ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd12a19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 605 bits (305), Expect = e-170 Identities = 518/589 (87%) Strand = Plus / Plus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 90 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 149 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 150 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 209 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 210 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 269 Query: 210 ccccttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||||||||||||||||||||||| || || || |||||||||||||| || |||||||| Sbjct: 270 ccccttcctcttccccaccaccgggacgggggcgtgggagagcgcgctgacgaacacgct 329 Query: 270 ctccccgggggaccggatcgtgtccttctcgctggggcagttcagcctgctgtggatcga 329 || ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||| Sbjct: 330 gtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcga 389 Query: 330 ccagcagcagcgcctcggcttcagcgtggatgtggtggagtccgactggggctacggcgc 389 ||||||||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 390 ccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgc 449 Query: 390 cgacctcggcgtcctcgagtccaagctccgcagtgactcgcagcacaccatcaaggccat 449 |||||||| || |||||| | |||||||||| ||| | ||| ||||||||||||| Sbjct: 450 cgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccat 509 Query: 450 ctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctccacgccgtgcgcaa 509 ||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| Sbjct: 510 ctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaa 569 Query: 510 gctcctcgatgcgtaccggcacccggcgctgctgctggtggacggggtgtcgtccatctg 569 ||||||| | || ||||||||||||| || ||||||||||||||||| || || || Sbjct: 570 aatcctcgacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatg 629 Query: 570 cgcactggacttccgcatggacgagtggggcgtggacgtggcgctgacg 618 || |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 630 tgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacg 678
>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA Length = 1567 Score = 605 bits (305), Expect = e-170 Identities = 518/589 (87%) Strand = Plus / Plus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 82 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 141 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 142 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 201 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 202 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 261 Query: 210 ccccttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||||||||||||||||||||||| || || || |||||||||||||| || |||||||| Sbjct: 262 ccccttcctcttccccaccaccgggacgggggcgtgggagagcgcgctgacgaacacgct 321 Query: 270 ctccccgggggaccggatcgtgtccttctcgctggggcagttcagcctgctgtggatcga 329 || ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||| Sbjct: 322 gtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcga 381 Query: 330 ccagcagcagcgcctcggcttcagcgtggatgtggtggagtccgactggggctacggcgc 389 ||||||||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 382 ccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgc 441 Query: 390 cgacctcggcgtcctcgagtccaagctccgcagtgactcgcagcacaccatcaaggccat 449 |||||||| || |||||| | |||||||||| ||| | ||| ||||||||||||| Sbjct: 442 cgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccat 501 Query: 450 ctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctccacgccgtgcgcaa 509 ||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| Sbjct: 502 ctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaa 561 Query: 510 gctcctcgatgcgtaccggcacccggcgctgctgctggtggacggggtgtcgtccatctg 569 ||||||| | || ||||||||||||| || ||||||||||||||||| || || || Sbjct: 562 aatcctcgacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatg 621 Query: 570 cgcactggacttccgcatggacgagtggggcgtggacgtggcgctgacg 618 || |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 622 tgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacg 670
>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full insert sequence Length = 1507 Score = 605 bits (305), Expect = e-170 Identities = 518/589 (87%) Strand = Plus / Plus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 90 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 149 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 150 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 209 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 210 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 269 Query: 210 ccccttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||||||||||||||||||||||| || || || |||||||||||||| || |||||||| Sbjct: 270 ccccttcctcttccccaccaccgggacgggggcgtgggagagcgcgctgacgaacacgct 329 Query: 270 ctccccgggggaccggatcgtgtccttctcgctggggcagttcagcctgctgtggatcga 329 || ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||| Sbjct: 330 gtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcga 389 Query: 330 ccagcagcagcgcctcggcttcagcgtggatgtggtggagtccgactggggctacggcgc 389 ||||||||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 390 ccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgc 449 Query: 390 cgacctcggcgtcctcgagtccaagctccgcagtgactcgcagcacaccatcaaggccat 449 |||||||| || |||||| | |||||||||| ||| | ||| ||||||||||||| Sbjct: 450 cgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccat 509 Query: 450 ctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctccacgccgtgcgcaa 509 ||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| Sbjct: 510 ctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaa 569 Query: 510 gctcctcgatgcgtaccggcacccggcgctgctgctggtggacggggtgtcgtccatctg 569 ||||||| | || ||||||||||||| || ||||||||||||||||| || || || Sbjct: 570 aatcctcgacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatg 629 Query: 570 cgcactggacttccgcatggacgagtggggcgtggacgtggcgctgacg 618 || |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 630 tgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacg 678
>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full insert sequence Length = 1567 Score = 605 bits (305), Expect = e-170 Identities = 518/589 (87%) Strand = Plus / Plus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 82 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 141 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 142 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 201 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 202 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 261 Query: 210 ccccttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||||||||||||||||||||||| || || || |||||||||||||| || |||||||| Sbjct: 262 ccccttcctcttccccaccaccgggacgggggcgtgggagagcgcgctgacgaacacgct 321 Query: 270 ctccccgggggaccggatcgtgtccttctcgctggggcagttcagcctgctgtggatcga 329 || ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||| Sbjct: 322 gtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcga 381 Query: 330 ccagcagcagcgcctcggcttcagcgtggatgtggtggagtccgactggggctacggcgc 389 ||||||||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 382 ccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgc 441 Query: 390 cgacctcggcgtcctcgagtccaagctccgcagtgactcgcagcacaccatcaaggccat 449 |||||||| || |||||| | |||||||||| ||| | ||| ||||||||||||| Sbjct: 442 cgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccat 501 Query: 450 ctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctccacgccgtgcgcaa 509 ||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| Sbjct: 502 ctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaa 561 Query: 510 gctcctcgatgcgtaccggcacccggcgctgctgctggtggacggggtgtcgtccatctg 569 ||||||| | || ||||||||||||| || ||||||||||||||||| || || || Sbjct: 562 aatcctcgacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatg 621 Query: 570 cgcactggacttccgcatggacgagtggggcgtggacgtggcgctgacg 618 || |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 622 tgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacg 670
>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full insert sequence Length = 1321 Score = 404 bits (204), Expect = e-109 Identities = 384/444 (86%) Strand = Plus / Plus Query: 175 gacgtgaagaagatcttcaagaccaccaccggcacccccttcctcttccccaccaccggc 234 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gacgtcaagcagatcttcaagaccaccaccggcacccccttcctcttccccaccaccggg 60 Query: 235 accggcgcctgggagagcgcgctcaccaacacgctctccccgggggaccggatcgtgtcc 294 || || || |||||||||||||| || |||||||| || ||||||||| ||||||||| Sbjct: 61 acgggggcgtgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcg 120 Query: 295 ttctcgctggggcagttcagcctgctgtggatcgaccagcagcagcgcctcggcttcagc 354 ||| | | ||||||||||||||||||||||||||||||||||| |||||| ||||| | Sbjct: 121 ttcctgatcgggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaac 180 Query: 355 gtggatgtggtggagtccgactggggctacggcgccgacctcggcgtcctcgagtccaag 414 ||||| ||||||||| |||||||||||||||||||||||||| || |||||| | |||| Sbjct: 181 gtggacgtggtggagagcgactggggctacggcgccgacctcgccgccctcgactacaag 240 Query: 415 ctccgcagtgactcgcagcacaccatcaaggccatctgcatcgtccacaacgagaccgcc 474 |||||| ||| | ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctccgccaggacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgcc 300 Query: 475 accggcgtcaccaacgacctccacgccgtgcgcaagctcctcgatgcgtaccggcacccg 534 || || |||||||||||||| |||||| ||||| ||||||| | || |||||||| Sbjct: 301 actggagtcaccaacgacctttccgccgtccgcaaaatcctcgacaagcacaggcacccg 360 Query: 535 gcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgag 594 ||||| || ||||||||||||||||| || || || || |||||||||||||||| ||| Sbjct: 361 gcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgcatggatgag 420 Query: 595 tggggcgtggacgtggcgctgacg 618 ||||| |||||||||||||||||| Sbjct: 421 tggggagtggacgtggcgctgacg 444
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 301 bits (152), Expect = 1e-78 Identities = 191/204 (93%) Strand = Plus / Minus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 24822869 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 24822810 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 24822809 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 24822750 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 24822749 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 24822690 Query: 210 ccccttcctcttccccaccaccgg 233 |||||||||||||||||||||||| Sbjct: 24822689 ccccttcctcttccccaccaccgg 24822666 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 244 tgggagagcgcgctcaccaacacgctctccccgggggaccggatcgtgtccttctcgctg 303 |||||||||||||| || |||||||| || ||||||||| ||||||||| ||| | | Sbjct: 24822452 tgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcgttcctgatc 24822393 Query: 304 gggcagttcagcctgctgtggatcgaccagcagcagcgcctcggcttcagcgtggatgtg 363 ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| Sbjct: 24822392 gggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaacgtggacgtg 24822333 Query: 364 gtggagtccgactggggctacggcgccgacctcggcgtcctcgagtccaagctccgcagt 423 |||||| |||||||||||||||||||||||||| || |||||| | |||||||||| Sbjct: 24822332 gtggagagcgactggggctacggcgccgacctcgccgccctcgactacaagctccgccag 24822273 Query: 424 gactcgcagcacaccatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtc 483 ||| | ||| |||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 24822272 gacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgccactggagtc 24822213 Query: 484 accaacgacct 494 ||||||||||| Sbjct: 24822212 accaacgacct 24822202 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 527 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 586 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 24822074 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 24822015 Query: 587 tggacgagtggggcgtggacgtggcgctgacg 618 |||| |||||||| |||||||||||||||||| Sbjct: 24822014 tggatgagtggggagtggacgtggcgctgacg 24821983
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 301 bits (152), Expect = 1e-78 Identities = 191/204 (93%) Strand = Plus / Minus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 123670 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 123611 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 123610 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 123551 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 123550 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 123491 Query: 210 ccccttcctcttccccaccaccgg 233 |||||||||||||||||||||||| Sbjct: 123490 ccccttcctcttccccaccaccgg 123467 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 244 tgggagagcgcgctcaccaacacgctctccccgggggaccggatcgtgtccttctcgctg 303 |||||||||||||| || |||||||| || ||||||||| ||||||||| ||| | | Sbjct: 123253 tgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcgttcctgatc 123194 Query: 304 gggcagttcagcctgctgtggatcgaccagcagcagcgcctcggcttcagcgtggatgtg 363 ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| Sbjct: 123193 gggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaacgtggacgtg 123134 Query: 364 gtggagtccgactggggctacggcgccgacctcggcgtcctcgagtccaagctccgcagt 423 |||||| |||||||||||||||||||||||||| || |||||| | |||||||||| Sbjct: 123133 gtggagagcgactggggctacggcgccgacctcgccgccctcgactacaagctccgccag 123074 Query: 424 gactcgcagcacaccatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtc 483 ||| | ||| |||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 123073 gacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgccactggagtc 123014 Query: 484 accaacgacct 494 ||||||||||| Sbjct: 123013 accaacgacct 123003 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 527 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 586 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 122875 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 122816 Query: 587 tggacgagtggggcgtggacgtggcgctgacg 618 |||| |||||||| |||||||||||||||||| Sbjct: 122815 tggatgagtggggagtggacgtggcgctgacg 122784
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 301 bits (152), Expect = 1e-78 Identities = 191/204 (93%) Strand = Plus / Minus Query: 30 ggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaacatccc 89 ||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 27315 ggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatccc 27256 Query: 90 ggaccaggtgatccgcgccatgagcaggcagaacgaggactaccgctcgccggcgatccc 149 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || Sbjct: 27255 ggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcc 27196 Query: 150 tgccctcaccaagaccctcctggaggacgtgaagaagatcttcaagaccaccaccggcac 209 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 27195 cgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcac 27136 Query: 210 ccccttcctcttccccaccaccgg 233 |||||||||||||||||||||||| Sbjct: 27135 ccccttcctcttccccaccaccgg 27112 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 244 tgggagagcgcgctcaccaacacgctctccccgggggaccggatcgtgtccttctcgctg 303 |||||||||||||| || |||||||| || ||||||||| ||||||||| ||| | | Sbjct: 26898 tgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcgttcctgatc 26839 Query: 304 gggcagttcagcctgctgtggatcgaccagcagcagcgcctcggcttcagcgtggatgtg 363 ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| Sbjct: 26838 gggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaacgtggacgtg 26779 Query: 364 gtggagtccgactggggctacggcgccgacctcggcgtcctcgagtccaagctccgcagt 423 |||||| |||||||||||||||||||||||||| || |||||| | |||||||||| Sbjct: 26778 gtggagagcgactggggctacggcgccgacctcgccgccctcgactacaagctccgccag 26719 Query: 424 gactcgcagcacaccatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtc 483 ||| | ||| |||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 26718 gacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgccactggagtc 26659 Query: 484 accaacgacct 494 ||||||||||| Sbjct: 26658 accaacgacct 26648 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 527 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 586 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 26520 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 26461 Query: 587 tggacgagtggggcgtggacgtggcgctgacg 618 |||| |||||||| |||||||||||||||||| Sbjct: 26460 tggatgagtggggagtggacgtggcgctgacg 26429
>gb|AY107617.1| Zea mays PCO084394 mRNA sequence Length = 1016 Score = 157 bits (79), Expect = 5e-35 Identities = 85/87 (97%) Strand = Plus / Plus Query: 528 gcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcat 587 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 60 gcacccggcgctgctgctggtggacggcgtgtcgtccatctgcgcgctggacttccgcat 119 Query: 588 ggacgagtggggcgtggacgtggcgct 614 ||||||||||||||||||||||||||| Sbjct: 120 ggacgagtggggcgtggacgtggcgct 146
>ref|NM_179620.1| Arabidopsis thaliana AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) AT2G13360 (AGT) transcript variant AT2G13360.2 mRNA, complete cds Length = 1470 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 500 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 559 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 560 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 619 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 620 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 675
>ref|NM_126925.2| Arabidopsis thaliana AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) AT2G13360 (AGT) transcript variant AT2G13360.1 mRNA, complete cds Length = 1492 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 522 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 581 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 582 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 641 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 642 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 697
>gb|AY142550.1| Arabidopsis thaliana clone RAFL08-11-L01 (R11180) mRNA sequence Length = 2348 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 1437 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 1496 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 1497 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 1556 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 1557 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 1612
>gb|AY114010.1| Arabidopsis thaliana putative alanine-glyoxylate aminotransferase (At2g13360) mRNA, complete cds Length = 1237 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 409 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 468 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 469 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 528 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 529 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 584
>gb|AY096498.1| Arabidopsis thaliana putative alanine-glyoxylate aminotransferase (At2g13360) mRNA, complete cds Length = 1450 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 477 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 536 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 537 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 596 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 597 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 652
>gb|AY089195.1| Arabidopsis thaliana clone 8306 mRNA, complete sequence Length = 1449 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 479 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 538 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 539 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 598 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 599 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 654
>gb|AF063901.1|AF063901 Arabidopsis thaliana alanine:glyoxylate aminotransferase (AGT) mRNA, complete cds Length = 1452 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 479 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 538 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 539 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 598 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 599 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 654
>dbj|AB048945.1| Arabidopsis thaliana mRNA for serine glyoxylate aminotransferase, complete cds Length = 1424 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgacctc 495 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| ||| || Sbjct: 468 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaatgacatc 527 Query: 496 cacgccgtgcgcaagctcctcgatgcgtaccggcacccggcgctgctgctggtggacggg 555 || || |||| ||||||||| ||| ||| ||||| ||||||| |||||||| Sbjct: 528 tctgctgtccgcacactcctcgatcactacaagcatccggctttgctgctagtggacggt 587 Query: 556 gtgtcgtccatctgcgcactggacttccgcatggacgagtggggcgtggacgtggc 611 || |||||||||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 588 gtttcgtccatctgcgcgcttgatttccgaatggatgagtggggagtggacgtggc 643
>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA, complete cds Length = 1378 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 539 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 598 |||||||||| ||||| |||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 547 tgctgctggttgacggagtgtcgtcaatatgcgcgctcgacttccgtatggacgagtggg 606 Query: 599 gcgtggacgtggcgctgacg 618 | ||||||||||| |||||| Sbjct: 607 gggtggacgtggcactgacg 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 53 ggaaccacctgttcgtccctgggccggtgaacatcccggaccaggtgatccgcgccatga 112 ||||||| || || ||||| || || ||||||||||| || | |||||| |||||||||| Sbjct: 61 ggaaccatctctttgtcccgggacccgtgaacatcccagagccggtgatacgcgccatga 120 Query: 113 gcaggcagaacgaggactaccg 134 ||| | |||||||||||||| Sbjct: 121 acagaaacaacgaggactaccg 142 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 307 cagttcagcctgctgtggatcgaccagcagcagcg 341 ||||||||||| || ||||| |||||||||||||| Sbjct: 315 cagttcagcctcctctggattgaccagcagcagcg 349
>gb|AC007209.6| Arabidopsis thaliana chromosome 2 clone F14O4 map PR1, complete sequence Length = 55345 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 539 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 598 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 47253 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 47312 Query: 599 gcgtggacgtggc 611 | ||||||||||| Sbjct: 47313 gagtggacgtggc 47325 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 436 accatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaa 488 |||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 47067 accatcaaagccatttgcattgtccacaacgagaccgcgaccggagttaccaa 47119
>gb|AY354206.1| Cucumis melo Ananas Yokneam aminotransferase 1 mRNA, complete cds Length = 1206 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 433 cacaccatcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgac 492 |||||||||||||| || ||||| |||||||| ||||| || || |||||||| || ||| Sbjct: 406 cacaccatcaaggcaatttgcattgtccacaatgagacagctactggcgtcactaatgac 465 Query: 493 ct 494 || Sbjct: 466 ct 467 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 cagttcagcctgctgtggatcgaccagcagcagcgcct 344 |||||||| ||||| ||||| || |||||||||||||| Sbjct: 280 cagttcagtctgctctggattgatcagcagcagcgcct 317
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 457 gtccacaacgagaccgccaccggcgtcacc 486 ||||||||||||||| |||||||||||||| Sbjct: 547477 gtccacaacgagacctccaccggcgtcacc 547448 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 529 cacccggcgctgctgctggtggac 552 |||||||||||||||||||||||| Sbjct: 2894509 cacccggcgctgctgctggtggac 2894486
>emb|AJ421476.1|MDI421476 Methylobacterium dichloromethanicum gene for sgaA gene, hprA gene, mtdA gene and ORF DNA (partial) , strain DM4 (DSM6343) Length = 4578 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 55 aaccacctgttcgtccctgggccggtgaacatcccggaccaggtgatccgcgccatga 112 |||||||||||||| || || ||| ||||||||||||| |||||| |||||||||| Sbjct: 1065 aaccacctgttcgttcccggcccgaccaacatcccggaccgggtgatgcgcgccatga 1122
>gb|L27235.1|MTBSERCYC Methylobacterium extorquens serine cycle proteins (sgaA, hprA, and mtdA) genes Length = 3358 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 55 aaccacctgttcgtccctgggccggtgaacatcccggaccaggtgatccgcgccatga 112 |||||||||||||| || || ||| ||||||||||||| |||||| |||||||||| Sbjct: 10 aaccacctgttcgttcccggcccgaccaacatcccggaccgggtgatgcgcgccatga 67
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 213 cttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||| |||||||| ||||||| ||||| | |||||| | |||||| ||||||||||| Sbjct: 154776 cttcatcttcccctccaccgggaccgggggctgggaaaccgcgctgaccaacacgct 154832
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 530 acccggcgctgctgctggtggacg 553 |||||||||||||||||||||||| Sbjct: 1365314 acccggcgctgctgctggtggacg 1365337
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 526 cggcacccggcgctgctgctggtggacg 553 |||||||||||| ||||||||||||||| Sbjct: 5280781 cggcacccggcggtgctgctggtggacg 5280754
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 429 gcagcacaccatcaaggccatctgcatcgtccacaacgagaccgccaccggc 480 ||||||||| |||||||| ||||| |||| |||||||||||| | |||||| Sbjct: 6647936 gcagcacacgatcaaggcggtctgcgtcgtgcacaacgagacctcgaccggc 6647885
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 61347 ccttcctcttccccaccaccggc 61369
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 438 catcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgac 492 |||||||||| | ||| | || |||||||| ||| ||||||||||||||| |||| Sbjct: 96319 catcaaggccgtgtgcgtggtgcacaacgaaacctccaccggcgtcaccagcgac 96265 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccggcaccggcgcctgggag 249 |||||||||||||||||||| Sbjct: 96527 ccggcaccggcgcctgggag 96508
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 438 catcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcaccaacgac 492 |||||||||| | ||| | || |||||||| ||| ||||||||||||||| |||| Sbjct: 14761 catcaaggccgtgtgcgtggtgcacaacgaaacctccaccggcgtcaccagcgac 14707 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccggcaccggcgcctgggag 249 |||||||||||||||||||| Sbjct: 14969 ccggcaccggcgcctgggag 14950
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 1659317 ccttcctcttccccaccaccggc 1659339
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 1706340 ccttcctcttccccaccaccggc 1706362
>dbj|AK103181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121I24, full insert sequence Length = 2233 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 1128 ccttcctcttccccaccaccggc 1106
>dbj|AK059577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A11, full insert sequence Length = 1255 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 165 ccttcctcttccccaccaccggc 143
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 1704061 ccttcctcttccccaccaccggc 1704083
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 1659297 ccttcctcttccccaccaccggc 1659319
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 ccttcctcttccccaccaccggc 234 ||||||||||||||||||||||| Sbjct: 33607 ccttcctcttccccaccaccggc 33585
>gb|AF039000.1|AF039000 Fritillaria agrestis putative serine-glyoxylate aminotransferase (SGA) mRNA, complete cds Length = 1487 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 307 cagttcagcctgctgtggatcgaccagcagcagcgcctc 345 ||||||||||| || |||||||| || |||||||||||| Sbjct: 398 cagttcagccttctctggatcgatcaacagcagcgcctc 436 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 25 aagatggactacatgaatgggccaggccggaaccacctgttcgtccctgggccggtgaac 84 |||||||||||| | ||||||| || |||||||||| || || || ||||| |||||| Sbjct: 116 aagatggactacgtctatgggcctgggaggaaccacctttttgttccagggccagtgaac 175 Query: 85 atcccggaccaggtgatccgcgccatgagcaggcagaacgaggactaccg 134 ||||| || | ||||| || || |||| |||| | ||||| |||||||| Sbjct: 176 atccctgagcccgtgattcgtgcgatgaacaggaacaacgaagactaccg 225
>ref|XM_366755.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02831.4) partial mRNA Length = 1887 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 gcagcagcgcctcggcttcagc 354 |||||||||||||||||||||| Sbjct: 958 gcagcagcgcctcggcttcagc 937
>gb|DQ167250.1| Glycine max enzymatic resistance protein mRNA, complete cds Length = 1517 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 73 gggccggtgaacatcccggaccaggtgatccgcgccatgagcaggcagaacgaggactac 132 |||||||| ||||| ||||||||| | ||||| ||||||| ||| | || ||||||||| Sbjct: 191 gggccggttaacattccggaccagatcatccgggccatgaacagaaacaatgaggactac 250 Query: 133 cg 134 || Sbjct: 251 cg 252
>gb|AY354208.1| Cucumis melo Hemed aminotransferase 1 mRNA, complete cds Length = 1536 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 433 cacaccatcaaggccatctgcatcgtccacaacgagac 470 |||||||||||||| || ||||| |||||||| ||||| Sbjct: 602 cacaccatcaaggcaatttgcattgtccacaatgagac 639 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 cagttcagcctgctgtggatcgaccagcagcagcgcct 344 |||||||| ||||| ||||| || |||||||||||||| Sbjct: 476 cagttcagtctgctctggattgatcagcagcagcgcct 513
>gb|AY066012.1| Cucumis melo aminotransferase 1 mRNA, complete cds Length = 1430 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 433 cacaccatcaaggccatctgcatcgtccacaacgagac 470 |||||||||||||| || ||||| |||||||| ||||| Sbjct: 506 cacaccatcaaggcaatttgcattgtccacaatgagac 543 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 cagttcagcctgctgtggatcgaccagcagcagcgcct 344 |||||||| ||||| ||||| || |||||||||||||| Sbjct: 380 cagttcagtctgctctggattgatcagcagcagcgcct 417
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 219 cttccccaccaccggcaccggcgcct 244 |||| ||||||||||||||||||||| Sbjct: 1818704 cttcaccaccaccggcaccggcgcct 1818679 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 460 cacaacgagaccgccaccggcgtcaccaacgac 492 |||||||||||| |||| ||||| ||||||||| Sbjct: 9743 cacaacgagacctccacgggcgtgaccaacgac 9775 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 589 gacgagtggggcgtggacgtggcg 612 ||||||||||||||||||| |||| Sbjct: 3385942 gacgagtggggcgtggacgcggcg 3385919 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ccaccaccggcaccggcgcc 243 |||||||||||||||||||| Sbjct: 2597680 ccaccaccggcaccggcgcc 2597699
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tgcgcaagctcctcgatgcgt 523 ||||||||||||||||||||| Sbjct: 3026310 tgcgcaagctcctcgatgcgt 3026290
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 438 catcaaggccatctgcatcgtccacaacgagaccgccaccggcgtcacc 486 |||||||||| | ||| | || |||||||| ||| |||||||||||||| Sbjct: 3414510 catcaaggccgtgtgcgtggtgcacaacgaaacctccaccggcgtcacc 3414558 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaagatcttcaagaccac 200 |||||||||||||||||||| Sbjct: 3414244 aagaagatcttcaagaccac 3414263
>gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, complete sequence Length = 192990 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gctcaccaacacgctctcccc 275 ||||||||||||||||||||| Sbjct: 96948 gctcaccaacacgctctcccc 96968
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 589 gacgagtggggcgtggacgtg 609 ||||||||||||||||||||| Sbjct: 1880208 gacgagtggggcgtggacgtg 1880228
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 cagcagcagcgcctcggcttc 351 ||||||||||||||||||||| Sbjct: 45267 cagcagcagcgcctcggcttc 45247
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 tcgaccagcagcagcgcctcg 346 ||||||||||||||||||||| Sbjct: 13456 tcgaccagcagcagcgcctcg 13476
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 580 ttccgcatggacgagtggggcgtggacgt 608 |||| ||||||||| |||||||||||||| Sbjct: 3524899 ttccacatggacgattggggcgtggacgt 3524927 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 213 cttcctcttccccaccaccggcaccggcgcctgggagagcgcgctcaccaacacgct 269 |||| |||||||| |||||||||| |||| ||||| | ||||| ||||||||||| Sbjct: 2617561 cttcatcttcccctccaccggcactggcggttgggaaacggcgctgaccaacacgct 2617617
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cagcagcagcgcctcggcttc 351 ||||||||||||||||||||| Sbjct: 5286551 cagcagcagcgcctcggcttc 5286571 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gccgacctcggcgtcctcga 407 |||||||||||||||||||| Sbjct: 5994444 gccgacctcggcgtcctcga 5994425
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacgg 554 ||||||||||||||||||||| Sbjct: 3004141 ggcgctgctgctggtggacgg 3004121 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 gcgctgctgctggtggacggggtg 558 |||||| ||||||||||||||||| Sbjct: 4608022 gcgctggtgctggtggacggggtg 4608045 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gccgacctcggcgtcctcga 407 |||||||||||||||||||| Sbjct: 3835190 gccgacctcggcgtcctcga 3835171
>dbj|AB117720.1| Rhodococcus rhodochrous orf21, bphC2, orf22, orf23 genes for hypothetical proteins and 2, 3-dihydroxybiphenyl 1, 2-dioxygenase, partial and complete cds Length = 3272 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 570 cgcactggacttccgcatggacgag 594 ||||||| ||||||||||||||||| Sbjct: 281 cgcactgcacttccgcatggacgag 305
>gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene, partial cds; and TrxA (trxA), Orf205, ParB (parB), ParA (parA), GidB (gidB), Jag (jag), Orf431, Orf124, RNase P protein (rnpB), ribosomal protein rpmH (rpmH), DnaA (dnaA), and DnaN (dnaN) genes, complete cds Length = 12198 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cagcagcagcgcctcggcttc 351 ||||||||||||||||||||| Sbjct: 8694 cagcagcagcgcctcggcttc 8714
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 ccaccaccggcaccggcgcct 244 ||||||||||||||||||||| Sbjct: 3609723 ccaccaccggcaccggcgcct 3609703 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 cccggcgctgctgctggtgg 550 |||||||||||||||||||| Sbjct: 151440 cccggcgctgctgctggtgg 151459
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 ggatcgaccagcagcagcgcctcg 346 |||||||||||||||| ||||||| Sbjct: 3173891 ggatcgaccagcagcaccgcctcg 3173868
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cccccttcctcttccccacc 228 |||||||||||||||||||| Sbjct: 68798 cccccttcctcttccccacc 68817
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 ctggtcaccgacgggaaaagcaagatgg 31 |||||||||||||| ||||||| ||||| Sbjct: 1866670 ctggtcaccgacggcaaaagcatgatgg 1866697
>ref|XM_520283.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA C230093N12 (LOC464760), mRNA Length = 3300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 2946 ggcgctgctgctggtggacg 2927
>gb|AF488414.1| Pennisetum glaucum BAC 311G2 complete sequence Length = 123096 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 acgtgaagaagatcttcaag 195 |||||||||||||||||||| Sbjct: 95140 acgtgaagaagatcttcaag 95159
>gb|BT025466.1| Bos taurus family with sequence similarity 102, member A (FAM102A), mRNA, incomplete 5' and 3' cds Length = 515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 442 ggcgctgctgctggtggacg 423
>ref|XM_867838.1| PREDICTED: Bos taurus similar to early estrogen-induced gene 1 protein (LOC615907), mRNA Length = 1144 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 832 ggcgctgctgctggtggacg 813
>ref|XM_954941.1| Neurospora crassa OR74A hypothetical protein (NCU05774.1) partial mRNA Length = 2979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ccttcctcttccccaccacc 231 |||||||||||||||||||| Sbjct: 629 ccttcctcttccccaccacc 610
>ref|XM_325628.1| Neurospora crassa OR74A hypothetical protein (NCU05774.1) partial mRNA Length = 2979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ccttcctcttccccaccacc 231 |||||||||||||||||||| Sbjct: 629 ccttcctcttccccaccacc 610
>ref|NM_203305.2| Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 2, mRNA Length = 3643 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 679 ggcgctgctgctggtggacg 660
>ref|NM_001035254.1| Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 1, mRNA Length = 3844 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 880 ggcgctgctgctggtggacg 861
>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence Length = 191762 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 agcaagatggactacatgaa 41 |||||||||||||||||||| Sbjct: 113256 agcaagatggactacatgaa 113237
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 accagcagcagcgcctcggc 348 |||||||||||||||||||| Sbjct: 543457 accagcagcagcgcctcggc 543438
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 118816 ggcgctgctgctggtggacg 118835
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 acccggcgctgctgctggtggacg 553 ||||||||||||||||| |||||| Sbjct: 289554 acccggcgctgctgctgatggacg 289577
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 acccggcgctgctgctggtggacg 553 ||||||||||||||||| |||||| Sbjct: 293971 acccggcgctgctgctgatggacg 293994
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 530 acccggcgctgctgctggtggacg 553 ||||||||||||||||| |||||| Sbjct: 109026 acccggcgctgctgctgatggacg 109003
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 cggcgccgacctcggcgtcc 403 |||||||||||||||||||| Sbjct: 1574495 cggcgccgacctcggcgtcc 1574476
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 95342 ctcggcttcagcgtggatgt 95323
>ref|NM_078510.2| Drosophila melanogaster Minichromosome maintenance 6 CG4039-RA (Mcm6), mRNA Length = 2784 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 2495 ctcggcttcagcgtggatgt 2476
>gb|AC025187.6| Homo sapiens chromosome 5 clone CTD-2383I20, complete sequence Length = 137219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 acccccttcctcttccccac 227 |||||||||||||||||||| Sbjct: 43210 acccccttcctcttccccac 43191
>gb|AF406936.1|AF406936 Chlamydomonas reinhardtii co-chaperone CGE1 precursor isoform b (CGE1) mRNA, complete cds, alternatively spliced; nuclear gene for chloroplast product Length = 1262 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccaccaccggcacccccttc 216 |||||||||||||||||||| Sbjct: 624 ccaccaccggcacccccttc 643
>gb|AF406935.1|AF406935 Chlamydomonas reinhardtii co-chaperone CGE1 precursor isoform a (CGE1) mRNA, complete cds, alternatively spliced; nuclear gene for chloroplast product Length = 1256 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccaccaccggcacccccttc 216 |||||||||||||||||||| Sbjct: 618 ccaccaccggcacccccttc 637
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagcagcgcctcggcttc 351 |||||||||||||||||||| Sbjct: 1103067 agcagcagcgcctcggcttc 1103048
>ref|XM_697355.1| PREDICTED: Danio rerio hypothetical protein LOC554470 (LOC554470), mRNA Length = 3796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 caccggcgtcaccaacgacc 493 |||||||||||||||||||| Sbjct: 2575 caccggcgtcaccaacgacc 2594
>gb|AY052102.1| Drosophila melanogaster SD04977 full length cDNA Length = 1998 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 1690 ctcggcttcagcgtggatgt 1671
>ref|NM_201087.1| Danio rerio transportin 3 (tnpo3), mRNA Length = 3833 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 caccggcgtcaccaacgacc 493 |||||||||||||||||||| Sbjct: 2575 caccggcgtcaccaacgacc 2594
>gb|AC011603.37| Homo sapiens 12 BAC RP11-386G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tcctcttccccaccaccggc 234 |||||||||||||||||||| Sbjct: 137329 tcctcttccccaccaccggc 137348
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagcagcgcctcggcttc 351 |||||||||||||||||||| Sbjct: 541882 agcagcagcgcctcggcttc 541863
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 213 cttcctcttccccaccaccggcaccggcgcctggga 248 |||| ||| |||| || ||||||||||||||||||| Sbjct: 1108712 cttcatctacccctcctccggcaccggcgcctggga 1108747
>gb|BC045332.1| Danio rerio transportin 3, mRNA (cDNA clone MGC:55409 IMAGE:2602628), complete cds Length = 3833 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 caccggcgtcaccaacgacc 493 |||||||||||||||||||| Sbjct: 2575 caccggcgtcaccaacgacc 2594
>gb|AY108506.1| Zea mays PCO140287 mRNA sequence Length = 637 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gatcttcaagaccaccaccg 205 |||||||||||||||||||| Sbjct: 66 gatcttcaagaccaccaccg 47
>gb|AF139532.1|AF139532 Liquidambar styraciflua aldehyde 5-hydroxylase (Ald5H) mRNA, complete cds Length = 1883 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 cgccgacctcggcgtcctcg 406 |||||||||||||||||||| Sbjct: 1238 cgccgacctcggcgtcctcg 1219
>gb|AF124744.1|AF124744 Drosophila melanogaster DNA replication factor MCM6 (Mcm6) mRNA, complete cds Length = 2743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 2435 ctcggcttcagcgtggatgt 2416
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 137229 ctcggcttcagcgtggatgt 137210
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ccggcgtcaccaacgacctc 495 |||||||||||||||||||| Sbjct: 363308 ccggcgtcaccaacgacctc 363327
>gb|BC047949.1| Homo sapiens family with sequence similarity 102, member A, mRNA (cDNA clone IMAGE:5763298) Length = 3398 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 679 ggcgctgctgctggtggacg 660
>gb|BC039197.2| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2, mRNA (cDNA clone IMAGE:4180948), partial cds Length = 4008 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tcctcttccccaccaccggc 234 |||||||||||||||||||| Sbjct: 1381 tcctcttccccaccaccggc 1400
>gb|L38606.1|PMNRGOF Phytomonas sp. (isolate French-Guiana; host Euphorbia hyssopifolia) 16S-like ribosomal RNA (rRNA) gene Length = 328 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 caccaccggcaccggcgcct 244 |||||||||||||||||||| Sbjct: 251 caccaccggcaccggcgcct 270
>gb|L38601.1|PMNRGOB Phytomonas sp. (isolate Ecuador; host Euphorbia hyssopifolia) small subunit ribosomal RNA (rRNA) gene Length = 345 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 caccaccggcaccggcgcct 244 |||||||||||||||||||| Sbjct: 268 caccaccggcaccggcgcct 287
>dbj|AB010108.1| Drosophila melanogaster mRNA for MCM6, complete cds Length = 2715 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcggcttcagcgtggatgt 362 |||||||||||||||||||| Sbjct: 2423 ctcggcttcagcgtggatgt 2404
>dbj|AK074108.1| Homo sapiens mRNA for FLJ00179 protein Length = 4319 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ggcgctgctgctggtggacg 553 |||||||||||||||||||| Sbjct: 274 ggcgctgctgctggtggacg 255 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,381,296 Number of Sequences: 3902068 Number of extensions: 4381296 Number of successful extensions: 108805 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104830 Number of HSP's gapped (non-prelim): 3965 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
