>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence
          Length = 163674

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 43  aaagcattatgtatgtaggtac 64
           ||||||||||||||||||||||
Sbjct: 830 aaagcattatgtatgtaggtac 809



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 188 aaagcattatgtatgtaggtac 209
           ||||||||||||||||||||||
Sbjct: 830 aaagcattatgtatgtaggtac 809

>gb|AC149325.2| Phakopsora pachyrhizi clone JGIAFNA-13C13, complete sequence
          Length = 36989

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   ttcaagaaataaaaatgtgtg 263
             |||||||||||||||||||||
Sbjct: 11506 ttcaagaaataaaaatgtgtg 11526

>gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 182247

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 243    ttcaagaaataaaaatgtgtg 263
              |||||||||||||||||||||
Sbjct: 158231 ttcaagaaataaaaatgtgtg 158251

>gb|AC097497.2| Homo sapiens BAC clone RP11-324J17 from 4, complete sequence
          Length = 195069

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   caattttcaagaaataaaaat 258
             |||||||||||||||||||||
Sbjct: 71771 caattttcaagaaataaaaat 71751

>ref|XM_631695.1| Dictyostelium discoideum hypothetical protein (DDB0219329), partial
           mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 attttcaagaaataaaaatg 259
           ||||||||||||||||||||
Sbjct: 165 attttcaagaaataaaaatg 184

>gb|AC131767.4| Mus musculus BAC clone RP24-284N10 from chromosome 12, complete
             sequence
          Length = 150631

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   aattttcaagaaataaaaat 258
             ||||||||||||||||||||
Sbjct: 36483 aattttcaagaaataaaaat 36464

>gb|AY615781.1| Encarsia nigricephala strain nig218a 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1,
           complete sequence; and 5.8S ribosomal RNA gene, partial
           sequence
          Length = 536

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 239 aattttcaagaaataaaaat 258
           ||||||||||||||||||||
Sbjct: 453 aattttcaagaaataaaaat 472

>gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome 3, complete sequence
          Length = 180558

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aattttcaagaaataaaaat 258
              ||||||||||||||||||||
Sbjct: 146347 aattttcaagaaataaaaat 146328

>emb|AL160395.24| Human DNA sequence from clone RP11-474D23 on chromosome 13q33.1-34
             Contains a the 3' end of a novel gene (MGC35169) and 2 CpG
             islands, complete sequence
          Length = 179959

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 237   ccaattttcaagaaataaaaatgt 260
             ||||||||||||||| ||||||||
Sbjct: 17635 ccaattttcaagaaagaaaaatgt 17612

>gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186117

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    aattttcaagaaataaaaat 258
              ||||||||||||||||||||
Sbjct: 145603 aattttcaagaaataaaaat 145622

>emb|AL136143.9| Human DNA sequence from clone RP3-399C22 on chromosome 20 Contains a
             putative novel gene, complete sequence
          Length = 87157

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   caaccaattttcaagaaataaaaa 257
             |||||||||||| |||||||||||
Sbjct: 83123 caaccaattttccagaaataaaaa 83146

>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2
          Length = 180915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   aattttcaagaaataaaaat 258
             ||||||||||||||||||||
Sbjct: 93845 aattttcaagaaataaaaat 93864

>emb|BX629341.9| Zebrafish DNA sequence from clone DKEY-46O4 in linkage group 1,
            complete sequence
          Length = 29469

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  taaaaatgtgtgcgtgtaca 271
            ||||||||||||||||||||
Sbjct: 3424 taaaaatgtgtgcgtgtaca 3443

>emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 in linkage group 14,
             complete sequence
          Length = 166625

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   aattttcaagaaataaaaat 258
             ||||||||||||||||||||
Sbjct: 40796 aattttcaagaaataaaaat 40777

>gb|AC108058.2| Homo sapiens BAC clone RP11-379J3 from 2, complete sequence
          Length = 44645

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 239   aattttcaagaaataaaaatgtgt 262
             ||||| ||||||||||||||||||
Sbjct: 32966 aatttacaagaaataaaaatgtgt 32943

>emb|BX088584.14| Mouse DNA sequence from clone RP23-390E22 on chromosome 4, complete
             sequence
          Length = 146527

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   caattttcaagaaataaaaa 257
             ||||||||||||||||||||
Sbjct: 80263 caattttcaagaaataaaaa 80244

>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete
              sequence
          Length = 189879

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aattttcaagaaataaaaat 258
              ||||||||||||||||||||
Sbjct: 189580 aattttcaagaaataaaaat 189561

>gb|AC149341.2| Phakopsora pachyrhizi clone JGIAFNA-25D19, complete sequence
          Length = 38997

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  tcaagaaataaaaatgtgtg 263
            ||||||||||||||||||||
Sbjct: 6515 tcaagaaataaaaatgtgtg 6496

>emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chromosome 2, complete
              sequence
          Length = 173345

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aattttcaagaaataaaaat 258
              ||||||||||||||||||||
Sbjct: 115225 aattttcaagaaataaaaat 115206

>emb|AL672246.8| Mouse DNA sequence from clone RP23-345N9 on chromosome X, complete
             sequence
          Length = 137490

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   aataaaaatgtgtgcgtgta 269
             ||||||||||||||||||||
Sbjct: 46162 aataaaaatgtgtgcgtgta 46181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,077,395
Number of Sequences: 3902068
Number of extensions: 3077395
Number of successful extensions: 68782
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68757
Number of HSP's gapped (non-prelim): 25
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)