQ WP I + ++ Sbjct: 5 PSLYLHFAAERSRPAVELLARVPLENVDYVADLGCGPGNSTALLHQRWPAARITGIDSS 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,123,723 Number of Sequences: 219361 Number of extensions: 2446483 Number of successful extensions: 7010 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 6671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6991 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
