ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd11g11 |
|---|---|
| Clone Library Name | barley_pub |
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 348 bits (893), Expect(2) = e-100 Identities = 171/185 (92%), Positives = 179/185 (96%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 ERVVLRVDGGFRSG DVL+AAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE Sbjct: 1190 ERVVLRVDGGFRSGQDVLIAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 1249 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 ELRARFPGVPGDLVNYFLFVAEEVRA LAQLGYEKLDDIIGRTDLL+PKHISLVKTQHID Sbjct: 1250 ELRARFPGVPGDLVNYFLFVAEEVRAALAQLGYEKLDDIIGRTDLLKPKHISLVKTQHID 1309 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L YLL N+GLP+WSSSQIRSQDVH+NGPVLDETILADPE++DAIENEKEVSK + IYNVD Sbjct: 1310 LGYLLSNAGLPEWSSSQIRSQDVHTNGPVLDETILADPEIADAIENEKEVSKAFQIYNVD 1369 Query: 554 RAVCG 568 RAVCG Sbjct: 1370 RAVCG 1374 Score = 36.6 bits (83), Expect(2) = e-100 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +3 Query: 570 RVAGAIAKKYGDTGFAG 620 RVAG IAKKYGDTGFAG Sbjct: 1375 RVAGVIAKKYGDTGFAG 1391
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 303 bits (775), Expect(2) = 2e-86 Identities = 144/185 (77%), Positives = 170/185 (91%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 ERV+LRVDGG + G+DV++AAAMGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQRE Sbjct: 1093 ERVILRVDGGLKCGVDVMMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQRE 1152 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 ELRARFPGVPGDLVN+FL+VAEEVR LAQLG+EKLDDIIGRTD+L+P+ ISL+KTQH+D Sbjct: 1153 ELRARFPGVPGDLVNFFLYVAEEVRGILAQLGFEKLDDIIGRTDILKPRDISLMKTQHLD 1212 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L+Y+L ++GLP SS+ IR Q+VH+NGPVLD+ IL+DPE+ DAIENEK V+KT I+NVD Sbjct: 1213 LSYILASAGLPTMSSTAIRKQEVHTNGPVLDDQILSDPEIIDAIENEKIVNKTVKIFNVD 1272 Query: 554 RAVCG 568 RAVCG Sbjct: 1273 RAVCG 1277 Score = 36.2 bits (82), Expect(2) = 2e-86 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 Query: 570 RVAGAIAKKYGDTGFAG 620 R+AG IAKKYGDTGFAG Sbjct: 1278 RIAGVIAKKYGDTGFAG 1294
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 302 bits (773), Expect(2) = 4e-86 Identities = 146/185 (78%), Positives = 169/185 (91%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 ERV++RVDGGF+SG+DVL+AAAMGADEYGFG++AMIATGC+MARICHTNNCPVGVASQRE Sbjct: 1200 ERVIIRVDGGFKSGVDVLIAAAMGADEYGFGTLAMIATGCIMARICHTNNCPVGVASQRE 1259 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 ELRARFPG+PGDLVN+FL++AEEVR LAQLGYEKLDDIIGRTDLL+ + ISLVKT H+D Sbjct: 1260 ELRARFPGLPGDLVNFFLYIAEEVRGILAQLGYEKLDDIIGRTDLLKARDISLVKT-HLD 1318 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L+YLL + GLPK SS+ IR Q+VHSNGPVLD+T+L DPE+ DAIENEK V KT IYNVD Sbjct: 1319 LSYLLSSVGLPKRSSTSIRKQEVHSNGPVLDDTLLQDPEIMDAIENEKTVHKTMSIYNVD 1378 Query: 554 RAVCG 568 R+VCG Sbjct: 1379 RSVCG 1383 Score = 36.2 bits (82), Expect(2) = 4e-86 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 Query: 570 RVAGAIAKKYGDTGFAG 620 R+AG IAKKYGDTGFAG Sbjct: 1384 RIAGVIAKKYGDTGFAG 1400
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 299 bits (765), Expect(2) = 3e-85 Identities = 147/185 (79%), Positives = 164/185 (88%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 ERV+LRVDGG +SG+DVL+AAAMGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQRE Sbjct: 1224 ERVILRVDGGLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQRE 1283 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 ELRARFPGVPGDLVNYFL+VAEEVR LAQLGY LDDIIGRT+LL+P+ ISLVKTQH+D Sbjct: 1284 ELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTELLRPRDISLVKTQHLD 1343 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L+YLL + G P SS++IR Q+VH+NGPVLD+ ILADP V DAIENEK V KT I NVD Sbjct: 1344 LSYLLSSVGTPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVD 1403 Query: 554 RAVCG 568 RA CG Sbjct: 1404 RAACG 1408 Score = 36.6 bits (83), Expect(2) = 3e-85 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +3 Query: 570 RVAGAIAKKYGDTGFAG 620 RVAG IAKKYGDTGFAG Sbjct: 1409 RVAGVIAKKYGDTGFAG 1425
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 219 bits (557), Expect(2) = 2e-59 Identities = 108/184 (58%), Positives = 140/184 (76%), Gaps = 1/184 (0%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 +RV+LR DGG ++G DV++AA MGA+EYGFGS+AMIA GC+MAR+CHTNNCPVGVA+Q+E Sbjct: 1134 DRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQE 1193 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPK-HISLVKTQHI 370 LR RF GVPG +VN+F F+AEEVR+ LA LGY LDDIIGRTDLL+ + + L KTQ++ Sbjct: 1194 RLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDVQLSKTQNL 1253 Query: 371 DLAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNV 550 L LL N K + + + VHSNGPVLD+ ILADP++ +AI ++ +KTY + N Sbjct: 1254 TLDCLL-NLPDTKQNRQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATKTYRLVNT 1312 Query: 551 DRAV 562 DR V Sbjct: 1313 DRTV 1316 Score = 30.0 bits (66), Expect(2) = 2e-59 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +3 Query: 570 RVAGAIAKKYGDTGFAG 620 R++GAIAKKYG+ GF G Sbjct: 1319 RLSGAIAKKYGNNGFEG 1335
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 204 bits (519), Expect = 2e-52 Identities = 106/184 (57%), Positives = 136/184 (73%), Gaps = 1/184 (0%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 +RV LRVDGG R+G D++LAA MGA+E+GFG++AMIATGC+MARICHTN CPVGVA+QRE Sbjct: 1123 DRVTLRVDGGLRTGSDIVLAAIMGAEEFGFGTIAMIATGCIMARICHTNKCPVGVATQRE 1182 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLL-QPKHISLVKTQHI 370 ELRARF GVP LVN+FLF+ EVR LA LGY+ LD+I G+ LL + I L KT+ I Sbjct: 1183 ELRARFSGVPEALVNFFLFIGNEVREILASLGYKSLDEITGQNHLLIKNTDIELAKTRGI 1242 Query: 371 DLAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNV 550 +L L+ N W+ + VH+NGPV+D+ ILA PE++DAI+ E EV+K + I N Sbjct: 1243 ELNSLI-NINTHTWT----KFNSVHTNGPVMDDDILAIPEINDAIKLENEVAKHFKIANT 1297 Query: 551 DRAV 562 +R V Sbjct: 1298 NRTV 1301
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 204 bits (518), Expect = 2e-52 Identities = 95/183 (51%), Positives = 138/183 (75%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 E+V+LRVDGG R+G D+++AA MGA+E+GFG+VAMIATGCVMAR+CHTNNCPVGVA+QR+ Sbjct: 1119 EKVILRVDGGLRTGKDIIIAALMGAEEFGFGTVAMIATGCVMARVCHTNNCPVGVATQRQ 1178 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 +LR RFPG+P D+VN+F+FVAEEVR LA+LGY+ L+++IG DL + K I L KT++++ Sbjct: 1179 DLRNRFPGIPSDVVNFFIFVAEEVREILAELGYKSLEELIGLNDLFKVKDIELSKTKNLN 1238 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L L + + + +++ + VH+NG VLD+ +L+ + +AI + + + I N D Sbjct: 1239 LNILFNSINMNRNLIPKLKHKTVHTNGNVLDDILLSKSNIINAINLQSNIVQDIEILNTD 1298 Query: 554 RAV 562 R V Sbjct: 1299 RCV 1301
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 173 bits (439), Expect = 3e-43 Identities = 92/187 (49%), Positives = 132/187 (70%), Gaps = 4/187 (2%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 E+V+LRVDGG R+G DV++AA +GADEYGFG++AMIA GC+MAR+CHTN+CPVGVA+Q+E Sbjct: 1130 EKVILRVDGGLRTGQDVVMAALLGADEYGFGTIAMIAGGCIMARVCHTNSCPVGVATQKE 1189 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPK-HISLVKTQHI 370 ELR R+PGVP ++VNYF+F+AEE+R L++LG+E L IIGR DL+ L KT I Sbjct: 1190 ELRMRYPGVPENVVNYFIFLAEEIRVILSKLGFETLSQIIGRKDLINHNFDKKLCKTHCI 1249 Query: 371 DLAYLLMNSGLPKWSSSQI---RSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPI 541 D + + N +++ +I S+ + ++ +LD +L ++ AI+N K + K I Sbjct: 1250 DTS-IFFNIKTNEYNFLEIPGGHSKKLKTS--LLDYELLNSSDILYAIDNHKTLEKHIKI 1306 Query: 542 YNVDRAV 562 N DR+V Sbjct: 1307 SNSDRSV 1313
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 137 bits (344), Expect = 3e-32 Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 1/183 (0%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREE 196 R+V+ DG ++G DV +AA +GA+E+GF + +++ GC+M R CH N CPVG+A+Q E Sbjct: 1112 RIVVETDGQMKTGRDVAIAALLGAEEFGFSTAPLVSLGCIMMRACHLNTCPVGIATQNPE 1171 Query: 197 LRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKH-ISLVKTQHID 373 LRA+F G P VN+ F+A E+R +AQLG+ +++++GRTD+L+PK ++ K + ID Sbjct: 1172 LRAKFTGDPAHAVNFMTFIATELREVMAQLGFRTINEMVGRTDILEPKKAVAHWKAKGID 1231 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 L+ +L + + H LD T L D AI ++V+ T PI N++ Sbjct: 1232 LSTILHQPEVGDDVGRYCQIPQDHGLQHSLDITQLLD-LCQPAIAKGEKVTATLPITNIN 1290 Query: 554 RAV 562 R V Sbjct: 1291 RVV 1293
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 135 bits (341), Expect = 7e-32 Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 3/184 (1%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQRE 193 +RVVL DG +G DV++AA +GA+E+GF + ++ GCVM R CH + CPVGVA+Q Sbjct: 1074 DRVVLETDGKLMTGRDVVMAALLGAEEFGFATAPLVVLGCVMMRACHLDTCPVGVATQNP 1133 Query: 194 ELRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLV--KTQH 367 ELR +F G P +VNY LF+AEEVR +A LG++ D++IGRTD+L + K Sbjct: 1134 ELRKKFMGDPDHIVNYMLFIAEEVREYMAALGFKTFDEMIGRTDVLHASERAKEHWKASQ 1193 Query: 368 IDLAYLLMN-SGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIY 544 +DL+ LL G+ + S Q H LD T + P V +AIE+ KE + I Sbjct: 1194 LDLSTLLYQPEGVRTFQSPQ-----NHKIDQSLDITTIL-PAVQEAIESGKEADISIEIN 1247 Query: 545 NVDR 556 N +R Sbjct: 1248 NTNR 1251
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 128 bits (322), Expect = 1e-29 Identities = 72/182 (39%), Positives = 103/182 (56%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREE 196 RV LR DGG ++G D+++AA +GA+E+G G+ ++IA GC+M R CH+N CPVGV Q ++ Sbjct: 1100 RVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDK 1159 Query: 197 LRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHIDL 376 LR +F G P +VN F F+AEEVR LA LG+ L+++IGRTDLL +DL Sbjct: 1160 LRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRTDLLHQVSRGAEHLDDLDL 1219 Query: 377 AYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVDR 556 L P ++ Q + LD I+AD E +++ Y N R Sbjct: 1220 NPRLAQVD-PGENARYCTLQGRNEVPDTLDARIVAD--ARPLFEEGEKMQLAYNARNTQR 1276 Query: 557 AV 562 A+ Sbjct: 1277 AI 1278
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 124 bits (312), Expect = 2e-28 Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 2/162 (1%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREE 196 RVV++ DG R+G DV +A +GA+E+GF + +IA GC+M R CH N CPVG+A+Q E Sbjct: 1154 RVVIQTDGQIRTGRDVAIACLLGAEEWGFATTPLIALGCIMMRKCHLNTCPVGIATQDPE 1213 Query: 197 LRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHIDL 376 LR +F G P +VN+F +VAEE+R +A+LG+ +++++GR+D L+ K++ +DL Sbjct: 1214 LRKKFEGQPEHVVNFFYYVAEELRGIMAKLGFRTINEMVGRSDKLKVAEPINNKSKLLDL 1273 Query: 377 AYLLMNSGL--PKWSSSQIRSQDVHSNGPVLDETILADPEVS 496 LL + P ++ +R QD H LD ++ + EV+ Sbjct: 1274 TPLLTPAFTLRPGAATYNVRKQD-HRLYTRLDNKLIDEAEVT 1314
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 124 bits (310), Expect = 3e-28 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 5/187 (2%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREE 196 R L+ DG ++G DV +AA +GA+EYGF + +I GC+M R CH N CPVG+A+Q Sbjct: 1208 RTTLQTDGQLKTGRDVAIAALLGAEEYGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPV 1267 Query: 197 LRARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQ-PKHI--SLVKTQH 367 LR +F G P ++N+F VAEE+R ++QLG+ +++++GR+D+L+ K + K ++ Sbjct: 1268 LREKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGRSDMLEVDKEVVKGNAKLEN 1327 Query: 368 IDLAYLLMNSG--LPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPI 541 IDL+ LL + P+ + ++ QD H LD +++ A+E V PI Sbjct: 1328 IDLSLLLRPAAELRPEAAQYCVQKQD-HGLDMALDNKLISLSNA--ALEKGLPVYIETPI 1384 Query: 542 YNVDRAV 562 N +RAV Sbjct: 1385 CNTNRAV 1391
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 117 bits (294), Expect = 2e-26 Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 4/186 (2%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREE 196 ++ L+VDGG ++G+D++ AA +GA+ +GFG+ M+A GC RICH NNC GVA+Q ++ Sbjct: 1095 KIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDK 1154 Query: 197 LRA-RFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHID 373 LR + G+P + NYF F+A E R +AQLG +L D+IGRTDLL+ K Q + Sbjct: 1155 LRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLA 1214 Query: 374 LAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDA---IENEKEVSKTYPIY 544 L+ LL + ++ N P D +L + A ++ + + + I Sbjct: 1215 LSKLLETA-----EPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIR 1269 Query: 545 NVDRAV 562 N DR+V Sbjct: 1270 NTDRSV 1275
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 109 bits (272), Expect = 7e-24 Identities = 60/189 (31%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Frame = +2 Query: 20 VVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREEL 199 VV++ DG R+G D+ +A +GA+ + +V +IA GCVM R CH N+C VG+A+Q L Sbjct: 1147 VVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLNSCAVGIATQDPYL 1206 Query: 200 RARFPGVPGDLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHIDLA 379 R++F G P ++N+F ++ +++R +A+LG+ +D+++G ++ L+ + K +IDL+ Sbjct: 1207 RSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEMVGHSEKLKKRDDVNAKAINIDLS 1266 Query: 380 YLLMNSGL--PKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVD 553 +L + + P + + QD H LD ++ + EV+ ++ V+ I N D Sbjct: 1267 PILTPAHVIRPGVPTKFTKKQD-HKLHTRLDNKLIDEAEVT--LDRGLPVNIDASIINTD 1323 Query: 554 RAVCGPCSW 580 RA+ S+ Sbjct: 1324 RALGSTLSY 1332
>GLUS_METJA (Q58746) Glutamate synthase (EC 1.4.1.13)| Length = 510 Score = 58.2 bits (139), Expect = 2e-08 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 2/101 (1%) Frame = +2 Query: 38 GGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPG 217 GG R DV A A+GAD G+ AM+A GC + C+T C G+A+QR EL R Sbjct: 391 GGIRCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDP 450 Query: 218 VPG--DLVNYFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQ 334 G + N E++ L G ++ + G D L+ Sbjct: 451 EVGARRVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLR 491
>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein| Length = 442 Score = 40.4 bits (93), Expect = 0.004 Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Frame = +2 Query: 17 RVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATG----------------CVMARI 148 +V L V GG RSG DV A A+GAD G+ A++A G Sbjct: 295 KVQLVVSGGIRSGADVAKALALGADAVAIGTAALVAIGDNDPHWEEEYQKLGTTAGAYDD 354 Query: 149 CHTNNCPVGVASQREELRARFPGVPGD--LVNYFLFVAEEVRATLAQLGYEKLDDI 310 H P G+ +Q EL R V L NY + E + G L ++ Sbjct: 355 WHEGKDPAGITTQDPELMKRLDPVAAGRRLANYLKVMTLEAQTIARACGKNHLHNL 410
>CYB2_YEAST (P00175) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)| (L-lactate dehydrogenase [Cytochrome]) (L-lactate ferricytochrome C oxidoreductase) (L-LCR) Length = 591 Score = 33.5 bits (75), Expect = 0.52 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGC 133 +++ + VDGG R G DVL A +GA G G + A C Sbjct: 482 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSC 521
>LLDD_CAUCR (Q9A943) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 383 Score = 32.7 bits (73), Expect = 0.88 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +2 Query: 5 ARGERVVLRVDGGFRSGLDVLLAAAMGA 88 A G+R+ + DGG RSGLDV+ A+GA Sbjct: 296 AVGDRLTVLADGGVRSGLDVVRMLALGA 323
>RUVB_WOLPM (P61539) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 326 Score = 32.0 bits (71), Expect = 1.5 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 9/99 (9%) Frame = +2 Query: 293 EKLDDIIGRTDLLQPKHISL----VKTQHIDLAYLLMNSGLPKWSSSQIRSQDVH----- 445 E+LDD +G+ DL+Q + + +T+ +D L GL K + +QI S+++ Sbjct: 22 EQLDDFVGQKDLIQNLKVFINAAQTRTEALDHVLLYGPPGLGKTTLAQIVSKELRVSFRA 81 Query: 446 SNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVDRAV 562 ++GP+L + D N K+V I+ ++R++ Sbjct: 82 TSGPLLSKA--GDLAAVLTTLNAKDVLFIDEIHRLNRSI 118
>APOA5_HUMAN (Q6Q788) Apolipoprotein A-V precursor (Apolipoprotein A5) (ApoAV)| (ApoA-V) (Regeneration-associated protein 3) Length = 366 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -2 Query: 527 LKPLSHSQLHRIPQDPQGLSRQEQ 456 L+PLS S+ R+PQDP G+ RQ Q Sbjct: 74 LRPLSGSEAPRLPQDPVGMRRQLQ 97
>RUVB_WOLTR (Q5GT33) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 326 Score = 31.2 bits (69), Expect = 2.6 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 9/112 (8%) Frame = +2 Query: 254 AEEVRATLAQLGYEKLDDIIGRTDLLQ--PKHISLVKTQHIDLAYLLMNS--GLPKWSSS 421 AE+VR + E+LDD G+ DL+Q I+ KT+ L ++L++ GL K + + Sbjct: 11 AEDVRNL--NIRPEQLDDFFGQKDLIQNLKVFINAAKTRTEALDHVLLHGPPGLGKTTLA 68 Query: 422 QIRSQDVH-----SNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVDRAV 562 QI S+++ ++GP+L++ D N K+V I+ ++R++ Sbjct: 69 QIISKELRVSFRATSGPLLNKA--GDLAAVLTTLNAKDVLFIDEIHRLNRSI 118
>DEOC_AERPE (Q9Y948) Probable deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 235 Score = 30.8 bits (68), Expect = 3.4 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 26 LRVDGGFRSGLDVLLAAAMGADEYGFGSVAMI 121 ++ GG RSG+D +LA GAD G S + Sbjct: 196 VKASGGIRSGIDAVLAVGAGADIIGTSSAVKV 227
>CYB2_HANAN (P09437) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)| (L-lactate dehydrogenase [Cytochrome]) (L-lactate ferricytochrome C oxidoreductase) (L-LCR) Length = 573 Score = 30.8 bits (68), Expect = 3.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 14 ERVVLRVDGGFRSGLDVLLAAAMGADEYGFG 106 +++ + VDGG R G DVL A +GA G G Sbjct: 461 QKIDIFVDGGVRRGTDVLKALCLGAKGVGLG 491
>END4_OCEIH (Q8EPZ2) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 297 Score = 30.8 bits (68), Expect = 3.4 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 5/147 (3%) Frame = +2 Query: 50 SGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPV---GVASQREELRARFPGV 220 +G +LL ++ A +YG + MI TG +T P+ + + E ++A G+ Sbjct: 11 NGKKMLLGSSEDAVQYG-ANTFMIYTGAPQ----NTRRKPIEELNIEAGTEHMKAN--GI 63 Query: 221 PGDLVN--YFLFVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHIDLAYLLMN 394 +V+ Y + + ++ +LG L + I RT+ L K I L H+ Sbjct: 64 QDIVVHAPYIINIGNSIKPATFELGVNFLKNEIDRTEALGAKQIVLHPGAHVGEG---AE 120 Query: 395 SGLPKWSSSQIRSQDVHSNGPVLDETI 475 G+PK D +SN + ET+ Sbjct: 121 KGIPKIIEGLNEVLDPNSNVQIALETM 147
>LA2M_MYCSM (P21795) Lactate 2-monooxygenase (EC 1.13.12.4) (Lactate oxidase)| Length = 393 Score = 30.4 bits (67), Expect = 4.4 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +2 Query: 5 ARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFG 106 A G+ VL D G R+G DV+ A AMGA G G Sbjct: 311 ASGDTPVL-FDSGIRTGADVVKALAMGASAVGIG 343
>ALR2_VIBCH (Q9KSE5) Alanine racemase 2 (EC 5.1.1.1)| Length = 392 Score = 30.0 bits (66), Expect = 5.7 Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 5/167 (2%) Frame = +2 Query: 68 LAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFL 247 + A M AD YG G ++ T C VGVAS E R G G+L+ Sbjct: 54 ICAIMKADAYGNGIRGLMPTIIAQGIPC------VGVASNAEARAVRESGFKGELIRVRS 107 Query: 248 FVAEEVRATLAQLGYEKLDDIIGRTDLLQPKHISLVKTQHIDLAYLLMNSGLPKWSSSQI 427 E+ + L ++++IG Q +DLA L SG + Sbjct: 108 ASLSEMSSALDL----NIEELIG------------THQQALDLAELAKQSGKTLKVHIAL 151 Query: 428 RSQDVHSNGPVLDETILADPEVSDAIENEKEVSKT-----YPIYNVD 553 + NG +D T A + + +I + +S +P YN D Sbjct: 152 NDGGMGRNG--IDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNAD 196
>IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico) (dIRS)| Length = 968 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = +2 Query: 392 NSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSKTYPIYNVDRAVC 565 N KW RS++ SN P+ D T + P N + SK++ +++ ++ C Sbjct: 693 NISAEKWREQPSRSEEKKSNSPLNDNTFSSKP------TNVESTSKSHDVHSANQIDC 744
>LLDD_PSEAE (Q9HV37) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 30.0 bits (66), Expect = 5.7 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G R+GLDV+ A+GAD G + A Sbjct: 296 AVKGELAIL-ADSGIRTGLDVVRMIALGADSVLLGRAFVYA 335
>LLDD_XANOR (Q5H6Z4) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGELKIL-ADSGIRSGLDVVRMLALGADAVLLGRAFVYA 335
>LLDD_XANCP (Q8PE75) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGELKIL-ADSGIRSGLDVVRMLALGADAVLLGRAFVYA 335
>LLDD_XANC8 (Q4V0H2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGELKIL-ADSGIRSGLDVVRMLALGADAVLLGRAFVYA 335
>LLDD_XANC5 (Q3BZH2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGELKIL-ADSGIRSGLDVVRMLALGADAVLLGRAFVYA 335
>LLDD_XANAC (Q8PR33) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 388 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +GE +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGELKIL-ADSGIRSGLDVVRMLALGADAVLLGRAFVYA 335
>EXOS8_HUMAN (Q96B26) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 43) (Exosome component 8) (p9) (Opa-interacting protein 2) Length = 276 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 371 DLAYLLMNSGLPKWSSSQIRSQDVHSNGPVLDETILADPEVSDAIENEKEVSK 529 D Y++ N LP SS+ RS GP +E +A ++D IEN + + K Sbjct: 75 DKGYVVPNVDLPPLCSSRFRS------GPPGEEAQVASQFIADVIENSQIIQK 121
>SAHH_BORPE (Q7VUL8) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 472 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 144 AFATQTIAQLELLVREKSYALG 209 +FA QTIAQ+EL R ++Y G Sbjct: 400 SFANQTIAQIELFTRNEAYTTG 421
>SAHH_BORPA (Q7W1Z7) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 472 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 144 AFATQTIAQLELLVREKSYALG 209 +FA QTIAQ+EL R ++Y G Sbjct: 400 SFANQTIAQIELFTRNEAYTTG 421
>SAHH_BORBR (Q7WQX5) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 472 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 144 AFATQTIAQLELLVREKSYALG 209 +FA QTIAQ+EL R ++Y G Sbjct: 400 SFANQTIAQIELFTRNEAYTTG 421
>LLDD_ACIAD (Q6FFS1) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 384 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +G+ +L D G R+GLDV+ A+GAD G + A Sbjct: 296 AVKGDLTIL-ADSGIRNGLDVVRMLALGADSVMLGRAFIYA 335
>LLDD_PSEPK (Q88DT3) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 381 Score = 29.3 bits (64), Expect = 9.8 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + +G+ +L D G RSGLDV+ A+GAD G + A Sbjct: 296 AVKGDLKIL-ADSGIRSGLDVVRMIALGADTVLIGRAFLYA 335
>IDI2_NOCFA (Q5YXN4) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 362 Score = 29.3 bits (64), Expect = 9.8 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYG 100 SA + L GG RS LDV A A+GAD G Sbjct: 246 SAEVTGIALVASGGIRSPLDVAKALALGADATG 278
>LLDD_ERWCT (Q6DAY3) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 386 Score = 29.3 bits (64), Expect = 9.8 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 20 VVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + + D G RSGLDV+ A+GAD G + A Sbjct: 301 ITILADSGIRSGLDVVRMIALGADGVMLGRAFVYA 335
>LLDD_BARHE (Q6G4R2) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)| Length = 383 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 20 VVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 + + VD G RSGLDV+ A GAD G + A Sbjct: 301 LTILVDSGVRSGLDVVRMIAQGADAVMIGRAFVYA 335
>IDI2_SULTO (Q96YW9) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 369 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 38 GGFRSGLDVLLAAAMGADEYGFGSVAMIA 124 GG R+GL+V A A+GAD GF A+ A Sbjct: 274 GGVRNGLEVAKAIALGADIGGFALPALKA 302
>IDI2_PELLD (Q3B213) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 361 Score = 29.3 bits (64), Expect = 9.8 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 2 SARGERVVLRVDGGFRSGLDVLLAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVA 181 +A G + GG SGLD+ + A+GAD + A+ + R H + Sbjct: 276 TAGGRPFSIIASGGIHSGLDIAKSIALGAD--------LAASAGALLRALHHGTLEATIT 327 Query: 182 SQREELRA 205 + ++LRA Sbjct: 328 AWLQDLRA 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,950,262 Number of Sequences: 219361 Number of extensions: 1952663 Number of successful extensions: 5849 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5843 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
