ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd11l22 |
|---|---|
| Clone Library Name | barley_pub |
>PLCF_PONPY (Q5R6J7) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 61.6 bits (148), Expect = 2e-09 Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 12/163 (7%) Frame = +3 Query: 183 DLLDISPVLTEAAGAIVDDSFTRCFKSNSPEPWNW-----------NIYLFPLWCLGVVI 329 +L DI + I+DD T+ F + E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLI 170 Query: 330 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNKLKSKIERKLVEMMC-SVFVASWTG 506 RY G V +L NG+ K + K V +MC + V + T Sbjct: 171 RYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFK---EFMSKHVHLMCYRICVRALTA 227 Query: 507 VIKYHGPRPSSRPYQVFVANHTSMIDFIILEQMTAFAVIMQKH 635 +I YH R + VANHTS ID IIL +A++ Q H Sbjct: 228 IITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQVH 270
>PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 61.6 bits (148), Expect = 2e-09 Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 12/163 (7%) Frame = +3 Query: 183 DLLDISPVLTEAAGAIVDDSFTRCFKSNSPEPWNW-----------NIYLFPLWCLGVVI 329 +L DI + I+DD T+ F + E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLI 170 Query: 330 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNKLKSKIERKLVEMMC-SVFVASWTG 506 RY G V +L NG+ K + K V +MC + V + T Sbjct: 171 RYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFK---EFMSKHVHLMCYRICVRALTA 227 Query: 507 VIKYHGPRPSSRPYQVFVANHTSMIDFIILEQMTAFAVIMQKH 635 +I YH R + VANHTS ID IIL +A++ Q H Sbjct: 228 IITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQVH 270
>PLCF_MOUSE (Q8K2C8) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 61.2 bits (147), Expect = 2e-09 Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 12/163 (7%) Frame = +3 Query: 183 DLLDISPVLTEAAGAIVDDSFTRCFKSNSPEPWNW-----------NIYLFPLWCLGVVI 329 +L DI + I+DD T+ F + E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTILWGLGVLI 170 Query: 330 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNKLKSKIERKLVEMMC-SVFVASWTG 506 RY G V +L NG+ K + K V +MC + V + T Sbjct: 171 RYCFLLPLRIALAFTGIGLLVVGTTMVGYLPNGRFK---EFLSKHVHLMCYRICVRALTA 227 Query: 507 VIKYHGPRPSSRPYQVFVANHTSMIDFIILEQMTAFAVIMQKH 635 +I YH + R + VANHTS ID IIL +A++ Q H Sbjct: 228 IITYHNRKNRPRNGGICVANHTSPIDVIILASDGYYAMVGQVH 270
>LCNCL_LACLA (Q9CJB8) Lactococcin transport/processing ATP-binding protein| lcnC-like (EC 3.4.22.-) Length = 715 Score = 33.5 bits (75), Expect = 0.54 Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = +3 Query: 402 FPVHFLMNGKNKLKSKIER-----KLVEMMCSVFVASWTGVIKYHGPRPSSRPYQVFVAN 566 +P ++++ G NK I K+ ++ VF++ WTG+ + P PS +P + ++ Sbjct: 94 YPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPTPSYQPTKEKTSS 153 Query: 567 HTSMIDFIILEQMTAFAVIM 626 S I I ++ +++ Sbjct: 154 LLSFIPIITRQKKVILNIVI 173
>RL17_BUCAI (P57565) 50S ribosomal protein L17| Length = 130 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/79 (29%), Positives = 38/79 (48%) Frame = +2 Query: 182 RSSGHLASAHRGSGCHRR*FIHTLLQVKFSGAMELEHLLVPIMVLGSSHKIWTAVSAKVL 361 RSS HL S + C F H +++ S A EL ++ PI+ L KI T +++ Sbjct: 12 RSSTHLNSMLKNMACSL--FTHEVIKTTLSKAKELRRIVEPIITLS---KIDTVSRRRLV 66 Query: 362 NTCTRMDGLLYGLFSRAFP 418 + R + ++ LF + P Sbjct: 67 FSRIRDNAIVAKLFKKLGP 85
>APBA3_MOUSE (O88888) Amyloid beta A4 precursor protein-binding family A member| 3 (Neuron-specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma) Length = 571 Score = 30.8 bits (68), Expect = 3.5 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = +3 Query: 135 PADSLPQEP----PRTLTLRDLLDISPVLTEAAGAIVDDSFTRCFKSNSPEPW 281 PA S+PQ+P PR L + D P E A A DS + S+SPEPW Sbjct: 123 PAQSVPQDPAQTAPRLLQPPEDPDGDPGWMEGASAEPADSRS---SSSSPEPW 172
>YCR6_YEAST (P25353) Hypothetical protein YCR026C| Length = 742 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = +3 Query: 84 WEKMASALDAPNLDDYLPADSLPQEPPRTLTLRDLLDISPVLTEAAGAIVDDSFTRCFKS 263 WE + LD DY+ L + P ++L+D +I+ V +I +D +T Sbjct: 430 WEDL---LDEKLRKDYVSHAYL-EGPMMAISLKDSGNINEVYHNLKTSIDEDKYTVYVNG 485 Query: 264 NSPEPWNWN 290 N P+ WN+N Sbjct: 486 NFPKEWNFN 494
>CLCN3_PONPY (Q5RDJ7) Chloride channel protein 3 (ClC-3)| Length = 801 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 723 SLPAESPRPLKLRSILDMSP 742
>COBT_THET8 (Q7SIC7) Nicotinate-nucleotide--dimethylbenzimidazole| phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) Length = 335 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +3 Query: 111 APNLDDYLPADSLPQEPPR-----TLTLRDLLDISPVLTEAAGAIV 233 AP L D+L A L +EP L LR LLD+ L E GA++ Sbjct: 265 APGLRDHLFAGHLSREPGHRHQLEALGLRPLLDLDLALGEGTGAVL 310
>PIGR_RABIT (P01832) Polymeric-immunoglobulin receptor precursor (Poly-Ig| receptor) (PIGR) [Contains: Secretory component] Length = 773 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 234 RRWHPLPR*ALARCPEDRAG*ESWGVPAGASPRGGNR 124 R+W+PL R CPE R E V + P G+R Sbjct: 595 RQWYPLSRKLRTSCPEPRLLAEEVAVQSAEDPASGSR 631
>CLCN3_RAT (P51792) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_RABIT (O18894) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_MOUSE (P51791) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_CAVPO (Q9R279) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_HUMAN (P51790) Chloride channel protein 3 (ClC-3)| Length = 762 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 144 SLPQEPPRTLTLRDLLDISP 203 SLP E PR L LR +LD+SP Sbjct: 684 SLPAESPRPLKLRSILDMSP 703 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,158,165 Number of Sequences: 219361 Number of extensions: 1674589 Number of successful extensions: 4307 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4297 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
